Lcy07g018230 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g018230
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Gibberellin regulated protein
Location	Chr07: 46850291 .. 46852453 (-)
RNA-Seq Expression	Lcy07g018230
Synteny	Lcy07g018230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCCCCTTTGAAGCAAACCACATGGCTAAAGTTTCCAGCTTCCTCCTTCTGTGGCTTGCTCTTATGTTTCTTTTCTTCACACATAATCAGGTAATTTAGGCCCCGTTTGATAACCATTTGGTTTTTGAAAATTATGCTTGTTTTCTCCTAATTTCTTTATCATGGTTTTCATCTTTGTGAAAGATACATTGGAATTCTAAGCCAAATTTCAAAAACAAAAACAAGTTTTTGAAAACTACTTTTTTTTGTTTTCAAAACTTGAGTTGGTTTTTGAAAATATGGAAAGAATGGAAGTACAAAACAAAGAAACTTATGAGAAAAAGTAGTGTTTGTAGGCTTAATTTTCAAAAACCAAAAACAAAAAACAAAATGGTTATCAAACGGGGCCTTACTTTTTAATTTCGTCTATAATTCTTTTTAGTTATTTTCTTAAAATTTTCACTGGCAAATTCACATCAAATTTCGAGCGGCAGTTAAAAAATGGGATAAAATTAAAATATTTGAATATAACAACTAGCTATATTTTTTTCTTCTATAAATTGATTGATTTTTAAAATATCAATTATACCTTCCATCTTTGGTTGGTCAGCCATTTTAACAACAAATAATTATCATAATTTATTGGATAAGATACTCATTACTATCTTAAAAATAGATGATTCAATCATTCCGTTAACAACTGCTTAACTAAAAAAAGAAAACTCGACTAATATATGACTTCAACTTTTATGCTCAAAATGAGCCTAGTTTAATGGTAATTGGCATGTTTCCTTGACCAAAAGGTTAATGGTTCGCATCCTCTCTCCTCAAATGGTATTTTAAGACCTCGTTTGATAACTATGTAGTTTTTGGTTTTTTTTTTCCTAATTATGTTGTTTTCTCGAGATTTTCTTTCTAGTGTTTTTCATCTTCGGACTCAATTACATTCCCAACCAAATTTCAAAAAAAAAAAAAAAAAAAAATTTTAAGATACATTTTTTTTTTAGTTTTCAAAACTTATATAGTTTTTAAAAACATAAACGGACCTAAATAATTGAGGCATGTAAATAAAACTTATTTTTTTATCTCAAAATAATAAGGCTAAATTATTAAAAAAAAATGTCCCTGAACTTTAAAAAGTTTCAAAAATATACCTGAACCTTAAAAAATGTTTCAAAAATACGTTTGTCGTTAATTTTTTTTTATGGAAACCATTTTTTAAACGTTTGGTAAAGTTCATGAGTATTTTTTAAACTTTTTAAAGTTCAGAGACATTTTTTTAAACAAACCACATAGTTCAGGAATATTTTTTATAATTTAACCAAATAATAATAATAATAATAAAACTTATTTTTCATAAACCAAAAATCAAATAAACGGAGCTAAATAATTGAGACATGTTAATAAAACTGGACTGGCGGCAAGCAATAATGGCCCAATTTCCTGTCCCGCAGGCCGCCTCTACCATGAAAACGGCGGCGGCAGTGTCGTCGCAGCTGTACGGCGCCACCCAAGGCAGCCTCCGTCCGCAAGGTAAGCCAAAGCCCCACATTTTCTTTTACCTTTTTCCTGTCCAGTCAGAAGCACAAGCTTAAACTCTATGCATTTTTGTTTTGGCCGTCTGCATCGGCGGCGACGGCGGCGATTTCAGAATGCGGTGGGCGGTGCACGGCGCGATGCTCGGCGACGTCGTTCAAGAAGCCGTGTATGGTATTCTGCAGAAAGTGCTGTGCGAAGTGCTTGTGCGTTCCTCCGGGTACCTACGGGAACAAGCAGATGTGCCCTTGCTATAACAATTGGAAGACCAAGCGCGGTGGCCCAAAATGCCCTTGATTTTATCACTAATTTTCAATTTATTATCGAAGGCGTTAATAATATATATGATGTCATAATTGACATGAATTTCGTGGTTGCGTTTTTTCATTCCGTTATAATTTTGGATCATATTCTCGAACTTTCAATTTTACAAAATTCTATAATCAAGTTCTCGTGTTGCAAAACATATAAAACAACGAATTATAAAATTGTCGCAGTTTAACTCGTTGTTTTAACTCTATAAATTTTAAAATTGTTGCAATTTAATGTATTTTTTAAATTCTATATAATTTGAAATTGTGATATTGGTGGTTAAAGGAATTAGTTCTAGGTTGCTGTTGAGCGGCATGGATTTAAGAAAACAAAAA

mRNA sequence

ACTCCCCTTTGAAGCAAACCACATGGCTAAAGTTTCCAGCTTCCTCCTTCTGTGGCTTGCTCTTATGTTTCTTTTCTTCACACATAATCAGGCCGCCTCTACCATGAAAACGGCGGCGGCAGTGTCGTCGCAGCTGTACGGCGCCACCCAAGGCAGCCTCCGTCCGCAAGAATGCGGTGGGCGGTGCACGGCGCGATGCTCGGCGACGTCGTTCAAGAAGCCGTGTATGGTATTCTGCAGAAAGTGCTGTGCGAAGTGCTTGTGCGTTCCTCCGGGTACCTACGGGAACAAGCAGATGTGCCCTTGCTATAACAATTGGAAGACCAAGCGCGGTGGCCCAAAATGCCCTTGATTTTATCACTAATTTTCAATTTATTATCGAAGGCGTTAATAATATATATGATGTCATAATTGACATGAATTTCGTGGTTGCGTTTTTTCATTCCGTTATAATTTTGGATCATATTCTCGAACTTTCAATTTTACAAAATTCTATAATCAAGTTCTCGTGTTGCAAAACATATAAAACAACGAATTATAAAATTGTCGCAGTTTAACTCGTTGTTTTAACTCTATAAATTTTAAAATTGTTGCAATTTAATGTATTTTTTAAATTCTATATAATTTGAAATTGTGATATTGGTGGTTAAAGGAATTAGTTCTAGGTTGCTGTTGAGCGGCATGGATTTAAGAAAACAAAAA

Coding sequence (CDS)

ATGGCTAAAGTTTCCAGCTTCCTCCTTCTGTGGCTTGCTCTTATGTTTCTTTTCTTCACACATAATCAGGCCGCCTCTACCATGAAAACGGCGGCGGCAGTGTCGTCGCAGCTGTACGGCGCCACCCAAGGCAGCCTCCGTCCGCAAGAATGCGGTGGGCGGTGCACGGCGCGATGCTCGGCGACGTCGTTCAAGAAGCCGTGTATGGTATTCTGCAGAAAGTGCTGTGCGAAGTGCTTGTGCGTTCCTCCGGGTACCTACGGGAACAAGCAGATGTGCCCTTGCTATAACAATTGGAAGACCAAGCGCGGTGGCCCAAAATGCCCTTGA

Protein sequence

MAKVSSFLLLWLALMFLFFTHNQAASTMKTAAAVSSQLYGATQGSLRPQECGGRCTARCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP

Homology

[Close]

BLAST of Lcy07g018230 vs. ExPASy Swiss-Prot
Match: P27057 (Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.6e-31
Identity = 66/112 (58.93%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 1   MAKVSSFLLLWLALMFLFFTHNQAASTMKTAAAV---SSQLYGATQGSLRPQECGGRCTA 60
           MA   S +L  L ++FL       A+ M+        ++QLYG ++G L PQ+C  +CT 
Sbjct: 1   MAGKMSIVLFVLLVVFLTQNQVSRANIMRDEQQQQQRNNQLYGVSEGRLHPQDCQPKCTY 60

Query: 61  RCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 110
           RCS TS+KKPCM FC+KCCAKCLCVP GTYGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 61  RCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112

[Close]

BLAST of Lcy07g018230 vs. ExPASy Swiss-Prot
Match: Q6NMQ7 (Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.5e-30
Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 1   MAK-VSSFLLLWLALMFLFFTHNQAASTMKTAAAVSSQLYGATQGSLRPQECGGRCTARC 60
           MAK ++SFLLL +   F+         TM   A    + YG   GSL+  +CGG+CT RC
Sbjct: 1   MAKLITSFLLLTILFTFV-------CLTMSKEAEYHPESYG--PGSLKSYQCGGQCTRRC 60

Query: 61  SATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 110
           S T + KPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKT++GGPKCP
Sbjct: 61  SNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]

BLAST of Lcy07g018230 vs. ExPASy Swiss-Prot
Match: Q84J95 (Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-27
Identity = 50/66 (75.76%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 44  GSLRPQECGGRCTARCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 103
           G L+PQ+C  +C+ RCSATS KKPCM FC KCC KCLCVPPGT+GNKQ CPCYNNWKTK 
Sbjct: 32  GKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKE 91

Query: 104 GGPKCP 110
           G PKCP
Sbjct: 92  GRPKCP 97

[Close]

BLAST of Lcy07g018230 vs. ExPASy Swiss-Prot
Match: A8MR46 (Gibberellin-regulated protein 13 OS=Arabidopsis thaliana OX=3702 GN=GASA13 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.3e-26
Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 50  ECGGRCTARCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           ECG RC  RCS T +KKPC+ FC KCC KCLCVPPGTYGNKQ+CPCYNNWKTK GGPKCP
Sbjct: 44  ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

[Close]

BLAST of Lcy07g018230 vs. ExPASy Swiss-Prot
Match: P47926 (Protein RSI-1 OS=Solanum lycopersicum OX=4081 GN=RSI-1 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-25
Identity = 49/64 (76.56%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 46  LRPQECGGRCTARCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGG 105
           LRP +C  RCT RCSATS KKPCM FC+KCCA CLCVP G YGNKQ CPCYNNWKT+ G 
Sbjct: 33  LRPTDCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGK 92

Query: 106 PKCP 110
           PKCP
Sbjct: 93  PKCP 96

[Close]

BLAST of Lcy07g018230 vs. ExPASy TrEMBL
Match: A0A6J1DFN7 (protein GAST1-like OS=Momordica charantia OX=3673 GN=LOC111020637 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45
Identity = 90/109 (82.57%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MAKVSSFLLLWLALMFLFFTHNQAASTMKTAAAVSSQLYGATQGSLRPQECGGRCTARCS 60
           MA +SS LLL L LMFLFFTHNQAAS+ + AAA SS+LYG T+G+L+PQECGGRCTARCS
Sbjct: 1   MASISSLLLLSLPLMFLFFTHNQAASSTE-AAATSSELYGTTEGTLQPQECGGRCTARCS 60

Query: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 110
           AT+FKKPCM FC+KCCA CLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
Sbjct: 61  ATAFKKPCMFFCKKCCATCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 108

[Close]

BLAST of Lcy07g018230 vs. ExPASy TrEMBL
Match: A0A6J1J9B2 (protein GAST1-like OS=Cucurbita maxima OX=3661 GN=LOC111483761 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.3e-44
Identity = 90/109 (82.57%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MAKVSSFLLLWLALMFLFFTHNQAASTMKTAAAVSSQLYGATQGSLRPQECGGRCTARCS 60
           MA +S+FLLL LALM L  TH QAA++++TA A SS++YG TQGSLRP+ECGGRCT RCS
Sbjct: 1   MATLSTFLLLCLALMLLSSTHIQAAASIETAVA-SSKMYGGTQGSLRPEECGGRCTVRCS 60

Query: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 110
           ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
Sbjct: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 108

[Close]

BLAST of Lcy07g018230 vs. ExPASy TrEMBL
Match: A0A6J1FVD8 (gibberellin-regulated protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111448790 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.7e-44
Identity = 89/109 (81.65%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 1   MAKVSSFLLLWLALMFLFFTHNQAASTMKTAAAVSSQLYGATQGSLRPQECGGRCTARCS 60
           MA +S+FLLL LA M L  TH QAA++++TA A SS++YG TQGSLRP+ECGGRCT RCS
Sbjct: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVA-SSKMYGGTQGSLRPEECGGRCTVRCS 60

Query: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 110
           ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
Sbjct: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 108

[Close]

BLAST of Lcy07g018230 vs. ExPASy TrEMBL
Match: A0A7C9AK22 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.6e-36
Identity = 75/103 (72.82%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 8   LLLWLALMFLFFTHNQAAS-TMKTAAAVSSQLYGATQGSLRPQECGGRCTARCSATSFKK 67
           LLL + LM +    NQAAS + +     S  +YGATQGSL PQECGGRCTARCSAT +KK
Sbjct: 9   LLLCVTLMLVLIAANQAASQSTQPQGQTSHPMYGATQGSLHPQECGGRCTARCSATQYKK 68

Query: 68  PCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 110
           PC+ FC KCCAKCLCVPPGTYGNKQ+CPCYNNWKTKRGGPKCP
Sbjct: 69  PCLFFCNKCCAKCLCVPPGTYGNKQLCPCYNNWKTKRGGPKCP 111

[Close]

BLAST of Lcy07g018230 vs. ExPASy TrEMBL
Match: A0A5J5C3X0 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_001523 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.3e-36
Identity = 75/114 (65.79%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 1   MAKVSSFLLLWLALMFLFFTHN-QAASTMKTAAAV----SSQLYGATQGSLRPQECGGRC 60
           MAK+   L++   LM +F T N QA+ST   A+ +    ++Q+YG TQGSLRPQEC  RC
Sbjct: 1   MAKIQGILMISYVLMLVFLTENLQASSTELLASQLQPQGNNQMYGITQGSLRPQECAPRC 60

Query: 61  TARCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 110
           T+RCS T++KKPCM +C+KCCAKCLCVPPGTYGNKQ+CPCYNNWKTKRGGPKCP
Sbjct: 61  TSRCSKTAYKKPCMFYCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTKRGGPKCP 114

[Close]

BLAST of Lcy07g018230 vs. NCBI nr
Match: XP_022153040.1 (protein GAST1-like [Momordica charantia])

HSP 1 Score: 191.8 bits (486), Expect = 3.1e-45
Identity = 90/109 (82.57%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MAKVSSFLLLWLALMFLFFTHNQAASTMKTAAAVSSQLYGATQGSLRPQECGGRCTARCS 60
           MA +SS LLL L LMFLFFTHNQAAS+ + AAA SS+LYG T+G+L+PQECGGRCTARCS
Sbjct: 1   MASISSLLLLSLPLMFLFFTHNQAASSTE-AAATSSELYGTTEGTLQPQECGGRCTARCS 60

Query: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 110
           AT+FKKPCM FC+KCCA CLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
Sbjct: 61  ATAFKKPCMFFCKKCCATCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 108

[Close]

BLAST of Lcy07g018230 vs. NCBI nr
Match: XP_022985831.1 (protein GAST1-like [Cucurbita maxima])

HSP 1 Score: 188.7 bits (478), Expect = 2.6e-44
Identity = 90/109 (82.57%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MAKVSSFLLLWLALMFLFFTHNQAASTMKTAAAVSSQLYGATQGSLRPQECGGRCTARCS 60
           MA +S+FLLL LALM L  TH QAA++++TA A SS++YG TQGSLRP+ECGGRCT RCS
Sbjct: 1   MATLSTFLLLCLALMLLSSTHIQAAASIETAVA-SSKMYGGTQGSLRPEECGGRCTVRCS 60

Query: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 110
           ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
Sbjct: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 108

[Close]

BLAST of Lcy07g018230 vs. NCBI nr
Match: XP_022944307.1 (gibberellin-regulated protein 5-like [Cucurbita moschata] >KAG7010285.1 Protein GAST1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 187.2 bits (474), Expect = 7.6e-44
Identity = 89/109 (81.65%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 1   MAKVSSFLLLWLALMFLFFTHNQAASTMKTAAAVSSQLYGATQGSLRPQECGGRCTARCS 60
           MA +S+FLLL LA M L  TH QAA++++TA A SS++YG TQGSLRP+ECGGRCT RCS
Sbjct: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVA-SSKMYGGTQGSLRPEECGGRCTVRCS 60

Query: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 110
           ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
Sbjct: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 108

[Close]

BLAST of Lcy07g018230 vs. NCBI nr
Match: XP_023511912.1 (protein GAST1-like [Cucurbita pepo subsp. pepo] >XP_023511913.1 protein GAST1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185.3 bits (469), Expect = 2.9e-43
Identity = 89/109 (81.65%), Postives = 97/109 (88.99%), Query Frame = 0


Query: 1   MAKVSSFLLLWLALMFLFFTHNQAASTMKTAAAVSSQLYGATQGSLRPQECGGRCTARCS 60
           MA +S+FLLL  ALM L  TH QAA +++TA A SS++YG TQGSLRP+ECGGRCT RCS
Sbjct: 1   MATLSTFLLLCSALMLLSSTHIQAAVSIETAVA-SSKMYGGTQGSLRPEECGGRCTVRCS 60

Query: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 110
           ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP
Sbjct: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 108

[Close]

BLAST of Lcy07g018230 vs. NCBI nr
Match: KAG6570409.1 (Protein GAST1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172.6 bits (436), Expect = 1.9e-39
Identity = 83/103 (80.58%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 1   MAKVSSFLLLWLALMFLFFTHNQAASTMKTAAAVSSQLYGATQGSLRPQECGGRCTARCS 60
           MA +S+FLLL LA M L  TH QAA++++TA A SS++YG TQGSLRP+ECGGRCT RCS
Sbjct: 1   MATLSTFLLLCLAFMLLSSTHIQAAASIETAVA-SSKMYGGTQGSLRPEECGGRCTVRCS 60

Query: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 104
           ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR
Sbjct: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 102

[Close]

BLAST of Lcy07g018230 vs. TAIR 10
Match: AT1G74670.1 (Gibberellin-regulated family protein )

HSP 1 Score: 131.3 bits (329), Expect = 4.6e-31
Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 1   MAK-VSSFLLLWLALMFLFFTHNQAASTMKTAAAVSSQLYGATQGSLRPQECGGRCTARC 60
           MAK ++SFLLL +   F+         TM   A    + YG   GSL+  +CGG+CT RC
Sbjct: 1   MAKLITSFLLLTILFTFV-------CLTMSKEAEYHPESYG--PGSLKSYQCGGQCTRRC 60

Query: 61  SATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 110
           S T + KPCM FC+KCCAKCLCVPPGTYGNKQ+CPCYNNWKT++GGPKCP
Sbjct: 61  SNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]

BLAST of Lcy07g018230 vs. TAIR 10
Match: AT3G02885.1 (GAST1 protein homolog 5 )

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-28
Identity = 50/66 (75.76%), Postives = 55/66 (83.33%), Query Frame = 0


Query: 44  GSLRPQECGGRCTARCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKR 103
           G L+PQ+C  +C+ RCSATS KKPCM FC KCC KCLCVPPGT+GNKQ CPCYNNWKTK 
Sbjct: 32  GKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKE 91

Query: 104 GGPKCP 110
           G PKCP
Sbjct: 92  GRPKCP 97

[Close]

BLAST of Lcy07g018230 vs. TAIR 10
Match: AT3G10185.1 (Gibberellin-regulated family protein )

HSP 1 Score: 119.0 bits (297), Expect = 2.4e-27
Identity = 48/60 (80.00%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 50  ECGGRCTARCSATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 109
           ECG RC  RCS T +KKPC+ FC KCC KCLCVPPGTYGNKQ+CPCYNNWKTK GGPKCP
Sbjct: 44  ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

[Close]

BLAST of Lcy07g018230 vs. TAIR 10
Match: AT2G30810.1 (Gibberellin-regulated family protein )

HSP 1 Score: 112.8 bits (281), Expect = 1.7e-25
Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = 0


Query: 8   LLLWLALMFLFFTHNQAASTMKTAAAVSSQLYGATQGSLRPQECGGRCTARCSATSFKKP 67
           +++++    LF T       +++ A   +      +GSL+P+EC   C  RCSATS +KP
Sbjct: 5   IVVFVISSLLFATQFSNGDELESQAQAPAIHKNGGEGSLKPEECPKACEYRCSATSHRKP 64

Query: 68  CMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 110
           C+ FC KCC KCLCVP GTYG+K+ CPCYNNW TK GGPKCP
Sbjct: 65  CLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106

[Close]

BLAST of Lcy07g018230 vs. TAIR 10
Match: AT5G15230.1 (GAST1 protein homolog 4 )

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-23
Identity = 53/109 (48.62%), Postives = 65/109 (59.63%), Query Frame = 0


Query: 1   MAKVSSFLLLWLALMFLFFTHNQAASTMKTAAAVSSQLYGATQGSLRPQECGGRCTARCS 60
           MAK    + L L L+ LF       ++  +    S + YG   GSL+  +C   C  RC 
Sbjct: 1   MAKSYGAIFL-LTLIVLFMLQTMVMASSGSNVKWSQKRYG--PGSLKRTQCPSECDRRCK 60

Query: 61  ATSFKKPCMVFCRKCCAKCLCVPPGTYGNKQMCPCYNNWKTKRGGPKCP 110
            T + K C+ FC KCC KCLCVPPG YGNKQ+C CYNNWKT+ GGPKCP
Sbjct: 61  KTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

The following BLAST results are available for this feature:

BLAST of Lcy07g018230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27057	2.6e-31	58.93	Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1	[more]
Q6NMQ7	6.5e-30	59.09	Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV...	[more]
Q84J95	1.8e-27	75.76	Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV...	[more]
A8MR46	3.3e-26	80.00	Gibberellin-regulated protein 13 OS=Arabidopsis thaliana OX=3702 GN=GASA13 PE=3 ...	[more]
P47926	1.3e-25	76.56	Protein RSI-1 OS=Solanum lycopersicum OX=4081 GN=RSI-1 PE=2 SV=1	[more]

BLAST of Lcy07g018230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DFN7	1.5e-45	82.57	protein GAST1-like OS=Momordica charantia OX=3673 GN=LOC111020637 PE=3 SV=1	[more]
A0A6J1J9B2	1.3e-44	82.57	protein GAST1-like OS=Cucurbita maxima OX=3661 GN=LOC111483761 PE=3 SV=1	[more]
A0A6J1FVD8	3.7e-44	81.65	gibberellin-regulated protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC1114487...	[more]
A0A7C9AK22	1.6e-36	72.82	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1	[more]
A0A5J5C3X0	6.3e-36	65.79	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_001523 PE=3 SV=1	[more]

BLAST of Lcy07g018230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153040.1	3.1e-45	82.57	protein GAST1-like [Momordica charantia]	[more]
XP_022985831.1	2.6e-44	82.57	protein GAST1-like [Cucurbita maxima]	[more]
XP_022944307.1	7.6e-44	81.65	gibberellin-regulated protein 5-like [Cucurbita moschata] >KAG7010285.1 Protein ...	[more]
XP_023511912.1	2.9e-43	81.65	protein GAST1-like [Cucurbita pepo subsp. pepo] >XP_023511913.1 protein GAST1-li...	[more]
KAG6570409.1	1.9e-39	80.58	Protein GAST1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy07g018230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74670.1	4.6e-31	59.09	Gibberellin-regulated family protein	[more]
AT3G02885.1	1.2e-28	75.76	GAST1 protein homolog 5	[more]
AT3G10185.1	2.4e-27	80.00	Gibberellin-regulated family protein	[more]
AT2G30810.1	1.7e-25	50.00	Gibberellin-regulated family protein	[more]
AT5G15230.1	1.2e-23	48.62	GAST1 protein homolog 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 50..109 e-value: 1.3E-22 score: 79.6
None	No IPR available	PANTHER	PTHR23201:SF52	GIBBERELLIN-REGULATED PROTEIN 13	coord: 4..109
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 4..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g018230.1	Lcy07g018230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane