Lcy08g012150 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g012150
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	L10-interacting MYB domain-containing protein-like
Location	Chr08: 40520564 .. 40521472 (+)
RNA-Seq Expression	Lcy08g012150
Synteny	Lcy08g012150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATTCTGTTATTCCCTTGAGTGGTATATTTTTTTACTTAAATAGAAAGTTGAATCATATTTAGTTCAATTCTTTATTTATTGAGAACTTGTGAAATTGTTTAGTCTTTGTTTCTTATGTAAACTTTATTTTGTATTATAGAGTTCCTAATATTGAAAAATAAATGGAGCGCATTAAAGAAGGACTGGCAGATATGGACAGATTTGGTTGGAAATAAAACAGGCTTAGGATGGGATCCATTGAGACAAACTATCGATGCAACGAGTGAGTGGTGGGAAGATAAATTAAAGGTACATCATTTATCTATATATTTATTTATTAGGAAAAAAAACATAATTTAATATTGCATTAATTAATCTTTGTAGGTTAAGCCTGAGGCAGCAAAATTTCGTGCCAAGGGGTTACAAAATGCAGATCAATTAGACATTCTTTTTAAAGATATTGCAGTTACAGGAGATGGAGCATGGGCACCCTCTCAAGGATTTGTACCTGGAAGTATTGAGGGTGACCCATCTAGAATAGGTGATAATGATGATACAATAGAGGAGACAGAGCATAATGATACGAATGACGATACTGAATATTCAGTACATACTACTGGAGATCATACTCAAGAGAAGGGGAAAAAAAGAAAAAGGATAGGATCAAAGGGTAGTGTTGCACACAAACTTTGTAATCAATTGGAACGTGTGTGTGAATCAATAGATGCTAGGAGAAGAGATGTACCAGGTTGTAGCATTCTTGAAGTGATGAATGCCTTACGAGGCATACCTGAAATTGTGGAAGGCGGTGAGCTCTTCATGAAAGCTGTAGATATCTTTACAAAGAGAGAAAATAGAGAAATGTTTGTAGCATTGGAAAAGCCTGAGATTCAAGTTGCGTGGCTCAAGCAGAAGAGAGTTTAA

mRNA sequence

ATGGAGTTCCTAATATTGAAAAATAAATGGAGCGCATTAAAGAAGGACTGGCAGATATGGACAGATTTGGTTGGAAATAAAACAGGCTTAGGATGGGATCCATTGAGACAAACTATCGATGCAACGAGTGAGTGGTGGGAAGATAAATTAAAGGTTAAGCCTGAGGCAGCAAAATTTCGTGCCAAGGGGTTACAAAATGCAGATCAATTAGACATTCTTTTTAAAGATATTGCAGTTACAGGAGATGGAGCATGGGCACCCTCTCAAGGATTTGTACCTGGAAGTATTGAGGGTGACCCATCTAGAATAGGTGATAATGATGATACAATAGAGGAGACAGAGCATAATGATACGAATGACGATACTGAATATTCAGTACATACTACTGGAGATCATACTCAAGAGAAGGGGAAAAAAAGAAAAAGGATAGGATCAAAGGGTAGTGTTGCACACAAACTTTGTAATCAATTGGAACGTGTGTGTGAATCAATAGATGCTAGGAGAAGAGATGTACCAGGTTGTAGCATTCTTGAAGTGATGAATGCCTTACGAGGCATACCTGAAATTGTGGAAGGCGGTGAGCTCTTCATGAAAGCTGTAGATATCTTTACAAAGAGAGAAAATAGAGAAATGTTTGTAGCATTGGAAAAGCCTGAGATTCAAGTTGCGTGGCTCAAGCAGAAGAGAGTTTAA

Coding sequence (CDS)

ATGGAGTTCCTAATATTGAAAAATAAATGGAGCGCATTAAAGAAGGACTGGCAGATATGGACAGATTTGGTTGGAAATAAAACAGGCTTAGGATGGGATCCATTGAGACAAACTATCGATGCAACGAGTGAGTGGTGGGAAGATAAATTAAAGGTTAAGCCTGAGGCAGCAAAATTTCGTGCCAAGGGGTTACAAAATGCAGATCAATTAGACATTCTTTTTAAAGATATTGCAGTTACAGGAGATGGAGCATGGGCACCCTCTCAAGGATTTGTACCTGGAAGTATTGAGGGTGACCCATCTAGAATAGGTGATAATGATGATACAATAGAGGAGACAGAGCATAATGATACGAATGACGATACTGAATATTCAGTACATACTACTGGAGATCATACTCAAGAGAAGGGGAAAAAAAGAAAAAGGATAGGATCAAAGGGTAGTGTTGCACACAAACTTTGTAATCAATTGGAACGTGTGTGTGAATCAATAGATGCTAGGAGAAGAGATGTACCAGGTTGTAGCATTCTTGAAGTGATGAATGCCTTACGAGGCATACCTGAAATTGTGGAAGGCGGTGAGCTCTTCATGAAAGCTGTAGATATCTTTACAAAGAGAGAAAATAGAGAAATGTTTGTAGCATTGGAAAAGCCTGAGATTCAAGTTGCGTGGCTCAAGCAGAAGAGAGTTTAA

Protein sequence

MEFLILKNKWSALKKDWQIWTDLVGNKTGLGWDPLRQTIDATSEWWEDKLKVKPEAAKFRAKGLQNADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSRIGDNDDTIEETEHNDTNDDTEYSVHTTGDHTQEKGKKRKRIGSKGSVAHKLCNQLERVCESIDARRRDVPGCSILEVMNALRGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWLKQKRV

Homology

[Close]

BLAST of Lcy08g012150 vs. ExPASy Swiss-Prot
Match: Q9FFJ8 (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.9e-19
Identity = 74/232 (31.90%), Postives = 116/232 (50.00%), Query Frame = 0


Query: 6   LKNKWSALKKDWQIWTDLVGNKTGLGWDPLRQTIDATSEWWEDKLKVKPEAAKFRAKGLQ 65
           LKN W   +K W+IW  LVG  + + WDP  ++  AT E W   ++  P A +FR K + 
Sbjct: 221 LKNHWDCTRKAWKIWCQLVG-ASSMKWDPESRSFGATEEEWRIYIRENPRAGQFRHKEVP 280

Query: 66  NADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSRIGDNDDTIEETEHNDTNDDTEYS 125
           +ADQL I+F  +   G+    PS+           SR     +  E  +  DT   ++  
Sbjct: 281 HADQLAIIFNGVIEPGETYTPPSR-----------SRKKLLHNRSESPQWRDTTPLSKMH 340

Query: 126 V---HTTGDHTQEKGKKRKRIGSKGSVA---HKLCN----QLERVCESIDARRRDVPGCS 185
           V    T+  +      +  RI S+ +      KL N    Q   V   I++ +   P  S
Sbjct: 341 VDEAETSRQNGCYAESQEDRIDSENAQPLDDMKLMNDVMLQESPVFVEIESAK---PMYS 400

Query: 186 ILEVMNALRGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWLKQ 228
           I E + +L  I E+ +G EL+M A+D+F KRE RE+F+ L+KP +++AWL++
Sbjct: 401 IGECIKSLNAIEEVEQGSELYMFALDLFLKREYREIFLELKKPSLRIAWLQR 437

[Close]

BLAST of Lcy08g012150 vs. ExPASy Swiss-Prot
Match: Q5Z5Q3 (Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0520600 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.8e-04
Identity = 47/173 (27.17%), Postives = 80/173 (46.24%), Query Frame = 0


Query: 55  EAAKFRAKGLQNADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSRIGDNDDTIEETE 114
           +  KFR + L   D L+I+F+ + +  D A   S   V   I G+ S I  ND  +E T 
Sbjct: 539 DCCKFRFEPLGKVDLLNIIFEGM-LDSDSAGDESNICVNAMIGGNKSSIASND--VEMTR 598

Query: 115 HNDTNDDTEYSVHTTGDHTQEKGKKRKRIGSKGSVAHKLCNQLERVCESIDARRRDVPGC 174
            N    + E  +  + D         ++  + G++++ +  + E+      + R    GC
Sbjct: 599 KNVNRQNEEAILQKSYDEVPNNKMDPQKNYADGAISYLI--EKEKPTNLESSVRICRGGC 658

Query: 175 SILEVMNALRGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWLKQ 228
           SI E+M  +      VEG +    A  +F K E RE+F+ L+  E ++ WLK+
Sbjct: 659 SISEIMELVVD-AGAVEGSDEHFMATLLFIKPEYREIFLTLDTREGRLGWLKR 705

[Close]

BLAST of Lcy08g012150 vs. ExPASy TrEMBL
Match: A0A1S3B4J4 (LOW QUALITY PROTEIN: L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103485728 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.1e-85
Identity = 165/227 (72.69%), Postives = 192/227 (84.58%), Query Frame = 0


Query: 6   LKNKWSALKKDWQIWTDLVGNKTGLGWDPLRQTIDATSEWWEDKLKVKPEAAKFRAKGLQ 65
           +KNKW  LKKDWQI TDLVGN TGL WD LRQTID+ + WWE+ LKVK E AKFRAKGLQ
Sbjct: 20  MKNKWDVLKKDWQILTDLVGNNTGLSWDSLRQTIDSPTRWWEENLKVKLEEAKFRAKGLQ 79

Query: 66  NADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSR-IGDNDDTIEETEHNDTNDDTEY 125
           NADQLDILFK+IAVTGDGAWAPSQGF P S EG+ SR +G+NDDT E+ ++NDTN DTEY
Sbjct: 80  NADQLDILFKNIAVTGDGAWAPSQGFAPPSTEGNSSRHVGENDDTFEDMKYNDTN-DTEY 139

Query: 126 SVHTTGDHTQEKGKKR-KRIGSKGSVAHKLCNQLERVCESIDARRRDVPGCSILEVMNAL 185
           S+H   D+TQ KGKK+ ++  SKG+VA+KLC+QLERVC SID RRRD+PGCSI EV+N L
Sbjct: 140 SIHNAEDYTQGKGKKKEEKEESKGNVANKLCDQLERVCGSIDNRRRDLPGCSIFEVINVL 199

Query: 186 RGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWLKQKRV 231
             I  I++G ELFMKAVDIFTKR+NREMFVAL++PEIQVAWLKQK+V
Sbjct: 200 LDILGIIKGNELFMKAVDIFTKRKNREMFVALQEPEIQVAWLKQKKV 245

[Close]

BLAST of Lcy08g012150 vs. ExPASy TrEMBL
Match: A0A1S3CRV5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103504039 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.2e-65
Identity = 134/185 (72.43%), Postives = 155/185 (83.78%), Query Frame = 0


Query: 47  EDKLKVKPEAAKFRAKGLQNADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSR-IGD 106
           + ++ V PE AKFRAKGLQNADQLDILFKDI VT DGAWAPSQGFVP S EG+ SR +G+
Sbjct: 54  DGEIGVMPETAKFRAKGLQNADQLDILFKDIEVTEDGAWAPSQGFVPQSTEGNSSRYVGE 113

Query: 107 NDDTIEETEHNDTNDDTEYSVHTTGDHTQEKGKKRKRIGSKGSVAHKLCNQLERVCESID 166
           NDDT ++ EHN    +TEYS+H   D+TQ KGKKRKRIGSKG+VA+KLCNQLERVC SID
Sbjct: 114 NDDTYKDMEHN----NTEYSIHNVEDYTQGKGKKRKRIGSKGNVANKLCNQLERVCGSID 173

Query: 167 ARRRDVPGCSILEVMNALRGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWL 226
            RRRD+PGCSI EVMN L  I E+++G ELFMKA DIFTK ENRE+FVAL++PEIQVAWL
Sbjct: 174 NRRRDLPGCSIFEVMNVLWDIHELIKGDELFMKAADIFTKMENREIFVALQEPEIQVAWL 233

Query: 227 KQKRV 231
           KQK+V
Sbjct: 234 KQKKV 234

[Close]

BLAST of Lcy08g012150 vs. ExPASy TrEMBL
Match: A0A5D3BFL5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00050 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.6e-65
Identity = 133/178 (74.72%), Postives = 151/178 (84.83%), Query Frame = 0


Query: 54  PEAAKFRAKGLQNADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSR-IGDNDDTIEE 113
           PE AKFRAKGLQNADQLDILFKDI VT DGAWAPSQGFVP S EG+ SR +G+NDDT ++
Sbjct: 2   PETAKFRAKGLQNADQLDILFKDIEVTEDGAWAPSQGFVPQSTEGNSSRYVGENDDTYKD 61

Query: 114 TEHNDTNDDTEYSVHTTGDHTQEKGKKRKRIGSKGSVAHKLCNQLERVCESIDARRRDVP 173
            EHN    +TEYS+H   D+TQ KGKKRKRIGSKG+VA+KLCNQLERVC SID RRRD+P
Sbjct: 62  MEHN----NTEYSIHNVEDYTQGKGKKRKRIGSKGNVANKLCNQLERVCGSIDNRRRDLP 121

Query: 174 GCSILEVMNALRGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWLKQKRV 231
           GCSI EVMN L  I E+++G ELFMKA DIFTK ENRE+FVAL++PEIQVAWLKQK+V
Sbjct: 122 GCSIFEVMNVLWDIHELIKGDELFMKAADIFTKMENREIFVALQEPEIQVAWLKQKKV 175

[Close]

BLAST of Lcy08g012150 vs. ExPASy TrEMBL
Match: A0A0A0KKV6 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G167170 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 2.3e-64
Identity = 129/229 (56.33%), Postives = 165/229 (72.05%), Query Frame = 0


Query: 6   LKNKWSALKKDWQIWTDLVGNKTGLGWDPLRQTIDATSEWWEDKLKVKPEAAKFRAKGLQ 65
           LKNKW+ LK+DWQ+W DL+GN+  +GWDPLRQTIDATS+WW+ KLKV PEAAKFRAKGLQ
Sbjct: 68  LKNKWTTLKRDWQVWNDLIGNEKEIGWDPLRQTIDATSQWWDHKLKVLPEAAKFRAKGLQ 127

Query: 66  NADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSRIGDNDDTIEETEHNDTN----DD 125
           + + L+ILFK +A+ G GAWAP+   V    E D      N+DTI +T+ N+      + 
Sbjct: 128 SLELLNILFKGVAING-GAWAPNPSQVVLRKESDEVEEDYNEDTIGDTKFNENEFNNVES 187

Query: 126 TEYSVHTTGDHTQEKGKKRKRIGSKGSVAHKLCNQLERVCESIDARRRDVPGCSILEVMN 185
               V+T+  HTQE  K+RKR+ SK     +L + L+R+ + I+ R+RD+PGCS LEVM 
Sbjct: 188 NTNEVNTSATHTQESEKRRKRVDSKVGSPSRLFDALDRLSDVIEYRKRDLPGCSTLEVME 247

Query: 186 ALRGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWLKQKRV 231
            LR +P I+EG EL+MKA DI  KRENREMFVAL+KP IQ+ WLKQKRV
Sbjct: 248 TLRSLPGIIEGDELYMKAADILIKRENREMFVALQKPAIQITWLKQKRV 295

[Close]

BLAST of Lcy08g012150 vs. ExPASy TrEMBL
Match: A0A5A7UN70 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00110 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 5.1e-64
Identity = 129/229 (56.33%), Postives = 165/229 (72.05%), Query Frame = 0


Query: 6   LKNKWSALKKDWQIWTDLVGNKTGLGWDPLRQTIDATSEWWEDKLKVKPEAAKFRAKGLQ 65
           LKNKW+ LK+DWQ+W DL+ N+  +GWDPLRQTIDATS+WW+ KLKV PEAAKFRAKGLQ
Sbjct: 70  LKNKWTTLKRDWQVWNDLIRNEKEIGWDPLRQTIDATSQWWDHKLKVLPEAAKFRAKGLQ 129

Query: 66  NADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSRIGDNDDTIEETEHNDTN----DD 125
           N + L+ILFK +A+ G GAWAP+   V    E D      NDDTI +T+ N+      + 
Sbjct: 130 NVELLNILFKGVAING-GAWAPTPSQVVLRKESDEVEKDYNDDTIGDTKFNENEFNNVES 189

Query: 126 TEYSVHTTGDHTQEKGKKRKRIGSKGSVAHKLCNQLERVCESIDARRRDVPGCSILEVMN 185
               V+T+  +TQE  K+RKR+ SK     +L + L+R+ ++I+ R+RD+PGCS LEVM 
Sbjct: 190 NTNEVNTSATYTQESEKRRKRVDSKVGSPSRLFDALDRLSDAIEYRKRDLPGCSTLEVME 249

Query: 186 ALRGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWLKQKRV 231
            LR +P I+EG EL+MKA DI  KRENREMFVAL+KP IQ+ WLKQKRV
Sbjct: 250 TLRSLPGIIEGDELYMKAADILIKRENREMFVALQKPLIQITWLKQKRV 297

[Close]

BLAST of Lcy08g012150 vs. NCBI nr
Match: XP_008441646.2 (PREDICTED: LOW QUALITY PROTEIN: L10-interacting MYB domain-containing protein-like, partial [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 2.2e-85
Identity = 165/227 (72.69%), Postives = 192/227 (84.58%), Query Frame = 0


Query: 6   LKNKWSALKKDWQIWTDLVGNKTGLGWDPLRQTIDATSEWWEDKLKVKPEAAKFRAKGLQ 65
           +KNKW  LKKDWQI TDLVGN TGL WD LRQTID+ + WWE+ LKVK E AKFRAKGLQ
Sbjct: 20  MKNKWDVLKKDWQILTDLVGNNTGLSWDSLRQTIDSPTRWWEENLKVKLEEAKFRAKGLQ 79

Query: 66  NADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSR-IGDNDDTIEETEHNDTNDDTEY 125
           NADQLDILFK+IAVTGDGAWAPSQGF P S EG+ SR +G+NDDT E+ ++NDTN DTEY
Sbjct: 80  NADQLDILFKNIAVTGDGAWAPSQGFAPPSTEGNSSRHVGENDDTFEDMKYNDTN-DTEY 139

Query: 126 SVHTTGDHTQEKGKKR-KRIGSKGSVAHKLCNQLERVCESIDARRRDVPGCSILEVMNAL 185
           S+H   D+TQ KGKK+ ++  SKG+VA+KLC+QLERVC SID RRRD+PGCSI EV+N L
Sbjct: 140 SIHNAEDYTQGKGKKKEEKEESKGNVANKLCDQLERVCGSIDNRRRDLPGCSIFEVINVL 199

Query: 186 RGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWLKQKRV 231
             I  I++G ELFMKAVDIFTKR+NREMFVAL++PEIQVAWLKQK+V
Sbjct: 200 LDILGIIKGNELFMKAVDIFTKRKNREMFVALQEPEIQVAWLKQKKV 245

[Close]

BLAST of Lcy08g012150 vs. NCBI nr
Match: XP_008466688.2 (PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo])

HSP 1 Score: 259.6 bits (662), Expect = 2.5e-65
Identity = 134/185 (72.43%), Postives = 155/185 (83.78%), Query Frame = 0


Query: 47  EDKLKVKPEAAKFRAKGLQNADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSR-IGD 106
           + ++ V PE AKFRAKGLQNADQLDILFKDI VT DGAWAPSQGFVP S EG+ SR +G+
Sbjct: 54  DGEIGVMPETAKFRAKGLQNADQLDILFKDIEVTEDGAWAPSQGFVPQSTEGNSSRYVGE 113

Query: 107 NDDTIEETEHNDTNDDTEYSVHTTGDHTQEKGKKRKRIGSKGSVAHKLCNQLERVCESID 166
           NDDT ++ EHN    +TEYS+H   D+TQ KGKKRKRIGSKG+VA+KLCNQLERVC SID
Sbjct: 114 NDDTYKDMEHN----NTEYSIHNVEDYTQGKGKKRKRIGSKGNVANKLCNQLERVCGSID 173

Query: 167 ARRRDVPGCSILEVMNALRGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWL 226
            RRRD+PGCSI EVMN L  I E+++G ELFMKA DIFTK ENRE+FVAL++PEIQVAWL
Sbjct: 174 NRRRDLPGCSIFEVMNVLWDIHELIKGDELFMKAADIFTKMENREIFVALQEPEIQVAWL 233

Query: 227 KQKRV 231
           KQK+V
Sbjct: 234 KQKKV 234

[Close]

BLAST of Lcy08g012150 vs. NCBI nr
Match: TYJ97917.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 258.1 bits (658), Expect = 7.4e-65
Identity = 133/178 (74.72%), Postives = 151/178 (84.83%), Query Frame = 0


Query: 54  PEAAKFRAKGLQNADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSR-IGDNDDTIEE 113
           PE AKFRAKGLQNADQLDILFKDI VT DGAWAPSQGFVP S EG+ SR +G+NDDT ++
Sbjct: 2   PETAKFRAKGLQNADQLDILFKDIEVTEDGAWAPSQGFVPQSTEGNSSRYVGENDDTYKD 61

Query: 114 TEHNDTNDDTEYSVHTTGDHTQEKGKKRKRIGSKGSVAHKLCNQLERVCESIDARRRDVP 173
            EHN    +TEYS+H   D+TQ KGKKRKRIGSKG+VA+KLCNQLERVC SID RRRD+P
Sbjct: 62  MEHN----NTEYSIHNVEDYTQGKGKKRKRIGSKGNVANKLCNQLERVCGSIDNRRRDLP 121

Query: 174 GCSILEVMNALRGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWLKQKRV 231
           GCSI EVMN L  I E+++G ELFMKA DIFTK ENRE+FVAL++PEIQVAWLKQK+V
Sbjct: 122 GCSIFEVMNVLWDIHELIKGDELFMKAADIFTKMENREIFVALQEPEIQVAWLKQKKV 175

[Close]

BLAST of Lcy08g012150 vs. NCBI nr
Match: XP_038874429.1 (L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874430.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874431.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874432.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida])

HSP 1 Score: 255.8 bits (652), Expect = 3.7e-64
Identity = 131/225 (58.22%), Postives = 163/225 (72.44%), Query Frame = 0


Query: 6   LKNKWSALKKDWQIWTDLVGNKTGLGWDPLRQTIDATSEWWEDKLKVKPEAAKFRAKGLQ 65
           LKNKW+ LKKDWQ+W DL+GN+  +GWDPLRQTIDATS+WW+ KLK  PEAAKFRAKGLQ
Sbjct: 70  LKNKWTTLKKDWQVWNDLIGNEKEIGWDPLRQTIDATSQWWDHKLKDLPEAAKFRAKGLQ 129

Query: 66  NADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSRIGDNDDTIEETEHNDTNDDTEYS 125
           N + L+ILFKD+AV+G GAWAP+   V             NDDT  +T+ N+   +T   
Sbjct: 130 NVELLNILFKDVAVSG-GAWAPTPSQVVLRKATSDGIEDYNDDTTGDTKFNNVESNTN-E 189

Query: 126 VHTTGDHTQEKGKKRKRIGSKGSVAHKLCNQLERVCESIDARRRDVPGCSILEVMNALRG 185
           V+T+  +TQ   K+RK++ SK     +L   L+R+C+ I+ RRRD+PGCS LEVM  LRG
Sbjct: 190 VNTSATYTQGSEKRRKKVDSKVGSPCRLFGALDRLCDVIEYRRRDLPGCSTLEVMETLRG 249

Query: 186 IPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWLKQKRV 231
           +P I+EG EL+MKA DI  KRENREMFVAL KP IQ+ WLKQKRV
Sbjct: 250 LPGIIEGDELYMKAADILIKRENREMFVALRKPAIQITWLKQKRV 292

[Close]

BLAST of Lcy08g012150 vs. NCBI nr
Match: XP_004143736.1 (L10-interacting MYB domain-containing protein [Cucumis sativus] >XP_031740844.1 L10-interacting MYB domain-containing protein [Cucumis sativus] >XP_031740845.1 L10-interacting MYB domain-containing protein [Cucumis sativus] >KGN50325.1 hypothetical protein Csa_000493 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 4.8e-64
Identity = 129/229 (56.33%), Postives = 165/229 (72.05%), Query Frame = 0


Query: 6   LKNKWSALKKDWQIWTDLVGNKTGLGWDPLRQTIDATSEWWEDKLKVKPEAAKFRAKGLQ 65
           LKNKW+ LK+DWQ+W DL+GN+  +GWDPLRQTIDATS+WW+ KLKV PEAAKFRAKGLQ
Sbjct: 68  LKNKWTTLKRDWQVWNDLIGNEKEIGWDPLRQTIDATSQWWDHKLKVLPEAAKFRAKGLQ 127

Query: 66  NADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSRIGDNDDTIEETEHNDTN----DD 125
           + + L+ILFK +A+ G GAWAP+   V    E D      N+DTI +T+ N+      + 
Sbjct: 128 SLELLNILFKGVAING-GAWAPNPSQVVLRKESDEVEEDYNEDTIGDTKFNENEFNNVES 187

Query: 126 TEYSVHTTGDHTQEKGKKRKRIGSKGSVAHKLCNQLERVCESIDARRRDVPGCSILEVMN 185
               V+T+  HTQE  K+RKR+ SK     +L + L+R+ + I+ R+RD+PGCS LEVM 
Sbjct: 188 NTNEVNTSATHTQESEKRRKRVDSKVGSPSRLFDALDRLSDVIEYRKRDLPGCSTLEVME 247

Query: 186 ALRGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWLKQKRV 231
            LR +P I+EG EL+MKA DI  KRENREMFVAL+KP IQ+ WLKQKRV
Sbjct: 248 TLRSLPGIIEGDELYMKAADILIKRENREMFVALQKPAIQITWLKQKRV 295

[Close]

BLAST of Lcy08g012150 vs. TAIR 10
Match: AT5G05800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 3.4e-20
Identity = 74/232 (31.90%), Postives = 116/232 (50.00%), Query Frame = 0


Query: 6   LKNKWSALKKDWQIWTDLVGNKTGLGWDPLRQTIDATSEWWEDKLKVKPEAAKFRAKGLQ 65
           LKN W   +K W+IW  LVG  + + WDP  ++  AT E W   ++  P A +FR K + 
Sbjct: 221 LKNHWDCTRKAWKIWCQLVG-ASSMKWDPESRSFGATEEEWRIYIRENPRAGQFRHKEVP 280

Query: 66  NADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSRIGDNDDTIEETEHNDTNDDTEYS 125
           +ADQL I+F  +   G+    PS+           SR     +  E  +  DT   ++  
Sbjct: 281 HADQLAIIFNGVIEPGETYTPPSR-----------SRKKLLHNRSESPQWRDTTPLSKMH 340

Query: 126 V---HTTGDHTQEKGKKRKRIGSKGSVA---HKLCN----QLERVCESIDARRRDVPGCS 185
           V    T+  +      +  RI S+ +      KL N    Q   V   I++ +   P  S
Sbjct: 341 VDEAETSRQNGCYAESQEDRIDSENAQPLDDMKLMNDVMLQESPVFVEIESAK---PMYS 400

Query: 186 ILEVMNALRGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWLKQ 228
           I E + +L  I E+ +G EL+M A+D+F KRE RE+F+ L+KP +++AWL++
Sbjct: 401 IGECIKSLNAIEEVEQGSELYMFALDLFLKREYREIFLELKKPSLRIAWLQR 437

[Close]

BLAST of Lcy08g012150 vs. TAIR 10
Match: AT5G05800.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 3.4e-20
Identity = 74/232 (31.90%), Postives = 116/232 (50.00%), Query Frame = 0


Query: 6   LKNKWSALKKDWQIWTDLVGNKTGLGWDPLRQTIDATSEWWEDKLKVKPEAAKFRAKGLQ 65
           LKN W   +K W+IW  LVG  + + WDP  ++  AT E W   ++  P A +FR K + 
Sbjct: 221 LKNHWDCTRKAWKIWCQLVG-ASSMKWDPESRSFGATEEEWRIYIRENPRAGQFRHKEVP 280

Query: 66  NADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSRIGDNDDTIEETEHNDTNDDTEYS 125
           +ADQL I+F  +   G+    PS+           SR     +  E  +  DT   ++  
Sbjct: 281 HADQLAIIFNGVIEPGETYTPPSR-----------SRKKLLHNRSESPQWRDTTPLSKMH 340

Query: 126 V---HTTGDHTQEKGKKRKRIGSKGSVA---HKLCN----QLERVCESIDARRRDVPGCS 185
           V    T+  +      +  RI S+ +      KL N    Q   V   I++ +   P  S
Sbjct: 341 VDEAETSRQNGCYAESQEDRIDSENAQPLDDMKLMNDVMLQESPVFVEIESAK---PMYS 400

Query: 186 ILEVMNALRGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWLKQ 228
           I E + +L  I E+ +G EL+M A+D+F KRE RE+F+ L+KP +++AWL++
Sbjct: 401 IGECIKSLNAIEEVEQGSELYMFALDLFLKREYREIFLELKKPSLRIAWLQR 437

[Close]

BLAST of Lcy08g012150 vs. TAIR 10
Match: AT3G11290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits to 435 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 79.7 bits (195), Expect = 3.3e-15
Identity = 66/243 (27.16%), Postives = 114/243 (46.91%), Query Frame = 0


Query: 6   LKNKWSALKKDWQIWTDLVGNKTGLGWDPLRQTIDATSEWWEDKLKVKPEAAKFRAKGLQ 65
           LKN W   +K W+IW  ++G    + WD   +T  AT E W++ LK    AA FR K L 
Sbjct: 219 LKNHWDCTRKSWKIWCQVIGAPV-MKWDATSRTFGATDEDWKNYLKENHRAAPFRRKQLP 278

Query: 66  NADQLDILFKDIAVTGDGAWAPSQGFV-------PGSIEGDPSRIGDNDDTIEETEHNDT 125
           +AD+L  +FK +   G   +   +  V       P   +  P      ++ +  +E    
Sbjct: 279 HADKLATIFKGLIEPGKAYFRSYRRRVLDHHSESPQLHDPTPLSTLYTNEPVSGSEGGAD 338

Query: 126 NDDTEYSVHTTGDHTQEKGKKRKRIGSKGSVAHKL---------CNQL--ERVCES-IDA 185
            DD +       D  ++   + +R  S G    +L         C++L  E + ES + A
Sbjct: 339 EDDND-------DDDEQPTPQHRRFNSVGFAESRLQDVEIVTPGCHRLKTELMKESPVSA 398

Query: 186 RRRDVPGCSILEVMNALRGIPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWLK 230
             R     +I E +  L  + E+ +G +L++ A+D+F K+E RE+F+ L+   ++++WL 
Sbjct: 399 SVRQYE-YTIGECIECLDSMEEVEQGSDLYLFALDLFVKKEYREIFLLLKNSSLRMSWLL 452

[Close]

BLAST of Lcy08g012150 vs. TAIR 10
Match: AT3G11310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 575 Blast hits to 342 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 10; Plants - 559; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 4.2e-10
Identity = 78/307 (25.41%), Postives = 119/307 (38.76%), Query Frame = 0


Query: 6   LKNKWSALKKDWQIWTDLVGNKTGLGWDPLRQTIDATSEWWEDKLKVKPEAAKFRAKGLQ 65
           LKN W+  +  W+ W   VG+   L WD   +T  ATSE WE+  K    A +FR K + 
Sbjct: 232 LKNHWNITRDAWRRWCQAVGSPL-LKWDANTKTFGATSEDWENYSKENKRAEQFRLKHIP 291

Query: 66  NADQLDILFKDIAVTGDGAW-----------------APSQGF-----VPGSIEG----- 125
           +AD+L I+FK     G  A                  APS        VPGS  G     
Sbjct: 292 HADKLAIIFKGHVEPGKTALRPYRKRVNHHSEAPQHPAPSSALNINESVPGSEGGADDDH 351

Query: 126 ------------DP--------------SRIGDNDD------TIEETEHN---------- 185
                       DP              S  G +DD       + E+ H+          
Sbjct: 352 HIVMDHHFESPHDPASSSEIDLNEPVTGSEGGADDDHYIVLNHLVESPHDRAPSSELDIN 411

Query: 186 ----------DTNDDTEYSVHTTGDHTQEKGKKRKRIGSKGSVAHKLCNQL-----ERVC 229
                     D ND+ E + H    H    G   +      +V    C ++     E++ 
Sbjct: 412 KPVAGIEGIADDNDNHEPTPH----HWAFNGVGVEESQDVETVTPAPCERINIELVEKIT 471

[Close]

BLAST of Lcy08g012150 vs. TAIR 10
Match: AT2G19220.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 443 Blast hits to 267 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 426; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 4.0e-08
Identity = 50/220 (22.73%), Postives = 99/220 (45.00%), Query Frame = 0


Query: 6   LKNKWSALKKDWQIWTDLVGNKTGLGWDPLRQTIDATSEWWEDKLKVKPEAAKFRAKGLQ 65
           L+N ++  +  W+ W + + +   + WD   +   AT E W+  L +   A  F+ + + 
Sbjct: 219 LENHFTRTRTSWKHWCETIASPI-MKWDANTRKFGATEEDWDKYLMINKRARVFKRRHIP 278

Query: 66  NADQLDILFKDIAVTGDGAWAPSQGFVPGSIEGDPSRIGDNDDTIEETEHNDTNDDTEYS 125
           +AD+L  +FK     G       +  V       P ++ D+  T      N TN+  + S
Sbjct: 279 HADKLATIFKGRIEPGKTKTRRYRKRVIDHHSESP-QLHDHQPTPSSVVVN-TNEPVKGS 338

Query: 126 VHTTGDHTQEKGKKRKRIGSKGSVAHKLCNQLERVCESIDARRRDVPGCSILEVMNALRG 185
                D   E      R  S+          +E++  +   ++++    +  E +  L  
Sbjct: 339 DDRAEDGNVEP-TSLIRSDSEDVAETVTPEMMEKIPVNASVKKKE--KFTFEECVECLDA 398

Query: 186 IPEIVEGGELFMKAVDIFTKRENREMFVALEKPEIQVAWL 226
           I E+ +GG+L+M A+D+F  ++ R +F+ L+K  +++AWL
Sbjct: 399 IEEVEKGGDLYMFALDLFKTKDYRYLFLMLQKSSLRMAWL 432

The following BLAST results are available for this feature:

BLAST of Lcy08g012150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFJ8	4.9e-19	31.90	L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q5Z5Q3	5.8e-04	27.17	Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Lcy08g012150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B4J4	1.1e-85	72.69	LOW QUALITY PROTEIN: L10-interacting MYB domain-containing protein-like OS=Cucum...	[more]
A0A1S3CRV5	1.2e-65	72.43	L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5D3BFL5	3.6e-65	74.72	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A0A0KKV6	2.3e-64	56.33	Myb_DNA-bind_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G167...	[more]
A0A5A7UN70	5.1e-64	56.33	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of Lcy08g012150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441646.2	2.2e-85	72.69	PREDICTED: LOW QUALITY PROTEIN: L10-interacting MYB domain-containing protein-li...	[more]
XP_008466688.2	2.5e-65	72.43	PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo]	[more]
TYJ97917.1	7.4e-65	74.72	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
XP_038874429.1	3.7e-64	58.22	L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_03887...	[more]
XP_004143736.1	4.8e-64	56.33	L10-interacting MYB domain-containing protein [Cucumis sativus] >XP_031740844.1 ...	[more]

BLAST of Lcy08g012150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05800.1	3.4e-20	31.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G05800.2	3.4e-20	31.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11290.1	3.3e-15	27.16	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G11310.1	4.2e-10	25.41	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G19220.1	4.0e-08	22.73	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 6..48 e-value: 1.9E-8 score: 35.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..138
None	No IPR available	PANTHER	PTHR31704:SF37	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 6..227
IPR045026	L10-interacting MYB domain-containing protein	PANTHER	PTHR31704	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 6..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g012150.1	Lcy08g012150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy