Homology
BLAST of Lcy08g006260 vs. ExPASy Swiss-Prot
Match:
Q8S9M4 (Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H29 PE=2 SV=2)
HSP 1 Score: 284.6 bits (727), Expect = 1.2e-75
Identity = 136/253 (53.75%), Postives = 188/253 (74.31%), Query Frame = 0
Query: 17 SLTVRPLSTKTCSASLQELTSLCNGGRIRQAYERFKSEIWSDPSLFSHILQSCIELGSLL 76
S VRPLS +A + +LC+ G +R+A++RF+ I+++ SLF+ +QSC SL
Sbjct: 6 SSVVRPLSVDPATA----IATLCSKGNLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLP 65
Query: 77 GGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSLVLFTHMPRRNIMSYNILINGYL 136
GKQ+H L++ SG S DKFI NHL+++YSKLG +++ ++ M ++N MS NILINGY+
Sbjct: 66 SGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYV 125
Query: 137 QLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFKEMYGLGFLPDEFTLGI 196
+ GDL + +K+FDEM +R + TWNAMI GL QFEFNE+ LSLF+EM+GLGF PDE+TLG
Sbjct: 126 RAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGS 185
Query: 197 VLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAHMYMKSGSLSDGEKLIKSMPIRN 256
V G AGLRS+ GQ++H +K G EL+ VV SSLAHMYM++G L DGE +I+SMP+RN
Sbjct: 186 VFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRN 245
Query: 257 VVAWNTLIAGSSK 270
+VAWNTLI G+++
Sbjct: 246 LVAWNTLIMGNAQ 254
BLAST of Lcy08g006260 vs. ExPASy Swiss-Prot
Match:
Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 157.9 bits (398), Expect = 1.6e-37
Identity = 81/210 (38.57%), Postives = 128/210 (60.95%), Query Frame = 0
Query: 56 WSDPSLFSHILQSCIELG-SLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSL 115
++D S F+ +L SCI+ S + + VH+ VI SG S + FI N L++ YSK G L+
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 116 VLFTHMPRRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQ 175
+F MP+RNI ++N ++ G +LG L+ LF M ER+ TWN+M++G Q + E+
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 176 ALSLFKEMYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAH 235
AL F M+ GF+ +E++ VL C+GL + G +VH+ + K F + +GS+L
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195
Query: 236 MYMKSGSLSDGEKLIKSMPIRNVVAWNTLI 265
MY K G+++D +++ M RNVV+WN+LI
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLI 225
BLAST of Lcy08g006260 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 148.3 bits (373), Expect = 1.3e-34
Identity = 72/205 (35.12%), Postives = 120/205 (58.54%), Query Frame = 0
Query: 62 FSHILQSCIELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSLVLFTHMP 121
F +L+SC + + G+Q+H V+ GC D ++ L+++Y + G+L+ + +F P
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196
Query: 122 RRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFKE 181
R+++SY LI GY G +E+ QKLFDE+ +++ +WNAMI+G + ++AL LFK+
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256
Query: 182 MYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAHMYMKSGS 241
M PDE T+ V+ CA S+ G++VH + GF N + ++L +Y K G
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 242 LSDGEKLIKSMPIRNVVAWNTLIAG 267
L L + +P ++V++WNTLI G
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGG 341
BLAST of Lcy08g006260 vs. ExPASy Swiss-Prot
Match:
O80488 (Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E70 PE=2 SV=1)
HSP 1 Score: 146.0 bits (367), Expect = 6.5e-34
Identity = 82/215 (38.14%), Postives = 125/215 (58.14%), Query Frame = 0
Query: 55 IWSDPSLFSHILQSCIELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSL 114
IW+D ++ +L+SC L L GK VH +I +G R I ++ LY+ G++ +
Sbjct: 98 IWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQ 157
Query: 115 VLFTHMPRRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQ 174
+F M RN++ +N++I G+ GD+E LF +MSER+I +WN+MI+ L++ + +
Sbjct: 158 KVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDRE 217
Query: 175 ALSLFKEMYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFV-VGSSLA 234
AL LF EM GF PDE T+ VL A L L G+ +H+ G +F+ VG++L
Sbjct: 218 ALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALV 277
Query: 235 HMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGSS 269
Y KSG L + + M RNVV+WNTLI+GS+
Sbjct: 278 DFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSA 312
BLAST of Lcy08g006260 vs. ExPASy Swiss-Prot
Match:
O23169 (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H5 PE=3 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 2.5e-33
Identity = 83/265 (31.32%), Postives = 146/265 (55.09%), Query Frame = 0
Query: 12 FNPLHSLTVRPLSTKTCSASL--QELTSLCNGGRIRQAYERFKSEIWSDPSLFSHILQSC 71
FNP H + + C A+ + + LC +R+A + S + +++Q C
Sbjct: 37 FNPNHE-DGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVC 96
Query: 72 IELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSLVLFTHMPRRNIMSYN 131
+ +L GK+VH + TSG I N LL +Y+K G L + +F MP R++ S+N
Sbjct: 97 SQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWN 156
Query: 132 ILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFKEMYGL-GFL 191
+++NGY ++G LE +KLFDEM+E++ +W AM+TG + + E+AL L+ M +
Sbjct: 157 VMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSR 216
Query: 192 PDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAHMYMKSGSLSDGEKL 251
P+ FT+ I + A ++ +R G+E+H +++ G + + V+ SSL MY K G + + +
Sbjct: 217 PNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNI 276
Query: 252 IKSMPIRNVVAWNTLI---AGSSKW 271
+ ++VV+W ++I SS+W
Sbjct: 277 FDKIVEKDVVSWTSMIDRYFKSSRW 300
BLAST of Lcy08g006260 vs. ExPASy TrEMBL
Match:
A0A6J1HWJ8 (pentatricopeptide repeat-containing protein At2g41080 OS=Cucurbita maxima OX=3661 GN=LOC111468145 PE=3 SV=1)
HSP 1 Score: 487.3 bits (1253), Expect = 4.4e-134
Identity = 242/269 (89.96%), Postives = 255/269 (94.80%), Query Frame = 0
Query: 1 MGKPSLSFNALFNPLHSLTVRPLSTKTCSASLQELTSLCNGGRIRQAYERFKSEIWSDPS 60
MGKPS SF+ALFNPLH+LTVR LSTKT SASLQE TSLC+GGRI QAYERFKSEIWSDPS
Sbjct: 1 MGKPSRSFDALFNPLHALTVRLLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
Query: 61 LFSHILQSCIELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSLVLFTHM 120
LFSH+LQSCI+LGSL GG+QVHSLVITSGC+ DKFISNHLLNLYSKLG LK+SLVLF+ M
Sbjct: 61 LFSHLLQSCIKLGSLFGGEQVHSLVITSGCAYDKFISNHLLNLYSKLGNLKSSLVLFSQM 120
Query: 121 PRRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFK 180
PRRNIMSYNILINGYLQLGDLES QKLFDEMSERNIATWNAMITGLTQFE+NEQALSLF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEYNEQALSLFR 180
Query: 181 EMYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAHMYMKSG 240
EMYGLGFLPDEFTLG VLRGCAGLRSL AGQEVHACLMKCGFELN VVGSSLAHMYMKSG
Sbjct: 181 EMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGSSK 270
SLSDGEKLIKSMPIRNVVAWNTLIAG ++
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQ 269
BLAST of Lcy08g006260 vs. ExPASy TrEMBL
Match:
A0A6J1D3P8 (pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016714 PE=3 SV=1)
HSP 1 Score: 485.7 bits (1249), Expect = 1.3e-133
Identity = 238/269 (88.48%), Postives = 253/269 (94.05%), Query Frame = 0
Query: 1 MGKPSLSFNALFNPLHSLTVRPLSTKTCSASLQELTSLCNGGRIRQAYERFKSEIWSDPS 60
MGKP LSF+ALFNPLH+ VR LSTKT S LQE T+LCNGGRIRQAYE FKSEIWSDPS
Sbjct: 1 MGKPILSFHALFNPLHAPAVRFLSTKTSSVYLQEFTNLCNGGRIRQAYESFKSEIWSDPS 60
Query: 61 LFSHILQSCIELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSLVLFTHM 120
LFSH+LQSCIE+GS+ GGKQ+HSLVITSGCS+DKFISNHLLNLYSKLGQ KTSLVLF+HM
Sbjct: 61 LFSHLLQSCIEIGSIFGGKQLHSLVITSGCSQDKFISNHLLNLYSKLGQFKTSLVLFSHM 120
Query: 121 PRRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFK 180
PRRNIMSYNILINGYLQLGDLES QKLFDEMSERNIATWNAMITGLTQFEFNEQALSLF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFR 180
Query: 181 EMYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAHMYMKSG 240
EMYGLGFLPDEFTLG VLRGCAGLRS+RAGQEVHACLMKCGFELN VVGSS+AHMYMKSG
Sbjct: 181 EMYGLGFLPDEFTLGSVLRGCAGLRSIRAGQEVHACLMKCGFELNLVVGSSVAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGSSK 270
SLSDGEK+IKSMP RNVVAWNTLIAG ++
Sbjct: 241 SLSDGEKVIKSMPTRNVVAWNTLIAGKAQ 269
BLAST of Lcy08g006260 vs. ExPASy TrEMBL
Match:
A0A6J1GM53 (pentatricopeptide repeat-containing protein At2g41080 OS=Cucurbita moschata OX=3662 GN=LOC111455573 PE=3 SV=1)
HSP 1 Score: 484.6 bits (1246), Expect = 2.8e-133
Identity = 239/269 (88.85%), Postives = 253/269 (94.05%), Query Frame = 0
Query: 1 MGKPSLSFNALFNPLHSLTVRPLSTKTCSASLQELTSLCNGGRIRQAYERFKSEIWSDPS 60
MG+PS SF+ALFNPLH+L VR LSTKT SASLQE TSLC+GGRI QAYERFKSEIWSDPS
Sbjct: 1 MGQPSRSFDALFNPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
Query: 61 LFSHILQSCIELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSLVLFTHM 120
LFSH+LQSCI+LGSL GG+QVHSLVITSGC+ DKFISNHLLNLYSKLG LK+SLVLF+HM
Sbjct: 61 LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
Query: 121 PRRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFK 180
PRRNIMSYNILINGYLQLGDLES QKLFDEMSERNIATWNAMITGLTQFE+NEQAL LF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEYNEQALGLFR 180
Query: 181 EMYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAHMYMKSG 240
EMYGLG LPDEFTLG VLRGCAGLRSL AGQEVHACLMKCGFELN VVGSSLAHMYMKSG
Sbjct: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGSSK 270
SLSDGEKLIKSMPIRNVVAWNTLIAG ++
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQ 269
BLAST of Lcy08g006260 vs. ExPASy TrEMBL
Match:
A0A1S3C1T8 (pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495490 PE=3 SV=1)
HSP 1 Score: 456.1 bits (1172), Expect = 1.1e-124
Identity = 228/270 (84.44%), Postives = 247/270 (91.48%), Query Frame = 0
Query: 1 MGKPSLSFNALFNPLHSLTVRPLSTK-TCSASLQELTSLCNGGRIRQAYERFKSEIWSDP 60
MGKPS SFNA NP +S TVR LS K + SASLQE TSLCN GRIRQAY+ FK EIWSDP
Sbjct: 1 MGKPSGSFNAFLNPFYSFTVRSLSMKISSSASLQEFTSLCNDGRIRQAYDTFKVEIWSDP 60
Query: 61 SLFSHILQSCIELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSLVLFTH 120
SLFSH+LQSCI+LGSL GGKQVHSL+ITSG S+DKFISNHLLNLYSKLGQ K+SLVLF++
Sbjct: 61 SLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNLYSKLGQFKSSLVLFSN 120
Query: 121 MPRRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLF 180
MPRRN+MS+NILINGYLQLGDLE+ QKLFDEMSERNIATWNAMI GLTQFEFN+QALSLF
Sbjct: 121 MPRRNLMSFNILINGYLQLGDLENAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLF 180
Query: 181 KEMYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAHMYMKS 240
KEMYGLGFLPDEFTLG VLRGCAGLRSL AGQEVHACL+KCGFEL+ VVGSSLAHMY+KS
Sbjct: 181 KEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKS 240
Query: 241 GSLSDGEKLIKSMPIRNVVAWNTLIAGSSK 270
GSLSDGEKLIKSMPIR VVAWNTLIAG ++
Sbjct: 241 GSLSDGEKLIKSMPIRTVVAWNTLIAGKAQ 270
BLAST of Lcy08g006260 vs. ExPASy TrEMBL
Match:
A0A5A7SLF2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003190 PE=3 SV=1)
HSP 1 Score: 428.3 bits (1100), Expect = 2.4e-116
Identity = 210/241 (87.14%), Postives = 227/241 (94.19%), Query Frame = 0
Query: 29 SASLQELTSLCNGGRIRQAYERFKSEIWSDPSLFSHILQSCIELGSLLGGKQVHSLVITS 88
SASLQE TSLCN GRIRQAY+ FK EIWSDPSLFSH+LQSCI+LGSL GGKQVHSL+ITS
Sbjct: 6 SASLQEFTSLCNDGRIRQAYDTFKFEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITS 65
Query: 89 GCSRDKFISNHLLNLYSKLGQLKTSLVLFTHMPRRNIMSYNILINGYLQLGDLESTQKLF 148
G S+DKFISNHLLNLYSKLGQ K+SLVLF++MPRRN+MS+NILINGYLQLGDLE+ QKLF
Sbjct: 66 GGSKDKFISNHLLNLYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLENAQKLF 125
Query: 149 DEMSERNIATWNAMITGLTQFEFNEQALSLFKEMYGLGFLPDEFTLGIVLRGCAGLRSLR 208
DEMSERNIATWNAMI GLTQFEFN+QALSLFKEMYGLGFLPDEFTLG VLRGCAGLRSL
Sbjct: 126 DEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLL 185
Query: 209 AGQEVHACLMKCGFELNFVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGSS 268
AGQEVHACL+KCGFEL+ VVGSSLAHMY+KSGSLSDGEKLIKSMPIR VVAWNTLIAG +
Sbjct: 186 AGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKA 245
Query: 269 K 270
+
Sbjct: 246 Q 246
BLAST of Lcy08g006260 vs. NCBI nr
Match:
XP_022969026.1 (pentatricopeptide repeat-containing protein At2g41080 [Cucurbita maxima])
HSP 1 Score: 487.3 bits (1253), Expect = 9.0e-134
Identity = 242/269 (89.96%), Postives = 255/269 (94.80%), Query Frame = 0
Query: 1 MGKPSLSFNALFNPLHSLTVRPLSTKTCSASLQELTSLCNGGRIRQAYERFKSEIWSDPS 60
MGKPS SF+ALFNPLH+LTVR LSTKT SASLQE TSLC+GGRI QAYERFKSEIWSDPS
Sbjct: 1 MGKPSRSFDALFNPLHALTVRLLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
Query: 61 LFSHILQSCIELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSLVLFTHM 120
LFSH+LQSCI+LGSL GG+QVHSLVITSGC+ DKFISNHLLNLYSKLG LK+SLVLF+ M
Sbjct: 61 LFSHLLQSCIKLGSLFGGEQVHSLVITSGCAYDKFISNHLLNLYSKLGNLKSSLVLFSQM 120
Query: 121 PRRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFK 180
PRRNIMSYNILINGYLQLGDLES QKLFDEMSERNIATWNAMITGLTQFE+NEQALSLF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEYNEQALSLFR 180
Query: 181 EMYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAHMYMKSG 240
EMYGLGFLPDEFTLG VLRGCAGLRSL AGQEVHACLMKCGFELN VVGSSLAHMYMKSG
Sbjct: 181 EMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGSSK 270
SLSDGEKLIKSMPIRNVVAWNTLIAG ++
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQ 269
BLAST of Lcy08g006260 vs. NCBI nr
Match:
XP_022147886.1 (pentatricopeptide repeat-containing protein At2g41080 isoform X1 [Momordica charantia])
HSP 1 Score: 485.7 bits (1249), Expect = 2.6e-133
Identity = 238/269 (88.48%), Postives = 253/269 (94.05%), Query Frame = 0
Query: 1 MGKPSLSFNALFNPLHSLTVRPLSTKTCSASLQELTSLCNGGRIRQAYERFKSEIWSDPS 60
MGKP LSF+ALFNPLH+ VR LSTKT S LQE T+LCNGGRIRQAYE FKSEIWSDPS
Sbjct: 1 MGKPILSFHALFNPLHAPAVRFLSTKTSSVYLQEFTNLCNGGRIRQAYESFKSEIWSDPS 60
Query: 61 LFSHILQSCIELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSLVLFTHM 120
LFSH+LQSCIE+GS+ GGKQ+HSLVITSGCS+DKFISNHLLNLYSKLGQ KTSLVLF+HM
Sbjct: 61 LFSHLLQSCIEIGSIFGGKQLHSLVITSGCSQDKFISNHLLNLYSKLGQFKTSLVLFSHM 120
Query: 121 PRRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFK 180
PRRNIMSYNILINGYLQLGDLES QKLFDEMSERNIATWNAMITGLTQFEFNEQALSLF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFR 180
Query: 181 EMYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAHMYMKSG 240
EMYGLGFLPDEFTLG VLRGCAGLRS+RAGQEVHACLMKCGFELN VVGSS+AHMYMKSG
Sbjct: 181 EMYGLGFLPDEFTLGSVLRGCAGLRSIRAGQEVHACLMKCGFELNLVVGSSVAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGSSK 270
SLSDGEK+IKSMP RNVVAWNTLIAG ++
Sbjct: 241 SLSDGEKVIKSMPTRNVVAWNTLIAGKAQ 269
BLAST of Lcy08g006260 vs. NCBI nr
Match:
XP_022953052.1 (pentatricopeptide repeat-containing protein At2g41080 [Cucurbita moschata] >KAG6572381.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 484.6 bits (1246), Expect = 5.9e-133
Identity = 239/269 (88.85%), Postives = 253/269 (94.05%), Query Frame = 0
Query: 1 MGKPSLSFNALFNPLHSLTVRPLSTKTCSASLQELTSLCNGGRIRQAYERFKSEIWSDPS 60
MG+PS SF+ALFNPLH+L VR LSTKT SASLQE TSLC+GGRI QAYERFKSEIWSDPS
Sbjct: 1 MGQPSRSFDALFNPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
Query: 61 LFSHILQSCIELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSLVLFTHM 120
LFSH+LQSCI+LGSL GG+QVHSLVITSGC+ DKFISNHLLNLYSKLG LK+SLVLF+HM
Sbjct: 61 LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
Query: 121 PRRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFK 180
PRRNIMSYNILINGYLQLGDLES QKLFDEMSERNIATWNAMITGLTQFE+NEQAL LF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEYNEQALGLFR 180
Query: 181 EMYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAHMYMKSG 240
EMYGLG LPDEFTLG VLRGCAGLRSL AGQEVHACLMKCGFELN VVGSSLAHMYMKSG
Sbjct: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGSSK 270
SLSDGEKLIKSMPIRNVVAWNTLIAG ++
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQ 269
BLAST of Lcy08g006260 vs. NCBI nr
Match:
XP_023553764.1 (pentatricopeptide repeat-containing protein At2g41080 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 482.6 bits (1241), Expect = 2.2e-132
Identity = 238/269 (88.48%), Postives = 252/269 (93.68%), Query Frame = 0
Query: 1 MGKPSLSFNALFNPLHSLTVRPLSTKTCSASLQELTSLCNGGRIRQAYERFKSEIWSDPS 60
MGKPS SF+A F+PLH+L VR LSTKT SASLQE TSLC+GGRI QAYERFKSEIWSDPS
Sbjct: 1 MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
Query: 61 LFSHILQSCIELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSLVLFTHM 120
LFSH+LQSCI+LGSL GG+QVHSLVITSGC+ DKFISNHLLNLYSKLG LK+SLVLF+HM
Sbjct: 61 LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
Query: 121 PRRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFK 180
PRRNIMSYNILINGYLQLGDLES QKLFDEMSERNIATWNAMITGLTQFE+NEQAL LF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEYNEQALGLFR 180
Query: 181 EMYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAHMYMKSG 240
EMYGLG LPDEFTLG VLRGCAGLRSL AGQEVHACLMKCGFELN VVGSSLAHMYMKSG
Sbjct: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGSSK 270
SLSDGEKLIKSMPIRNVVAWNTLIAG ++
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQ 269
BLAST of Lcy08g006260 vs. NCBI nr
Match:
KAG7011986.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 482.6 bits (1241), Expect = 2.2e-132
Identity = 238/269 (88.48%), Postives = 252/269 (93.68%), Query Frame = 0
Query: 1 MGKPSLSFNALFNPLHSLTVRPLSTKTCSASLQELTSLCNGGRIRQAYERFKSEIWSDPS 60
MGKPS SF+A F+PLH+L VR LSTKT SASLQE TSLC+GGRI QAYERFKSEIWSDPS
Sbjct: 1 MGKPSRSFDAFFSPLHALAVRSLSTKTSSASLQEFTSLCSGGRITQAYERFKSEIWSDPS 60
Query: 61 LFSHILQSCIELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSLVLFTHM 120
LFSH+LQSCI+LGSL GG+QVHSLVITSGC+ DKFISNHLLNLYSKLG LK+SLVLF+HM
Sbjct: 61 LFSHLLQSCIKLGSLFGGEQVHSLVITSGCANDKFISNHLLNLYSKLGNLKSSLVLFSHM 120
Query: 121 PRRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFK 180
PRRNIMSYNILINGYLQLGDLES QKLFDEMSERNIATWNAMITGLTQFE+NEQAL LF+
Sbjct: 121 PRRNIMSYNILINGYLQLGDLESAQKLFDEMSERNIATWNAMITGLTQFEYNEQALGLFR 180
Query: 181 EMYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAHMYMKSG 240
EMYGLG LPDEFTLG VLRGCAGLRSL AGQEVHACLMKCGFELN VVGSSLAHMYMKSG
Sbjct: 181 EMYGLGILPDEFTLGSVLRGCAGLRSLLAGQEVHACLMKCGFELNLVVGSSLAHMYMKSG 240
Query: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGSSK 270
SLSDGEKLIKSMPIRNVVAWNTLIAG ++
Sbjct: 241 SLSDGEKLIKSMPIRNVVAWNTLIAGKAQ 269
BLAST of Lcy08g006260 vs. TAIR 10
Match:
AT2G41080.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 213.8 bits (543), Expect = 1.8e-55
Identity = 98/169 (57.99%), Postives = 133/169 (78.70%), Query Frame = 0
Query: 101 LNLYSKLGQLKTSLVLFTHMPRRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWN 160
+++YSKLG +++ ++ M ++N MS NILINGY++ GDL + +K+FDEM +R + TWN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 161 AMITGLTQFEFNEQALSLFKEMYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKC 220
AMI GL QFEFNE+ LSLF+EM+GLGF PDE+TLG V G AGLRS+ GQ++H +K
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 221 GFELNFVVGSSLAHMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGSSK 270
G EL+ VV SSLAHMYM++G L DGE +I+SMP+RN+VAWNTLI G+++
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQ 169
BLAST of Lcy08g006260 vs. TAIR 10
Match:
AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 157.9 bits (398), Expect = 1.2e-38
Identity = 81/210 (38.57%), Postives = 128/210 (60.95%), Query Frame = 0
Query: 56 WSDPSLFSHILQSCIELG-SLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSL 115
++D S F+ +L SCI+ S + + VH+ VI SG S + FI N L++ YSK G L+
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 116 VLFTHMPRRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQ 175
+F MP+RNI ++N ++ G +LG L+ LF M ER+ TWN+M++G Q + E+
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 176 ALSLFKEMYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAH 235
AL F M+ GF+ +E++ VL C+GL + G +VH+ + K F + +GS+L
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195
Query: 236 MYMKSGSLSDGEKLIKSMPIRNVVAWNTLI 265
MY K G+++D +++ M RNVV+WN+LI
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLI 225
BLAST of Lcy08g006260 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 148.3 bits (373), Expect = 9.3e-36
Identity = 72/205 (35.12%), Postives = 120/205 (58.54%), Query Frame = 0
Query: 62 FSHILQSCIELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSLVLFTHMP 121
F +L+SC + + G+Q+H V+ GC D ++ L+++Y + G+L+ + +F P
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196
Query: 122 RRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFKE 181
R+++SY LI GY G +E+ QKLFDE+ +++ +WNAMI+G + ++AL LFK+
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256
Query: 182 MYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAHMYMKSGS 241
M PDE T+ V+ CA S+ G++VH + GF N + ++L +Y K G
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 242 LSDGEKLIKSMPIRNVVAWNTLIAG 267
L L + +P ++V++WNTLI G
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGG 341
BLAST of Lcy08g006260 vs. TAIR 10
Match:
AT1G09190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 146.0 bits (367), Expect = 4.6e-35
Identity = 82/215 (38.14%), Postives = 125/215 (58.14%), Query Frame = 0
Query: 55 IWSDPSLFSHILQSCIELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSL 114
IW+D ++ +L+SC L L GK VH +I +G R I ++ LY+ G++ +
Sbjct: 98 IWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQ 157
Query: 115 VLFTHMPRRNIMSYNILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQ 174
+F M RN++ +N++I G+ GD+E LF +MSER+I +WN+MI+ L++ + +
Sbjct: 158 KVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDRE 217
Query: 175 ALSLFKEMYGLGFLPDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFV-VGSSLA 234
AL LF EM GF PDE T+ VL A L L G+ +H+ G +F+ VG++L
Sbjct: 218 ALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALV 277
Query: 235 HMYMKSGSLSDGEKLIKSMPIRNVVAWNTLIAGSS 269
Y KSG L + + M RNVV+WNTLI+GS+
Sbjct: 278 DFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSA 312
BLAST of Lcy08g006260 vs. TAIR 10
Match:
AT4G37170.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 144.1 bits (362), Expect = 1.7e-34
Identity = 83/265 (31.32%), Postives = 146/265 (55.09%), Query Frame = 0
Query: 12 FNPLHSLTVRPLSTKTCSASL--QELTSLCNGGRIRQAYERFKSEIWSDPSLFSHILQSC 71
FNP H + + C A+ + + LC +R+A + S + +++Q C
Sbjct: 37 FNPNHE-DGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVC 96
Query: 72 IELGSLLGGKQVHSLVITSGCSRDKFISNHLLNLYSKLGQLKTSLVLFTHMPRRNIMSYN 131
+ +L GK+VH + TSG I N LL +Y+K G L + +F MP R++ S+N
Sbjct: 97 SQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWN 156
Query: 132 ILINGYLQLGDLESTQKLFDEMSERNIATWNAMITGLTQFEFNEQALSLFKEMYGL-GFL 191
+++NGY ++G LE +KLFDEM+E++ +W AM+TG + + E+AL L+ M +
Sbjct: 157 VMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSR 216
Query: 192 PDEFTLGIVLRGCAGLRSLRAGQEVHACLMKCGFELNFVVGSSLAHMYMKSGSLSDGEKL 251
P+ FT+ I + A ++ +R G+E+H +++ G + + V+ SSL MY K G + + +
Sbjct: 217 PNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNI 276
Query: 252 IKSMPIRNVVAWNTLI---AGSSKW 271
+ ++VV+W ++I SS+W
Sbjct: 277 FDKIVEKDVVSWTSMIDRYFKSSRW 300
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8S9M4 | 1.2e-75 | 53.75 | Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana OX... | [more] |
Q9SIT7 | 1.6e-37 | 38.57 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... | [more] |
Q9LN01 | 1.3e-34 | 35.12 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O80488 | 6.5e-34 | 38.14 | Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana OX... | [more] |
O23169 | 2.5e-33 | 31.32 | Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HWJ8 | 4.4e-134 | 89.96 | pentatricopeptide repeat-containing protein At2g41080 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1D3P8 | 1.3e-133 | 88.48 | pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Momordica ch... | [more] |
A0A6J1GM53 | 2.8e-133 | 88.85 | pentatricopeptide repeat-containing protein At2g41080 OS=Cucurbita moschata OX=3... | [more] |
A0A1S3C1T8 | 1.1e-124 | 84.44 | pentatricopeptide repeat-containing protein At2g41080 isoform X1 OS=Cucumis melo... | [more] |
A0A5A7SLF2 | 2.4e-116 | 87.14 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
XP_022969026.1 | 9.0e-134 | 89.96 | pentatricopeptide repeat-containing protein At2g41080 [Cucurbita maxima] | [more] |
XP_022147886.1 | 2.6e-133 | 88.48 | pentatricopeptide repeat-containing protein At2g41080 isoform X1 [Momordica char... | [more] |
XP_022953052.1 | 5.9e-133 | 88.85 | pentatricopeptide repeat-containing protein At2g41080 [Cucurbita moschata] >KAG6... | [more] |
XP_023553764.1 | 2.2e-132 | 88.48 | pentatricopeptide repeat-containing protein At2g41080 [Cucurbita pepo subsp. pep... | [more] |
KAG7011986.1 | 2.2e-132 | 88.48 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
AT2G41080.1 | 1.8e-55 | 57.99 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G13600.1 | 1.2e-38 | 38.57 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08070.1 | 9.3e-36 | 35.12 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G09190.1 | 4.6e-35 | 38.14 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G37170.1 | 1.7e-34 | 31.32 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |