Lcy08g012830 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g012830
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	BEST Arabidopsis thaliana protein match is: s in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Location	Chr08: 42212236 .. 42212914 (-)
RNA-Seq Expression	Lcy08g012830
Synteny	Lcy08g012830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGAACTCATACAAAGTTTCCACAAACTCAAACTCCCATAAAACCAATCAAATCCCCATTCAAATTCAATCAAATTCTGTCACTTTCTCGGGAAAACGAGAGAAAATGGATGGAAAATTTCATTGGGATATGAAGAACAAAGTCATATCAAGAACCTCTTCAGTTGGTTATTCTTCTCGCAGTATTTACTATTGTGGAACAGTTGAAGGAGTTCCTTTCAAATGGGAAACACAACCAGGAACTCCCAAAGATCCACCCCCTCAGGAGTTGCTTCCACCTCTCAGCCCTCCGCCGGCAGTTCTCAGCCTCGGGTTACCGAAACCGTGCATCGAACAACCGAAAATCCGACCTCGACCCCGGATGAGGCTTAGGTTTTGGAGGAGAAGCAAGAAGAGTAGGGAGAGTGAGAGAGTTGCCCAAGCAACAACTATTGACTATAGCAATGGAGATCCTTTTGGTCACTATGATAAGTTGGAAACTTCTTCATTTCTTAGCTCTGAATGCGAGTTCATGGCGTCTCCTCGAAATTCAATGTCGTCGTCGTCTTCTTCTTCTTCATCGCCATCATCTTTGCTTGAGTCGTTAACCGTACGAAATGTGGGGAGGGTGTCATTTGGAAGGCCTCCGTGTTGCAGTGCTTGGCAAATTAATCGAATTCTAACTTGTTACCATTGCTAG

mRNA sequence

CTTGAACTCATACAAAGTTTCCACAAACTCAAACTCCCATAAAACCAATCAAATCCCCATTCAAATTCAATCAAATTCTGTCACTTTCTCGGGAAAACGAGAGAAAATGGATGGAAAATTTCATTGGGATATGAAGAACAAAGTCATATCAAGAACCTCTTCAGTTGGTTATTCTTCTCGCAGTATTTACTATTGTGGAACAGTTGAAGGAGTTCCTTTCAAATGGGAAACACAACCAGGAACTCCCAAAGATCCACCCCCTCAGGAGTTGCTTCCACCTCTCAGCCCTCCGCCGGCAGTTCTCAGCCTCGGGTTACCGAAACCGTGCATCGAACAACCGAAAATCCGACCTCGACCCCGGATGAGGCTTAGGTTTTGGAGGAGAAGCAAGAAGAGTAGGGAGAGTGAGAGAGTTGCCCAAGCAACAACTATTGACTATAGCAATGGAGATCCTTTTGGTCACTATGATAAGTTGGAAACTTCTTCATTTCTTAGCTCTGAATGCGAGTTCATGGCGTCTCCTCGAAATTCAATGTCGTCGTCGTCTTCTTCTTCTTCATCGCCATCATCTTTGCTTGAGTCGTTAACCGTACGAAATGTGGGGAGGGTGTCATTTGGAAGGCCTCCGTGTTGCAGTGCTTGGCAAATTAATCGAATTCTAACTTGTTACCATTGCTAG

Coding sequence (CDS)

ATGGATGGAAAATTTCATTGGGATATGAAGAACAAAGTCATATCAAGAACCTCTTCAGTTGGTTATTCTTCTCGCAGTATTTACTATTGTGGAACAGTTGAAGGAGTTCCTTTCAAATGGGAAACACAACCAGGAACTCCCAAAGATCCACCCCCTCAGGAGTTGCTTCCACCTCTCAGCCCTCCGCCGGCAGTTCTCAGCCTCGGGTTACCGAAACCGTGCATCGAACAACCGAAAATCCGACCTCGACCCCGGATGAGGCTTAGGTTTTGGAGGAGAAGCAAGAAGAGTAGGGAGAGTGAGAGAGTTGCCCAAGCAACAACTATTGACTATAGCAATGGAGATCCTTTTGGTCACTATGATAAGTTGGAAACTTCTTCATTTCTTAGCTCTGAATGCGAGTTCATGGCGTCTCCTCGAAATTCAATGTCGTCGTCGTCTTCTTCTTCTTCATCGCCATCATCTTTGCTTGAGTCGTTAACCGTACGAAATGTGGGGAGGGTGTCATTTGGAAGGCCTCCGTGTTGCAGTGCTTGGCAAATTAATCGAATTCTAACTTGTTACCATTGCTAG

Protein sequence

MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLSPPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHYDKLETSSFLSSECEFMASPRNSMSSSSSSSSSPSSLLESLTVRNVGRVSFGRPPCCSAWQINRILTCYHC

Homology

[Close]

BLAST of Lcy08g012830 vs. ExPASy TrEMBL
Match: A0A6J1K9Q8 (uncharacterized protein LOC111492375 OS=Cucurbita maxima OX=3661 GN=LOC111492375 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.9e-72
Identity = 149/192 (77.60%), Postives = 164/192 (85.42%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MDG FHWDMK+KVI+RTSS+G SSRS YYCG  EGVPFKWETQPGTPKDPPPQ+LLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAVLSLGLP PCIE+PK RPRP M+LRFWRR KKSR+  R AQATTIDYSNG      
Sbjct: 61  PPPAVLSLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDDGRAAQATTIDYSNG------ 120

Query: 121 DKLETSSFLSSECEFMASPRNSM--SSSSSSSSSPSSLLESLTVRNVGRVSFGRPPCC-S 180
            KLET SFLSS+CEFMASPR+SM  SSSSSSSSSPSSL+ESLTVR++GRVS GRP  C +
Sbjct: 121 -KLETFSFLSSDCEFMASPRDSMSSSSSSSSSSSPSSLIESLTVRHMGRVSLGRPSSCGT 180

Query: 181 AWQINRILTCYH 190
           A +I+RIL CYH
Sbjct: 181 AGKIHRILACYH 185

[Close]

BLAST of Lcy08g012830 vs. ExPASy TrEMBL
Match: A0A6J1ENL5 (uncharacterized protein LOC111436141 OS=Cucurbita moschata OX=3662 GN=LOC111436141 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.5e-72
Identity = 148/190 (77.89%), Postives = 162/190 (85.26%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MDG FHWDMK+KVI+RTSS+G SSRS YYCG  EGVPFKWETQPGTPKDPPPQ+LLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAV+SLGLP PCIE+PK RPRP M+L FWRR KKSR+  R AQATTIDYSN       
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPTMKLWFWRRVKKSRDGGRAAQATTIDYSN------- 120

Query: 121 DKLETSSFLSSECEFMASPRNSMSSSSSSSSSPSSLLESLTVRNVGRVSFGRPPCCS-AW 180
           DKLET SFLSS+CEFMASPR+SM SSSSSSSSPSSL+ESLTVRN+GRVS GRP  CS A 
Sbjct: 121 DKLETFSFLSSDCEFMASPRDSM-SSSSSSSSPSSLIESLTVRNMGRVSLGRPSSCSTAG 180

Query: 181 QINRILTCYH 190
           +I+RIL CYH
Sbjct: 181 KIHRILACYH 182

[Close]

BLAST of Lcy08g012830 vs. ExPASy TrEMBL
Match: A0A6J1DGF8 (uncharacterized protein LOC111020830 OS=Momordica charantia OX=3673 GN=LOC111020830 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 6.8e-70
Identity = 147/192 (76.56%), Postives = 157/192 (81.77%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MDGKFHWD K+KVISRTSSVG SSRSIYYCGT EGVPFKWETQPGTPKDPPPQE+LPPLS
Sbjct: 1   MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAVLSLGLPKPCIE+P  RPR RM LRFWR+S+K RE             NGD FGH 
Sbjct: 61  PPPAVLSLGLPKPCIERPNPRPRLRMSLRFWRKSEKKRE-------------NGDGFGHP 120

Query: 121 DKLETSSFLSSECEFMASPRNSMS--SSSSSSSSPSSLLESLTVRNVGRVSFGRPPCCSA 180
           DKLETSSF+SS+ EFMASPR+S+S  SSSSSSS PSSLLESL VRN+GRVSFGRP     
Sbjct: 121 DKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSLPSSLLESLNVRNMGRVSFGRP----- 174

Query: 181 WQINRILTCYHC 191
           WQINR L CYHC
Sbjct: 181 WQINRFLACYHC 174

[Close]

BLAST of Lcy08g012830 vs. ExPASy TrEMBL
Match: A0A6J1FCU1 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111444457 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.8e-65
Identity = 141/189 (74.60%), Postives = 153/189 (80.95%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MD  FHWD+KNKVISRTSS+G SSRSIYYCGT EGVPFKWETQPGTPKDPPPQ++LPPL+
Sbjct: 1   MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLT 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAVLSLGLPKPCIEQPK RPRP +RLRFWRRSKK+   +R A+A TIDYSN D FG+ 
Sbjct: 61  PPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRRSKKN--GKRDARARTIDYSNEDRFGNP 120

Query: 121 DKLETSSFLSSECEFMASPRNSMSSSS----SSSSSPSSLLESLTVRNVGRVSFGRPPCC 180
           DKLET SFLSS+CEFM S RNSM SS     SSSSSPSS  ESLTVR        R   C
Sbjct: 121 DKLETFSFLSSDCEFMTSSRNSMLSSPSLSLSSSSSPSSFFESLTVR--------RRLSC 179

Query: 181 SAWQINRIL 186
           +AWQINRIL
Sbjct: 181 NAWQINRIL 179

[Close]

BLAST of Lcy08g012830 vs. ExPASy TrEMBL
Match: A0A5D3BQA0 (Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00410 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 5.7e-61
Identity = 139/197 (70.56%), Postives = 157/197 (79.70%), Query Frame = 0


Query: 1   MDGK-FHWDMKNKVISRTSSVGYSSRSIYYCGTV-EGVPFKWETQPGTPKDPPPQELLPP 60
           M+G+ FHWDMKNKVISRTSS+G SS SIYY GT  +GVPFKWETQPGTPKDPPPQ+LLPP
Sbjct: 1   MEGQLFHWDMKNKVISRTSSIGCSSHSIYYSGTANQGVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGLPKP-CIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPF 120
           LSPPPAVLSLG+PKP CI+QPK R  PRMRLRFW++  KSR+  R AQ T ID+ N    
Sbjct: 61  LSPPPAVLSLGVPKPACIDQPKSRSLPRMRLRFWKKIMKSRDGGRAAQTTPIDHYN---- 120

Query: 121 GHYDKLETSSFLSSECEFMA--SPRNSMSSS--SSSSSSPSSLLESLTVRNVGRVSFGRP 180
              DKLET SFLSS+CEFMA  SPR+SMSSS  SSSSSSPSS ++SL V N  +VSFGRP
Sbjct: 121 ---DKLETFSFLSSDCEFMASPSPRDSMSSSSTSSSSSSPSSFIDSLNVGNTQKVSFGRP 180

Query: 181 PCC-SAWQINRILTCYH 190
               +AWQINR+L CYH
Sbjct: 181 SSWNNAWQINRMLVCYH 190

[Close]

BLAST of Lcy08g012830 vs. NCBI nr
Match: XP_022997465.1 (uncharacterized protein LOC111492375 [Cucurbita maxima])

HSP 1 Score: 282.0 bits (720), Expect = 3.9e-72
Identity = 149/192 (77.60%), Postives = 164/192 (85.42%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MDG FHWDMK+KVI+RTSS+G SSRS YYCG  EGVPFKWETQPGTPKDPPPQ+LLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAVLSLGLP PCIE+PK RPRP M+LRFWRR KKSR+  R AQATTIDYSNG      
Sbjct: 61  PPPAVLSLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDDGRAAQATTIDYSNG------ 120

Query: 121 DKLETSSFLSSECEFMASPRNSM--SSSSSSSSSPSSLLESLTVRNVGRVSFGRPPCC-S 180
            KLET SFLSS+CEFMASPR+SM  SSSSSSSSSPSSL+ESLTVR++GRVS GRP  C +
Sbjct: 121 -KLETFSFLSSDCEFMASPRDSMSSSSSSSSSSSPSSLIESLTVRHMGRVSLGRPSSCGT 180

Query: 181 AWQINRILTCYH 190
           A +I+RIL CYH
Sbjct: 181 AGKIHRILACYH 185

[Close]

BLAST of Lcy08g012830 vs. NCBI nr
Match: KAG7029810.1 (hypothetical protein SDJN02_08153, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280.8 bits (717), Expect = 8.8e-72
Identity = 150/192 (78.12%), Postives = 164/192 (85.42%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MDG FHWDMK+KVI+RTSS+G SSRS YYCG  EGVPFKWETQPGTPKDPPPQ+LLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPR--MRLRFWRRSKKSRESERVAQATTIDYSNGDPFG 120
           PPPAV+SLGLP PCIE+PK RPRPR  M+LRFWRR KKSR+  R AQATTIDYSN     
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPRPTMKLRFWRRVKKSRDGGRAAQATTIDYSN----- 120

Query: 121 HYDKLETSSFLSSECEFMASPRNSMSSSSSSSSSPSSLLESLTVRNVGRVSFGRPPCCS- 180
             DKLET SFLSS+CEFMASPR+SM SSSSSSSSPSSL+ESLTVRN+GRVS GRP  CS 
Sbjct: 121 --DKLETFSFLSSDCEFMASPRDSM-SSSSSSSSPSSLIESLTVRNMGRVSLGRPSSCST 180

Query: 181 AWQINRILTCYH 190
           A +I+RIL CYH
Sbjct: 181 AGKIHRILACYH 184

[Close]

BLAST of Lcy08g012830 vs. NCBI nr
Match: XP_022929606.1 (uncharacterized protein LOC111436141 [Cucurbita moschata])

HSP 1 Score: 280.4 bits (716), Expect = 1.1e-71
Identity = 148/190 (77.89%), Postives = 162/190 (85.26%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MDG FHWDMK+KVI+RTSS+G SSRS YYCG  EGVPFKWETQPGTPKDPPPQ+LLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAV+SLGLP PCIE+PK RPRP M+L FWRR KKSR+  R AQATTIDYSN       
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPTMKLWFWRRVKKSRDGGRAAQATTIDYSN------- 120

Query: 121 DKLETSSFLSSECEFMASPRNSMSSSSSSSSSPSSLLESLTVRNVGRVSFGRPPCCS-AW 180
           DKLET SFLSS+CEFMASPR+SM SSSSSSSSPSSL+ESLTVRN+GRVS GRP  CS A 
Sbjct: 121 DKLETFSFLSSDCEFMASPRDSM-SSSSSSSSPSSLIESLTVRNMGRVSLGRPSSCSTAG 180

Query: 181 QINRILTCYH 190
           +I+RIL CYH
Sbjct: 181 KIHRILACYH 182

[Close]

BLAST of Lcy08g012830 vs. NCBI nr
Match: XP_023546389.1 (uncharacterized protein LOC111805512 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.7 bits (709), Expect = 7.4e-71
Identity = 146/190 (76.84%), Postives = 161/190 (84.74%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MDG FHWDMK+KVI+RTSS+G SSRS YYCG  EGVPF WETQPGTPKDPPPQ+LLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFVWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAV+SLGLP PCIE+PK RPRP M+LRFWRR KKSR+  R AQATTIDYSN       
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDGGRAAQATTIDYSN------- 120

Query: 121 DKLETSSFLSSECEFMASPRNSMSSSSSSSSSPSSLLESLTVRNVGRVSFGRPPCCS-AW 180
           DKLET SFLSS+CEFMASPR+SM SSSSSSSSPSSL+ESLTV+N+GR S GRP  CS A 
Sbjct: 121 DKLETFSFLSSDCEFMASPRDSM-SSSSSSSSPSSLIESLTVQNMGRASLGRPSSCSTAG 180

Query: 181 QINRILTCYH 190
           +I+RIL CYH
Sbjct: 181 KIHRILACYH 182

[Close]

BLAST of Lcy08g012830 vs. NCBI nr
Match: KAG7020905.1 (hypothetical protein SDJN02_17593, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-69
Identity = 147/194 (75.77%), Postives = 158/194 (81.44%), Query Frame = 0


Query: 1   MDGKFHWDMKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLS 60
           MD  FHWD+KNKVISRTSS+G SSRSIYYCGT EGVPFKWETQPGTPKDPPPQ++LPPL+
Sbjct: 1   MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLT 60

Query: 61  PPPAVLSLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHY 120
           PPPAVLSLGLPKPCIEQPK RPRP +RLRFWRRSKK+   +R A+A TIDYSN D FGH 
Sbjct: 61  PPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRRSKKN--GKRDARARTIDYSNEDRFGHP 120

Query: 121 DKLETSSFLSSECEFMASPRNSMSSSS----SSSSSPSSLLESLTVRNVGRVSFGRPPCC 180
           DKLET SFLSS+CEFM S RNSMSSS     SSSSSPSS  ESLTVR        R   C
Sbjct: 121 DKLETFSFLSSDCEFMTSSRNSMSSSPSLSLSSSSSPSSFFESLTVR--------RRLNC 180

Query: 181 SAWQINRILTCYHC 191
           +AWQINRIL CYHC
Sbjct: 181 NAWQINRILACYHC 184

[Close]

BLAST of Lcy08g012830 vs. TAIR 10
Match: AT4G25845.1 (BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 3.1e-14
Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 14  ISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLSPPPAVLSLGLPKP 73
           ISR SSVGY    +      EGVPF+WE QPGTP +  P+E++PPLSPPPA+LSLGLPKP
Sbjct: 12  ISRNSSVGYYDERM-----PEGVPFEWEMQPGTPINTQPREVVPPLSPPPAMLSLGLPKP 71

Query: 74  --CIEQPKIRPRP-RMRLRFWRRSKKSRESERV 104
              IE+PK    P +++LR W+     R   R+
Sbjct: 72  SISIEEPKNFVFPTKLKLRNWKHLHCKRYFSRL 99

[Close]

BLAST of Lcy08g012830 vs. TAIR 10
Match: AT4G25850.2 (OSBP(oxysterol binding protein)-related protein 4B )

HSP 1 Score: 76.3 bits (186), Expect = 3.1e-14
Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 14  ISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQELLPPLSPPPAVLSLGLPKP 73
           ISR SSVGY    +      EGVPF+WE QPGTP +  P+E++PPLSPPPA+LSLGLPKP
Sbjct: 12  ISRNSSVGYYDERM-----PEGVPFEWEMQPGTPINTQPREVVPPLSPPPAMLSLGLPKP 71

Query: 74  --CIEQPKIRPRP-RMRLRFWRRSKKSRESERV 104
              IE+PK    P +++LR W+     R   R+
Sbjct: 72  SISIEEPKNFVFPTKLKLRNWKHLHCKRYFSRL 99

[Close]

BLAST of Lcy08g012830 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.7e-04
Identity = 52/150 (34.67%), Postives = 65/150 (43.33%), Query Frame = 0


Query: 15  SRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQ-ELLPPLSPPPAVLSLGLPKP 74
           S  S+   S R  YY G    VPF+WE+ PGTPK P  +   LPPL+PPP+  S      
Sbjct: 54  SSVSAACPSFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFS------ 113

Query: 75  CIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHYDKLETSS------ 134
                +IR          RRSKKS +       T + + +GD  G   KL  SS      
Sbjct: 114 -FSGDQIR----------RRSKKSTKKILALIPTRLFWLSGDHNGKAKKLSASSPPSLSE 173

Query: 135 -FLSSECEF----MASPRNSMSSSSSSSSS 153
             L  E E+      + RN M   SS  SS
Sbjct: 174 RVLIDENEYDLFKFQTERNVMRRFSSFDSS 186

[Close]

BLAST of Lcy08g012830 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 8.3e-04
Identity = 51/152 (33.55%), Postives = 67/152 (44.08%), Query Frame = 0


Query: 9   MKNKVISRTSSVGYSSRSIYYCGTVEGVPFKWETQPGTPKDPPPQE--LLPPLSPPPAVL 68
           + +K+I + SS   SS  IYY G    VPF WET+PGTPK     E   LPPL+PPP+  
Sbjct: 13  ISSKIIVKESSQVNSSSRIYYYGGA-SVPFLWETRPGTPKHALFSESLRLPPLTPPPSYY 72

Query: 69  SLGLPKPCIEQPKIRPRPRMRLRFWRRSKKSRESERVAQATTIDYSNGDPFGHYDKLETS 128
                                      S  S    ++++A TI  +       + K   S
Sbjct: 73  ---------------------------SSSSSSGNKLSKARTIKQT------RFVKTLLS 129

Query: 129 SFLSSECEFMASPRNSMSSSSSSSSSPSSLLE 159
             +S    F  S  +S SSSS SSSSP S +E
Sbjct: 133 RHVSRP-SFSWSSASSSSSSSYSSSSPPSKVE 129

The following BLAST results are available for this feature:

BLAST of Lcy08g012830 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy08g012830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K9Q8	1.9e-72	77.60	uncharacterized protein LOC111492375 OS=Cucurbita maxima OX=3661 GN=LOC111492375...	[more]
A0A6J1ENL5	5.5e-72	77.89	uncharacterized protein LOC111436141 OS=Cucurbita moschata OX=3662 GN=LOC1114361...	[more]
A0A6J1DGF8	6.8e-70	76.56	uncharacterized protein LOC111020830 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1FCU1	3.8e-65	74.60	Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111444457 PE=4 SV=1	[more]
A0A5D3BQA0	5.7e-61	70.56	Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var....	[more]

BLAST of Lcy08g012830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997465.1	3.9e-72	77.60	uncharacterized protein LOC111492375 [Cucurbita maxima]	[more]
KAG7029810.1	8.8e-72	78.13	hypothetical protein SDJN02_08153, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022929606.1	1.1e-71	77.89	uncharacterized protein LOC111436141 [Cucurbita moschata]	[more]
XP_023546389.1	7.4e-71	76.84	uncharacterized protein LOC111805512 [Cucurbita pepo subsp. pepo]	[more]
KAG7020905.1	1.1e-69	75.77	hypothetical protein SDJN02_17593, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lcy08g012830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25845.1	3.1e-14	51.61	BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-rela...	[more]
AT4G25850.2	3.1e-14	51.61	OSBP(oxysterol binding protein)-related protein 4B	[more]
AT5G01790.1	1.7e-04	34.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G40475.1	8.3e-04	33.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..61
None	No IPR available	PANTHER	PTHR33257	OS05G0165500 PROTEIN	coord: 9..164
None	No IPR available	PANTHER	PTHR33257:SF6	OXYSTEROL-BINDING 4B-LIKE PROTEIN-RELATED	coord: 9..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g012830.1	Lcy08g012830.1	mRNA