Lcy08g001720 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g001720
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	ULP_PROTEASE domain-containing protein
Location	Chr08: 2252732 .. 2253402 (-)
RNA-Seq Expression	Lcy08g001720
Synteny	Lcy08g001720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAGATCATTGGATGAAGAGAACAAAGATGATGATTTGGAGAATAGAGTGGAAACAGTTAAAGTAGCTCATGCTACAAATCCTCCGATGAGTGATTGCAATCGAAATATTTCTAAAACATCTTATATCAAGTTCAATTGTAACGAGAGGAAAACACGTGGTGCAACTACAATGCGTGAAATTACTCAATGTAGTAGCCAAGGGGAGAGAAAAGTAGTAAAGTATAACGACTATGGACAACCAATTGGTGTGAATGCAGCAAAACTGAAGAGTTTCATTGGCGTATGTGTCCATTATCATGTCCCAATCACTTATGCTACTTGGAAACATGTACCTAATGCAATAAAGGAAAACATTTTTAAGTTGATTCAGGTAGAATCCATTTAACTTCTATCATTTATTTGTTCATTTTCTCAAATTGAAGGTAATATTATCTTGAATATCTGCAGGCTGGTTTTGTTATTCGTAGACAGACAAAAAAGTCCATCTTACAAGTTGCTGGTACTTCATTCCGTCAATTTAAAAGTCGGTTGACGACTCATTATATCATTCCTTACAAAGATCAGCCACAACTTTTGGGAAATCCTCCAGATATCTATTCGCACATTGAGAGACATCATTGGCATCAATTTGTAAAATCTCGATTGAGCAAAGAATTTGAGGTATGA

mRNA sequence

ATGGACAGATCATTGGATGAAGAGAACAAAGATGATGATTTGGAGAATAGAGTGGAAACAGTTAAAGTAGCTCATGCTACAAATCCTCCGATGAGTGATTGCAATCGAAATATTTCTAAAACATCTTATATCAAGTTCAATTGTAACGAGAGGAAAACACGTGGTGCAACTACAATGCGTGAAATTACTCAATGTAGTAGCCAAGGGGAGAGAAAAGTAGTAAAGTATAACGACTATGGACAACCAATTGGTGTGAATGCAGCAAAACTGAAGAGTTTCATTGGCGTATGTGTCCATTATCATGTCCCAATCACTTATGCTACTTGGAAACATGTACCTAATGCAATAAAGGAAAACATTTTTAAGTTGATTCAGGCTGGTTTTGTTATTCGTAGACAGACAAAAAAGTCCATCTTACAAGTTGCTGGTACTTCATTCCGTCAATTTAAAAGTCGGTTGACGACTCATTATATCATTCCTTACAAAGATCAGCCACAACTTTTGGGAAATCCTCCAGATATCTATTCGCACATTGAGAGACATCATTGGCATCAATTTGTAAAATCTCGATTGAGCAAAGAATTTGAGGTATGA

Coding sequence (CDS)

ATGGACAGATCATTGGATGAAGAGAACAAAGATGATGATTTGGAGAATAGAGTGGAAACAGTTAAAGTAGCTCATGCTACAAATCCTCCGATGAGTGATTGCAATCGAAATATTTCTAAAACATCTTATATCAAGTTCAATTGTAACGAGAGGAAAACACGTGGTGCAACTACAATGCGTGAAATTACTCAATGTAGTAGCCAAGGGGAGAGAAAAGTAGTAAAGTATAACGACTATGGACAACCAATTGGTGTGAATGCAGCAAAACTGAAGAGTTTCATTGGCGTATGTGTCCATTATCATGTCCCAATCACTTATGCTACTTGGAAACATGTACCTAATGCAATAAAGGAAAACATTTTTAAGTTGATTCAGGCTGGTTTTGTTATTCGTAGACAGACAAAAAAGTCCATCTTACAAGTTGCTGGTACTTCATTCCGTCAATTTAAAAGTCGGTTGACGACTCATTATATCATTCCTTACAAAGATCAGCCACAACTTTTGGGAAATCCTCCAGATATCTATTCGCACATTGAGAGACATCATTGGCATCAATTTGTAAAATCTCGATTGAGCAAAGAATTTGAGGTATGA

Protein sequence

MDRSLDEENKDDDLENRVETVKVAHATNPPMSDCNRNISKTSYIKFNCNERKTRGATTMREITQCSSQGERKVVKYNDYGQPIGVNAAKLKSFIGVCVHYHVPITYATWKHVPNAIKENIFKLIQAGFVIRRQTKKSILQVAGTSFRQFKSRLTTHYIIPYKDQPQLLGNPPDIYSHIERHHWHQFVKSRLSKEFEV

Homology

[Close]

BLAST of Lcy08g001720 vs. ExPASy TrEMBL
Match: A0A6J1D4R5 (uncharacterized protein LOC111017298 OS=Momordica charantia OX=3673 GN=LOC111017298 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.4e-78
Identity = 144/196 (73.47%), Postives = 165/196 (84.18%), Query Frame = 0


Query: 1   MDRSLDEENKDDDLENRVETVKVAHATNPPMSDCNRNISKTSYIKFNCNERKTRGATTMR 60
           MD SL+EE++ D+L+N  + VK AHATNP MS CN+N  KTSY+K +CN+++ RG TTMR
Sbjct: 192 MDNSLEEESEGDELDNITKMVKAAHATNPLMSGCNQNTPKTSYMKLDCNKKRVRGPTTMR 251

Query: 61  EITQCSSQGERKVVKYNDYGQPIGVNAAKLKSFIGVCVHYHVPITYATWKHVPNAIKENI 120
           EIT+CSSQG+RKVV+YNDYGQPIGVN AKLKS+IG CVHYHVPITY+TWK VPN  KE I
Sbjct: 252 EITRCSSQGDRKVVEYNDYGQPIGVNGAKLKSYIGSCVHYHVPITYSTWKRVPNGTKEKI 311

Query: 121 FKLIQAGFVIRRQTKKSILQVAGTSFRQFKSRLTTHYIIPYKDQPQLLGNPPDIYSHIER 180
           FKLIQAG VI   +KKSILQ AG SFRQFKSRLTTH+IIP+KDQP  L NPPD YSHIE 
Sbjct: 312 FKLIQAGXVIDAGSKKSILQAAGNSFRQFKSRLTTHFIIPFKDQPHRLENPPDTYSHIES 371

Query: 181 HHWHQFVKSRLSKEFE 197
           HHW QFVKSRLS+EFE
Sbjct: 372 HHWRQFVKSRLSEEFE 387

[Close]

BLAST of Lcy08g001720 vs. ExPASy TrEMBL
Match: A0A5D3DME5 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00220 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.8e-41
Identity = 83/146 (56.85%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 51  RKTRGATTMREITQCSSQGERKVVKYNDYGQPIGVNAAKLKSFIGVCVHYHVPITYATWK 110
           ++ RG T M ++T+  S G++KVV+YN+ G PIG N AKLKSFIG   HYHVPITY +WK
Sbjct: 25  KRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGENGAKLKSFIGSATHYHVPITYMSWK 84

Query: 111 HVPNAIKENIFKLIQAGFVIRRQTKKSILQVAGTSFRQFKSRLTTHYIIPYKDQPQLLGN 170
            VP  +K+ IF  ++A FVI  +++K++LQ AG SFRQFK+ LTT YIIP+KD+PQLL  
Sbjct: 85  SVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQV 144

Query: 171 PPDIYSHIERHHWHQFVKSRLSKEFE 197
           PP+ YS IE++HW +FV+SRLS+ F+
Sbjct: 145 PPEKYSFIEQNHWEEFVRSRLSETFQ 170

[Close]

BLAST of Lcy08g001720 vs. ExPASy TrEMBL
Match: A0A5D3C8G6 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G001550 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.8e-41
Identity = 83/146 (56.85%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 51  RKTRGATTMREITQCSSQGERKVVKYNDYGQPIGVNAAKLKSFIGVCVHYHVPITYATWK 110
           ++ RG T M ++T+  S G++KVV+YN+ G PIG N AKLKSFIG   HYHVPITY +WK
Sbjct: 25  KRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGENGAKLKSFIGSATHYHVPITYMSWK 84

Query: 111 HVPNAIKENIFKLIQAGFVIRRQTKKSILQVAGTSFRQFKSRLTTHYIIPYKDQPQLLGN 170
            VP  +K+ IF  ++A FVI  +++K++LQ AG SFRQFK+ LTT YIIP+KD+PQLL  
Sbjct: 85  SVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQV 144

Query: 171 PPDIYSHIERHHWHQFVKSRLSKEFE 197
           PP+ YS IE++HW +FV+SRLS+ F+
Sbjct: 145 PPEKYSFIEQNHWEEFVRSRLSETFQ 170

[Close]

BLAST of Lcy08g001720 vs. ExPASy TrEMBL
Match: A0A5D3C8G8 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00550 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.8e-41
Identity = 83/146 (56.85%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 51  RKTRGATTMREITQCSSQGERKVVKYNDYGQPIGVNAAKLKSFIGVCVHYHVPITYATWK 110
           ++ RG T M ++T+  S G++KVV+YN+ G PIG N AKLKSFIG   HYHVPITY +WK
Sbjct: 25  KRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGENGAKLKSFIGSATHYHVPITYMSWK 84

Query: 111 HVPNAIKENIFKLIQAGFVIRRQTKKSILQVAGTSFRQFKSRLTTHYIIPYKDQPQLLGN 170
            VP  +K+ IF  ++A FVI  +++K++LQ AG SFRQFK+ LTT YIIP+KD+PQLL  
Sbjct: 85  SVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQV 144

Query: 171 PPDIYSHIERHHWHQFVKSRLSKEFE 197
           PP+ YS IE++HW +FV+SRLS+ F+
Sbjct: 145 PPEKYSFIEQNHWEEFVRSRLSETFQ 170

[Close]

BLAST of Lcy08g001720 vs. ExPASy TrEMBL
Match: A0A5A7UXT2 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G00100 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.8e-41
Identity = 83/146 (56.85%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 51  RKTRGATTMREITQCSSQGERKVVKYNDYGQPIGVNAAKLKSFIGVCVHYHVPITYATWK 110
           ++ RG T M ++T+  S G++KVV+YN+ G PIG N AKLKSFIG   HYHVPITY +WK
Sbjct: 25  KRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGENGAKLKSFIGSATHYHVPITYMSWK 84

Query: 111 HVPNAIKENIFKLIQAGFVIRRQTKKSILQVAGTSFRQFKSRLTTHYIIPYKDQPQLLGN 170
            VP  +K+ IF  ++A FVI  +++K++LQ AG SFRQFK+ LTT YIIP+KD+PQLL  
Sbjct: 85  SVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLHV 144

Query: 171 PPDIYSHIERHHWHQFVKSRLSKEFE 197
           PP+ YS IE++HW +FV+SRLS+ F+
Sbjct: 145 PPEKYSFIEQNHWEEFVRSRLSETFQ 170

[Close]

BLAST of Lcy08g001720 vs. NCBI nr
Match: XP_022148697.1 (uncharacterized protein LOC111017298 [Momordica charantia] >XP_022148698.1 uncharacterized protein LOC111017298 [Momordica charantia] >XP_022148699.1 uncharacterized protein LOC111017298 [Momordica charantia])

HSP 1 Score: 301.6 bits (771), Expect = 5.0e-78
Identity = 144/196 (73.47%), Postives = 165/196 (84.18%), Query Frame = 0


Query: 1   MDRSLDEENKDDDLENRVETVKVAHATNPPMSDCNRNISKTSYIKFNCNERKTRGATTMR 60
           MD SL+EE++ D+L+N  + VK AHATNP MS CN+N  KTSY+K +CN+++ RG TTMR
Sbjct: 192 MDNSLEEESEGDELDNITKMVKAAHATNPLMSGCNQNTPKTSYMKLDCNKKRVRGPTTMR 251

Query: 61  EITQCSSQGERKVVKYNDYGQPIGVNAAKLKSFIGVCVHYHVPITYATWKHVPNAIKENI 120
           EIT+CSSQG+RKVV+YNDYGQPIGVN AKLKS+IG CVHYHVPITY+TWK VPN  KE I
Sbjct: 252 EITRCSSQGDRKVVEYNDYGQPIGVNGAKLKSYIGSCVHYHVPITYSTWKRVPNGTKEKI 311

Query: 121 FKLIQAGFVIRRQTKKSILQVAGTSFRQFKSRLTTHYIIPYKDQPQLLGNPPDIYSHIER 180
           FKLIQAG VI   +KKSILQ AG SFRQFKSRLTTH+IIP+KDQP  L NPPD YSHIE 
Sbjct: 312 FKLIQAGXVIDAGSKKSILQAAGNSFRQFKSRLTTHFIIPFKDQPHRLENPPDTYSHIES 371

Query: 181 HHWHQFVKSRLSKEFE 197
           HHW QFVKSRLS+EFE
Sbjct: 372 HHWRQFVKSRLSEEFE 387

[Close]

BLAST of Lcy08g001720 vs. NCBI nr
Match: TYK01338.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-41
Identity = 83/146 (56.85%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 51  RKTRGATTMREITQCSSQGERKVVKYNDYGQPIGVNAAKLKSFIGVCVHYHVPITYATWK 110
           ++ RG T M ++T+  S G++KVV+YN+ G PIG N AKLKSFIG   HYHVPITY +WK
Sbjct: 25  KRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGENGAKLKSFIGSATHYHVPITYMSWK 84

Query: 111 HVPNAIKENIFKLIQAGFVIRRQTKKSILQVAGTSFRQFKSRLTTHYIIPYKDQPQLLGN 170
            VP  +K+ IF  ++A FVI  +++K++LQ AG SFRQFK+ LTT YIIP+KD+PQLL  
Sbjct: 85  SVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQV 144

Query: 171 PPDIYSHIERHHWHQFVKSRLSKEFE 197
           PP+ YS IE++HW +FV+SRLS+ F+
Sbjct: 145 PPEKYSFIEQNHWEEFVRSRLSETFQ 170

[Close]

BLAST of Lcy08g001720 vs. NCBI nr
Match: TYK24336.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] >TYK24781.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-41
Identity = 83/146 (56.85%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 51  RKTRGATTMREITQCSSQGERKVVKYNDYGQPIGVNAAKLKSFIGVCVHYHVPITYATWK 110
           ++ RG T M ++T+  S G++KVV+YN+ G PIG N AKLKSFIG   HYHVPITY +WK
Sbjct: 25  KRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGENGAKLKSFIGSATHYHVPITYMSWK 84

Query: 111 HVPNAIKENIFKLIQAGFVIRRQTKKSILQVAGTSFRQFKSRLTTHYIIPYKDQPQLLGN 170
            VP  +K+ IF  ++A FVI  +++K++LQ AG SFRQFK+ LTT YIIP+KD+PQLL  
Sbjct: 85  SVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQV 144

Query: 171 PPDIYSHIERHHWHQFVKSRLSKEFE 197
           PP+ YS IE++HW +FV+SRLS+ F+
Sbjct: 145 PPEKYSFIEQNHWEEFVRSRLSETFQ 170

[Close]

BLAST of Lcy08g001720 vs. NCBI nr
Match: TYK29003.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-41
Identity = 83/146 (56.85%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 51  RKTRGATTMREITQCSSQGERKVVKYNDYGQPIGVNAAKLKSFIGVCVHYHVPITYATWK 110
           ++ RG T M ++T+  S G++KVV+YN+ G PIG N AKLKSFIG   HYHVPITY +WK
Sbjct: 25  KRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGENGAKLKSFIGSATHYHVPITYMSWK 84

Query: 111 HVPNAIKENIFKLIQAGFVIRRQTKKSILQVAGTSFRQFKSRLTTHYIIPYKDQPQLLGN 170
            VP  +K+ IF  ++A FVI  +++K++LQ AG SFRQFK+ LTT YIIP+KD+PQLL  
Sbjct: 85  SVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQV 144

Query: 171 PPDIYSHIERHHWHQFVKSRLSKEFE 197
           PP+ YS IE++HW +FV+SRLS+ F+
Sbjct: 145 PPEKYSFIEQNHWEEFVRSRLSETFQ 170

[Close]

BLAST of Lcy08g001720 vs. NCBI nr
Match: KAA0060814.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-41
Identity = 83/146 (56.85%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 51  RKTRGATTMREITQCSSQGERKVVKYNDYGQPIGVNAAKLKSFIGVCVHYHVPITYATWK 110
           ++ RG T M ++T+  S G++KVV+YN+ G PIG N AKLKSFIG   HYHVPITY +WK
Sbjct: 25  KRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGENGAKLKSFIGSATHYHVPITYMSWK 84

Query: 111 HVPNAIKENIFKLIQAGFVIRRQTKKSILQVAGTSFRQFKSRLTTHYIIPYKDQPQLLGN 170
            VP  +K+ IF  ++A FVI  +++K++LQ AG SFRQFK+ LTT YIIP+KD+PQLL  
Sbjct: 85  SVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYIIPHKDEPQLLQV 144

Query: 171 PPDIYSHIERHHWHQFVKSRLSKEFE 197
           PP+ YS IE++HW +FV+SRLS+ F+
Sbjct: 145 PPEKYSFIEQNHWEEFVRSRLSETFQ 170

The following BLAST results are available for this feature:

BLAST of Lcy08g001720 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy08g001720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D4R5	2.4e-78	73.47	uncharacterized protein LOC111017298 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5D3DME5	1.8e-41	56.85	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3C8G6	1.8e-41	56.85	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3C8G8	1.8e-41	56.85	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7UXT2	1.8e-41	56.85	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Lcy08g001720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148697.1	5.0e-78	73.47	uncharacterized protein LOC111017298 [Momordica charantia] >XP_022148698.1 uncha...	[more]
TYK01338.1	3.7e-41	56.85	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
TYK24336.1	3.7e-41	56.85	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] >TYK247...	[more]
TYK29003.1	3.7e-41	56.85	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
KAA0060814.1	3.7e-41	56.85	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]

BLAST of Lcy08g001720 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33144:SF22	PLANT TRANSPOSASE (PTTA/EN/SPM FAMILY)	coord: 35..195
None	No IPR available	PANTHER	PTHR33144	OS10G0409366 PROTEIN-RELATED	coord: 35..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g001720.1	Lcy08g001720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0016787	hydrolase activity