Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTCATCACCTATTCTTATCGTTTTGATCTTGCTTGTTTTTTCTACAGCAGCCAATATTATTGATCCGGAGACGAAGGTGGCGAATGATTTTGTTCGAGAAACATGCAACAAAACTGAAAGGAAAGAGCTTTGCATCTCTGTCGTGGATTCAGATCTTCATGAAGATTTGAAATCCAACTTGACAGGTTTTCTCACCATATTCACCAACCAATCTTTCTATGTTGTGGTTAATACTCACACCTACATTTACAATCAATTAAAAGATGGACAATTGACGAATCGAATGAAACAAGTCCTTATAGGATGTTTGGAGCAATATCGAATGAGTGAAGAAACTTTGGGGTATTTATTTGAGGAAAAACTATTGAAGCAACACATTCTAGATTTGACCCCATATTTGTCATTGGTTGCTGGTTGGTTAAACGTTTGTGAAGATGATTTTGAGGGATTTACACAAGAACCATCGACTTTGAAGTCTCTCTATGATCATGCTTTGTCACTCCTAATGCTTTCATTGGATATGTCAAATCTCATCAAATGTGGTCGTGTTGACCAACCTCTTTGCTAG
mRNA sequence
ATGAATTCATCACCTATTCTTATCGTTTTGATCTTGCTTGTTTTTTCTACAGCAGCCAATATTATTGATCCGGAGACGAAGGTGGCGAATGATTTTGTTCGAGAAACATGCAACAAAACTGAAAGGAAAGAGCTTTGCATCTCTGTCGTGGATTCAGATCTTCATGAAGATTTGAAATCCAACTTGACAGGTTTTCTCACCATATTCACCAACCAATCTTTCTATGTTGTGGTTAATACTCACACCTACATTTACAATCAATTAAAAGATGGACAATTGACGAATCGAATGAAACAAGTCCTTATAGGATGTTTGGAGCAATATCGAATGAGTGAAGAAACTTTGGGGTATTTATTTGAGGAAAAACTATTGAAGCAACACATTCTAGATTTGACCCCATATTTGTCATTGGTTGCTGGTTGGTTAAACGTTTGTGAAGATGATTTTGAGGGATTTACACAAGAACCATCGACTTTGAAGTCTCTCTATGATCATGCTTTGTCACTCCTAATGCTTTCATTGGATATGTCAAATCTCATCAAATGTGGTCGTGTTGACCAACCTCTTTGCTAG
Coding sequence (CDS)
ATGAATTCATCACCTATTCTTATCGTTTTGATCTTGCTTGTTTTTTCTACAGCAGCCAATATTATTGATCCGGAGACGAAGGTGGCGAATGATTTTGTTCGAGAAACATGCAACAAAACTGAAAGGAAAGAGCTTTGCATCTCTGTCGTGGATTCAGATCTTCATGAAGATTTGAAATCCAACTTGACAGGTTTTCTCACCATATTCACCAACCAATCTTTCTATGTTGTGGTTAATACTCACACCTACATTTACAATCAATTAAAAGATGGACAATTGACGAATCGAATGAAACAAGTCCTTATAGGATGTTTGGAGCAATATCGAATGAGTGAAGAAACTTTGGGGTATTTATTTGAGGAAAAACTATTGAAGCAACACATTCTAGATTTGACCCCATATTTGTCATTGGTTGCTGGTTGGTTAAACGTTTGTGAAGATGATTTTGAGGGATTTACACAAGAACCATCGACTTTGAAGTCTCTCTATGATCATGCTTTGTCACTCCTAATGCTTTCATTGGATATGTCAAATCTCATCAAATGTGGTCGTGTTGACCAACCTCTTTGCTAG
Protein sequence
MNSSPILIVLILLVFSTAANIIDPETKVANDFVRETCNKTERKELCISVVDSDLHEDLKSNLTGFLTIFTNQSFYVVVNTHTYIYNQLKDGQLTNRMKQVLIGCLEQYRMSEETLGYLFEEKLLKQHILDLTPYLSLVAGWLNVCEDDFEGFTQEPSTLKSLYDHALSLLMLSLDMSNLIKCGRVDQPLC
Homology
BLAST of Lcy08g003290 vs. ExPASy TrEMBL
Match:
A0A6J1C7W5 (uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008804 PE=4 SV=1)
HSP 1 Score: 100.9 bits (250), Expect = 6.0e-18
Identity = 66/160 (41.25%), Postives = 85/160 (53.12%), Query Frame = 0
Query: 28 VANDFVRETCNKTERK--ELCISVVDSDLHEDLKSNLTGFLTIFTNQSFYVVVNTHTYIY 87
VAN FV TCNK E + ++CI V+DSD H+DLK NL+G L IF N S + H Y+
Sbjct: 9 VANSFVNNTCNKFEEEFIKVCIDVIDSDPHQDLKLNLSGLLAIFINHSIDNATDNHLYLM 68
Query: 88 NQLKDGQLTNRMKQVLIGCLEQYRMSEETLGYLFEEKLLKQHILDLTPYLSLVAGWLNVC 147
QLK L ++ C+EQY + L E LLK DL LS + C
Sbjct: 69 EQLKRSDLDKDIRYTFNVCVEQYERGLDILKSSL-EALLKNDKDDLGLILSDAFDKIVAC 128
Query: 148 EDDFEGFTQEPSTLKSLYDHALSLLMLSLDMSNLIKCGRV 186
EDDFE T EP + + Y LL LS+ +NLI+C +V
Sbjct: 129 EDDFES-TPEPPSWLAHYLPLRKLLALSMGTANLIQCKKV 166
BLAST of Lcy08g003290 vs. ExPASy TrEMBL
Match:
A0A5D3BJB5 (Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004170 PE=4 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 1.4e-14
Identity = 62/180 (34.44%), Postives = 91/180 (50.56%), Query Frame = 0
Query: 6 ILIVLILLVFSTAANIIDPETKVANDFVRETCNKT-ERKELCISVVDSDLHEDLKSNLTG 65
+L+ ++ L T A+ + NDFVR TCN+T E K LC+S + S+ DLKSNLTG
Sbjct: 9 VLLCILSLCMLTKAD----QNTTINDFVRHTCNRTHELKNLCLSQISSEPRNDLKSNLTG 68
Query: 66 FLTIFTNQSFYVVVNTHTYIYNQLKDGQLTNRMKQVLIGCLEQYRMSEETLGYLFEEKLL 125
L IF NQS N +++ ++ +++ K +L CL+ +++ L E
Sbjct: 69 LLMIFVNQSISNFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQT 128
Query: 126 KQHILDLTPYLSLVAGWLNVCEDDFEGFTQEPSTLKSLYDHALSLLMLSLDMSNLIKCGR 185
K + V C DDFEG T P +S Y+ + +LL LS+ M NLI C R
Sbjct: 129 KTGYDAEQLPVGNVGNLAVECFDDFEG-TPVPPEWQSRYNASFALLKLSMAMINLITCNR 183
BLAST of Lcy08g003290 vs. ExPASy TrEMBL
Match:
A0A1R3IZD3 (TPR_REGION domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_08658 PE=4 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 3.4e-05
Identity = 48/189 (25.40%), Postives = 86/189 (45.50%), Query Frame = 0
Query: 2 NSSPILIVLILLVFSTAANIIDPETKVAN-DFVRETCNKTERKELCISVVDSDLHEDLKS 61
+S ++I L LVF + ++K ++ D V+E C +T LC +V+ SD S
Sbjct: 1230 DSEEVMITLKKLVFYLDKLVAAEDSKASDKDLVQELCKRTSNSTLCSTVIKSDPRSKSTS 1289
Query: 62 NLTGFLTIFTNQSFYVVVNTHTYIYNQLKDGQLTNRMKQVLIGCLEQYRMSEETL----G 121
+ GFL I +Q T Y+ + LK + L C Y + E L G
Sbjct: 1290 DYRGFLGIILDQILPTTKATKAYLVDLLKKNTTDKVTHECLQICNRLYDEAIEDLNSAMG 1349
Query: 122 YLFEEKLLKQHILDLTPYLSLVAGWLNVCEDDFEGFTQEPSTLKSLYDHALSLLMLSLDM 181
++ + ++ + L L CE+ F+ PS + S+ +H +++ +++LD+
Sbjct: 1350 LVYFKN--REGYIYLNDALGSFLHEFLDCENTFKEPPSRPSPITSVDNHLVNIGLIALDI 1409
Query: 182 SNLIKCGRV 186
NLI+C +
Sbjct: 1410 VNLIECNHI 1416
BLAST of Lcy08g003290 vs. ExPASy TrEMBL
Match:
M1DL66 (Pectinesterase inhibitor OS=Solanum tuberosum OX=4113 PE=4 SV=1)
HSP 1 Score: 54.3 bits (129), Expect = 6.5e-04
Identity = 49/183 (26.78%), Postives = 83/183 (45.36%), Query Frame = 0
Query: 2 NSSPILIVLILLVFSTAANIIDPETKVANDFVRETCNKTERKELCISVVDSDLHEDLKSN 61
+S+P LIV +LL+ T T V D + + C+KT+ ++C+SV+ D SN
Sbjct: 6 SSAPFLIVSLLLISVTL-------TSVKADLINDICSKTQENDVCLSVLRED-PRSKDSN 65
Query: 62 LTGFLTI---FTNQSFYVVVNTHTYIYNQLKDGQLTNRMKQVLIGCLEQYRMSEETLGYL 121
L +TI + + V N ++N+ + L R C E Y + LGYL
Sbjct: 66 LKDLMTIAIDLSQNNTQYVRNLVAMLFNKETNSTLKTRYSL----CWENYNDAIANLGYL 125
Query: 122 FEEKLLKQHILDLTPYLSLVAGWLNVCEDDFEGFTQEPSTLKSLYDHALSLLMLSLDMSN 181
+ L + L + S + C+D+F EP+ LK ++ L+ + L ++
Sbjct: 126 -PDLLKSKDYEGLNMHASAALSEPSKCDDNFSELPVEPAQLKVANENLRELIDIILVINK 175
BLAST of Lcy08g003290 vs. NCBI nr
Match:
KAG6585821.1 (hypothetical protein SDJN03_18554, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 179.5 bits (454), Expect = 2.7e-41
Identity = 94/186 (50.54%), Postives = 129/186 (69.35%), Query Frame = 0
Query: 1 MNSSPILIVLILLVFSTAANIIDPETKVANDFVRETCNKT-ERKELCISVVDSDLHEDLK 60
MN S ++ L+ S AAN +DPE K +DF R TC++T E K+LCISV++S+ EDLK
Sbjct: 1 MNQS-FVVFFTYLLLSAAANTLDPEMKAGSDFTRATCDRTSELKDLCISVINSNPCEDLK 60
Query: 61 SNLTGFLTIFTNQSFYVVVNTHTYIYNQLKDGQLTNRMKQVLIGCLEQYRMSEETLGYLF 120
SNLTGFL IF N++ +VV++ H+Y+ NQ +GQL NR QV C QY+MS+++L L
Sbjct: 61 SNLTGFLAIFINETLHVVIDDHSYLLNQTLNGQLDNRTLQVFRSCASQYQMSKDSLRVLL 120
Query: 121 EEKLLKQHILDLTPYLSLVAGWLNVCEDDFEGFTQEPSTLKSLYDHALSLLMLSLDMSNL 180
E++LLKQH DL L + +L +CE +FEGF +EPS K+ YD+ SLL+LSL +NL
Sbjct: 121 EDELLKQHNADLNMDLGQIDNYLALCEMEFEGFIEEPSAWKTRYDYVSSLLILSLQTTNL 180
Query: 181 IKCGRV 186
IKC R+
Sbjct: 181 IKCNRI 185
BLAST of Lcy08g003290 vs. NCBI nr
Match:
KAG6599042.1 (hypothetical protein SDJN03_08820, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 176.8 bits (447), Expect = 1.8e-40
Identity = 97/187 (51.87%), Postives = 131/187 (70.05%), Query Frame = 0
Query: 1 MNSSPILIVLI-LLVFSTAANIIDPETKVANDFVRETCNKTER-KELCISVVDSDLHEDL 60
MN S +++VL+ +LV AANI+D E +VANDFV +TCNKTE K+LC SV+ SD +DL
Sbjct: 1 MNQSIVVVVLVSVLVSFVAANILDLEMEVANDFVHDTCNKTEELKDLCNSVIGSDPRDDL 60
Query: 61 KSNLTGFLTIFTNQSFYVVVNTHTYIYNQLKDGQLTNRMKQVLIGCLEQYRMSEETLGYL 120
K+NLT LTIF NQ+ VVV+ H+Y+YNQ +G+L NR +V C+ Y+MS+++L L
Sbjct: 61 KTNLTSLLTIFINQTLRVVVDDHSYLYNQTLNGELDNRTLEVFKSCMNLYQMSKDSLQAL 120
Query: 121 FEEKLLKQHILDLTPYLSLVAGWLNVCEDDFEGFTQEPSTLKSLYDHALSLLMLSLDMSN 180
+ +LLK DL L+ V +L++CE DFEGFT E T KS YD+ SLL+LSL M+N
Sbjct: 121 LDVELLKNKNADLNMDLAQVDNFLDLCEVDFEGFTPESLTWKSRYDYVSSLLILSLRMTN 180
Query: 181 LIKCGRV 186
LIKC +
Sbjct: 181 LIKCNHI 187
BLAST of Lcy08g003290 vs. NCBI nr
Match:
KAG6599036.1 (hypothetical protein SDJN03_08814, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 159.5 bits (402), Expect = 2.9e-35
Identity = 77/160 (48.12%), Postives = 111/160 (69.38%), Query Frame = 0
Query: 27 KVANDFVRETCNKTER-KELCISVVDSDLHEDLKSNLTGFLTIFTNQSFYVVVNTHTYIY 86
K NDF+++TCN+TE K+LCISV+DSD EDLK N FL IF N++ V+++ H+Y+
Sbjct: 2 KAPNDFIQDTCNRTEDFKDLCISVIDSDPREDLKLNSMDFLVIFINRTLQVIIDDHSYLL 61
Query: 87 NQLKDGQLTNRMKQVLIGCLEQYRMSEETLGYLFEEKLLKQHILDLTPYLSLVAGWLNVC 146
NQ + +L NR + + +GC+ Y+MS+++L L E+LLKQ DL L + G+L++C
Sbjct: 62 NQTLNEELDNRTRHIFMGCMTLYQMSKDSLRVLLNEELLKQPNADLNMKLQQIEGYLDLC 121
Query: 147 EDDFEGFTQEPSTLKSLYDHALSLLMLSLDMSNLIKCGRV 186
++DFEGFT PST S YD+ +SLL+LS M NLIKC +
Sbjct: 122 QNDFEGFTPTPSTWTSRYDYVISLLILSFRMMNLIKCNYI 161
BLAST of Lcy08g003290 vs. NCBI nr
Match:
XP_022137307.1 (uncharacterized protein LOC111008804 [Momordica charantia])
HSP 1 Score: 100.9 bits (250), Expect = 1.2e-17
Identity = 66/160 (41.25%), Postives = 85/160 (53.12%), Query Frame = 0
Query: 28 VANDFVRETCNKTERK--ELCISVVDSDLHEDLKSNLTGFLTIFTNQSFYVVVNTHTYIY 87
VAN FV TCNK E + ++CI V+DSD H+DLK NL+G L IF N S + H Y+
Sbjct: 9 VANSFVNNTCNKFEEEFIKVCIDVIDSDPHQDLKLNLSGLLAIFINHSIDNATDNHLYLM 68
Query: 88 NQLKDGQLTNRMKQVLIGCLEQYRMSEETLGYLFEEKLLKQHILDLTPYLSLVAGWLNVC 147
QLK L ++ C+EQY + L E LLK DL LS + C
Sbjct: 69 EQLKRSDLDKDIRYTFNVCVEQYERGLDILKSSL-EALLKNDKDDLGLILSDAFDKIVAC 128
Query: 148 EDDFEGFTQEPSTLKSLYDHALSLLMLSLDMSNLIKCGRV 186
EDDFE T EP + + Y LL LS+ +NLI+C +V
Sbjct: 129 EDDFES-TPEPPSWLAHYLPLRKLLALSMGTANLIQCKKV 166
BLAST of Lcy08g003290 vs. NCBI nr
Match:
KAA0055284.1 (putative invertase inhibitor [Cucumis melo var. makuwa] >TYJ99207.1 putative invertase inhibitor [Cucumis melo var. makuwa])
HSP 1 Score: 89.7 bits (221), Expect = 2.9e-14
Identity = 62/180 (34.44%), Postives = 91/180 (50.56%), Query Frame = 0
Query: 6 ILIVLILLVFSTAANIIDPETKVANDFVRETCNKT-ERKELCISVVDSDLHEDLKSNLTG 65
+L+ ++ L T A+ + NDFVR TCN+T E K LC+S + S+ DLKSNLTG
Sbjct: 9 VLLCILSLCMLTKAD----QNTTINDFVRHTCNRTHELKNLCLSQISSEPRNDLKSNLTG 68
Query: 66 FLTIFTNQSFYVVVNTHTYIYNQLKDGQLTNRMKQVLIGCLEQYRMSEETLGYLFEEKLL 125
L IF NQS N +++ ++ +++ K +L CL+ +++ L E
Sbjct: 69 LLMIFVNQSISNFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQT 128
Query: 126 KQHILDLTPYLSLVAGWLNVCEDDFEGFTQEPSTLKSLYDHALSLLMLSLDMSNLIKCGR 185
K + V C DDFEG T P +S Y+ + +LL LS+ M NLI C R
Sbjct: 129 KTGYDAEQLPVGNVGNLAVECFDDFEG-TPVPPEWQSRYNASFALLKLSMAMINLITCNR 183
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1C7W5 | 6.0e-18 | 41.25 | uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
A0A5D3BJB5 | 1.4e-14 | 34.44 | Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
A0A1R3IZD3 | 3.4e-05 | 25.40 | TPR_REGION domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL... | [more] |
M1DL66 | 6.5e-04 | 26.78 | Pectinesterase inhibitor OS=Solanum tuberosum OX=4113 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAG6585821.1 | 2.7e-41 | 50.54 | hypothetical protein SDJN03_18554, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6599042.1 | 1.8e-40 | 51.87 | hypothetical protein SDJN03_08820, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6599036.1 | 2.9e-35 | 48.13 | hypothetical protein SDJN03_08814, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022137307.1 | 1.2e-17 | 41.25 | uncharacterized protein LOC111008804 [Momordica charantia] | [more] |
KAA0055284.1 | 2.9e-14 | 34.44 | putative invertase inhibitor [Cucumis melo var. makuwa] >TYJ99207.1 putative inv... | [more] |
Match Name | E-value | Identity | Description | |