Lcy08g009580 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g009580
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Cation/H(+) antiporter 20
Location	Chr08: 26201959 .. 26202557 (-)
RNA-Seq Expression	Lcy08g009580
Synteny	Lcy08g009580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCGCCTTCCCCGTTCTGGCTCGTAGTCTCGCCGAGCTCAAACTCCTCACCACCCAAGTCGGAGAGGCCGCCTTCAACGACGTCGCCGCCTGGATCTTCTTGGCCCTCGTCCTAGCCCTCACTAGCGGGGTCGGCGAAAACCCCTTAGTATCTGTATGGGTCCTACTTTCGGGAGTTGGGTTCGTGGTTTTCATGATGGTAGCGATTCGATCGGCGATGAAACGGATGGCCCGCCGGTTTGCCCCGAAGCAGAAGGCAGCGGAGGAGGCGTACATATGCGTGACGTTGGTGGGGGTTTTGATGGCGGGGCTGGCGACGGATTTCATCGGAATCCACTCGATCTTTGGGGGTTTCGTGTTCGGGTTGATGGTTCAGAAAAGGGGCAGATTCGCGGAGAGATTGATGGAGAGAATCGAAGATTTCGTGTCTGGTCTTCTTCTTCCTCTGTACTTCGCGTCGAGTGGGTTGAAGACAGACATAGGGAAGATTCGTGGGGGAAGGGCTTGGGGGTTGCTGGCGTTGCTGATATCCACGGCATGCGCAGGGAAGATCCTTGCGACGTTTCTGGTGTCCATGGCGTTTCTTATGCCCCCTAG

mRNA sequence

ATGACCGCCTTCCCCGTTCTGGCTCGTAGTCTCGCCGAGCTCAAACTCCTCACCACCCAAGTCGGAGAGGCCGCCTTCAACGACGTCGCCGCCTGGATCTTCTTGGCCCTCGTCCTAGCCCTCACTAGCGGGGTCGGCGAAAACCCCTTAGTATCTGTATGGGTCCTACTTTCGGGAGTTGGCGATTCGATCGGCGATGAAACGGATGGCCCGCCGGTTTGCCCCGAAGCAGAAGGCAGCGGAGGAGGCGTACATATGCGTGACGTTGGTGGGGGTTTTGATGGCGGGGCTGGCGACGGATTTCATCGGAATCCACTCGATCTTTGGGGGTTTCGTGTTCGGGTTGATGGTTCAGAAAAGGGGCAGATTCGCGGAGAGATTGATGGAGAGAATCGAAGATTTCGTGTCTGGTCTTCTTCTTCCTCTGTACTTCGCGTCGAGTGGGTTGAAGACAGACATAGGGAAGATTCGTGGGGGAAGGGCTTGGGGGTTGCTGGCGTTGCTGATATCCACGGCATGCGCAGGGAAGATCCTTGCGACGTTTCTGGTGTCCATGGCGTTTCTTATGCCCCCTAG

Coding sequence (CDS)

ATGACCGCCTTCCCCGTTCTGGCTCGTAGTCTCGCCGAGCTCAAACTCCTCACCACCCAAGTCGGAGAGGCCGCCTTCAACGACGTCGCCGCCTGGATCTTCTTGGCCCTCGTCCTAGCCCTCACTAGCGGGGTCGGCGAAAACCCCTTAGTATCTGTATGGGTCCTACTTTCGGGAGTTGGCGATTCGATCGGCGATGAAACGGATGGCCCGCCGGTTTGCCCCGAAGCAGAAGGCAGCGGAGGAGGCGTACATATGCGTGACGTTGGTGGGGGTTTTGATGGCGGGGCTGGCGACGGATTTCATCGGAATCCACTCGATCTTTGGGGGTTTCGTGTTCGGGTTGATGGTTCAGAAAAGGGGCAGATTCGCGGAGAGATTGATGGAGAGAATCGAAGATTTCGTGTCTGGTCTTCTTCTTCCTCTGTACTTCGCGTCGAGTGGGTTGAAGACAGACATAGGGAAGATTCGTGGGGGAAGGGCTTGGGGGTTGCTGGCGTTGCTGATATCCACGGCATGCGCAGGGAAGATCCTTGCGACGTTTCTGGTGTCCATGGCGTTTCTTATGCCCCCTAG

Protein sequence

MTAFPVLARSLAELKLLTTQVGEAAFNDVAAWIFLALVLALTSGVGENPLVSVWVLLSGVGDSIGDETDGPPVCPEAEGSGGGVHMRDVGGGFDGGAGDGFHRNPLDLWGFRVRVDGSEKGQIRGEIDGENRRFRVWSSSSSVLRVEWVEDRHREDSWGKGLGVAGVADIHGMRREDPCDVSGVHGVSYAP

Homology

[Close]

BLAST of Lcy08g009580 vs. ExPASy Swiss-Prot
Match: Q9M353 (Cation/H(+) antiporter 20 OS=Arabidopsis thaliana OX=3702 GN=CHX20 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-14
Identity = 48/72 (66.67%), Postives = 53/72 (73.61%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGE------NP 60
           +TAFPVLAR LAELKLLTTQ+GE     AAFNDVAAWI LAL +AL    GE      +P
Sbjct: 168 ITAFPVLARILAELKLLTTQIGETAMAAAAFNDVAAWILLALAVALAGNGGEGGGEKKSP 227

Query: 61  LVSVWVLLSGVG 62
           LVS+WVLLSG G
Sbjct: 228 LVSLWVLLSGAG 239

[Close]

BLAST of Lcy08g009580 vs. ExPASy Swiss-Prot
Match: Q9FFR9 (Cation/H(+) antiporter 18 OS=Arabidopsis thaliana OX=3702 GN=CHX18 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-13
Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTT++G      AA NDVAAWI LAL +AL SG   +PLVS+WV
Sbjct: 170 ITAFPVLARILAELKLLTTEIGRLAMSAAAVNDVAAWILLALAIAL-SGSNTSPLVSLWV 229

Query: 61  LLSGVGDSIGDETDGPPV 74
            LSG    IG     PP+
Sbjct: 230 FLSGCAFVIGASFIIPPI 246

[Close]

BLAST of Lcy08g009580 vs. ExPASy Swiss-Prot
Match: Q9LUN4 (Cation/H(+) antiporter 19 OS=Arabidopsis thaliana OX=3702 GN=CHX19 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.3e-13
Identity = 51/90 (56.67%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTT +G      A  NDVAAWI LAL +AL SG G +PLVSVWV
Sbjct: 171 ITAFPVLARILAELKLLTTDIGRMAMSAAGVNDVAAWILLALAIAL-SGDGTSPLVSVWV 230

Query: 61  LLSGVGDSIGDETDGPPV-------CPEAE 79
           LL G G  I       P+       CPE E
Sbjct: 231 LLCGTGFVIFAVVAIKPLLAYMARRCPEGE 259

[Close]

BLAST of Lcy08g009580 vs. ExPASy Swiss-Prot
Match: Q9SUQ7 (Cation/H(+) antiporter 17 OS=Arabidopsis thaliana OX=3702 GN=CHX17 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12
Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAE+KLLTT +G+     AA NDVAAWI LAL +AL SG G +PL S+WV
Sbjct: 169 ITAFPVLARILAEIKLLTTDIGKIALSAAAVNDVAAWILLALAVAL-SGEGSSPLTSLWV 228

Query: 61  LLSGVG 62
            LSG G
Sbjct: 229 FLSGCG 233

[Close]

BLAST of Lcy08g009580 vs. ExPASy Swiss-Prot
Match: Q1HDT3 (Cation/H(+) antiporter 16 OS=Arabidopsis thaliana OX=3702 GN=CHX16 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.5e-10
Identity = 47/93 (50.54%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAF VLAR LAELKLLTT +G      AA NDVAAW+ LAL ++L SG   +PLV +WV
Sbjct: 180 ITAFGVLARILAELKLLTTDLGRISMNAAAINDVAAWVLLALAVSL-SGDRNSPLVPLWV 239

Query: 61  LLSGVGDSIGDETDGPPV-------CPEAEGSG 82
           LLSG+   I      P +       CPE E  G
Sbjct: 240 LLSGIAFVIACFLIVPRIFKFISRRCPEGEPIG 271

[Close]

BLAST of Lcy08g009580 vs. ExPASy TrEMBL
Match: A0A438IQ27 (Cation/H(+) antiporter 20 OS=Vitis vinifera OX=29760 GN=CHX20_4 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.5e-19
Identity = 75/192 (39.06%), Postives = 101/192 (52.60%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTT VG+     AAFNDVAAWI LA  +AL              
Sbjct: 191 ITAFPVLARILAELKLLTTDVGQTAIAAAAFNDVAAWILLAPAVALA------------- 250

Query: 61  LLSGVGDSIGDETDGPPVCPEAEGSGGGVHMRDVGGGFDGGAGDGFHRNPLDLWGFRVRV 120
                            V  EA   G  V++ D+ G       D  +RN   +W  RVR+
Sbjct: 251 -----------------VLAEARFHGRSVYLSDLSGSAAIRVYDRPYRNTRHIWRVRVRI 310

Query: 121 DGSEKGQIRGEIDGENRRFRVWSSSSSVLRVEWVEDRHREDSWGKGLGVAGVADIHGMRR 180
           + S++ +I  EID ++RRFR   +S+++LR +  ED   E++  +G+G  GV DI G+R 
Sbjct: 311 NHSQRRRICREIDKKDRRFRYRLASAALLRFKRTEDGRGENTGREGVGAVGVGDIDGVRG 352

Query: 181 EDPCDVSGVHGV 188
           ED  DV   + V
Sbjct: 371 EDTGDVCSGNAV 352

[Close]

BLAST of Lcy08g009580 vs. ExPASy TrEMBL
Match: A0A498K269 (Na_H_Exchanger domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_026799 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-13
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTT+VGE     AAFND+AAWI LAL +AL  G  ++PLVS+WV
Sbjct: 187 ITAFPVLARILAELKLLTTRVGETAMAAAAFNDIAAWILLALAVALAGGSNKSPLVSIWV 246

Query: 61  LLSGVG 62
           L+SGVG
Sbjct: 247 LISGVG 252

[Close]

BLAST of Lcy08g009580 vs. ExPASy TrEMBL
Match: A0A540KH54 (Na_H_Exchanger domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_040916 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-13
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTT+VGE     AAFND+AAWI LAL +AL  G  ++PLVS+WV
Sbjct: 160 ITAFPVLARILAELKLLTTRVGETAMAAAAFNDIAAWILLALAVALAGGSNKSPLVSIWV 219

Query: 61  LLSGVG 62
           L+SGVG
Sbjct: 220 LISGVG 225

[Close]

BLAST of Lcy08g009580 vs. ExPASy TrEMBL
Match: A0A6A1WK22 (Cation/H(+) antiporter 20 OS=Morella rubra OX=262757 GN=CJ030_MR2G001316 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.5e-13
Identity = 48/65 (73.85%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTTQVGE     AAFNDVAAWI LAL +AL  G  ++PLVSVWV
Sbjct: 167 ITAFPVLARILAELKLLTTQVGETAMAAAAFNDVAAWILLALAVALAGGGNKSPLVSVWV 226

[Close]

BLAST of Lcy08g009580 vs. ExPASy TrEMBL
Match: A0A5N5H7J3 (Cation/H(+) antiporter 20-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_024353 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.0e-13
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTT+VGE     AAFND+AAWI LAL +AL  G  ++PLVS+WV
Sbjct: 167 ITAFPVLARILAELKLLTTRVGETAMAAAAFNDIAAWILLALAVALAGGSHKSPLVSIWV 226

Query: 61  LLSGVG 62
           L+SGVG
Sbjct: 227 LISGVG 232

[Close]

BLAST of Lcy08g009580 vs. NCBI nr
Match: RVW98725.1 (Cation/H(+) antiporter 20 [Vitis vinifera])

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-18
Identity = 75/192 (39.06%), Postives = 101/192 (52.60%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTT VG+     AAFNDVAAWI LA  +AL              
Sbjct: 191 ITAFPVLARILAELKLLTTDVGQTAIAAAAFNDVAAWILLAPAVALA------------- 250

Query: 61  LLSGVGDSIGDETDGPPVCPEAEGSGGGVHMRDVGGGFDGGAGDGFHRNPLDLWGFRVRV 120
                            V  EA   G  V++ D+ G       D  +RN   +W  RVR+
Sbjct: 251 -----------------VLAEARFHGRSVYLSDLSGSAAIRVYDRPYRNTRHIWRVRVRI 310

Query: 121 DGSEKGQIRGEIDGENRRFRVWSSSSSVLRVEWVEDRHREDSWGKGLGVAGVADIHGMRR 180
           + S++ +I  EID ++RRFR   +S+++LR +  ED   E++  +G+G  GV DI G+R 
Sbjct: 311 NHSQRRRICREIDKKDRRFRYRLASAALLRFKRTEDGRGENTGREGVGAVGVGDIDGVRG 352

Query: 181 EDPCDVSGVHGV 188
           ED  DV   + V
Sbjct: 371 EDTGDVCSGNAV 352

[Close]

BLAST of Lcy08g009580 vs. NCBI nr
Match: KAG8382178.1 (hypothetical protein BUALT_Bualt05G0049700 [Buddleja alternifolia])

HSP 1 Score: 95.1 bits (235), Expect = 6.8e-16
Identity = 72/175 (41.14%), Postives = 93/175 (53.14%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTT VG      AA NDVAAWI LAL +AL SG G +P+VS+WV
Sbjct: 7   ITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIAL-SGTGRSPVVSLWV 66

Query: 61  LLSGVGDSIGDETDGPPV-------CPEAEGSGGGVHMRDVGGGFDGGAGDGFHRNPLDL 120
            L G G  +     GPP+       CPE E     ++M  +G GF     + ++RN    
Sbjct: 67  FLCGFGFIMLCIFVGPPIFKWIARRCPEGE-PVDEIYMCYIGFGFGSWICNRYYRNSCAF 126

Query: 121 WGFRVRVDGSEKGQIRGEIDGENRRFRVWSSSSSVLRVEWVEDR----HREDSWG 160
           W         ++G +      ++     W  SS VL V+W+ED+     R  SWG
Sbjct: 127 WRLCDGCSRPKRGPVCWCPCRKSGGSCFWPFSSFVLCVKWIEDKCSHHPRAQSWG 179

[Close]

BLAST of Lcy08g009580 vs. NCBI nr
Match: XP_028956998.1 (LOW QUALITY PROTEIN: cation/H(+) antiporter 20 [Malus domestica])

HSP 1 Score: 86.7 bits (213), Expect = 2.4e-13
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTT+VGE     AAFND+AAWI LAL +AL  G  ++PLVS+WV
Sbjct: 168 ITAFPVLARILAELKLLTTRVGETAMAAAAFNDIAAWILLALAVALAGGSNKSPLVSIWV 227

Query: 61  LLSGVG 62
           L+SGVG
Sbjct: 228 LISGVG 233

[Close]

BLAST of Lcy08g009580 vs. NCBI nr
Match: RXI02269.1 (hypothetical protein DVH24_026799 [Malus domestica])

HSP 1 Score: 86.7 bits (213), Expect = 2.4e-13
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTT+VGE     AAFND+AAWI LAL +AL  G  ++PLVS+WV
Sbjct: 187 ITAFPVLARILAELKLLTTRVGETAMAAAAFNDIAAWILLALAVALAGGSNKSPLVSIWV 246

Query: 61  LLSGVG 62
           L+SGVG
Sbjct: 247 LISGVG 252

[Close]

BLAST of Lcy08g009580 vs. NCBI nr
Match: TQD73541.1 (hypothetical protein C1H46_040916 [Malus baccata])

HSP 1 Score: 86.7 bits (213), Expect = 2.4e-13
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTT+VGE     AAFND+AAWI LAL +AL  G  ++PLVS+WV
Sbjct: 160 ITAFPVLARILAELKLLTTRVGETAMAAAAFNDIAAWILLALAVALAGGSNKSPLVSIWV 219

Query: 61  LLSGVG 62
           L+SGVG
Sbjct: 220 LISGVG 225

[Close]

BLAST of Lcy08g009580 vs. TAIR 10
Match: AT3G53720.1 (cation/H+ exchanger 20 )

HSP 1 Score: 81.3 bits (199), Expect = 9.5e-16
Identity = 48/72 (66.67%), Postives = 53/72 (73.61%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGE------NP 60
           +TAFPVLAR LAELKLLTTQ+GE     AAFNDVAAWI LAL +AL    GE      +P
Sbjct: 168 ITAFPVLARILAELKLLTTQIGETAMAAAAFNDVAAWILLALAVALAGNGGEGGGEKKSP 227

Query: 61  LVSVWVLLSGVG 62
           LVS+WVLLSG G
Sbjct: 228 LVSLWVLLSGAG 239

[Close]

BLAST of Lcy08g009580 vs. TAIR 10
Match: AT5G41610.2 (cation/H+ exchanger 18 )

HSP 1 Score: 76.6 bits (187), Expect = 2.3e-14
Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTT++G      AA NDVAAWI LAL +AL SG   +PLVS+WV
Sbjct: 102 ITAFPVLARILAELKLLTTEIGRLAMSAAAVNDVAAWILLALAIAL-SGSNTSPLVSLWV 161

Query: 61  LLSGVGDSIGDETDGPPV 74
            LSG    IG     PP+
Sbjct: 162 FLSGCAFVIGASFIIPPI 178

[Close]

BLAST of Lcy08g009580 vs. TAIR 10
Match: AT5G41610.1 (cation/H+ exchanger 18 )

HSP 1 Score: 76.6 bits (187), Expect = 2.3e-14
Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTT++G      AA NDVAAWI LAL +AL SG   +PLVS+WV
Sbjct: 170 ITAFPVLARILAELKLLTTEIGRLAMSAAAVNDVAAWILLALAIAL-SGSNTSPLVSLWV 229

Query: 61  LLSGVGDSIGDETDGPPV 74
            LSG    IG     PP+
Sbjct: 230 FLSGCAFVIGASFIIPPI 246

[Close]

BLAST of Lcy08g009580 vs. TAIR 10
Match: AT3G17630.1 (cation/H+ exchanger 19 )

HSP 1 Score: 76.3 bits (186), Expect = 3.1e-14
Identity = 51/90 (56.67%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAELKLLTT +G      A  NDVAAWI LAL +AL SG G +PLVSVWV
Sbjct: 171 ITAFPVLARILAELKLLTTDIGRMAMSAAGVNDVAAWILLALAIAL-SGDGTSPLVSVWV 230

Query: 61  LLSGVGDSIGDETDGPPV-------CPEAE 79
           LL G G  I       P+       CPE E
Sbjct: 231 LLCGTGFVIFAVVAIKPLLAYMARRCPEGE 259

[Close]

BLAST of Lcy08g009580 vs. TAIR 10
Match: AT4G23700.1 (cation/H+ exchanger 17 )

HSP 1 Score: 74.7 bits (182), Expect = 8.9e-14
Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 1   MTAFPVLARSLAELKLLTTQVGE-----AAFNDVAAWIFLALVLALTSGVGENPLVSVWV 60
           +TAFPVLAR LAE+KLLTT +G+     AA NDVAAWI LAL +AL SG G +PL S+WV
Sbjct: 169 ITAFPVLARILAEIKLLTTDIGKIALSAAAVNDVAAWILLALAVAL-SGEGSSPLTSLWV 228

Query: 61  LLSGVG 62
            LSG G
Sbjct: 229 FLSGCG 233

The following BLAST results are available for this feature:

BLAST of Lcy08g009580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M353	1.3e-14	66.67	Cation/H(+) antiporter 20 OS=Arabidopsis thaliana OX=3702 GN=CHX20 PE=2 SV=1	[more]
Q9FFR9	3.3e-13	60.26	Cation/H(+) antiporter 18 OS=Arabidopsis thaliana OX=3702 GN=CHX18 PE=2 SV=1	[more]
Q9LUN4	4.3e-13	56.67	Cation/H(+) antiporter 19 OS=Arabidopsis thaliana OX=3702 GN=CHX19 PE=2 SV=1	[more]
Q9SUQ7	1.3e-12	65.15	Cation/H(+) antiporter 17 OS=Arabidopsis thaliana OX=3702 GN=CHX17 PE=1 SV=1	[more]
Q1HDT3	4.5e-10	50.54	Cation/H(+) antiporter 16 OS=Arabidopsis thaliana OX=3702 GN=CHX16 PE=2 SV=1	[more]

BLAST of Lcy08g009580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438IQ27	5.5e-19	39.06	Cation/H(+) antiporter 20 OS=Vitis vinifera OX=29760 GN=CHX20_4 PE=4 SV=1	[more]
A0A498K269	1.2e-13	69.70	Na_H_Exchanger domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_026...	[more]
A0A540KH54	1.2e-13	69.70	Na_H_Exchanger domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_040...	[more]
A0A6A1WK22	1.5e-13	73.85	Cation/H(+) antiporter 20 OS=Morella rubra OX=262757 GN=CJ030_MR2G001316 PE=4 SV...	[more]
A0A5N5H7J3	2.0e-13	69.70	Cation/H(+) antiporter 20-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 ...	[more]

BLAST of Lcy08g009580 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW98725.1	1.1e-18	39.06	Cation/H(+) antiporter 20 [Vitis vinifera]	[more]
KAG8382178.1	6.8e-16	41.14	hypothetical protein BUALT_Bualt05G0049700 [Buddleja alternifolia]	[more]
XP_028956998.1	2.4e-13	69.70	LOW QUALITY PROTEIN: cation/H(+) antiporter 20 [Malus domestica]	[more]
RXI02269.1	2.4e-13	69.70	hypothetical protein DVH24_026799 [Malus domestica]	[more]
TQD73541.1	2.4e-13	69.70	hypothetical protein C1H46_040916 [Malus baccata]	[more]

BLAST of Lcy08g009580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53720.1	9.5e-16	66.67	cation/H+ exchanger 20	[more]
AT5G41610.2	2.3e-14	60.26	cation/H+ exchanger 18	[more]
AT5G41610.1	2.3e-14	60.26	cation/H+ exchanger 18	[more]
AT3G17630.1	3.1e-14	56.67	cation/H+ exchanger 19	[more]
AT4G23700.1	8.9e-14	65.15	cation/H+ exchanger 17	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038770	Sodium/solute symporter superfamily	GENE3D	1.20.1530.20		coord: 1..61 e-value: 2.3E-6 score: 28.7
None	No IPR available	PANTHER	PTHR32468:SF0	K(+)/H(+) ANTIPORTER 1	coord: 2..61
None	No IPR available	PANTHER	PTHR32468	CATION/H + ANTIPORTER	coord: 2..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g009580.1	Lcy08g009580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0015299	solute:proton antiporter activity