Lcy08g001420 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g001420
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	transcription factor bHLH85-like
Location	Chr08: 1955629 .. 1958174 (-)
RNA-Seq Expression	Lcy08g001420
Synteny	Lcy08g001420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAACTCAATGGCCCCATTGGAGATGGAGAATGGAGCTCTCTCAGTGGAAACTTCATAGCTGATGAAGAAGAAGAAGCAAATTTCATGGCTCAACTTTTCAACAGTACCACAGCTCCTGATAAACCTCCTTTCATGGCTGCCCTTGATCTTCATCAATTAGCTTCTTCTTCTTCTTCCTATTCTTCTTCTTCAAGCTTTTATAATAATTATTGCAGCCAATTATTATTCCCCACTGAAAATGATAGTTATTATTGCAATCCCATGATGAGTTTTTGCTTGGGAGAGCTTGGAATCAATAACAATGGTGGTGAAGATGAGGACTCCATGAATCTAGAGAGTAATTTGAGGCCTTTTTCTGAAGCTGAGTTGACTAAATTACCTGAAGAAGAAGCTGCCATTGATGACCAGCTTGAGATCAATTGCAAGAAAAGATCAAGGGGATCTGGTGATGTAAGTTTATAGGATTTGCCCATTGATTCATCTTTCTAACCATGCATGTTTAAATTTTGTTAGGTTGTTGCTTAAGCTTTTGAGTTTAGTCGTGTTTCTGCTAAAAAAAAAAAAATTAAGAATGCCTACCACATTGGTAATTCCATCAATTACTCGTCAATCAGAAAAATAAGTTAATTCCGCTAATAATTTTTTTGAAAAAAAATTGTAAATATGGGTAGATACAAAAGTCGTTAGTTTAGATATTTATGGGGTTTTTATCGATTGTGTTTTTTTTAAGGGTAAAAAACACTTTTGGTCTATGAACTTTTCATGGAAGCAACAATATTTAATCTCTTAACTTTAGTTTGTAACGATTTAGTCCTTGTACATTCAGTTTTGTAACAATTTAAGTCCTTAAACTTTAAAATTTGTAACAATTTAGTCCTTGTCGTGAAAATTTTCACCAAATTTAAGTGTCAATTCTTACTTTGTAGTATTAAATATACATGGTCCTAATCAAGTTATATCAATCTATATAGGTAAAAAAAAAATCTCATTAAATCTTAATAATATAATATTTTCACGACAGGGACTAAATCATTATAAATTTTAAAGTTCAATGACTAAATTGTTACAAAATTGAAAGTACAGTGATTAAATTGTTACAAACTAAAGTTCAAGAACTAAGTTACTACTTTTATGAAACTTCAGGGACTAAAAGTGTTTTTAAATTTATTTTATTGATAGTCCCGGTGTTACATCTCGTGTTAATACAAAAACCCACATGTGCAAGGAAACATTGGAATTTGGAAATACATCGAAAAGATTAAATTTATCTAAAAATTTATTTTAGTAATAATGATCTGACATCAGAAGAGTCGCCAAAGCGAGCTTAGCTTAGCGGTAATTAGCATGTATCATCGACCAAGAGGTCAGAAGTTTGAATCCTCCCACCCCAAATATTGATGTACTAAAAAAAAAATGACATTAGAAGAGTCATTTAAGAGGTTCGAATCTCTATACGGTAATTCTCTATGTTTTTTTTTTTTTTTAATAATTTTGTTTTTATTTCTTGTTGCTAATATCTTACCTTAAATATAATATAGAGCGTCTAGAATATATTGAAAAAATTAAATGTATTTTCGTGCAAACAACTTAAGCTTTTGGATTTAGAGTGACGTAATTTATACGAGGTTTTGGATTTAGATTTGTTATATTTTTGGTATTGTATAGTAATATGAGAACAATTAATATAATATTGAAAAAATTAAGAACTTTTGGGTTGATTCCTTATTCTACTCAACTATAGGTACAGAAGAGAAGGAATGAGAGGTCAAAGAAAACTCAGAAGCTTACCTCAAGCACCAACACTGAAGAAGATGGCAATAATGCTGGCCATAACAGGCAAAGCACAAGCAGCTATTGCTCGGAAGACGAATCCAACGCCTCTCTCGAGCTAAACGGAGGAGCTAATAACTCGGGATCGAGTCCGAAAGGACCGACCAAATCCCGAGCCAGCAGAGGCTCGGCTACAGATCCACAGAGCCTCTATGCAAGGGTAAGACGATGAAAAACCTTAGAATAAAACTTCCCTCATGGAAAATTGAAAAGTCCATTCATTTGTAATGTTTTTTTTTTTTTTTTTGGGTTACAGAGAAGAAGAGAAAGAATCAATGAGAGGTTGAGAATCTTACAGAATCTTGTCCCAAATGGAACAAAGGTAAAGACAAATCAAAAGAACCTTAAAAAAAAAAAATTAATGATGATTTATGTTGGAAAATAGTTGTCTTGATGAAATTGTCTCTTTTGGGATATGTAGGTTGATATCAGCACAATGCTAGAGGAAGCTGTTCAATATGTGAAGTTTCTACAACTCCAAATCAAGGTCATTACAAACAAACATAACATTACTTAAAAGACAATTTTGAAAATTTTACATGATCTTCAAAAGATCATCATTTTACACAATTAAATTTTTGACATCTTCATTTGAAATGATTATATTGCAGCTATTAAGCTCTGATGATTTATGGATGTACGCTCCGATCGCTTACAACGGAATGGATATCGGACTTAATCGGACCCCGAACACACGAAAAGAATCATGA

mRNA sequence

ATGGAGCAACTCAATGGCCCCATTGGAGATGGAGAATGGAGCTCTCTCAGTGGAAACTTCATAGCTGATGAAGAAGAAGAAGCAAATTTCATGGCTCAACTTTTCAACAGTACCACAGCTCCTGATAAACCTCCTTTCATGGCTGCCCTTGATCTTCATCAATTAGCTTCTTCTTCTTCTTCCTATTCTTCTTCTTCAAGCTTTTATAATAATTATTGCAGCCAATTATTATTCCCCACTGAAAATGATAGTTATTATTGCAATCCCATGATGAGTTTTTGCTTGGGAGAGCTTGGAATCAATAACAATGGTGGTGAAGATGAGGACTCCATGAATCTAGAGAGTAATTTGAGGCCTTTTTCTGAAGCTGAGTTGACTAAATTACCTGAAGAAGAAGCTGCCATTGATGACCAGCTTGAGATCAATTGCAAGAAAAGATCAAGGGGATCTGGTGATGTACAGAAGAGAAGGAATGAGAGGTCAAAGAAAACTCAGAAGCTTACCTCAAGCACCAACACTGAAGAAGATGGCAATAATGCTGGCCATAACAGGCAAAGCACAAGCAGCTATTGCTCGGAAGACGAATCCAACGCCTCTCTCGAGCTAAACGGAGGAGCTAATAACTCGGGATCGAGTCCGAAAGGACCGACCAAATCCCGAGCCAGCAGAGGCTCGGCTACAGATCCACAGAGCCTCTATGCAAGGAGAAGAAGAGAAAGAATCAATGAGAGGTTGAGAATCTTACAGAATCTTGTCCCAAATGGAACAAAGGTTGATATCAGCACAATGCTAGAGGAAGCTGTTCAATATGTGAAGTTTCTACAACTCCAAATCAAGCTATTAAGCTCTGATGATTTATGGATGTACGCTCCGATCGCTTACAACGGAATGGATATCGGACTTAATCGGACCCCGAACACACGAAAAGAATCATGA

Coding sequence (CDS)

ATGGAGCAACTCAATGGCCCCATTGGAGATGGAGAATGGAGCTCTCTCAGTGGAAACTTCATAGCTGATGAAGAAGAAGAAGCAAATTTCATGGCTCAACTTTTCAACAGTACCACAGCTCCTGATAAACCTCCTTTCATGGCTGCCCTTGATCTTCATCAATTAGCTTCTTCTTCTTCTTCCTATTCTTCTTCTTCAAGCTTTTATAATAATTATTGCAGCCAATTATTATTCCCCACTGAAAATGATAGTTATTATTGCAATCCCATGATGAGTTTTTGCTTGGGAGAGCTTGGAATCAATAACAATGGTGGTGAAGATGAGGACTCCATGAATCTAGAGAGTAATTTGAGGCCTTTTTCTGAAGCTGAGTTGACTAAATTACCTGAAGAAGAAGCTGCCATTGATGACCAGCTTGAGATCAATTGCAAGAAAAGATCAAGGGGATCTGGTGATGTACAGAAGAGAAGGAATGAGAGGTCAAAGAAAACTCAGAAGCTTACCTCAAGCACCAACACTGAAGAAGATGGCAATAATGCTGGCCATAACAGGCAAAGCACAAGCAGCTATTGCTCGGAAGACGAATCCAACGCCTCTCTCGAGCTAAACGGAGGAGCTAATAACTCGGGATCGAGTCCGAAAGGACCGACCAAATCCCGAGCCAGCAGAGGCTCGGCTACAGATCCACAGAGCCTCTATGCAAGGAGAAGAAGAGAAAGAATCAATGAGAGGTTGAGAATCTTACAGAATCTTGTCCCAAATGGAACAAAGGTTGATATCAGCACAATGCTAGAGGAAGCTGTTCAATATGTGAAGTTTCTACAACTCCAAATCAAGCTATTAAGCTCTGATGATTTATGGATGTACGCTCCGATCGCTTACAACGGAATGGATATCGGACTTAATCGGACCCCGAACACACGAAAAGAATCATGA

Protein sequence

MEQLNGPIGDGEWSSLSGNFIADEEEEANFMAQLFNSTTAPDKPPFMAALDLHQLASSSSSYSSSSSFYNNYCSQLLFPTENDSYYCNPMMSFCLGELGINNNGGEDEDSMNLESNLRPFSEAELTKLPEEEAAIDDQLEINCKKRSRGSGDVQKRRNERSKKTQKLTSSTNTEEDGNNAGHNRQSTSSYCSEDESNASLELNGGANNSGSSPKGPTKSRASRGSATDPQSLYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNRTPNTRKES

Homology

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BLAST of Lcy08g001420 vs. ExPASy Swiss-Prot
Match: Q84WK0 (Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 8.5e-43
Identity = 149/349 (42.69%), Postives = 198/349 (56.73%), Query Frame = 0


Query: 11  GEWSSLSGNFIADEEEEANFMAQLFNSTTAP--DKPPFMAALDLHQ-------------- 70
           GEWS+  G       EEA+FM QL  S   P        AA   HQ              
Sbjct: 5   GEWSNNLGGMYTYATEEADFMNQLLASYDHPGTGSSSGAAASGDHQGLYWNLGSHHNHLS 64

Query: 71  LASSSSSY-----SSSSSFYNNYCSQLLFPTENDSYYCNPMMSFCLGELGINNNG---GE 130
           L S + S+     SSS S  N+    ++ PT  ++   N  M F + ++ IN N    GE
Sbjct: 65  LVSEAGSFCFSQESSSYSAGNSGYYTVVPPTVEENQ--NETMDFGMEDVTINTNSYLVGE 124

Query: 131 DEDSMNLE-----SNLRPFSEAELTKLPEEEAAIDDQLEI-------NCKKRSRGSGDVQ 190
           +    ++E       L P  E  +    +EE+ +  ++ +         KKRSR +   +
Sbjct: 125 ETSECDVEKYSSGKTLMPL-ETVVENHDDEESLLQSEISVTTTKSLTGSKKRSRATSTDK 184

Query: 191 KRR---NERSKKTQKLTSSTN--TEEDG--------NNAGHNRQ-STSSYCSEDESNASL 250
            +R   N+R++K  +++   N   EE+G        N A  +RQ S++++C+E+ESN + 
Sbjct: 185 NKRARVNKRAQKNVEMSGDNNEGEEEEGETKLKKRKNGAMMSRQNSSTTFCTEEESNCA- 244

Query: 251 ELNGGANNSGSSPKGPT-------KSRASRGSATDPQSLYARRRRERINERLRILQNLVP 303
           + +GG  +S S    P+       K+RASRG+ATDPQSLYAR+RRERINERLRILQNLVP
Sbjct: 245 DQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVP 304

[Close]

BLAST of Lcy08g001420 vs. ExPASy Swiss-Prot
Match: Q7XHI9 (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.1e-37
Identity = 140/339 (41.30%), Postives = 180/339 (53.10%), Query Frame = 0


Query: 11  GEWSSLSGNFIADEEEEANFMAQLFNSTTAPDKPPFMAALDLHQLASSSSSYSSSSSFYN 70
           GEWS+  G       EEA+FM QL  S   P                SSS  +++ + Y+
Sbjct: 5   GEWSTGLGGIYT---EEADFMNQLLASYEQP-------------CGGSSSETTATLTAYH 64

Query: 71  NYCSQ----LLFPTENDSY--YCNPMMSFCLGELGINNNGGEDED-SMNLESNLRPFSEA 130
           +  SQ      F  E+ SY  YC  M          +NNG ED   + NL       SE 
Sbjct: 65  HQGSQWNGGFCFSQESSSYSGYCAAM-----PRQEEDNNGMEDATINTNLYLVGEETSEC 124

Query: 131 ELTK------LPEEEAA-----------------IDDQLEINC---KKRSRGSGDVQKRR 190
           + T+      LP E  A                  D+++   C   KKR+R +   + +R
Sbjct: 125 DATEYSGKSLLPLETVAENHDHSMLQPENSLTTTTDEKMFNQCESSKKRTRATTTDKNKR 184

Query: 191 NERSKKTQKLTSSTNTEEDGNNAGHNRQST-----------SSYCSEDESNAS---LELN 250
             +++++QK    +   E+     +  ++             + CS+DESN     L   
Sbjct: 185 ANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKTCCSDDESNGGDTFLSKE 244

Query: 251 GGANNSGSSPKGPTKSRASRGSATDPQSLYARRRRERINERLRILQNLVPNGTKVDISTM 303
            G ++   +  G  K+RASRG+ATDPQSLYAR+RRERINERLRILQ+LVPNGTKVDISTM
Sbjct: 245 DGEDSKALNLNG--KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTM 304

[Close]

BLAST of Lcy08g001420 vs. ExPASy Swiss-Prot
Match: Q8LEG1 (Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.8e-35
Identity = 92/164 (56.10%), Postives = 122/164 (74.39%), Query Frame = 0


Query: 139 LEINCKKRSRGSGDVQKRRNERSKKTQKLTSSTNTEEDGNNAGHNRQSTSSYCSEDESNA 198
           L++    ++  + DV ++   +SKK Q+++S +NT ++ N    + QS S+  S D+  A
Sbjct: 101 LDVENLCKTNSNCDVTRQELAKSKKKQRVSSESNTVDESNTNWVDGQSLSN--SSDDEKA 160

Query: 199 SLELNGGANNSGSSPKGPTKSRASRGSATDPQSLYARRRRERINERLRILQNLVPNGTKV 258
           S+          +S KG  K+RA++G+ATDPQSLYAR+RRE+INERL+ LQNLVPNGTKV
Sbjct: 161 SV----------TSVKG--KTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV 220

Query: 259 DISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 303
           DISTMLEEAV YVKFLQLQIKLLSSDDLWMYAP+AYNG+D+G +
Sbjct: 221 DISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPLAYNGLDMGFH 250

[Close]

BLAST of Lcy08g001420 vs. ExPASy Swiss-Prot
Match: Q3E7L7 (Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.6e-31
Identity = 101/226 (44.69%), Postives = 135/226 (59.73%), Query Frame = 0


Query: 81  ENDSYYCNPMMSFCLGELGINNNGGEDEDSMNLESNLRPFSEAEL----TKLPEEEAAID 140
           EN+++    + S  LG    +     +    N  +    FS  +     T L    AA+ 
Sbjct: 2   ENEAFVDGELESL-LGMFNFDQCSSNESSFCNAPNETDVFSSDDFFPFGTILQSNYAAVL 61

Query: 141 DQLEINCKKRSRGSGDVQKRRNERSKKTQKLTSSTNTEEDGNNAGHNRQSTSSYCSEDES 200
           D       +      D+ K R     K QKL+S +N   +   A  + QS SSY S D+ 
Sbjct: 62  DGSNHQTNRNVDSRQDLLKPR-----KKQKLSSESNLVTEPKTAWRDGQSLSSYNSSDDE 121

Query: 201 NASLELNGGANNSGSSPKGPTKSRASRGSATDPQSLYARRRRERINERLRILQNLVPNGT 260
            A     G  +N+  S K   K++A+RG A+DPQSLYAR+RRERIN+RL+ LQ+LVPNGT
Sbjct: 122 KAL----GLVSNTSKSLK--RKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGT 181

Query: 261 KVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 303
           KVDISTMLE+AV YVKFLQLQIKLLSS+DLWMYAP+A+NG+++GL+
Sbjct: 182 KVDISTMLEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNMGLH 215

[Close]

BLAST of Lcy08g001420 vs. ExPASy Swiss-Prot
Match: Q2QQ32 (Transcription factor BHLH133 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH133 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-24
Identity = 59/79 (74.68%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 225 SATDPQSLYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSD 284
           SA   QS YA+ RR+RINERLRILQ L+PNGTKVDISTMLEEA+QYVKFL LQIKLLSSD
Sbjct: 114 SAESSQSYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLSSD 173

Query: 285 DLWMYAPIAYNGMDIGLNR 304
           ++WMYAP+A+   D G NR
Sbjct: 174 EMWMYAPLAF---DSGNNR 189

[Close]

BLAST of Lcy08g001420 vs. ExPASy TrEMBL
Match: A0A6J1GNG8 (transcription factor bHLH85-like OS=Cucurbita moschata OX=3662 GN=LOC111455548 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 2.3e-91
Identity = 227/329 (69.00%), Postives = 245/329 (74.47%), Query Frame = 0


Query: 1   MEQLNGPI--GDGEWSSLSGNFIADEEEEANFMAQLFNSTTAPDKPPFMAAL-DLHQ--- 60
           M  L  P   GD +WSSL+G F AD EEEA F+AQLF     PD  PFMA L DLHQ   
Sbjct: 1   MAHLTAPTAEGDDQWSSLNGAFTAD-EEEATFVAQLF---APPD--PFMANLHDLHQPPC 60

Query: 61  -LASSSSSY--SSSSSFYN--NYCSQLLFP-TENDS--YYCNPM--MSFCLGELGINNNG 120
             AS SS Y  S  SS ++  +YCSQLLF  +EN+   YYCNPM    F LGELG NNNG
Sbjct: 61  EPASCSSFYRVSQESSEFSGGSYCSQLLFSGSENNDNYYYCNPMDNHDFSLGELG-NNNG 120

Query: 121 G----EDEDSMNLESNLRPFSEAELTKLPEEEAAIDDQLEINCKKRSRGSGDVQKRRNER 180
           G    + EDSMN+E+            +  EE    +  +INCKKRSRG GD+QKRRNE+
Sbjct: 121 GFQLEDHEDSMNIEA------------VVGEEGG--NPRDINCKKRSRGFGDLQKRRNEK 180

Query: 181 SKKTQKLTSSTNTEEDGNNAGHNRQSTSSYCSEDESNASLELNGGANNSGSSPKGPTKSR 240
           SKKTQKL     TEEDGNNA HNRQSTSSYCSEDESNASLELNGG NNSG SP GPTKSR
Sbjct: 181 SKKTQKLI----TEEDGNNAAHNRQSTSSYCSEDESNASLELNGGVNNSGPSPNGPTKSR 240

Query: 241 ASRGSATDPQSLYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKL 300
           ASRGSATDPQSLYAR+RRERINERL+ILQ LVPNGTKVDISTMLEEAVQYVKFLQLQIKL
Sbjct: 241 ASRGSATDPQSLYARKRRERINERLKILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKL 300

Query: 301 LSSDDLWMYAPIAYNGMDIGLNRTPNTRK 310
           LSSDDLWMYAPIAYNGMDIGLN TPNT K
Sbjct: 301 LSSDDLWMYAPIAYNGMDIGLNPTPNTPK 304

[Close]

BLAST of Lcy08g001420 vs. ExPASy TrEMBL
Match: A0A1S3C161 (transcription factor bHLH54 OS=Cucumis melo OX=3656 GN=LOC103495305 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 5.8e-87
Identity = 228/337 (67.66%), Postives = 247/337 (73.29%), Query Frame = 0


Query: 16  LSGNFIA-------DEEEEANFMAQLFNSTTAPDKP-PFMAALDLHQLASSSSSYSSSSS 75
           L+G+FIA       +EEEEA FMAQL  +T A   P PFMA L   Q  SSS+ YS S  
Sbjct: 4   LNGSFIANHEEEDHEEEEEATFMAQLLFNTKANSPPDPFMATLSYDQTPSSSTFYSLS-- 63

Query: 76  FYNNYCSQLLFPT-ENDS------YYCNPMMS--------FCLGELG--INNNGGED--- 135
                  +LLFPT EN++      YYCNPM +        F LGELG   NNN G +   
Sbjct: 64  --QESSDELLFPTNENNNNHHHHYYYCNPMNNNNDNSSNYFSLGELGNYYNNNNGSNFHL 123

Query: 136 ---EDSMNLE----SNLRP-FSEA-ELTKLPEEEAAIDDQLEINCKKRSRGS-GD--VQK 195
              EDSMN+E    ++L+P F EA +L KLPEEEAA   Q EINCKKRSRG  GD  VQK
Sbjct: 124 QVPEDSMNVEVSENNSLQPCFEEADQLIKLPEEEAA-HYQTEINCKKRSRGEFGDHHVQK 183

Query: 196 RRNERSKKTQKLTSSTNTEEDGNNAGHNRQSTSSYCSEDESNASLELNGGAN-NSGSSPK 255
            RNER KKTQKLTSSTNTEEDG N G +RQSTS+YCSEDESNASL+ NGGAN NSGSS  
Sbjct: 184 GRNERGKKTQKLTSSTNTEEDG-NGGLSRQSTSTYCSEDESNASLDRNGGANYNSGSSLN 243

Query: 256 GPTKSRASRGSATDPQSLYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFL 311
           GP KSRASRGSATDPQSLYAR+RRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFL
Sbjct: 244 GPNKSRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFL 303

[Close]

BLAST of Lcy08g001420 vs. ExPASy TrEMBL
Match: A0A0A0K6C1 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071410 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 6.5e-86
Identity = 217/326 (66.56%), Postives = 238/326 (73.01%), Query Frame = 0


Query: 16  LSGNFIA------DEEEEANFMAQLFNSTTAPDKP-PFMAALDLHQLASSSS-SYSSSSS 75
           ++G+FIA      +EEEEA FMAQL  +T A   P PFMA L   Q  SSS+ +YS S  
Sbjct: 5   INGSFIANHEDQEEEEEEATFMAQLLFNTKANSPPDPFMATLSYDQTPSSSTFNYSLS-- 64

Query: 76  FYNNYCSQLLFPTENDSYYCNPMMS--------FCLGELGI---NNNGGE-----DEDSM 135
                  ++LFP  N  YY NPM +        F LGELG    N+NG +      EDSM
Sbjct: 65  --QESSDEILFPNNNHYYYSNPMNNNNSNSSNYFSLGELGTYYSNDNGSDFHVQVPEDSM 124

Query: 136 NL---ESNLRP-FSEAELTKLPEEEAAIDDQLEINCKKRSRGS-GD-VQKRRNERSKKTQ 195
           N+   E+NL+P F EAEL KLPEEEAA     +INCKKRSRG  GD VQK RNERSKK Q
Sbjct: 125 NVEVSENNLQPCFEEAELIKLPEEEAAHYHIDQINCKKRSRGEFGDHVQKGRNERSKKAQ 184

Query: 196 KLTSSTNTEEDGNNAGHNRQSTSSYCSEDESNASLELNGGANNSGSSPKGPTKSRASRGS 255
           KLTSSTNT E+  NAG +RQSTS+YCSEDESNASL+ NGGANNS SS  G  KSRASRGS
Sbjct: 185 KLTSSTNTTEEDGNAGLSRQSTSTYCSEDESNASLDQNGGANNSRSSLNGANKSRASRGS 244

Query: 256 ATDPQSLYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDD 311
           ATDPQSLYAR+RRERINERLRILQ LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDD
Sbjct: 245 ATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDD 304

[Close]

BLAST of Lcy08g001420 vs. ExPASy TrEMBL
Match: A0A6J1D6L1 (transcription factor bHLH84 OS=Momordica charantia OX=3673 GN=LOC111017406 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 7.1e-85
Identity = 212/327 (64.83%), Postives = 236/327 (72.17%), Query Frame = 0


Query: 1   MEQLNGPIGDGEWSSLSGNFIADEEEEANFMAQLFNSTTAPDKPPFMAA----------L 60
           MEQL G I +GEWSSLSG   A   EEA FMAQL N    P  PP +AA           
Sbjct: 1   MEQLTGAIAEGEWSSLSGTCTA---EEAAFMAQLLN----PPPPPLIAAHHHESASYCSP 60

Query: 61  DLHQLASSSSSYSSSSSFYNNYCSQLLFPTENDSYYCNPMMSFCLGELGINNNGG---ED 120
             ++L+  SS +S  S    + CS LLFPTEN+ Y         +G+ G  NNGG   ED
Sbjct: 61  SFYRLSQESSEFSGGS---QSQCSHLLFPTENNCY---------IGDFG--NNGGFHLED 120

Query: 121 EDSMNLESNLRPFSEAELTKLP---EEEAAIDDQLEINCKKRSRGSGDVQKRRNERSKKT 180
           ED      NL+ + E ELT L    EEE     QLE N KKRS GSG+VQKRRNERSKKT
Sbjct: 121 ED-----CNLQGYCEPELTNLEAAMEEEEHNQLQLE-NSKKRSWGSGEVQKRRNERSKKT 180

Query: 181 QKLTSSTNTEEDGNNAGHNRQSTSSYCSEDESNASLELNGGANNSGSSPKGPTKSRASRG 240
           QKLTS++N+E+   NAG +RQSTS+YCSEDESNAS E NGGANNS SSPKGPTKSRASRG
Sbjct: 181 QKLTSNSNSED--GNAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRG 240

Query: 241 SATDPQSLYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSD 300
           SATDPQSLYAR+RRERINERL+ILQ+LVPNGTKVDISTMLEEAVQYVKFL+LQIKLLSSD
Sbjct: 241 SATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLRLQIKLLSSD 298

Query: 301 DLWMYAPIAYNGMDIGLNRTPNTRKES 312
           DLWMYAPIAYNGMD+ LN TP T KES
Sbjct: 301 DLWMYAPIAYNGMDLRLNPTPITPKES 298

[Close]

BLAST of Lcy08g001420 vs. ExPASy TrEMBL
Match: A0A6J1EIT4 (transcription factor bHLH139-like OS=Cucurbita moschata OX=3662 GN=LOC111434543 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 7.1e-85
Identity = 202/287 (70.38%), Postives = 220/287 (76.66%), Query Frame = 0


Query: 31  MAQLFNSTTAPDKPPFMAALDLHQLASSSSSYSSSSSFYNNYCSQLLFPTENDSYYCNPM 90
           MAQLFNS TAPD  PFMAALDLH                NNYC+                
Sbjct: 1   MAQLFNS-TAPD--PFMAALDLH----------------NNYCNS--------------- 60

Query: 91  MSFCLGELGINNNGG---EDEDSMNLESNLRPFSEAELTKLPEEEAAIDD----QLEINC 150
           M+FCLGELG +NNGG   E+ED     SNL+   EAEL KLPEEEAA++     QLEINC
Sbjct: 61  MNFCLGELGNDNNGGFNLEEED-----SNLQSCYEAELMKLPEEEAAMEQKRHTQLEINC 120

Query: 151 KKRSRGSGDVQKRRNERSKKTQKLTSSTNTEEDGNNAGHNRQSTSSYCSEDESNASLELN 210
           KKRSRGS DV+K+ NERSKKTQKLTSS+NTEE+G NA H++QSTS+YCSEDES AS EL 
Sbjct: 121 KKRSRGSRDVEKKWNERSKKTQKLTSSSNTEENG-NAVHSKQSTSNYCSEDESKASFEL- 180

Query: 211 GGANNSGSSPKGPTKSRASRGSATDPQSLYARRRRERINERLRILQNLVPNGTKVDISTM 270
              NNS S+PK  TK+RASRGSATDPQSLYARRRRERINERL+ILQNLVPNGTKVDISTM
Sbjct: 181 ---NNSRSNPKETTKTRASRGSATDPQSLYARRRRERINERLKILQNLVPNGTKVDISTM 240

Query: 271 LEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNRTPNTRKE 311
           LEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNR+PNT KE
Sbjct: 241 LEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNRSPNTSKE 243

[Close]

BLAST of Lcy08g001420 vs. NCBI nr
Match: KAG7022499.1 (Transcription factor bHLH85, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350.9 bits (899), Expect = 1.1e-92
Identity = 225/320 (70.31%), Postives = 240/320 (75.00%), Query Frame = 0


Query: 1   MEQLNGPI---GDGEWSSLSGNFIADEEEEANFMAQLFNSTTAPDKPPFMAALDLHQLAS 60
           MEQL GPI   GD +WS L+G F AD EE A FMAQLFNS TAPD  PFMAALDLH    
Sbjct: 1   MEQLRGPIVEDGD-QWSCLNGVFTAD-EEAATFMAQLFNS-TAPD--PFMAALDLH---- 60

Query: 61  SSSSYSSSSSFYNNYCSQLLFPTENDSYYCNPMMSFCLGELGINNNGG---EDEDSMNLE 120
                       NN              YCNP+ S CLGELG +NNGG   E+ED     
Sbjct: 61  ------------NN--------------YCNPINS-CLGELGNDNNGGFNLEEED----- 120

Query: 121 SNLRPFSEAELTKLPEEEAAIDD----QLEINCKKRSRGSGDVQKRRNERSKKTQKLTSS 180
           SNL+   EAEL KLPEEEAA+D     QLEINCKKRSRGS DV+K+ NERSKK QKLTSS
Sbjct: 121 SNLQACYEAELMKLPEEEAAMDQKRHTQLEINCKKRSRGSRDVEKKWNERSKKPQKLTSS 180

Query: 181 TNTEEDGNNAGHNRQSTSSYCSEDESNASLELNGGANNSGSSPKGPTKSRASRGSATDPQ 240
            NTEEDG N  H++QSTS+YCSEDESNAS EL    NNS S+PK  TK+RASRGSATDPQ
Sbjct: 181 NNTEEDG-NVVHSKQSTSNYCSEDESNASFEL----NNSRSNPKETTKTRASRGSATDPQ 240

Query: 241 SLYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYA 300
           SLYARRRRERINERL+ILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYA
Sbjct: 241 SLYARRRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYA 274

Query: 301 PIAYNGMDIGLNRTPNTRKE 311
           PIAYNGMDIGLNRTPNT KE
Sbjct: 301 PIAYNGMDIGLNRTPNTSKE 274

[Close]

BLAST of Lcy08g001420 vs. NCBI nr
Match: KAG6588712.1 (Transcription factor basic helix-loop-helix 85, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 349.7 bits (896), Expect = 2.5e-92
Identity = 224/320 (70.00%), Postives = 240/320 (75.00%), Query Frame = 0


Query: 1   MEQLNGPI---GDGEWSSLSGNFIADEEEEANFMAQLFNSTTAPDKPPFMAALDLHQLAS 60
           MEQL GPI   GD +WS L+G F AD EE A FMAQLFNS TAPD  PFMAALDLH    
Sbjct: 1   MEQLRGPIVEDGD-QWSCLNGVFTAD-EEAATFMAQLFNS-TAPD--PFMAALDLH---- 60

Query: 61  SSSSYSSSSSFYNNYCSQLLFPTENDSYYCNPMMSFCLGELGINNNGG---EDEDSMNLE 120
                       NN              YCNP+ S CLGELG +NNGG   E+ED     
Sbjct: 61  ------------NN--------------YCNPINS-CLGELGNDNNGGFNLEEED----- 120

Query: 121 SNLRPFSEAELTKLPEEEAAIDD----QLEINCKKRSRGSGDVQKRRNERSKKTQKLTSS 180
           SNL+   EAEL KLPEEEAA+D     QLEINCKKRSRGS DV+K+ NERSKK QKLTSS
Sbjct: 121 SNLQACYEAELMKLPEEEAAMDQKRHTQLEINCKKRSRGSRDVEKKWNERSKKPQKLTSS 180

Query: 181 TNTEEDGNNAGHNRQSTSSYCSEDESNASLELNGGANNSGSSPKGPTKSRASRGSATDPQ 240
            NTEEDG N  H++QSTS+YCSEDESNAS EL    NNS S+PK  TK+RASRGSATDPQ
Sbjct: 181 NNTEEDG-NVVHSKQSTSNYCSEDESNASFEL----NNSRSNPKETTKTRASRGSATDPQ 240

Query: 241 SLYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYA 300
           SLYAR+RRERINERL+ILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYA
Sbjct: 241 SLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYA 274

Query: 301 PIAYNGMDIGLNRTPNTRKE 311
           PIAYNGMDIGLNRTPNT KE
Sbjct: 301 PIAYNGMDIGLNRTPNTSKE 274

[Close]

BLAST of Lcy08g001420 vs. NCBI nr
Match: XP_023511608.1 (transcription factor bHLH85-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347.4 bits (890), Expect = 1.2e-91
Identity = 226/329 (68.69%), Postives = 243/329 (73.86%), Query Frame = 0


Query: 1   MEQLNGPI--GDGEWSSLSGNFIADEEEEANFMAQLFNSTTAPDKPPFMAAL-DLHQ--- 60
           M  L  PI  GD +WSSL+G F AD EEEA F+AQLF     PD  PFMA L DLHQ   
Sbjct: 1   MAHLTAPIAEGDDQWSSLNGAFTAD-EEEATFVAQLF---APPD--PFMANLHDLHQPPC 60

Query: 61  -LASSSSSY--SSSSSFYN--NYCSQLLF---PTENDSYYCNPM--MSFCLGELGINNNG 120
             AS SS Y  S  SS ++  +YCSQLLF    + +  YYCNPM    F LGELG NNNG
Sbjct: 61  EPASCSSFYRVSQESSEFSGGSYCSQLLFSGSESNDHYYYCNPMDNHDFSLGELGSNNNG 120

Query: 121 G----EDEDSMNLESNLRPFSEAELTKLPEEEAAIDDQLEINCKKRSRGSGDVQKRRNER 180
           G    + EDSMN+E+            +  EE    + L+IN KKRSRG GD+QKRRNE+
Sbjct: 121 GFHLEDHEDSMNIEA------------VVGEEGG--NPLDINAKKRSRGFGDLQKRRNEK 180

Query: 181 SKKTQKLTSSTNTEEDGNNAGHNRQSTSSYCSEDESNASLELNGGANNSGSSPKGPTKSR 240
           SKKTQKL     TEEDGNNA HNRQSTSSYCSEDESNASLELNGG NNSG SP  PTKSR
Sbjct: 181 SKKTQKLI----TEEDGNNAAHNRQSTSSYCSEDESNASLELNGGVNNSGPSPNRPTKSR 240

Query: 241 ASRGSATDPQSLYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKL 300
           ASRGSATDPQSLYARRRRERINERL+ILQ LVPNGTKVDISTMLEEAVQYVKFLQLQIKL
Sbjct: 241 ASRGSATDPQSLYARRRRERINERLKILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKL 300

Query: 301 LSSDDLWMYAPIAYNGMDIGLNRTPNTRK 310
           LSSDDLWMYAPIAYNGMDIGLN TPNT K
Sbjct: 301 LSSDDLWMYAPIAYNGMDIGLNPTPNTPK 305

[Close]

BLAST of Lcy08g001420 vs. NCBI nr
Match: XP_022953029.1 (transcription factor bHLH85-like [Cucurbita moschata])

HSP 1 Score: 345.5 bits (885), Expect = 4.7e-91
Identity = 227/329 (69.00%), Postives = 245/329 (74.47%), Query Frame = 0


Query: 1   MEQLNGPI--GDGEWSSLSGNFIADEEEEANFMAQLFNSTTAPDKPPFMAAL-DLHQ--- 60
           M  L  P   GD +WSSL+G F AD EEEA F+AQLF     PD  PFMA L DLHQ   
Sbjct: 1   MAHLTAPTAEGDDQWSSLNGAFTAD-EEEATFVAQLF---APPD--PFMANLHDLHQPPC 60

Query: 61  -LASSSSSY--SSSSSFYN--NYCSQLLFP-TENDS--YYCNPM--MSFCLGELGINNNG 120
             AS SS Y  S  SS ++  +YCSQLLF  +EN+   YYCNPM    F LGELG NNNG
Sbjct: 61  EPASCSSFYRVSQESSEFSGGSYCSQLLFSGSENNDNYYYCNPMDNHDFSLGELG-NNNG 120

Query: 121 G----EDEDSMNLESNLRPFSEAELTKLPEEEAAIDDQLEINCKKRSRGSGDVQKRRNER 180
           G    + EDSMN+E+            +  EE    +  +INCKKRSRG GD+QKRRNE+
Sbjct: 121 GFQLEDHEDSMNIEA------------VVGEEGG--NPRDINCKKRSRGFGDLQKRRNEK 180

Query: 181 SKKTQKLTSSTNTEEDGNNAGHNRQSTSSYCSEDESNASLELNGGANNSGSSPKGPTKSR 240
           SKKTQKL     TEEDGNNA HNRQSTSSYCSEDESNASLELNGG NNSG SP GPTKSR
Sbjct: 181 SKKTQKLI----TEEDGNNAAHNRQSTSSYCSEDESNASLELNGGVNNSGPSPNGPTKSR 240

Query: 241 ASRGSATDPQSLYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKL 300
           ASRGSATDPQSLYAR+RRERINERL+ILQ LVPNGTKVDISTMLEEAVQYVKFLQLQIKL
Sbjct: 241 ASRGSATDPQSLYARKRRERINERLKILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKL 300

Query: 301 LSSDDLWMYAPIAYNGMDIGLNRTPNTRK 310
           LSSDDLWMYAPIAYNGMDIGLN TPNT K
Sbjct: 301 LSSDDLWMYAPIAYNGMDIGLNPTPNTPK 304

[Close]

BLAST of Lcy08g001420 vs. NCBI nr
Match: XP_023530173.1 (transcription factor bHLH54-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.7 bits (883), Expect = 8.1e-91
Identity = 224/321 (69.78%), Postives = 240/321 (74.77%), Query Frame = 0


Query: 1   MEQLNGPI---GDGEWSSLSGNFIADEEEEANFMAQLFNSTTAPDKPPFMAALDLHQLAS 60
           MEQL GPI   GD +WSSL+G F AD EE A FMAQLFNS TAPD  PFMAALDLH    
Sbjct: 1   MEQLRGPIVEDGD-QWSSLNGVFTAD-EEAATFMAQLFNS-TAPD--PFMAALDLH---- 60

Query: 61  SSSSYSSSSSFYNNYCSQLLFPTENDSYYCNPMMSFCLGELGINNNGG---EDEDSMNLE 120
                       NN              YCNP M+FCLGELG ++NGG   E+ED     
Sbjct: 61  ------------NN--------------YCNP-MNFCLGELGNDHNGGFNLEEED----- 120

Query: 121 SNLRPFSEAELTKLPEEEAAIDD----QLEINCKKRSRGSGDVQ-KRRNERSKKTQKLTS 180
            NL+   EAE  KLPEEEAA++     QLEINCKKRSRGS DV  ++ NERSKKTQKLTS
Sbjct: 121 YNLQACYEAEFMKLPEEEAAMEQKRHTQLEINCKKRSRGSRDVSVEKWNERSKKTQKLTS 180

Query: 181 STNTEEDGNNAGHNRQSTSSYCSEDESNASLELNGGANNSGSSPKGPTKSRASRGSATDP 240
           S NTEEDG NA H++QSTSSYCSEDESNAS EL    NNS S+PK   K+RASRGSATDP
Sbjct: 181 SNNTEEDG-NAVHSKQSTSSYCSEDESNASFEL----NNSRSNPKETAKTRASRGSATDP 240

Query: 241 QSLYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMY 300
           QSLYARRRRERINERL+ILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMY
Sbjct: 241 QSLYARRRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMY 275

Query: 301 APIAYNGMDIGLNRTPNTRKE 311
           APIAYNGMDIGLNRTPNT KE
Sbjct: 301 APIAYNGMDIGLNRTPNTSKE 275

[Close]

BLAST of Lcy08g001420 vs. TAIR 10
Match: AT4G33880.1 (ROOT HAIR DEFECTIVE 6-LIKE 2 )

HSP 1 Score: 175.6 bits (444), Expect = 6.0e-44
Identity = 149/349 (42.69%), Postives = 198/349 (56.73%), Query Frame = 0


Query: 11  GEWSSLSGNFIADEEEEANFMAQLFNSTTAP--DKPPFMAALDLHQ-------------- 70
           GEWS+  G       EEA+FM QL  S   P        AA   HQ              
Sbjct: 5   GEWSNNLGGMYTYATEEADFMNQLLASYDHPGTGSSSGAAASGDHQGLYWNLGSHHNHLS 64

Query: 71  LASSSSSY-----SSSSSFYNNYCSQLLFPTENDSYYCNPMMSFCLGELGINNNG---GE 130
           L S + S+     SSS S  N+    ++ PT  ++   N  M F + ++ IN N    GE
Sbjct: 65  LVSEAGSFCFSQESSSYSAGNSGYYTVVPPTVEENQ--NETMDFGMEDVTINTNSYLVGE 124

Query: 131 DEDSMNLE-----SNLRPFSEAELTKLPEEEAAIDDQLEI-------NCKKRSRGSGDVQ 190
           +    ++E       L P  E  +    +EE+ +  ++ +         KKRSR +   +
Sbjct: 125 ETSECDVEKYSSGKTLMPL-ETVVENHDDEESLLQSEISVTTTKSLTGSKKRSRATSTDK 184

Query: 191 KRR---NERSKKTQKLTSSTN--TEEDG--------NNAGHNRQ-STSSYCSEDESNASL 250
            +R   N+R++K  +++   N   EE+G        N A  +RQ S++++C+E+ESN + 
Sbjct: 185 NKRARVNKRAQKNVEMSGDNNEGEEEEGETKLKKRKNGAMMSRQNSSTTFCTEEESNCA- 244

Query: 251 ELNGGANNSGSSPKGPT-------KSRASRGSATDPQSLYARRRRERINERLRILQNLVP 303
           + +GG  +S S    P+       K+RASRG+ATDPQSLYAR+RRERINERLRILQNLVP
Sbjct: 245 DQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVP 304

[Close]

BLAST of Lcy08g001420 vs. TAIR 10
Match: AT2G14760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 158.7 bits (400), Expect = 7.7e-39
Identity = 140/339 (41.30%), Postives = 180/339 (53.10%), Query Frame = 0


Query: 11  GEWSSLSGNFIADEEEEANFMAQLFNSTTAPDKPPFMAALDLHQLASSSSSYSSSSSFYN 70
           GEWS+  G       EEA+FM QL  S   P                SSS  +++ + Y+
Sbjct: 5   GEWSTGLGGIYT---EEADFMNQLLASYEQP-------------CGGSSSETTATLTAYH 64

Query: 71  NYCSQ----LLFPTENDSY--YCNPMMSFCLGELGINNNGGEDED-SMNLESNLRPFSEA 130
           +  SQ      F  E+ SY  YC  M          +NNG ED   + NL       SE 
Sbjct: 65  HQGSQWNGGFCFSQESSSYSGYCAAM-----PRQEEDNNGMEDATINTNLYLVGEETSEC 124

Query: 131 ELTK------LPEEEAA-----------------IDDQLEINC---KKRSRGSGDVQKRR 190
           + T+      LP E  A                  D+++   C   KKR+R +   + +R
Sbjct: 125 DATEYSGKSLLPLETVAENHDHSMLQPENSLTTTTDEKMFNQCESSKKRTRATTTDKNKR 184

Query: 191 NERSKKTQKLTSSTNTEEDGNNAGHNRQST-----------SSYCSEDESNAS---LELN 250
             +++++QK    +   E+     +  ++             + CS+DESN     L   
Sbjct: 185 ANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKTCCSDDESNGGDTFLSKE 244

Query: 251 GGANNSGSSPKGPTKSRASRGSATDPQSLYARRRRERINERLRILQNLVPNGTKVDISTM 303
            G ++   +  G  K+RASRG+ATDPQSLYAR+RRERINERLRILQ+LVPNGTKVDISTM
Sbjct: 245 DGEDSKALNLNG--KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTM 304

[Close]

BLAST of Lcy08g001420 vs. TAIR 10
Match: AT1G27740.1 (root hair defective 6-like 4 )

HSP 1 Score: 150.2 bits (378), Expect = 2.7e-36
Identity = 92/164 (56.10%), Postives = 122/164 (74.39%), Query Frame = 0


Query: 139 LEINCKKRSRGSGDVQKRRNERSKKTQKLTSSTNTEEDGNNAGHNRQSTSSYCSEDESNA 198
           L++    ++  + DV ++   +SKK Q+++S +NT ++ N    + QS S+  S D+  A
Sbjct: 101 LDVENLCKTNSNCDVTRQELAKSKKKQRVSSESNTVDESNTNWVDGQSLSN--SSDDEKA 160

Query: 199 SLELNGGANNSGSSPKGPTKSRASRGSATDPQSLYARRRRERINERLRILQNLVPNGTKV 258
           S+          +S KG  K+RA++G+ATDPQSLYAR+RRE+INERL+ LQNLVPNGTKV
Sbjct: 161 SV----------TSVKG--KTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV 220

Query: 259 DISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 303
           DISTMLEEAV YVKFLQLQIKLLSSDDLWMYAP+AYNG+D+G +
Sbjct: 221 DISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPLAYNGLDMGFH 250

[Close]

BLAST of Lcy08g001420 vs. TAIR 10
Match: AT2G14760.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 149.4 bits (376), Expect = 4.6e-36
Identity = 140/352 (39.77%), Postives = 180/352 (51.14%), Query Frame = 0


Query: 11  GEWSSLSGNFIADEEEEANFMAQLFNSTTAPDKPPFMAALDLHQLASSSSSYSSSSSFYN 70
           GEWS+  G       EEA+FM QL  S   P                SSS  +++ + Y+
Sbjct: 5   GEWSTGLGGIYT---EEADFMNQLLASYEQP-------------CGGSSSETTATLTAYH 64

Query: 71  NYCSQ----LLFPTENDSY--YCNPMMSFCLGELGINNNGGEDED-SMNLESNLRPFSEA 130
           +  SQ      F  E+ SY  YC  M          +NNG ED   + NL       SE 
Sbjct: 65  HQGSQWNGGFCFSQESSSYSGYCAAM-----PRQEEDNNGMEDATINTNLYLVGEETSEC 124

Query: 131 ELTK------LPEEEAA-----------------IDDQLEINC---KKRSRGSGDVQKRR 190
           + T+      LP E  A                  D+++   C   KKR+R +   + +R
Sbjct: 125 DATEYSGKSLLPLETVAENHDHSMLQPENSLTTTTDEKMFNQCESSKKRTRATTTDKNKR 184

Query: 191 NERSKKTQKLTSSTNTEEDGNNAGHNRQST-----------SSYCSEDESNAS---LELN 250
             +++++QK    +   E+     +  ++             + CS+DESN     L   
Sbjct: 185 ANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKTCCSDDESNGGDTFLSKE 244

Query: 251 GGANNSGSSPKGPTKSRASRGSATDPQSLYAR-------------RRRERINERLRILQN 303
            G ++   +  G  K+RASRG+ATDPQSLYAR             +RRERINERLRILQ+
Sbjct: 245 DGEDSKALNLNG--KTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQH 304

[Close]

BLAST of Lcy08g001420 vs. TAIR 10
Match: AT5G43175.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.8e-32
Identity = 101/226 (44.69%), Postives = 135/226 (59.73%), Query Frame = 0


Query: 81  ENDSYYCNPMMSFCLGELGINNNGGEDEDSMNLESNLRPFSEAEL----TKLPEEEAAID 140
           EN+++    + S  LG    +     +    N  +    FS  +     T L    AA+ 
Sbjct: 2   ENEAFVDGELESL-LGMFNFDQCSSNESSFCNAPNETDVFSSDDFFPFGTILQSNYAAVL 61

Query: 141 DQLEINCKKRSRGSGDVQKRRNERSKKTQKLTSSTNTEEDGNNAGHNRQSTSSYCSEDES 200
           D       +      D+ K R     K QKL+S +N   +   A  + QS SSY S D+ 
Sbjct: 62  DGSNHQTNRNVDSRQDLLKPR-----KKQKLSSESNLVTEPKTAWRDGQSLSSYNSSDDE 121

Query: 201 NASLELNGGANNSGSSPKGPTKSRASRGSATDPQSLYARRRRERINERLRILQNLVPNGT 260
            A     G  +N+  S K   K++A+RG A+DPQSLYAR+RRERIN+RL+ LQ+LVPNGT
Sbjct: 122 KAL----GLVSNTSKSLK--RKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGT 181

Query: 261 KVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 303
           KVDISTMLE+AV YVKFLQLQIKLLSS+DLWMYAP+A+NG+++GL+
Sbjct: 182 KVDISTMLEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNMGLH 215

The following BLAST results are available for this feature:

BLAST of Lcy08g001420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WK0	8.5e-43	42.69	Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1	[more]
Q7XHI9	1.1e-37	41.30	Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1	[more]
Q8LEG1	3.8e-35	56.10	Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1	[more]
Q3E7L7	2.6e-31	44.69	Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=...	[more]
Q2QQ32	1.4e-24	74.68	Transcription factor BHLH133 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH133...	[more]

BLAST of Lcy08g001420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GNG8	2.3e-91	69.00	transcription factor bHLH85-like OS=Cucurbita moschata OX=3662 GN=LOC111455548 P...	[more]
A0A1S3C161	5.8e-87	67.66	transcription factor bHLH54 OS=Cucumis melo OX=3656 GN=LOC103495305 PE=4 SV=1	[more]
A0A0A0K6C1	6.5e-86	66.56	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071410 PE=4 S...	[more]
A0A6J1D6L1	7.1e-85	64.83	transcription factor bHLH84 OS=Momordica charantia OX=3673 GN=LOC111017406 PE=4 ...	[more]
A0A6J1EIT4	7.1e-85	70.38	transcription factor bHLH139-like OS=Cucurbita moschata OX=3662 GN=LOC111434543 ...	[more]

BLAST of Lcy08g001420 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022499.1	1.1e-92	70.31	Transcription factor bHLH85, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6588712.1	2.5e-92	70.00	Transcription factor basic helix-loop-helix 85, partial [Cucurbita argyrosperma ...	[more]
XP_023511608.1	1.2e-91	68.69	transcription factor bHLH85-like [Cucurbita pepo subsp. pepo]	[more]
XP_022953029.1	4.7e-91	69.00	transcription factor bHLH85-like [Cucurbita moschata]	[more]
XP_023530173.1	8.1e-91	69.78	transcription factor bHLH54-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy08g001420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33880.1	6.0e-44	42.69	ROOT HAIR DEFECTIVE 6-LIKE 2	[more]
AT2G14760.1	7.7e-39	41.30	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27740.1	2.7e-36	56.10	root hair defective 6-like 4	[more]
AT2G14760.3	4.6e-36	39.77	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G43175.1	1.8e-32	44.69	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 231..280 e-value: 3.0E-11 score: 53.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 235..275 e-value: 6.7E-9 score: 35.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 225..274 score: 15.357671
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 224..282 e-value: 5.5E-12 score: 47.4
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 225..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..159
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 116..306
None	No IPR available	PANTHER	PTHR16223:SF219	TRANSCRIPTION FACTOR BHLH139-LIKE	coord: 116..306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g001420.1	Lcy08g001420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity