Lcy08g004040 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g004040
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Truncated nodule inception protein
Location	Chr08: 5338128 .. 5339037 (-)
RNA-Seq Expression	Lcy08g004040
Synteny	Lcy08g004040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAATGATCAGGCTTCTAATGAACTATAACCAAGCTGCATTGGCGGAGACAGTAGAGTTTATGAACACTCTTAGTAAGACACAAAGATTGCCTTTAGCCCCCACTTGGGCTCCCTGTGCCCAGCAAGCCAAAGCTGGTTGTCGCCACATTGATAACTATCTCGACTGCGTTTCGACTGTCGAAACTGCTTGCTTCATGGCTGAGGTCAACACATTAGGCTTCCATGAGGTCTACTCCGACCTATCACATCCTCATGGCCACGGTATCGTTGGAATAACCATTGCAACCAACAAGCCATGCTTTCCAGTTGACATCATTGTCGAGCATCCTCTTGCGCTGGATTGTTTGGGCTCTCAGCTGCAGTGGCCATCCTCCTTCAGAGTGTGCTATTATACCAAGGTGTCAATGGATTTTGTGTCAGTTTCTTGCCAAAGGATTGCCATGACAACAATGAAGAAAGGCGGATGTTGAATTCATTATCGATCGTTTTGCAGCAGAATTCTCGGAGTTTGCACGTGGTTATGGACGAAGATATGGAAGATGAATTCAACAAAAATGGAAGAGTACTGATCAATGAAAAACCTCACAGATTGGGCTCAGTTTCAATGGAGGATTCTTGTCCAAAACAGTCTTCTTGGGATGCACACATGATGGAGGTTCAACAGAGAGGCAAAGCGTTTCAATGTCTTTGGAGTATCAAACTGAAGAAACAAGGGAAGAGTTTAAGGTGACAAATCATTGGGATAGTACTGCTCATGGGGAGATATCAAATGGGCAGGTATTTGTAGATTTTGATCACCTTCAACAAACATCTAGATCGAAAGGCAACATTAAGGGTGGTGGAGATTCTTATCCATACAATAGTCGTCAGATCCCAGGTGGTCGAAAAGTTGGCAAGAAGAGATGA

mRNA sequence

ATGCCAATGATCAGGCTTCTAATGAACTATAACCAAGCTGCATTGGCGGAGACAGTAGAGTTTATGAACACTCTTAGTAAGACACAAAGATTGCCTTTAGCCCCCACTTGGGCTCCCTGTGCCCAGCAAGCCAAAGCTGGTTGTCGCCACATTGATAACTATCTCGACTGCGTTTCGACTGTCGAAACTGCTTGCTTCATGGCTGAGGTCAACACATTAGGCTTCCATGAGGTCTACTCCGACCTATCACATCCTCATGGCCACGGTATCGTTGGAATAACCATTGCAACCAACAAGCCATGCTTTCCAGTTGACATCATTGTCGAGCATCCTCTTGCGCTGGATTGTTTGGGCTCTCAGCTGCAGTGGCCATCCTCCTTCAGAGTGTGCTATTATACCAAGATTGGGCTCAGTTTCAATGGAGGATTCTTGTCCAAAACAGTCTTCTTGGGATGCACACATGATGGAGGTTCAACAGAGAGGCAAAGCGTTTCAATGTCTTTGGAGTATCAAACTGAAGAAACAAGGGAAGAGTTTAAGGTGACAAATCATTGGGATAGTACTGCTCATGGGGAGATATCAAATGGGCAGGTATTTGTAGATTTTGATCACCTTCAACAAACATCTAGATCGAAAGGCAACATTAAGGGTGGTGGAGATTCTTATCCATACAATAGTCGTCAGATCCCAGGTGGTCGAAAAGTTGGCAAGAAGAGATGA

Coding sequence (CDS)

ATGCCAATGATCAGGCTTCTAATGAACTATAACCAAGCTGCATTGGCGGAGACAGTAGAGTTTATGAACACTCTTAGTAAGACACAAAGATTGCCTTTAGCCCCCACTTGGGCTCCCTGTGCCCAGCAAGCCAAAGCTGGTTGTCGCCACATTGATAACTATCTCGACTGCGTTTCGACTGTCGAAACTGCTTGCTTCATGGCTGAGGTCAACACATTAGGCTTCCATGAGGTCTACTCCGACCTATCACATCCTCATGGCCACGGTATCGTTGGAATAACCATTGCAACCAACAAGCCATGCTTTCCAGTTGACATCATTGTCGAGCATCCTCTTGCGCTGGATTGTTTGGGCTCTCAGCTGCAGTGGCCATCCTCCTTCAGAGTGTGCTATTATACCAAGATTGGGCTCAGTTTCAATGGAGGATTCTTGTCCAAAACAGTCTTCTTGGGATGCACACATGATGGAGGTTCAACAGAGAGGCAAAGCGTTTCAATGTCTTTGGAGTATCAAACTGAAGAAACAAGGGAAGAGTTTAAGGTGACAAATCATTGGGATAGTACTGCTCATGGGGAGATATCAAATGGGCAGGTATTTGTAGATTTTGATCACCTTCAACAAACATCTAGATCGAAAGGCAACATTAAGGGTGGTGGAGATTCTTATCCATACAATAGTCGTCAGATCCCAGGTGGTCGAAAAGTTGGCAAGAAGAGATGA

Protein sequence

MPMIRLLMNYNQAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHIDNYLDCVSTVETACFMAEVNTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDIIVEHPLALDCLGSQLQWPSSFRVCYYTKIGLSFNGGFLSKTVFLGCTHDGGSTERQSVSMSLEYQTEETREEFKVTNHWDSTAHGEISNGQVFVDFDHLQQTSRSKGNIKGGGDSYPYNSRQIPGGRKVGKKR

Homology

[Close]

BLAST of Lcy08g004040 vs. ExPASy Swiss-Prot
Match: Q9SFW8 (Protein NLP5 OS=Arabidopsis thaliana OX=3702 GN=NLP5 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-17
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 12  QAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVSTVETACFMAEV 71
           QAAL E    +    +T +LPLA TW  C +Q+K GCRH D NY+ CVST++ AC++ + 
Sbjct: 288 QAALPEIRNLLRCACETHKLPLAQTWVSCLKQSKTGCRHNDENYIHCVSTIDDACYVGDP 347

Query: 72  NTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDI 107
               FHE  S+     G G+VG    TN PCF  D+
Sbjct: 348 TVREFHEACSEHHLLKGQGVVGEAFLTNGPCFSSDV 383

[Close]

BLAST of Lcy08g004040 vs. ExPASy Swiss-Prot
Match: Q10S83 (Protein NLP1 OS=Oryza sativa subsp. japonica OX=39947 GN=NLP1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.7e-17
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 0


Query: 12  QAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVSTVETACFMAEV 71
           +A + E ++ +  +  T  LPLA TW PC  QAK G RH D +Y  CVSTV+ AC++ + 
Sbjct: 308 RAIIPEIMDVLRAVCDTHNLPLAQTWIPCICQAKRGSRHSDESYKHCVSTVDEACYVRDC 367

Query: 72  NTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDI 107
           + LGFH+  S+     G G+VG    TN+PCF  DI
Sbjct: 368 SVLGFHQACSEHHLFRGEGVVGRAFGTNEPCFSPDI 403

[Close]

BLAST of Lcy08g004040 vs. ExPASy Swiss-Prot
Match: Q9LE38 (Protein NLP4 OS=Arabidopsis thaliana OX=3702 GN=NLP4 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-16
Identity = 41/96 (42.71%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 12  QAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVSTVETACFMAEV 71
           +AAL E    +    +T +LPLA TW  C QQ K+GCRH D NY+ CVST++ AC++ + 
Sbjct: 283 KAALPEIRNLLRCACETHKLPLAQTWVSCQQQNKSGCRHNDENYIHCVSTIDDACYVGDP 342

Query: 72  NTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDI 107
               FHE  S+     G G+ G    TN PCF  D+
Sbjct: 343 TVREFHEACSEHHLLKGQGVAGQAFLTNGPCFSSDV 378

[Close]

BLAST of Lcy08g004040 vs. ExPASy Swiss-Prot
Match: Q7X9B9 (Protein NLP2 OS=Arabidopsis thaliana OX=3702 GN=NLP2 PE=2 SV=3)

HSP 1 Score: 76.3 bits (186), Expect = 5.4e-13
Identity = 47/120 (39.17%), Postives = 62/120 (51.67%), Query Frame = 0


Query: 2   PMIRLLMNYNQ---AALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDC 61
           P    L  YN+   AAL E  EF+  + +   LPLA TWAPCA+Q K G RH D N+ +C
Sbjct: 320 PSREFLQVYNEFYYAALPEVSEFLTLVCRVYDLPLALTWAPCARQGKVGSRHSDENFSEC 379

Query: 62  VSTVETACFMAEVNTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDII----VEHPLA 114
           VSTV+ AC + +  +  F E  S+     G GIVG      K  F  ++       +PLA
Sbjct: 380 VSTVDDACIVPDHQSRHFLEACSEHHLLQGEGIVGKAFNATKLFFVPEVTTFSKTNYPLA 439

[Close]

BLAST of Lcy08g004040 vs. ExPASy Swiss-Prot
Match: Q8H111 (Protein NLP1 OS=Arabidopsis thaliana OX=3702 GN=NLP1 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.7e-12
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 4   IRLLMNYNQAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVSTVE 63
           +++  ++  AAL E  +F+ T+ ++   PLA +WAPCA+Q K G RH D N+ +CVST++
Sbjct: 296 LQVYSDFYCAALPEIKDFLATICRSYDFPLALSWAPCARQGKVGSRHSDENFSECVSTID 355

Query: 64  TACFMAEVNTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDII----VEHPLA 114
           +AC + +  +  F E  S+     G GIVG      K  F  ++       +PLA
Sbjct: 356 SACSVPDEQSKSFWEACSEHHLLQGEGIVGKAFEATKLFFVPEVATFSKTNYPLA 410

[Close]

BLAST of Lcy08g004040 vs. ExPASy TrEMBL
Match: T1SBU4 (Nodule inception protein 1 OS=Datisca glomerata OX=34297 GN=NIN1 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.4e-40
Identity = 113/301 (37.54%), Postives = 154/301 (51.16%), Query Frame = 0


Query: 2   PMIRLLMNYNQAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGC-RHID-NYLDCVS 61
           P I+      QAAL E VE + ++ KT RLPLA TWAPC+QQ K GC +H D N+  CVS
Sbjct: 292 PTIKGFDELYQAALGEIVEVLTSVCKTHRLPLALTWAPCSQQGKTGCYKHSDGNFAPCVS 351

Query: 62  TVETACFMAEVNTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDI------------- 121
           TVE+AC++AEV+TLGFHE   +     G GIVG +  TNKPCF VDI             
Sbjct: 352 TVESACYVAEVDTLGFHEACLEQHLFKGQGIVGTSFTTNKPCFAVDITAFSKNEYPFCHH 411

Query: 122 ------------------------IVEHPLALDCLGSQLQ----------WPSSFRVCYY 181
                                   ++E  L  DC  ++ Q             S R  + 
Sbjct: 412 ARIFGLRAAIAIPVRSTYTGSADFVLEFFLPKDCEDNEEQKRMLNSLSIVIQQSCRSLHI 471

Query: 182 T--------------KIGLSFNGGFLSKTVFLGCTHDGGSTERQSVSMSLEYQTEETREE 240
                          ++  +    F  ++ ++    +    + + +S+S+EYQ EE REE
Sbjct: 472 ATDNKEVDGEENIVPQVSAASEASFPKESSWIAHMIE-AQQKGKGISVSMEYQIEEPREE 531

[Close]

BLAST of Lcy08g004040 vs. ExPASy TrEMBL
Match: A0A6A1WFW4 (Protein NLP2 OS=Morella rubra OX=262757 GN=CJ030_MR2G002409 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.0e-39
Identity = 120/317 (37.85%), Postives = 147/317 (46.37%), Query Frame = 0


Query: 2   PMIRLLMNYNQAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVST 61
           P ++      QAALAE VE + ++ KT RLPLA TWAPC QQ K GCRH D NY  CVST
Sbjct: 289 PGVKAYDELYQAALAEIVEVLASVCKTHRLPLALTWAPCLQQGKVGCRHSDENYAHCVST 348

Query: 62  VETACFMAEVNTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDII----VEHPLA--- 121
           V+TACF+A++  LGFHE  S+     G G VG    T KPCF  DI      E+PL+   
Sbjct: 349 VDTACFVADLEVLGFHEACSEYHLFRGQGTVGTAFTTTKPCFATDITAFSKTEYPLSHHA 408

Query: 122 ------------------------------------------LDCLGSQLQWPSSFRVCY 181
                                                     L+ L   LQ         
Sbjct: 409 RMFGLRAAVAIPLRSIYTGSADFVLEFFLPKDCQDPEEQKQMLNSLSIVLQQACRSLHAV 468

Query: 182 YTKIGLSFNGGFLSKTVFLGC--------THDGGST---------------------ERQ 240
             K        +  K V +G         TH  GS+                     + +
Sbjct: 469 IDKEVEEEEVIYPVKEVVIGSDLRIKKEETHKSGSSPLKEASPKESSWIAHMMEAQQKGK 528

[Close]

BLAST of Lcy08g004040 vs. ExPASy TrEMBL
Match: A0A6P5SD72 (LOW QUALITY PROTEIN: protein NLP2-like OS=Prunus avium OX=42229 GN=LOC110754710 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.6e-39
Identity = 115/308 (37.34%), Postives = 147/308 (47.73%), Query Frame = 0


Query: 12  QAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVSTVETACFMAEV 71
           QAAL E VE + ++ KT RLPLA TWAPC QQ K GCRH D NY  CVSTV+ ACF+A++
Sbjct: 227 QAALTEIVEVLASVCKTHRLPLAQTWAPCIQQGKGGCRHSDENYAHCVSTVDAACFVADL 286

Query: 72  NTLGFHEVYSDLSHPHGHGIVGITIATNKPCF---------------------------- 131
           + LG HE  S+     G GIVG    TNKPCF                            
Sbjct: 287 DILGLHEACSEHHLCRGQGIVGAAFTTNKPCFATDIKAFSKTEYPLSHHARMFGLHAAVA 346

Query: 132 ---------PVDIIVEHPLALDCLG--SQLQWPSSF-----RVCYYTKIG----LSFNGG 191
                    P D ++E  L  DC     Q Q  +S      + C+   +     L     
Sbjct: 347 IPFRSVCTGPADFVLEFFLPKDCQDPEEQKQMLNSLCIVIQQACWSLHVDVDKELEEEIM 406

Query: 192 FLSKTVFLGCTHDGGSTERQS-------------------------------VSMSLEYQ 240
           F  +   +G   DGG  E ++                               VS+SL+YQ
Sbjct: 407 FPIREPVIG--SDGGLHEEETQRLISSPTEEPSGKESSWIAHMIEAQQKGKGVSVSLDYQ 466

[Close]

BLAST of Lcy08g004040 vs. ExPASy TrEMBL
Match: A0A2P5CYX9 (NIN transcription factor OS=Parasponia andersonii OX=3476 GN=PanNIN PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 116/324 (35.80%), Postives = 148/324 (45.68%), Query Frame = 0


Query: 2   PMIRLLMNYNQAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVST 61
           P +++     QAAL+E VE + ++ K  RLPLA TWAPC QQ K GCRH D NY  CVST
Sbjct: 19  PAVKVCDELYQAALSEIVEVLVSVCKIHRLPLALTWAPCHQQGKGGCRHSDENYTRCVST 78

Query: 62  VETACFMAEVNTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDI-------------- 121
           V+ ACF++ +  LGFHE  S+     G GIVG    TNKPCF  DI              
Sbjct: 79  VDLACFVSNLEILGFHEACSEHHLFRGQGIVGTAFTTNKPCFATDITAFSKTEYPLSHHA 138

Query: 122 -----------------------IVEHPLALDCLG--SQLQWPSSFRVCYY--------- 181
                                  ++E  L  DC     Q Q  +S  +            
Sbjct: 139 RMFGLRAAVAIPLRSVYTSSSDFVLEFFLPKDCQDPEEQKQMLNSLSIVIQQACRSLHVV 198

Query: 182 ---------------TKIGLSFNGGF-------LSKTVFLGCTHDGGSTERQS------- 240
                            I  S  GG         + T    C     S+ ++S       
Sbjct: 199 EKELEEEQIMLPNGDPAIVASSEGGLKLGTPTTATTTNTTTCPVGDQSSGKESSWVAHMM 258

[Close]

BLAST of Lcy08g004040 vs. ExPASy TrEMBL
Match: A0A2P5CYY1 (NIN transcription factor OS=Parasponia andersonii OX=3476 GN=PanNIN PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 116/324 (35.80%), Postives = 148/324 (45.68%), Query Frame = 0


Query: 2   PMIRLLMNYNQAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVST 61
           P +++     QAAL+E VE + ++ K  RLPLA TWAPC QQ K GCRH D NY  CVST
Sbjct: 313 PAVKVCDELYQAALSEIVEVLVSVCKIHRLPLALTWAPCHQQGKGGCRHSDENYTRCVST 372

Query: 62  VETACFMAEVNTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDI-------------- 121
           V+ ACF++ +  LGFHE  S+     G GIVG    TNKPCF  DI              
Sbjct: 373 VDLACFVSNLEILGFHEACSEHHLFRGQGIVGTAFTTNKPCFATDITAFSKTEYPLSHHA 432

Query: 122 -----------------------IVEHPLALDCLG--SQLQWPSSFRVCYY--------- 181
                                  ++E  L  DC     Q Q  +S  +            
Sbjct: 433 RMFGLRAAVAIPLRSVYTSSSDFVLEFFLPKDCQDPEEQKQMLNSLSIVIQQACRSLHVV 492

Query: 182 ---------------TKIGLSFNGGF-------LSKTVFLGCTHDGGSTERQS------- 240
                            I  S  GG         + T    C     S+ ++S       
Sbjct: 493 EKELEEEQIMLPNGDPAIVASSEGGLKLGTPTTATTTNTTTCPVGDQSSGKESSWVAHMM 552

[Close]

BLAST of Lcy08g004040 vs. NCBI nr
Match: AGR88904.1 (nodule inception protein 1 [Datisca glomerata])

HSP 1 Score: 175.6 bits (444), Expect = 5.0e-40
Identity = 113/301 (37.54%), Postives = 154/301 (51.16%), Query Frame = 0


Query: 2   PMIRLLMNYNQAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGC-RHID-NYLDCVS 61
           P I+      QAAL E VE + ++ KT RLPLA TWAPC+QQ K GC +H D N+  CVS
Sbjct: 292 PTIKGFDELYQAALGEIVEVLTSVCKTHRLPLALTWAPCSQQGKTGCYKHSDGNFAPCVS 351

Query: 62  TVETACFMAEVNTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDI------------- 121
           TVE+AC++AEV+TLGFHE   +     G GIVG +  TNKPCF VDI             
Sbjct: 352 TVESACYVAEVDTLGFHEACLEQHLFKGQGIVGTSFTTNKPCFAVDITAFSKNEYPFCHH 411

Query: 122 ------------------------IVEHPLALDCLGSQLQ----------WPSSFRVCYY 181
                                   ++E  L  DC  ++ Q             S R  + 
Sbjct: 412 ARIFGLRAAIAIPVRSTYTGSADFVLEFFLPKDCEDNEEQKRMLNSLSIVIQQSCRSLHI 471

Query: 182 T--------------KIGLSFNGGFLSKTVFLGCTHDGGSTERQSVSMSLEYQTEETREE 240
                          ++  +    F  ++ ++    +    + + +S+S+EYQ EE REE
Sbjct: 472 ATDNKEVDGEENIVPQVSAASEASFPKESSWIAHMIE-AQQKGKGISVSMEYQIEEPREE 531

[Close]

BLAST of Lcy08g004040 vs. NCBI nr
Match: KAB1223276.1 (Protein NLP2 [Morella rubra])

HSP 1 Score: 172.6 bits (436), Expect = 4.2e-39
Identity = 120/317 (37.85%), Postives = 147/317 (46.37%), Query Frame = 0


Query: 2   PMIRLLMNYNQAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVST 61
           P ++      QAALAE VE + ++ KT RLPLA TWAPC QQ K GCRH D NY  CVST
Sbjct: 289 PGVKAYDELYQAALAEIVEVLASVCKTHRLPLALTWAPCLQQGKVGCRHSDENYAHCVST 348

Query: 62  VETACFMAEVNTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDII----VEHPLA--- 121
           V+TACF+A++  LGFHE  S+     G G VG    T KPCF  DI      E+PL+   
Sbjct: 349 VDTACFVADLEVLGFHEACSEYHLFRGQGTVGTAFTTTKPCFATDITAFSKTEYPLSHHA 408

Query: 122 ------------------------------------------LDCLGSQLQWPSSFRVCY 181
                                                     L+ L   LQ         
Sbjct: 409 RMFGLRAAVAIPLRSIYTGSADFVLEFFLPKDCQDPEEQKQMLNSLSIVLQQACRSLHAV 468

Query: 182 YTKIGLSFNGGFLSKTVFLGC--------THDGGST---------------------ERQ 240
             K        +  K V +G         TH  GS+                     + +
Sbjct: 469 IDKEVEEEEVIYPVKEVVIGSDLRIKKEETHKSGSSPLKEASPKESSWIAHMMEAQQKGK 528

[Close]

BLAST of Lcy08g004040 vs. NCBI nr
Match: XP_021811506.1 (LOW QUALITY PROTEIN: protein NLP2-like [Prunus avium])

HSP 1 Score: 171.4 bits (433), Expect = 9.4e-39
Identity = 115/308 (37.34%), Postives = 147/308 (47.73%), Query Frame = 0


Query: 12  QAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVSTVETACFMAEV 71
           QAAL E VE + ++ KT RLPLA TWAPC QQ K GCRH D NY  CVSTV+ ACF+A++
Sbjct: 227 QAALTEIVEVLASVCKTHRLPLAQTWAPCIQQGKGGCRHSDENYAHCVSTVDAACFVADL 286

Query: 72  NTLGFHEVYSDLSHPHGHGIVGITIATNKPCF---------------------------- 131
           + LG HE  S+     G GIVG    TNKPCF                            
Sbjct: 287 DILGLHEACSEHHLCRGQGIVGAAFTTNKPCFATDIKAFSKTEYPLSHHARMFGLHAAVA 346

Query: 132 ---------PVDIIVEHPLALDCLG--SQLQWPSSF-----RVCYYTKIG----LSFNGG 191
                    P D ++E  L  DC     Q Q  +S      + C+   +     L     
Sbjct: 347 IPFRSVCTGPADFVLEFFLPKDCQDPEEQKQMLNSLCIVIQQACWSLHVDVDKELEEEIM 406

Query: 192 FLSKTVFLGCTHDGGSTERQS-------------------------------VSMSLEYQ 240
           F  +   +G   DGG  E ++                               VS+SL+YQ
Sbjct: 407 FPIREPVIG--SDGGLHEEETQRLISSPTEEPSGKESSWIAHMIEAQQKGKGVSVSLDYQ 466

[Close]

BLAST of Lcy08g004040 vs. NCBI nr
Match: PON66248.1 (NIN transcription factor [Parasponia andersonii])

HSP 1 Score: 166.8 bits (421), Expect = 2.3e-37
Identity = 116/324 (35.80%), Postives = 148/324 (45.68%), Query Frame = 0


Query: 2   PMIRLLMNYNQAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVST 61
           P +++     QAAL+E VE + ++ K  RLPLA TWAPC QQ K GCRH D NY  CVST
Sbjct: 313 PAVKVCDELYQAALSEIVEVLVSVCKIHRLPLALTWAPCHQQGKGGCRHSDENYTRCVST 372

Query: 62  VETACFMAEVNTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDI-------------- 121
           V+ ACF++ +  LGFHE  S+     G GIVG    TNKPCF  DI              
Sbjct: 373 VDLACFVSNLEILGFHEACSEHHLFRGQGIVGTAFTTNKPCFATDITAFSKTEYPLSHHA 432

Query: 122 -----------------------IVEHPLALDCLG--SQLQWPSSFRVCYY--------- 181
                                  ++E  L  DC     Q Q  +S  +            
Sbjct: 433 RMFGLRAAVAIPLRSVYTSSSDFVLEFFLPKDCQDPEEQKQMLNSLSIVIQQACRSLHVV 492

Query: 182 ---------------TKIGLSFNGGF-------LSKTVFLGCTHDGGSTERQS------- 240
                            I  S  GG         + T    C     S+ ++S       
Sbjct: 493 EKELEEEQIMLPNGDPAIVASSEGGLKLGTPTTATTTNTTTCPVGDQSSGKESSWVAHMM 552

[Close]

BLAST of Lcy08g004040 vs. NCBI nr
Match: PON66249.1 (NIN transcription factor [Parasponia andersonii])

HSP 1 Score: 166.8 bits (421), Expect = 2.3e-37
Identity = 116/324 (35.80%), Postives = 148/324 (45.68%), Query Frame = 0


Query: 2   PMIRLLMNYNQAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVST 61
           P +++     QAAL+E VE + ++ K  RLPLA TWAPC QQ K GCRH D NY  CVST
Sbjct: 19  PAVKVCDELYQAALSEIVEVLVSVCKIHRLPLALTWAPCHQQGKGGCRHSDENYTRCVST 78

Query: 62  VETACFMAEVNTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDI-------------- 121
           V+ ACF++ +  LGFHE  S+     G GIVG    TNKPCF  DI              
Sbjct: 79  VDLACFVSNLEILGFHEACSEHHLFRGQGIVGTAFTTNKPCFATDITAFSKTEYPLSHHA 138

Query: 122 -----------------------IVEHPLALDCLG--SQLQWPSSFRVCYY--------- 181
                                  ++E  L  DC     Q Q  +S  +            
Sbjct: 139 RMFGLRAAVAIPLRSVYTSSSDFVLEFFLPKDCQDPEEQKQMLNSLSIVIQQACRSLHVV 198

Query: 182 ---------------TKIGLSFNGGF-------LSKTVFLGCTHDGGSTERQS------- 240
                            I  S  GG         + T    C     S+ ++S       
Sbjct: 199 EKELEEEQIMLPNGDPAIVASSEGGLKLGTPTTATTTNTTTCPVGDQSSGKESSWVAHMM 258

[Close]

BLAST of Lcy08g004040 vs. TAIR 10
Match: AT1G76350.1 (Plant regulator RWP-RK family protein )

HSP 1 Score: 90.5 bits (223), Expect = 2.0e-18
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 12  QAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVSTVETACFMAEV 71
           QAAL E    +    +T +LPLA TW  C +Q+K GCRH D NY+ CVST++ AC++ + 
Sbjct: 288 QAALPEIRNLLRCACETHKLPLAQTWVSCLKQSKTGCRHNDENYIHCVSTIDDACYVGDP 347

Query: 72  NTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDI 107
               FHE  S+     G G+VG    TN PCF  D+
Sbjct: 348 TVREFHEACSEHHLLKGQGVVGEAFLTNGPCFSSDV 383

[Close]

BLAST of Lcy08g004040 vs. TAIR 10
Match: AT1G20640.1 (Plant regulator RWP-RK family protein )

HSP 1 Score: 88.2 bits (217), Expect = 9.8e-18
Identity = 41/96 (42.71%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 12  QAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVSTVETACFMAEV 71
           +AAL E    +    +T +LPLA TW  C QQ K+GCRH D NY+ CVST++ AC++ + 
Sbjct: 283 KAALPEIRNLLRCACETHKLPLAQTWVSCQQQNKSGCRHNDENYIHCVSTIDDACYVGDP 342

Query: 72  NTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDI 107
               FHE  S+     G G+ G    TN PCF  D+
Sbjct: 343 TVREFHEACSEHHLLKGQGVAGQAFLTNGPCFSSDV 378

[Close]

BLAST of Lcy08g004040 vs. TAIR 10
Match: AT1G20640.2 (Plant regulator RWP-RK family protein )

HSP 1 Score: 88.2 bits (217), Expect = 9.8e-18
Identity = 41/96 (42.71%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 12  QAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVSTVETACFMAEV 71
           +AAL E    +    +T +LPLA TW  C QQ K+GCRH D NY+ CVST++ AC++ + 
Sbjct: 283 KAALPEIRNLLRCACETHKLPLAQTWVSCQQQNKSGCRHNDENYIHCVSTIDDACYVGDP 342

Query: 72  NTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDI 107
               FHE  S+     G G+ G    TN PCF  D+
Sbjct: 343 TVREFHEACSEHHLLKGQGVAGQAFLTNGPCFSSDV 378

[Close]

BLAST of Lcy08g004040 vs. TAIR 10
Match: AT4G35270.1 (Plant regulator RWP-RK family protein )

HSP 1 Score: 76.3 bits (186), Expect = 3.8e-14
Identity = 47/120 (39.17%), Postives = 62/120 (51.67%), Query Frame = 0


Query: 2   PMIRLLMNYNQ---AALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDC 61
           P    L  YN+   AAL E  EF+  + +   LPLA TWAPCA+Q K G RH D N+ +C
Sbjct: 320 PSREFLQVYNEFYYAALPEVSEFLTLVCRVYDLPLALTWAPCARQGKVGSRHSDENFSEC 379

Query: 62  VSTVETACFMAEVNTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDII----VEHPLA 114
           VSTV+ AC + +  +  F E  S+     G GIVG      K  F  ++       +PLA
Sbjct: 380 VSTVDDACIVPDHQSRHFLEACSEHHLLQGEGIVGKAFNATKLFFVPEVTTFSKTNYPLA 439

[Close]

BLAST of Lcy08g004040 vs. TAIR 10
Match: AT2G17150.2 (Plant regulator RWP-RK family protein )

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-13
Identity = 41/117 (35.04%), Postives = 63/117 (53.85%), Query Frame = 0


Query: 2   PMIRLLMNYNQAALAETVEFMNTLSKTQRLPLAPTWAPCAQQAKAGCRHID-NYLDCVST 61
           P   +  ++  AAL E  +F+ T+ ++   PLA +WAPCA+Q K G RH D N+ +CVST
Sbjct: 291 PSSEVYSDFYCAALPEIKDFLATICRSYDFPLALSWAPCARQGKVGSRHSDENFSECVST 350

Query: 62  VETACFMAEVNTLGFHEVYSDLSHPHGHGIVGITIATNKPCFPVDII----VEHPLA 114
           +++AC + +  +  F E  S+     G GIVG      K  F  ++       +PLA
Sbjct: 351 IDSACSVPDEQSKSFWEACSEHHLLQGEGIVGKAFEATKLFFVPEVATFSKTNYPLA 407

The following BLAST results are available for this feature:

BLAST of Lcy08g004040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFW8	2.8e-17	43.75	Protein NLP5 OS=Arabidopsis thaliana OX=3702 GN=NLP5 PE=2 SV=1	[more]
Q10S83	4.7e-17	43.75	Protein NLP1 OS=Oryza sativa subsp. japonica OX=39947 GN=NLP1 PE=2 SV=1	[more]
Q9LE38	1.4e-16	42.71	Protein NLP4 OS=Arabidopsis thaliana OX=3702 GN=NLP4 PE=2 SV=1	[more]
Q7X9B9	5.4e-13	39.17	Protein NLP2 OS=Arabidopsis thaliana OX=3702 GN=NLP2 PE=2 SV=3	[more]
Q8H111	2.7e-12	34.78	Protein NLP1 OS=Arabidopsis thaliana OX=3702 GN=NLP1 PE=2 SV=1	[more]

BLAST of Lcy08g004040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
T1SBU4	2.4e-40	37.54	Nodule inception protein 1 OS=Datisca glomerata OX=34297 GN=NIN1 PE=2 SV=1	[more]
A0A6A1WFW4	2.0e-39	37.85	Protein NLP2 OS=Morella rubra OX=262757 GN=CJ030_MR2G002409 PE=4 SV=1	[more]
A0A6P5SD72	4.6e-39	37.34	LOW QUALITY PROTEIN: protein NLP2-like OS=Prunus avium OX=42229 GN=LOC110754710 ...	[more]
A0A2P5CYX9	1.1e-37	35.80	NIN transcription factor OS=Parasponia andersonii OX=3476 GN=PanNIN PE=4 SV=1	[more]
A0A2P5CYY1	1.1e-37	35.80	NIN transcription factor OS=Parasponia andersonii OX=3476 GN=PanNIN PE=4 SV=1	[more]

BLAST of Lcy08g004040 vs. NCBI nr


Match Name	E-value	Identity	Description
AGR88904.1	5.0e-40	37.54	nodule inception protein 1 [Datisca glomerata]	[more]
KAB1223276.1	4.2e-39	37.85	Protein NLP2 [Morella rubra]	[more]
XP_021811506.1	9.4e-39	37.34	LOW QUALITY PROTEIN: protein NLP2-like [Prunus avium]	[more]
PON66248.1	2.3e-37	35.80	NIN transcription factor [Parasponia andersonii]	[more]
PON66249.1	2.3e-37	35.80	NIN transcription factor [Parasponia andersonii]	[more]

BLAST of Lcy08g004040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76350.1	2.0e-18	43.75	Plant regulator RWP-RK family protein	[more]
AT1G20640.1	9.8e-18	42.71	Plant regulator RWP-RK family protein	[more]
AT1G20640.2	9.8e-18	42.71	Plant regulator RWP-RK family protein	[more]
AT4G35270.1	3.8e-14	39.17	Plant regulator RWP-RK family protein	[more]
AT2G17150.2	1.5e-13	35.04	Plant regulator RWP-RK family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..239
None	No IPR available	PANTHER	PTHR32002:SF46	PROTEIN NLP2	coord: 11..107
IPR045012	Protein NLP	PANTHER	PTHR32002	PROTEIN NLP8	coord: 11..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g004040.1	Lcy08g004040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity