Lcy08g003920 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g003920
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat (PPR) superfamily protein
Location	Chr08: 5174373 .. 5180694 (+)
RNA-Seq Expression	Lcy08g003920
Synteny	Lcy08g003920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCATCCATCCTTTTCTCTTTGACTTCCTCTCTCCCTTTCTCGTGTAGCCCCAAGTATTCAAGTTAACGCCGGCAACGACGATCGGCGGCCTCTGAAGCGCCACCCACGCGCGGGTCGAGCTCCTTTCTGCAGCGGCGGAGCTCTACCCACGACACACGACTCCCAGCGGCGGAACATTCTTGTGGCGGCGACGCACCCACGAGAACGGAGAACCGGCCTGTGCAGCAGAACCCACGGCGGCGCGAGCTCATCTATTGAGGTCGCGTAATTCCTCTACTGTCTTATCAGTAACGGCAGTGTTGTGACAATCTCTCTGCCACGACCGACGCGACAGCTTGACGGCGGCTAGCAAACCAGGTTGCTCCCGGCGACAGTGGCGAACCATAACGCGAGACCCAGCAACCCAGCACTCCGGCGCTGCTACCAGAGGACAAGCAAACTCCGAAGAGCGCCGGCGTTCGAACCAGACTCGACCGTGCGGCGGTGGGCAGCGCGACGAACGGTAGCAACCGCGAACAGATCCGGTGGCGGCGCATTTTTGGTAGCTTAACGACTTTCGGCGGTGACCCACGCTTCAACGACCCCAGTGCTGCAAAGCCTACTTTGTTTCGTGTCAGATATATGAACCCACGCCCTTTTCGACCTCAGATCTACAATCCCACGCTCTTTGGCAACTAGACTTGCAATATCGAACACTCTCGGCATCACATTTGGCAAGGATCTAGAACGCTTTTTCGGTAAGAGTCGGACGATAATCAGCTGGCTTGAACCCTCTTTCAGTTTCAACTAATTGTTCTGAACAGAGTTTTAACCTCGAAACTTAATGTTTGTTGGTTCAGGAACCGATCGATTAGCTTAGGAGCGTTAGGAAGTGTTGTAAGTTGTTCTTACTTGTGTTGTGTGCTGTTTGTTTTGTTTGAATTGTATGCTTATGTCGTTTTTACTATATTGAGTATTTACTGATGCAAATTGATGTTGTTCTGAAGTAAATTGGTGCGAGTTGAGATTATCTGTTATGTGTTATAACTTATAGCATACTGATTAGGTTGGAGAATGCATGTTGAATATTGACGATGATTGAAAAGCATGTTCAAGTATAGTTGTATGTATTTATGATTATGTGAGCCCGCCGGCATGAAGTGTGCTATGAGAATTGTTTTTGTTTGAGAGCATGTGATAGAAAGCATGTTAGGTAGGTTGTGAATGATCTGTGAAAAAGGGTTAGTACACCTTGAGTTAAGGATAAAGGAAAGTAAGGTGAATATTAGGGCTTCAATATAAATGTTGGAGGTCAATATGCCAATCTTGGATGAGACGGGTATCGAGACCTTAAGTATAAATAGTTATAGATTTGTGTGATGAGTCTGTATAGAGGCAAATATTGGGACGTTGGGTATAAATGGTCAATAGCCAATTTGTTGTTAAGTCATTGGAGCCTTGGGCATAAATGGTGAAGGGTCAGTGCAACAGGTCGAGACCTTAGGTATAAATGGTCAAAGATTGAATGTCAAGTTATATAGAGAAGTGTCAAGGCTTCGAGTATAAATGGTCAGAGGTTAATATATCTCGAAAGAGTAAAACTTGAAGAGTTTGAAAGGCTAGCATAGTAGTTTTTGCCTTGGGTATTAAGGTAAGGGGCCAAACGTCAAGGTTCTGTAGAGAAGTGTCGAAGTTCTGGGTATATATGATTAGTGTTTAATACATTTGGAAAGAGTAAAGCTCAAAGAGTTTAAAAGAGCTGGAAAGAAGGAGAAAGAGCTAGAAAGATTTGGGAAAAGCTTGAGAGAGCTCGAAAGATTTAGAGTTAGAAGATGGGTACTTATGACATGAGTCCTATGCTTGATATGAATGTGATGTTTAAATGGGGAAATATCCTAGGTATTATTTTGTTATATGCATGTTGTGAATGAGCATGATATTGTGATGTTTGTTATGTTATAGTTATACTATTTCGTGTGGCTCCTTAGGTGGGATTTACTCATTGAGTATTGATGTACTCACCCCCAAAAGTTCTTGCAGGTAGTGTTGTGACTACAAGCTTAGTTGTGTCCCTTTAGTTGTCCCTTTTGTCATTTGCTTAGAATTTTGGAGGCTTGACTAGGAGAGAACTTTTAGTTGTCTCTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTAGTTTACTTTCCTTGTTCAGGTTGGTTCTTGGTCAAAAGAGATATCTATTATTTGATTTCTTTTGCAAACGTTTATGGTTGTTTTTTGCTTCTTGGTTTAGTTGTTTTAGTTTAATTGCTTCGTTGAGTTGAGACCTTGATGTTCTAACGGAGAATTTTAGTTTGGTTTCTTTTCTAGAGTAAATGGTAGAACGTGTTGCTTCACTTGATTTAAGTTAAATGGAAAATTTTAGTAATATTTTCTTATTTAGTTAGAAACTTGGAGGTGTTAGAAGAGTACTCTGAAATTCCAATCTATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGACGAGCTTCAAGTTCGCTTGATTTCGCAGTTCAAGAATGCTTCCTCCATCATTGGGAGGTTGCAGGTTGGTCTTAATTCTCATTTAATTGCACGGACAAATATTTGTTTTCAGCTTCAAGATTAGAATCTTTGTAAAATTATTGTCAGGTGCTTCAAGATCCTAAGAATTATGGCAGTCTCTCTGGCATGGATGGCATTATAGATGCGCTATTGGCAAAGCAGATGGAATCCTTGCAACTCATTTTCTCATCTATTAAAAAAACAATGTAAGTTTGCTTTTGTTTCGGTTTCTTTTCTTGCTTCTGCGTGTGATGCAATTCTTAGGATATGCTAGAAGAAAGAATTAGAAACAAAAATAAAAGATCATGAAATTAGTCCAAACGGTGTGTTAAATTTTTTCTGCTATCTTGTTTTCATCAATGAAGAATCTGAATAAAGATCTCAGGGAAGAACTTGGGAATATTGTCCATTCCATGGAGAAGATTAGTCGTGATGGGAAGCAATTAGTCAAAGGTGGTTCTAATCCGCCATCAATGAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGTCTTGAAGATTGCTTGAACGGGTTAATGCTTCTATGCGACATGCACCGCTCTGAGTAAGAATTTTTCTGATTTCGTATTATGTCATGAAAGCAAGTTTGTGTATGCAGTGAAAATTACAAATGAAAAACTGATCAGTTTCTTTTGGCAACTTGGAGTGTGCTGTTTTGTGAGATCATGGGGTGGGAGGAATTTTTTTTTCTTCTTGTTCTTGTTCTTTTTTTTTTTTTTTTTAATATGAAAAAAAACATCAAGAATATATATTTCAACAAAAGGGCATATACAACCTAGGGGCCAGGGTGGAGATCACCCATGCTCGGAAACTACTTCAAAAGAGTTTTTACAATTTTTTTTCTTGTGTAAAGTAATCCACCACGAGGCCATACTTTGTACACAATAACAAAAGAAATCAAAACTATAGGACTTATCTTTGAAGGTTTTGACATTTCTTTAGAGAGCTTGAGAAGACTTCGACTAATGTGCGGTCCCTCATAAGGTTTCATGTTTCTCTCTTTAGGCCTCGGTGATGAAAGCTTTCTGTAACTATCCTTTAGGTCTCATTTTATTTGATTGAAACCCCTTTTTATAGTTTGACTATTTTTTTGAGGGGATTTGTTTTTTTATGCCTTGTATTCTTTCATTTTTTTTCTCTATGAAAGTTTGGTTATTCATATAAAAAAATGATCACAATTATGTTGACTTCTTTATTTATTGTTTCCTTTTCTAAAAAATACATGGTGTCTTTACTGAATTCTTAATTATATATTCTGATTGGAGCTTATGTTATGATACCTACATTTATGCTGTACTATACACGTCCACAGACTGAATTATTTTATCAACTTGTAATTTGTATGTTTCATTGTTTTTCCAATAGTAACTTAATCTCTTTTGCCAATCTTTTGAGTGGACGTGTAGCTTGGATTCTTAATGAACTTGTTTCAATTTCTTTAGGTACCATCTTAAAGAATCTATTGTCTCAGCACTTCCAGAACTTTTCTGGAAAGCCAGGTAATTTTTTATCAGTTGAGGAATTTACTATCTTAATTTGCTTTGGTGGGATGAAACTTCTGGTTCTAATTAGAGGATCCATGAAATTGGTGATGTTAAAAAAAGAAAACAATTGATTTTGGATCTTCAATTTTCTTCTCATAGTTGCATGTGAAATATTCTTTTCTTGTAATATGCCATATGAATTTATACCTTATAGGATTCTGTCCTTTTGTCATCTTAATTTTTTTTTCCATCCAAATTATGTGATTACCATGGTCCATTTTCTTTTTCCACTGAAAATATGTGCATCTTGAATTGTTAGGAATCATAGTGCCCAAGATCTCAGTTCCTTGCATCAACTTCTGGTTGATCAGCCCAACATTCGAAAAGAGGAAGGTTAGTAGATGGCTACTTATTTTCAGCTCATCGTAAAATGAACTTTAGTGACGAATGTGTTATTCGTAAGTTTAGAAATATCAAATTTGTGAATAAAAAAAAACGTTTAATGTGTATATTTTCCGATAAGAATTGAGTTTTCATTGTGAAAAATAAACGACTATACAAGGGCATACAAAAAACAAGTCCACAAAAAAGCAGTCCAAACACTAACTATAGAAACAGATTCCAATCCAGAGGATCAAACCGAGCTCATAATTATAAAAAAGTTGGACAAAAGGCACCCATAAGGACACATTAAACCTAGATCCATCTCAAACCTTCTCCCGCAATCTCTCAACCTCCCTAAAAATTTTGTTGTTCCTCGAAAGCCAAATTTTCCACAACATGGCAAGGAAACAAACCTGCCACAGTACTTTGCTTTTATCCCATAATCTGTCTGTTTGGAAGTAAGGTGGGTTTTAGTAAATGTTTCTCTCTCCTGGAAAATGTTCAACCTTGAATGTCCATTCTATTCTTCATGGTGTAAAGTTTGCTTTTACTTTCACTATCTAATGCCTTTCATTGTTATGGACCATTTCTTGGTTTTATCCAATTTATAGTGAAGCACTATCTTGAAGTAGTTGCCTGGTCCTGGCTTTCAAGTGTTCAACATTATAGAAGCAAATATTGCCTTTCCTTTTTCTGTAATGGCTTTTACTGGATTCTTCTTATTATGCTGCCTTAAAATTTGCTTCATTCTTTCTTCAATTTAAATGACTGCACTTTCCCCTCAATTCATGACATGTAATATTAAGCATAATGCCTAAAAAGTTCGCTTAGTTTGGCCATCAAGTGGTCATCTGTTGTCAAAGGGTTAAAATTTTGTTGGCTTTGAATCCATTTGGTGTTTGGATTAAGTTATGATCCAGAGATGCAGAATCAAGACAAAGACAAAAGACTCTAAAAGGTAGAGTACTTGGATGTGTGATTTTTAACAGGAAGCCAAGAGCTTATGGGCTGCCCTTCACACAACAAGAGTTTATGTGATTATTAAAAAAAGACTCTAGAAGGTTGAGTACTTCGATTTTTAGAGGGTTGAGAGATCTTTGGAGGAGGTTAGAGAGGTTGTGAGGTTTAACGTTTCTTTATGGGCATCCGTTAATTGGACTTTTTTAGTTACTTTTTGAATTGGAGTCTGTTCCTGTAGGTAGTATGGGGATTCCTTTCATGGGTTTGTTTTTGTATGTCCTTGTACATTCTTTCATTTTTATCAATGAAGGCTCGGTTTCTTATATATGTATATATGTTGTCGTATTTTCACATTGCAAAATGACTTGATTCTTGATCCTCTTTTGCAGTTGAATTCATCTTTGACACCATACTGGTCCCGGAAGCCTAGCTAATATGAGATAATCAAACCCTTCGAGAACATTTGATCGCATCGACATGCTTTCTTCCAAGTTTTGACTAGTGGAAGATCAAACCAAGAAACTATCATGAAGATAAAGCTTCAGGGATATTTACCTCATGAGTATACAGCACCAACAATATCAGTTGAAAAGCAAATTAGTGTCAGTATTTATAAGCATTTCCCCCTCCCACTCCACAGTTTATTTCTTTTTTGTTTTAGAGGAAGGAGATGGAAGTAAAAGAAAAGGCAAAAAGAAGGACGTTCTTGCCTTTTAGGCATCTGGAGAGTATAGAAATATAAATGTGAAACTCTTTTATATGCCTATTTTTTTTAGTTCAACGAAATCTAGGGATTTGCCTTTTCGGTCGAAGATATATACCTTAGTTAAATTGCCAGGTTTAAATTCTATTTTCATCATGAACTTCTGACCTTTTTGGTTTATCATTTGTATTT

mRNA sequence

ATCATCCATCCTTTTCTCTTTGACTTCCTCTCTCCCTTTCTCGTGTAGCCCCAAGTATTCAAGTTAACGCCGGCAACGACGATCGGCGGCCTCTGAAGCGCCACCCACGCGCGGGTCGAGCTCCTTTCTGCAGCGGCGGAGCTCTACCCACGACACACGACTCCCAGCGGCGGAACATTCTTGTGGCGGCGACGCACCCACGAGAACGGAGAACCGGCCTGTGCAGCAGAACCCACGGCGGCGCGAGCTCATCTATTGAGGTCGCGTAATTCCTCTACTGTCTTATCAGTAACGGCAGTGTTGTGACAATCTCTCTGCCACGACCGACGCGACAGCTTGACGGCGGCTAGCAAACCAGGTTGCTCCCGGCGACAGTGGCGAACCATAACGCGAGACCCAGCAACCCAGCACTCCGGCGCTGCTACCAGAGGACAAGCAAACTCCGAAGAGCGCCGGCGTTCGAACCAGACTCGACCGTGCGGCGGTGGGCAGCGCGACGAACGGTAGCAACCGCGAACAGATCCGGTGGCGGCGCATTTTTGGTAGCTTAACGACTTTCGGCGGTGACCCACGCTTCAACGACCCCAGTGCTGCAAAGCCTACTTTGTTTCGTGTCAGATATATGAACCCACGCCCTTTTCGACCTCAGATCTACAATCCCACGCTCTTTGGCAACTAGACTTGCAATATCGAACACTCTCGGCATCACATTTGGCAAGGATCTAGAACGCTTTTTCGGAACCGATCGATTAGCTTAGGAGCGTTAGGAAGTGTTAAACTTGGAGGTGTTAGAAGAGTACTCTGAAATTCCAATCTATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGACGAGCTTCAAGTTCGCTTGATTTCGCAGTTCAAGAATGCTTCCTCCATCATTGGGAGGTTGCAGGTGCTTCAAGATCCTAAGAATTATGGCAGTCTCTCTGGCATGGATGGCATTATAGATGCGCTATTGGCAAAGCAGATGGAATCCTTGCAACTCATTTTCTCATCTATTAAAAAAACAATGGAAGAACTTGGGAATATTGTCCATTCCATGGAGAAGATTAGTCGTGATGGGAAGCAATTAGTCAAAGGTGGTTCTAATCCGCCATCAATGAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGTCTTGAAGATTGCTTGAACGGGTTAATGCTTCTATGCGACATGCACCGCTCTGAGTACCATCTTAAAGAATCTATTGTCTCAGCACTTCCAGAACTTTTCTGGAAAGCCAGGAATCATAGTGCCCAAGATCTCAGTTCCTTGCATCAACTTCTGGTTGATCAGCCCAACATTCGAAAAGAGGAAGTTGAATTCATCTTTGACACCATACTGGTCCCGGAAGCCTAGCTAATATGAGATAATCAAACCCTTCGAGAACATTTGATCGCATCGACATGCTTTCTTCCAAGTTTTGACTAGTGGAAGATCAAACCAAGAAACTATCATGAAGATAAAGCTTCAGGGATATTTACCTCATGAGTATACAGCACCAACAATATCAGTTGAAAAGCAAATTAGTGTCAGTATTTATAAGCATTTCCCCCTCCCACTCCACAGTTTATTTCTTTTTTGTTTTAGAGGAAGGAGATGGAAGTAAAAGAAAAGGCAAAAAGAAGGACGTTCTTGCCTTTTAGGCATCTGGAGAGTATAGAAATATAAATGTGAAACTCTTTTATATGCCTATTTTTTTTAGTTCAACGAAATCTAGGGATTTGCCTTTTCGGTCGAAGATATATACCTTAGTTAAATTGCCAGGTTTAAATTCTATTTTCATCATGAACTTCTGACCTTTTTGGTTTATCATTTGTATTT

Coding sequence (CDS)

ATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGACGAGCTTCAAGTTCGCTTGATTTCGCAGTTCAAGAATGCTTCCTCCATCATTGGGAGGTTGCAGGTGCTTCAAGATCCTAAGAATTATGGCAGTCTCTCTGGCATGGATGGCATTATAGATGCGCTATTGGCAAAGCAGATGGAATCCTTGCAACTCATTTTCTCATCTATTAAAAAAACAATGGAAGAACTTGGGAATATTGTCCATTCCATGGAGAAGATTAGTCGTGATGGGAAGCAATTAGTCAAAGGTGGTTCTAATCCGCCATCAATGAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGTCTTGAAGATTGCTTGAACGGGTTAATGCTTCTATGCGACATGCACCGCTCTGAGTACCATCTTAAAGAATCTATTGTCTCAGCACTTCCAGAACTTTTCTGGAAAGCCAGGAATCATAGTGCCCAAGATCTCAGTTCCTTGCATCAACTTCTGGTTGATCAGCCCAACATTCGAAAAGAGGAAGTTGAATTCATCTTTGACACCATACTGGTCCCGGAAGCCTAG

Protein sequence

MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRDGKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEVEFIFDTILVPEA

Homology

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BLAST of Lcy08g003920 vs. ExPASy Swiss-Prot
Match: Q6NPG7 (Uncharacterized protein At5g43822 OS=Arabidopsis thaliana OX=3702 GN=At5g43822 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.5e-44
Identity = 98/199 (49.25%), Postives = 139/199 (69.85%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDG 60
           MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  +YG+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRDGKQLVKGGSNPPSMKQLQQR 120
           I DA++ +QM  L+ +  S+K  MEE    V + EK+ RDG QL +  S   S +++++R
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIES---SKRRVEER 120

Query: 121 VGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQ 180
           +G+KP + DCL GL +L DMH+SEYHLK SI+S L  L  K    S  DL++L  L+VDQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKP---SPGDLNALQYLVVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPE 200
           PNI K+EV+ IFD I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

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BLAST of Lcy08g003920 vs. ExPASy TrEMBL
Match: A0A6J1EJ12 (uncharacterized protein At5g43822 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111435044 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.0e-97
Identity = 186/200 (93.00%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQVLQDP NYGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFTNASSIIGRLQVLQDPNNYGSLSGMDG 60

Query: 61  IIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRDGKQLVKGGSNPPSMKQLQQR 120
           I+DALLAKQMESLQL+FSSI KTMEELGNIV SMEKI RDGKQL+KGGSN PS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMEELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGL LLCDMHRSEYHLKES+VSALPELFWK RNHSAQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYHLKESMVSALPELFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNIRKEEVEFIFDTILVPEA
Sbjct: 181 PNIRKEEVEFIFDTILVPEA 200

[Close]

BLAST of Lcy08g003920 vs. ExPASy TrEMBL
Match: A0A0A0K4X9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025190 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.8e-96
Identity = 183/200 (91.50%), Postives = 194/200 (97.00%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRDGKQLVKGGSNPPSMKQLQQR 120
           I++ALLAKQMESLQL FSSIKKTMEELGNIV+SMEKI RDGKQLVKGGSN PS+KQLQQ+
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLMLLC MHRSEY+LKESIVSALPELFWKARNH AQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNI+KEEVEF+FDTILV EA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 200

[Close]

BLAST of Lcy08g003920 vs. ExPASy TrEMBL
Match: A0A1S3BIA7 (uncharacterized protein At5g43822 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490205 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.9e-95
Identity = 180/200 (90.00%), Postives = 193/200 (96.50%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRDGKQLVKGGSNPPSMKQLQQR 120
           I++ALL KQMESLQL FSSIKKTMEELGN+V+SMEKI RDGKQLVKGGSN PS+KQLQQR
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRSEY LKESIVSALPELFWKARNH AQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNI+KEEV+F+FDTILV EA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 200

[Close]

BLAST of Lcy08g003920 vs. ExPASy TrEMBL
Match: A0A6J1JMF9 (uncharacterized protein At5g43822 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486514 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.9e-94
Identity = 181/200 (90.50%), Postives = 188/200 (94.00%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMD WDELQVRLISQF NASSIIGRLQVLQDP NYGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDHWDELQVRLISQFTNASSIIGRLQVLQDPNNYGSLSGMDG 60

Query: 61  IIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRDGKQLVKGGSNPPSMKQLQQR 120
           I+DALLAKQMESLQL+FSSI KTMEELGNIV SMEKI RDGKQL+KGGSN PS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMEELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGL LLCDMHRSEY+LKES+VSALP+LFWK RNHSAQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYYLKESMVSALPQLFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNIRKEEVEF+FD ILVPEA
Sbjct: 181 PNIRKEEVEFMFDIILVPEA 200

[Close]

BLAST of Lcy08g003920 vs. ExPASy TrEMBL
Match: A0A1S4DWT4 (uncharacterized protein At5g43822 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490205 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.7e-92
Identity = 178/200 (89.00%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRDGKQLVKGGSNPPSMKQLQQR 120
           I++ALL KQMESLQL FSSIKKTMEELGN+V+SMEKI RDGKQLVKGGSN PS+KQLQQR
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRS+  LKESIVSALPELFWKARNH AQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSD--LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNI+KEEV+F+FDTILV EA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 198

[Close]

BLAST of Lcy08g003920 vs. NCBI nr
Match: XP_022928127.1 (uncharacterized protein At5g43822 isoform X3 [Cucurbita moschata])

HSP 1 Score: 364.0 bits (933), Expect = 8.3e-97
Identity = 186/200 (93.00%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQVLQDP NYGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFTNASSIIGRLQVLQDPNNYGSLSGMDG 60

Query: 61  IIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRDGKQLVKGGSNPPSMKQLQQR 120
           I+DALLAKQMESLQL+FSSI KTMEELGNIV SMEKI RDGKQL+KGGSN PS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMEELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGL LLCDMHRSEYHLKES+VSALPELFWK RNHSAQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYHLKESMVSALPELFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNIRKEEVEFIFDTILVPEA
Sbjct: 181 PNIRKEEVEFIFDTILVPEA 200

[Close]

BLAST of Lcy08g003920 vs. NCBI nr
Match: XP_004144893.1 (uncharacterized protein At5g43822 isoform X2 [Cucumis sativus] >KGN43347.1 hypothetical protein Csa_020516 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 183/200 (91.50%), Postives = 194/200 (97.00%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRDGKQLVKGGSNPPSMKQLQQR 120
           I++ALLAKQMESLQL FSSIKKTMEELGNIV+SMEKI RDGKQLVKGGSN PS+KQLQQ+
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLMLLC MHRSEY+LKESIVSALPELFWKARNH AQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNI+KEEVEF+FDTILV EA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 200

[Close]

BLAST of Lcy08g003920 vs. NCBI nr
Match: XP_008447827.1 (PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo])

HSP 1 Score: 357.1 bits (915), Expect = 1.0e-94
Identity = 180/200 (90.00%), Postives = 193/200 (96.50%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRDGKQLVKGGSNPPSMKQLQQR 120
           I++ALL KQMESLQL FSSIKKTMEELGN+V+SMEKI RDGKQLVKGGSN PS+KQLQQR
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRSEY LKESIVSALPELFWKARNH AQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNI+KEEV+F+FDTILV EA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 200

[Close]

BLAST of Lcy08g003920 vs. NCBI nr
Match: XP_022989465.1 (uncharacterized protein At5g43822 isoform X2 [Cucurbita maxima])

HSP 1 Score: 355.1 bits (910), Expect = 3.8e-94
Identity = 181/200 (90.50%), Postives = 188/200 (94.00%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMD WDELQVRLISQF NASSIIGRLQVLQDP NYGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDHWDELQVRLISQFTNASSIIGRLQVLQDPNNYGSLSGMDG 60

Query: 61  IIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRDGKQLVKGGSNPPSMKQLQQR 120
           I+DALLAKQMESLQL+FSSI KTMEELGNIV SMEKI RDGKQL+KGGSN PS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMEELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGL LLCDMHRSEY+LKES+VSALP+LFWK RNHSAQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYYLKESMVSALPQLFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNIRKEEVEF+FD ILVPEA
Sbjct: 181 PNIRKEEVEFMFDIILVPEA 200

[Close]

BLAST of Lcy08g003920 vs. NCBI nr
Match: XP_023529794.1 (uncharacterized protein At5g43822 [Cucurbita pepo subsp. pepo] >XP_023529795.1 uncharacterized protein At5g43822 [Cucurbita pepo subsp. pepo] >XP_023529796.1 uncharacterized protein At5g43822 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 182/200 (91.00%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQVLQDPKNYGSLS   G
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFTNASSIIGRLQVLQDPKNYGSLS---G 60

Query: 61  IIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRDGKQLVKGGSNPPSMKQLQQR 120
           I+DALLAKQMESLQL+FSSI KTM ELGNIV SMEKI RDGKQL+KGGSN PS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMVELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGL LLCDMHRSEYHLKES+VS+LPELFWK RNHSAQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYHLKESMVSSLPELFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPEA 201
           PNIRKEEVEFIFDTILVPEA
Sbjct: 181 PNIRKEEVEFIFDTILVPEA 197

[Close]

BLAST of Lcy08g003920 vs. TAIR 10
Match: AT5G43822.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 178.7 bits (452), Expect = 4.6e-45
Identity = 98/199 (49.25%), Postives = 139/199 (69.85%), Query Frame = 0


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDG 60
           MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  +YG+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRDGKQLVKGGSNPPSMKQLQQR 120
           I DA++ +QM  L+ +  S+K  MEE    V + EK+ RDG QL +  S   S +++++R
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIES---SKRRVEER 120

Query: 121 VGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQ 180
           +G+KP + DCL GL +L DMH+SEYHLK SI+S L  L  K    S  DL++L  L+VDQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKP---SPGDLNALQYLVVDQ 180

Query: 181 PNIRKEEVEFIFDTILVPE 200
           PNI K+EV+ IFD I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

The following BLAST results are available for this feature:

BLAST of Lcy08g003920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPG7	6.5e-44	49.25	Uncharacterized protein At5g43822 OS=Arabidopsis thaliana OX=3702 GN=At5g43822 P...	[more]

BLAST of Lcy08g003920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJ12	4.0e-97	93.00	uncharacterized protein At5g43822 isoform X3 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A0A0K4X9	5.8e-96	91.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025190 PE=4 SV=1	[more]
A0A1S3BIA7	4.9e-95	90.00	uncharacterized protein At5g43822 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1JMF9	1.9e-94	90.50	uncharacterized protein At5g43822 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A1S4DWT4	1.7e-92	89.00	uncharacterized protein At5g43822 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]

BLAST of Lcy08g003920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928127.1	8.3e-97	93.00	uncharacterized protein At5g43822 isoform X3 [Cucurbita moschata]	[more]
XP_004144893.1	1.2e-95	91.50	uncharacterized protein At5g43822 isoform X2 [Cucumis sativus] >KGN43347.1 hypot...	[more]
XP_008447827.1	1.0e-94	90.00	PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo]	[more]
XP_022989465.1	3.8e-94	90.50	uncharacterized protein At5g43822 isoform X2 [Cucurbita maxima]	[more]
XP_023529794.1	1.2e-92	91.00	uncharacterized protein At5g43822 [Cucurbita pepo subsp. pepo] >XP_023529795.1 u...	[more]

BLAST of Lcy08g003920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43822.1	4.6e-45	49.25	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 5..25
None	No IPR available	PANTHER	PTHR37904:SF2	OS10G0566900 PROTEIN	coord: 1..199
IPR029159	Casein Kinase 2 substrate	PFAM	PF15011	CK2S	coord: 7..160 e-value: 7.1E-45 score: 152.8
IPR038985	At5g43822-like	PANTHER	PTHR37904	OS10G0566900 PROTEIN	coord: 1..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g003920.1	Lcy08g003920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005635	nuclear envelope