Lcy07g013640 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g013640
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionDNA polymerase zeta processivity subunit
LocationChr07: 42772382 .. 42776079 (-)
RNA-Seq ExpressionLcy07g013640
SyntenyLcy07g013640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTACAGCACTGCAATTGGAAGTTGGAACTCGACTGCAACACAGAGAAGGCTGCAGAATTTACAGATATGAATCGATACGATCACTTTGGTAGCCCAAGTTTCAATCTCTAGATGCAGGAGCTTAATGGAACACGACCCATCTTTTGTAAGTTTCAACCCTTGCTTGTTCTCTTCCCCACCTCAAAAGAACAAAGAAAAGATACAAAAAGAAGAGGAAAAGAAATCGCTCCTTCGTTGCCATTTGTTTCGTTGTTAGTTTTGTGTTAGATTGGTTCTTCCCAGCAATTATTTGCTCGGATTTTGTTGGGTCGTTTTTGTTTTTGGAGTTTAATTCGCTATGATTCATATGTGGAAGAAGGAATTAGCTTCCTGGACATTTATCTGTGTTAATTTACAAGCTGTGAATTGTTAAGAAGAATTAAGAAGGATTGGAATTATGGTGAACAGTTGAGCCAGTCTATGAATTGTTGGTTCCTGATGGACACTGGTGCTGCAGCAAACCGTTGCTCTTAGGATGTTTAACAGTTGAATTTTTCTGAAATGAAAATTGAAATGACAACATTTGTCTGAGTGAGTTGAGTTCCATTAAACCTGTTGACAACTACAGGAAATGGGAAGATATTTTGTATTGTACATTAAAATATTGAAGGCAATGTTTAGAACTAAACTTTAAGAAGACAATCCAATAAGATAACTAAAACAGTTGAGCTGTTAACTAAACATCTTTAATGCTATTCCATCTTTGATATTCATGCTACTTGCTTGAAGATAATGATTGCCTTTGTTTTTTAATGCAGTCAAATGGAGTGTGCTCGAGATCATTTATGTAATTGGCTTAGATGTTTATGTTGAGGATTTGAACGTCTAGTGTAAAGACCATATCACTTCACTTTATCTAGCCAATGGACTCAAGAGACAATAAAGTTCCGCCTCAAGGTTTACCATTTTATCTTGATTTGTTCCAGCCCCCAGTTACTTTAGTTTCCTGATGATAAGAGTAAAAGTAACAATGCTATTGAACTATGTGTAGGTGAGACGGTTCAGATTCTAGTAGAATTCTTGGAGGTGGCCATTACATCAATTGTCTTCCTCAAAGGCATTTACCCTTCTGGTGCAATTCTTACTTTAATCTATTTGTTTAAGATCCTATTATCTGCTTTATTTATTGGAAAGGATGGTGATTGCTAGGAAGCTTATTTCACTGTATTTCTACCAAGTAATTAAGAAACATTGGTATATGGGAATGTTACTTTACAAAGGAAACCTAAATAACTTGAAATTTATTTGGTTACCTGTAAGATTGGTCCTTTACACCCTACCCCTTAACCACAGGGGAAAAAGATACCAGTTTAGTCAATATTAATGAATTAAAGAACCGAAAGAGTGACTAATTATTGGTGGGGTTTATATGAAGGTGCTTTTGAAAGAAGAAGGTACATGAATGCGGTTGTGCAGAGGGCTCGTCATCCTGAGCTGCAGGATTACATCCACTCAACTGTTTCGGGGCTACTACCTTTCATTCAAAAGGTTGACCATTCACTTGTATTCTTGTCCTTTATCTGCTAAAAATGGTCCTAAATTTCTTGTCTACCCATGTGCCATTTAGAATTGAAACCAGGTCCTTTTTTCAAGGACAACTTGAACAGTGGATTATTACTTTCACATGGCTACCTCTTGCTTGGTTTTAGGAAGAGGAGTTGTTTATGATTGGAACCAGTGAAGGAAATTATTGGGTTCTGTGGTTGTAAGTATTAGTTGGGAAGATTAAATTTAGGATGCTTGGTGTTAACTGTTAAGCCTGGCTATAAGCTATGAACGGGTTGATTATTTACTGGTATTCTCACAATATAGGACAACCTGTGTTTGCAAATGCCACTCCGTTCAATGAATCTTGAACCGAGAGAATTTCATTGAAAACGTAAAGTAGGTTTCTAGGTGATGCAATTGCGAGATGACATATACAACTTTATTGATCTCAGAGAAATGGTAGTATCTTTAATAATTTTAGAACTCTTGAGAATTAACTTCTTCTTCATTAGGGCATACCTAGGAGTATTGGTTATTGGATTTCAGCCTTAATTTGAGAGTCTGAGTATAAAGATCCATAAAGTTGATATGTCATAATGTCAATAATTTAAGAGTCTGAACTCTGATCTTTAATAATTAAGGTCCATCATTACTTCAACATTCAGATCTCCTGTGTTTGTTATCTTCTTTTAGGTAGAGAAAATTTTGACTTTCTTACAACAATATTTGTCGTGGTTCCTCTCTTAATGGATTATGCATTGATGTCTTCCATATCTGAGCCGATCTATTATCATAGAACATGTAATTATGGAACTTCATAAGCCAAAGAAAATTAAGGAAACAACAATAAATGTCGTAAATAATTCTTCATGTAATTTACTGAGTAGTCTGAACATGAGTTTCCTCTACAATTAGGGGCTGGTGGAGAGAGTGGCAGTTATATTTTTCAACGGTGAAAATATCCAAGTGGAGAGATTTGTTTTCAAGCTCATGGTGAACCAGTCTTATGAATCAAAGGTCGAAAATTCCGACCTGGAATTCGCCTTAAGATCATTCTTGATCAAGCTCTCTGTCTCAGAACCTCTAACCAAGGCTCTACCTCCTGGTGAGAGCTTTTCTTAGTTCACTAATACTTCAACCCTTTGTAATCGCCATCTGTTGCATTTACTTAATTCTTTCACAAACGATTGGAGGAACTTCTATAAATTTATCTTTGTATAACAGATTGCAAATGGGAAATAACTGCCTACTTCCAAACCCTCCCAAGTTCCGGTACAAGTAAGGATGCAGAGTTATGGATCCCAACAGATACAAAGCAATGGCAACAACCACCAGTAATCACCCCCATCAAGTCCATGAACAGCCAACCTCTGAGTTTGCAGTTATATCTAGAACATCCTAGCTTATCTGAGCCAAAACCCTGTGAATAAATGTGCATTGTTGTGAAAAGATTTTGCCTAGATTATTCAAATGGAAGGTTTCTTGAGCTTGTATTTTAGATTTTCTGGACACTGTGCATAGTATGTATACTCATACAACAACTATTCTTTTAGCACATCATTTTAGAAGTCTATGCAATGGCTGGCTTATTACAAGACTCTTTTCTTTTTCAGGTTTGGATGAAGGGTATGGACAAATACTACCATACTAGTCTAGTACAAATCTTACATCTTTATGTAGCATGTAGACTTGTATTCCAGGTCAGAGATGTGAAAATATGAAGATTTGAAAACATATGTCAGAAAGAACCCAGAAGGAAGGCATCATACATGTATGAAAGGCTGACAAGGTTGGGTCCATTATTGCCCAGAAGTTGGAGATAGATCTGAAGCAGAAAAAGGAAAAGGAAAAGGAAAAGGGTTGTTGTTTGGTAGATCAATGAGAGACATCATAGTTGGGGGTTTGAGTTTGAGGGTGGATCCCAGGTTGTCAGGCTTGCTACTGTGGCTGTCTTCATTCATGATGGCAATGACATAACTTCCCACTCTCCTTTTTTTAGCTGAGATGTAATGAGTGAAAATCAGAGATGAATATGAATTCTCTGAAACCTTTCAGACCCTCACCACAAAATCAACTTTATATATATATTTATAAGTTTTCTTTTCTCTATGCCACCTACCTGTCCTATCCACTGCCAAAATGGCATGGTAAATTCCTATCAGATCTCAGTC

mRNA sequence

CTACAGCACTGCAATTGGAAGTTGGAACTCGACTGCAACACAGAGAAGGCTGCAGAATTTACAGATATGAATCGATACGATCACTTTGGTAGCCCAAGTTTCAATCTCTAGATGCAGGAGCTTAATGGAACACGACCCATCTTTTTCAAATGGAGTGTGCTCGAGATCATTTATGTAATTGGCTTAGATGTTTATGTTGAGGATTTGAACGTCTAGTGTAAAGACCATATCACTTCACTTTATCTAGCCAATGGACTCAAGAGACAATAAAGTTCCGCCTCAAGGTGAGACGGTTCAGATTCTAGTAGAATTCTTGGAGGTGGCCATTACATCAATTGTCTTCCTCAAAGGCATTTACCCTTCTGGTGCTTTTGAAAGAAGAAGGTACATGAATGCGGTTGTGCAGAGGGCTCGTCATCCTGAGCTGCAGGATTACATCCACTCAACTGTTTCGGGGCTACTACCTTTCATTCAAAAGGGGCTGGTGGAGAGAGTGGCAGTTATATTTTTCAACGGTGAAAATATCCAAGTGGAGAGATTTGTTTTCAAGCTCATGGTGAACCAGTCTTATGAATCAAAGGTCGAAAATTCCGACCTGGAATTCGCCTTAAGATCATTCTTGATCAAGCTCTCTGTCTCAGAACCTCTAACCAAGGCTCTACCTCCTGATTGCAAATGGGAAATAACTGCCTACTTCCAAACCCTCCCAAGTTCCGGTACAAGTAAGGATGCAGAGTTATGGATCCCAACAGATACAAAGCAATGGCAACAACCACCAGTAATCACCCCCATCAAGTCCATGAACAGCCAACCTCTGAGTTTGCAGTTATATCTAGAACATCCTAGCTTATCTGAGCCAAAACCCTGTGAATAAATGTGCATTGTTGTGAAAAGATTTTGCCTAGATTATTCAAATGGAAGGTTTCTTGAGCTTGTATTTTAGATTTTCTGGACACTGTGCATAGTTTGGATGAAGGGTATGGACAAATACTACCATACTAGTCTAGTACAAATCTTACATCTTTATGTAGCATGTAGACTTGTATTCCAGGTCAGAGATGTGAAAATATGAAGATTTGAAAACATATGTCAGAAAGAACCCAGAAGGAAGGCATCATACATGTATGAAAGGCTGACAAGGTTGGGTCCATTATTGCCCAGAAGTTGGAGATAGATCTGAAGCAGAAAAAGGAAAAGGAAAAGGAAAAGGGTTGTTGTTTGGTAGATCAATGAGAGACATCATAGTTGGGGGTTTGAGTTTGAGGGTGGATCCCAGGTTGTCAGGCTTGCTACTGTGGCTGTCTTCATTCATGATGGCAATGACATAACTTCCCACTCTCCTTTTTTTAGCTGAGATGTAATGAGTGAAAATCAGAGATGAATATGAATTCTCTGAAACCTTTCAGACCCTCACCACAAAATCAACTTTATATATATATTTATAAGTTTTCTTTTCTCTATGCCACCTACCTGTCCTATCCACTGCCAAAATGGCATGGTAAATTCCTATCAGATCTCAGTC

Coding sequence (CDS)

ATGGACTCAAGAGACAATAAAGTTCCGCCTCAAGGTGAGACGGTTCAGATTCTAGTAGAATTCTTGGAGGTGGCCATTACATCAATTGTCTTCCTCAAAGGCATTTACCCTTCTGGTGCTTTTGAAAGAAGAAGGTACATGAATGCGGTTGTGCAGAGGGCTCGTCATCCTGAGCTGCAGGATTACATCCACTCAACTGTTTCGGGGCTACTACCTTTCATTCAAAAGGGGCTGGTGGAGAGAGTGGCAGTTATATTTTTCAACGGTGAAAATATCCAAGTGGAGAGATTTGTTTTCAAGCTCATGGTGAACCAGTCTTATGAATCAAAGGTCGAAAATTCCGACCTGGAATTCGCCTTAAGATCATTCTTGATCAAGCTCTCTGTCTCAGAACCTCTAACCAAGGCTCTACCTCCTGATTGCAAATGGGAAATAACTGCCTACTTCCAAACCCTCCCAAGTTCCGGTACAAGTAAGGATGCAGAGTTATGGATCCCAACAGATACAAAGCAATGGCAACAACCACCAGTAATCACCCCCATCAAGTCCATGAACAGCCAACCTCTGAGTTTGCAGTTATATCTAGAACATCCTAGCTTATCTGAGCCAAAACCCTGTGAATAA

Protein sequence

MDSRDNKVPPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLMVNQSYESKVENSDLEFALRSFLIKLSVSEPLTKALPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPVITPIKSMNSQPLSLQLYLEHPSLSEPKPCE
Homology
BLAST of Lcy07g013640 vs. ExPASy Swiss-Prot
Match: Q94FL5 (DNA polymerase zeta processivity subunit OS=Arabidopsis thaliana OX=3702 GN=REV7 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 6.0e-77
Identity = 137/192 (71.35%), Postives = 163/192 (84.90%), Query Frame = 0

Query: 12  GETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQDYIHSTVSGLL 71
           GE  + LV+F+EVAIT IV+LKG YPS AFERRRYMN VVQRARHPEL+DYIHS  SGLL
Sbjct: 10  GEVGRTLVDFMEVAITMIVYLKGFYPSAAFERRRYMNVVVQRARHPELRDYIHSAASGLL 69

Query: 72  PFIQKGLVERVAVIFFNGENIQVERFVFKLMVNQSYESKVENSDLEFALRSFLIKLSVSE 131
           PFI+KGLVERVAV+FF+ +N+ VERF+FK+ +  S  + VE   LEFALRSFLIKLSVS+
Sbjct: 70  PFIEKGLVERVAVVFFSEDNVPVERFIFKITIKPSCAALVEEGQLEFALRSFLIKLSVSK 129

Query: 132 PLTKALPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPVITPIKSMNSQPLSL 191
            L K LP +C+WE+TAY ++LP  G+SK+AELWIPTDTKQWQ PPV+TP+KS+NS+PL L
Sbjct: 130 SLVKPLPLNCRWEVTAYLRSLPQVGSSKEAELWIPTDTKQWQNPPVLTPVKSLNSEPLCL 189

Query: 192 QLYLEHPSLSEP 204
           QLYLEHPSLSEP
Sbjct: 190 QLYLEHPSLSEP 201

BLAST of Lcy07g013640 vs. ExPASy Swiss-Prot
Match: Q8QFR4 (Mitotic spindle assembly checkpoint protein MAD2B OS=Xenopus laevis OX=8355 GN=mad2l2 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.8e-23
Identity = 66/189 (34.92%), Postives = 110/189 (58.20%), Query Frame = 0

Query: 17  ILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQDYIHSTVSGLLPFIQK 76
           IL EFLEVA+  I++++ +YP+G F++R+  N  VQ + HPEL  YI  T+  + P I+K
Sbjct: 18  ILCEFLEVAVHLILYVREVYPTGIFQKRKKYNVPVQMSCHPELNRYIQDTLHCVKPLIEK 77

Query: 77  GLVERVAVIFFNGENIQVERFVFKL----MVNQSYESKVENSDLEFALRSFLIKLSVSEP 136
             VE+V V+  + E+  VERFVF++    +++ S +S +  S +E  LR+F++K+SV + 
Sbjct: 78  NDVEKVVVVILDKEHHPVERFVFEIAQPPLLSISSDSLL--SHVEQLLRAFILKISVCDA 137

Query: 137 LTKALPPDCKWEITAYFQTLPSSGTSKDAEL----WIPTDTKQ-WQQPPVITPIKSMNSQ 196
           +    PP C + +  + +   +    K   +    WI  D +    Q P + P+K+M S 
Sbjct: 138 VLDNNPPGCTFTLLVHTREAATRNMEKIQVIKDFPWILADEQDVHMQEPRLIPLKTMTSD 197

BLAST of Lcy07g013640 vs. ExPASy Swiss-Prot
Match: Q568H3 (Mitotic spindle assembly checkpoint protein MAD2B OS=Danio rerio OX=7955 GN=mad2l2 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.5e-23
Identity = 64/187 (34.22%), Postives = 105/187 (56.15%), Query Frame = 0

Query: 17  ILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQDYIHSTVSGLLPFIQK 76
           IL EFLEVAI  I++++ IYPSG F++R+  N  VQ + HP+L  YI  T+  + P I+K
Sbjct: 18  ILCEFLEVAIHLILYVRDIYPSGIFQKRQKYNVPVQMSCHPQLNQYIQDTLHCVKPLIEK 77

Query: 77  GLVERVAVIFFNGENIQVERFVFKLMVNQ--SYESKVENSDLEFALRSFLIKLSVSEPLT 136
              E+V V+  N E+  VERFVF++      +  S+   S +E  LR+ ++K+SV + + 
Sbjct: 78  NEAEKVVVVIMNKEHHPVERFVFEISQPPLLAISSETLLSHVEQLLRAMILKISVCDAVL 137

Query: 137 KALPPDCKWEITAYFQTLPSSGTSKDAEL----WIPTDTKQ-WQQPPVITPIKSMNSQPL 196
            + PP C + +  + +   +    K   +    WI  D ++   +   + P+K+M S  L
Sbjct: 138 DSNPPGCTFTVLVHTREAATRNMEKVQVIKDFPWIVADEQEVHMEEAKLIPLKTMTSDIL 197

BLAST of Lcy07g013640 vs. ExPASy Swiss-Prot
Match: Q28H85 (Mitotic spindle assembly checkpoint protein MAD2B OS=Xenopus tropicalis OX=8364 GN=mad2l2 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.5e-23
Identity = 66/189 (34.92%), Postives = 109/189 (57.67%), Query Frame = 0

Query: 17  ILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQDYIHSTVSGLLPFIQK 76
           IL EFLEVA+  I++++ +YP G F++R+  N  VQ + HPEL  YI  T+  + P I+K
Sbjct: 18  ILCEFLEVAVHLILYVREVYPIGIFQKRKKYNVPVQMSCHPELNRYIQDTLHCVKPLIEK 77

Query: 77  GLVERVAVIFFNGENIQVERFVFKL----MVNQSYESKVENSDLEFALRSFLIKLSVSEP 136
             VE+V V+  + E+  VERFVF++    +++ S +S +  S +E  LR+F++K+SV + 
Sbjct: 78  NDVEKVVVVILDKEHHPVERFVFEIAQPPLLSISSDSLL--SHVEQLLRAFILKISVCDA 137

Query: 137 LTKALPPDCKWEITAYFQTLPSSGTSKDAEL----WIPTDTKQ-WQQPPVITPIKSMNSQ 196
           +    PP C + +  + +   +    K   +    WI  D +    Q P + P+K+M S 
Sbjct: 138 VLDNNPPGCTFTLLVHTREAATRNMEKIQVIKDFPWILADEQDVHMQEPRLIPLKTMTSD 197

BLAST of Lcy07g013640 vs. ExPASy Swiss-Prot
Match: Q4KWZ6 (Mitotic spindle assembly checkpoint protein MAD2B OS=Gallus gallus OX=9031 GN=MAD2L2 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-22
Identity = 64/189 (33.86%), Postives = 108/189 (57.14%), Query Frame = 0

Query: 17  ILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQDYIHSTVSGLLPFIQK 76
           +L EFLEVA+  I++++ +YP G F++R+  N  VQ + HPEL  YI  T+  + P ++K
Sbjct: 18  VLSEFLEVAVHLILYVREVYPIGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPLLEK 77

Query: 77  GLVERVAVIFFNGENIQVERFVFKL----MVNQSYESKVENSDLEFALRSFLIKLSVSEP 136
             VE+V V+  + E+  VERFVF++    +++ S ES +  S +E  LR+F++K+SV + 
Sbjct: 78  NDVEKVVVVILDKEHHPVERFVFEITQPPLLSISSESLL--SHVEQLLRAFILKISVCDA 137

Query: 137 LTKALPPDCKWEITAYFQTLPSSGTSKDAEL----WIPTDTKQ-WQQPPVITPIKSMNSQ 196
           +    PP C + +  + +   +    K   +    WI  D +      P + P+K+M S 
Sbjct: 138 VLDNNPPGCTFTVLVHTREAATRNMEKIQVIKDFPWILADEQDVHMHDPRLIPLKTMTSD 197

BLAST of Lcy07g013640 vs. ExPASy TrEMBL
Match: A0A6J1G790 (DNA polymerase zeta processivity subunit isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451503 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.5e-110
Identity = 202/207 (97.58%), Postives = 205/207 (99.03%), Query Frame = 0

Query: 1   MDSRDNKVPPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60
           MDSRDNKV PQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ
Sbjct: 1   MDSRDNKVAPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLMVNQSYESKVENSDLEFAL 120
           DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKL+VNQSYESKVENSDLEFAL
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLIVNQSYESKVENSDLEFAL 120

Query: 121 RSFLIKLSVSEPLTKALPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPVITP 180
           RSFLIKLSV+EPLTK LPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPP+ITP
Sbjct: 121 RSFLIKLSVTEPLTKTLPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPIITP 180

Query: 181 IKSMNSQPLSLQLYLEHPSLSEPKPCE 208
           IKSMNSQPLSLQLYLEHPSLSEPKPCE
Sbjct: 181 IKSMNSQPLSLQLYLEHPSLSEPKPCE 207

BLAST of Lcy07g013640 vs. ExPASy TrEMBL
Match: A0A6J1G7Q4 (DNA polymerase zeta processivity subunit isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451503 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 5.2e-108
Identity = 202/216 (93.52%), Postives = 205/216 (94.91%), Query Frame = 0

Query: 1   MDSRDNKVPPQGETVQILVEFLEVAITSIVFLKGIYPSG---------AFERRRYMNAVV 60
           MDSRDNKV PQGETVQILVEFLEVAITSIVFLKGIYPSG         AFERRRYMNAVV
Sbjct: 1   MDSRDNKVAPQGETVQILVEFLEVAITSIVFLKGIYPSGAILSLICLCAFERRRYMNAVV 60

Query: 61  QRARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLMVNQSYESKV 120
           QRARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKL+VNQSYESKV
Sbjct: 61  QRARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLIVNQSYESKV 120

Query: 121 ENSDLEFALRSFLIKLSVSEPLTKALPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQ 180
           ENSDLEFALRSFLIKLSV+EPLTK LPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQ
Sbjct: 121 ENSDLEFALRSFLIKLSVTEPLTKTLPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQ 180

Query: 181 WQQPPVITPIKSMNSQPLSLQLYLEHPSLSEPKPCE 208
           WQQPP+ITPIKSMNSQPLSLQLYLEHPSLSEPKPCE
Sbjct: 181 WQQPPIITPIKSMNSQPLSLQLYLEHPSLSEPKPCE 216

BLAST of Lcy07g013640 vs. ExPASy TrEMBL
Match: A0A6J1I0B4 (DNA polymerase zeta processivity subunit isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469702 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.0e-107
Identity = 198/207 (95.65%), Postives = 203/207 (98.07%), Query Frame = 0

Query: 1   MDSRDNKVPPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60
           MDSRDNKV PQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ
Sbjct: 1   MDSRDNKVTPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLMVNQSYESKVENSDLEFAL 120
           DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKL+VNQSY+SKVENSDLEFAL
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLIVNQSYKSKVENSDLEFAL 120

Query: 121 RSFLIKLSVSEPLTKALPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPVITP 180
           RSFLIKLSV+EPLTK LP DCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPP+ITP
Sbjct: 121 RSFLIKLSVTEPLTKTLPTDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPIITP 180

Query: 181 IKSMNSQPLSLQLYLEHPSLSEPKPCE 208
           IKSM+SQPLSLQLYLEHPSLSEPK CE
Sbjct: 181 IKSMHSQPLSLQLYLEHPSLSEPKSCE 207

BLAST of Lcy07g013640 vs. ExPASy TrEMBL
Match: A0A6J1I6U9 (DNA polymerase zeta processivity subunit isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469702 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.1e-105
Identity = 198/216 (91.67%), Postives = 203/216 (93.98%), Query Frame = 0

Query: 1   MDSRDNKVPPQGETVQILVEFLEVAITSIVFLKGIYPSG---------AFERRRYMNAVV 60
           MDSRDNKV PQGETVQILVEFLEVAITSIVFLKGIYPSG         AFERRRYMNAVV
Sbjct: 1   MDSRDNKVTPQGETVQILVEFLEVAITSIVFLKGIYPSGAILSLICLCAFERRRYMNAVV 60

Query: 61  QRARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLMVNQSYESKV 120
           QRARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKL+VNQSY+SKV
Sbjct: 61  QRARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLIVNQSYKSKV 120

Query: 121 ENSDLEFALRSFLIKLSVSEPLTKALPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQ 180
           ENSDLEFALRSFLIKLSV+EPLTK LP DCKWEITAYFQTLPSSGTSKDAELWIPTDTKQ
Sbjct: 121 ENSDLEFALRSFLIKLSVTEPLTKTLPTDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQ 180

Query: 181 WQQPPVITPIKSMNSQPLSLQLYLEHPSLSEPKPCE 208
           WQQPP+ITPIKSM+SQPLSLQLYLEHPSLSEPK CE
Sbjct: 181 WQQPPIITPIKSMHSQPLSLQLYLEHPSLSEPKSCE 216

BLAST of Lcy07g013640 vs. ExPASy TrEMBL
Match: A0A6J1D766 (DNA polymerase zeta processivity subunit OS=Momordica charantia OX=3673 GN=LOC111017977 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.0e-103
Identity = 192/205 (93.66%), Postives = 197/205 (96.10%), Query Frame = 0

Query: 1   MDSRDNKVPPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60
           MD RDNKVPPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQ ARHPELQ
Sbjct: 1   MDCRDNKVPPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQMARHPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLMVNQSYESKVENSDLEFAL 120
           DYIHSTVSGL+PFIQKGLVERVAVIFFNGENI VE F+FKLMVNQSYESKVE+SDLEFAL
Sbjct: 61  DYIHSTVSGLVPFIQKGLVERVAVIFFNGENIPVESFIFKLMVNQSYESKVEDSDLEFAL 120

Query: 121 RSFLIKLSVSEPLTKALPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPVITP 180
           RSFLIKLSVS PLTK LPPDC+WEITAYF+ LPSS TSKDAELWIPTDTKQWQQPPVITP
Sbjct: 121 RSFLIKLSVSGPLTKVLPPDCRWEITAYFKMLPSSSTSKDAELWIPTDTKQWQQPPVITP 180

Query: 181 IKSMNSQPLSLQLYLEHPSLSEPKP 206
           IKSMNSQPLSLQLYLEHPSLSEPKP
Sbjct: 181 IKSMNSQPLSLQLYLEHPSLSEPKP 205

BLAST of Lcy07g013640 vs. NCBI nr
Match: XP_022947726.1 (DNA polymerase zeta processivity subunit isoform X2 [Cucurbita moschata] >XP_022947728.1 DNA polymerase zeta processivity subunit isoform X2 [Cucurbita moschata] >KAG7034853.1 DNA polymerase zeta processivity subunit [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 407.9 bits (1047), Expect = 5.2e-110
Identity = 202/207 (97.58%), Postives = 205/207 (99.03%), Query Frame = 0

Query: 1   MDSRDNKVPPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60
           MDSRDNKV PQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ
Sbjct: 1   MDSRDNKVAPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLMVNQSYESKVENSDLEFAL 120
           DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKL+VNQSYESKVENSDLEFAL
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLIVNQSYESKVENSDLEFAL 120

Query: 121 RSFLIKLSVSEPLTKALPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPVITP 180
           RSFLIKLSV+EPLTK LPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPP+ITP
Sbjct: 121 RSFLIKLSVTEPLTKTLPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPIITP 180

Query: 181 IKSMNSQPLSLQLYLEHPSLSEPKPCE 208
           IKSMNSQPLSLQLYLEHPSLSEPKPCE
Sbjct: 181 IKSMNSQPLSLQLYLEHPSLSEPKPCE 207

BLAST of Lcy07g013640 vs. NCBI nr
Match: XP_023532096.1 (DNA polymerase zeta processivity subunit isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532097.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532098.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita pepo subsp. pepo] >XP_023532099.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-109
Identity = 201/207 (97.10%), Postives = 205/207 (99.03%), Query Frame = 0

Query: 1   MDSRDNKVPPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60
           MDSRDNKV PQGETV+ILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ
Sbjct: 1   MDSRDNKVAPQGETVKILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLMVNQSYESKVENSDLEFAL 120
           DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKL+VNQSYESKVENSDLEFAL
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLIVNQSYESKVENSDLEFAL 120

Query: 121 RSFLIKLSVSEPLTKALPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPVITP 180
           RSFLIKLSV+EPLTK LPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPP+ITP
Sbjct: 121 RSFLIKLSVTEPLTKTLPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPIITP 180

Query: 181 IKSMNSQPLSLQLYLEHPSLSEPKPCE 208
           IKSMNSQPLSLQLYLEHPSLSEPKPCE
Sbjct: 181 IKSMNSQPLSLQLYLEHPSLSEPKPCE 207

BLAST of Lcy07g013640 vs. NCBI nr
Match: XP_022947722.1 (DNA polymerase zeta processivity subunit isoform X1 [Cucurbita moschata] >XP_022947723.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita moschata] >XP_022947724.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita moschata] >XP_022947725.1 DNA polymerase zeta processivity subunit isoform X1 [Cucurbita moschata])

HSP 1 Score: 400.2 bits (1027), Expect = 1.1e-107
Identity = 202/216 (93.52%), Postives = 205/216 (94.91%), Query Frame = 0

Query: 1   MDSRDNKVPPQGETVQILVEFLEVAITSIVFLKGIYPSG---------AFERRRYMNAVV 60
           MDSRDNKV PQGETVQILVEFLEVAITSIVFLKGIYPSG         AFERRRYMNAVV
Sbjct: 1   MDSRDNKVAPQGETVQILVEFLEVAITSIVFLKGIYPSGAILSLICLCAFERRRYMNAVV 60

Query: 61  QRARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLMVNQSYESKV 120
           QRARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKL+VNQSYESKV
Sbjct: 61  QRARHPELQDYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLIVNQSYESKV 120

Query: 121 ENSDLEFALRSFLIKLSVSEPLTKALPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQ 180
           ENSDLEFALRSFLIKLSV+EPLTK LPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQ
Sbjct: 121 ENSDLEFALRSFLIKLSVTEPLTKTLPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQ 180

Query: 181 WQQPPVITPIKSMNSQPLSLQLYLEHPSLSEPKPCE 208
           WQQPP+ITPIKSMNSQPLSLQLYLEHPSLSEPKPCE
Sbjct: 181 WQQPPIITPIKSMNSQPLSLQLYLEHPSLSEPKPCE 216

BLAST of Lcy07g013640 vs. NCBI nr
Match: XP_038900295.1 (DNA polymerase zeta processivity subunit [Benincasa hispida] >XP_038900296.1 DNA polymerase zeta processivity subunit [Benincasa hispida])

HSP 1 Score: 399.4 bits (1025), Expect = 1.8e-107
Identity = 197/207 (95.17%), Postives = 202/207 (97.58%), Query Frame = 0

Query: 1   MDSRDNKVPPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60
           MDSRD KVPPQGE VQILVEFLEVAITS+VFLKGIYPSGAFERRRYMNAVVQ+ARHPELQ
Sbjct: 1   MDSRDIKVPPQGEIVQILVEFLEVAITSVVFLKGIYPSGAFERRRYMNAVVQKARHPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLMVNQSYESKVENSDLEFAL 120
           DYIHSTVSGLLPFIQKGLVERVAVIFFNG+N+QVERFVFKL VNQSYESKVENSDLEFAL
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGDNVQVERFVFKLTVNQSYESKVENSDLEFAL 120

Query: 121 RSFLIKLSVSEPLTKALPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPVITP 180
           R+FLIKLSVSEPLTK LPPDCKWEITAYFQTLPSSGTSKDAE WIPTDTKQWQQPPVITP
Sbjct: 121 RAFLIKLSVSEPLTKVLPPDCKWEITAYFQTLPSSGTSKDAESWIPTDTKQWQQPPVITP 180

Query: 181 IKSMNSQPLSLQLYLEHPSLSEPKPCE 208
           IKSMNSQPLSLQLYLEHPSLSEPKPCE
Sbjct: 181 IKSMNSQPLSLQLYLEHPSLSEPKPCE 207

BLAST of Lcy07g013640 vs. NCBI nr
Match: XP_022970852.1 (DNA polymerase zeta processivity subunit isoform X2 [Cucurbita maxima] >XP_022970853.1 DNA polymerase zeta processivity subunit isoform X2 [Cucurbita maxima])

HSP 1 Score: 398.3 bits (1022), Expect = 4.1e-107
Identity = 198/207 (95.65%), Postives = 203/207 (98.07%), Query Frame = 0

Query: 1   MDSRDNKVPPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60
           MDSRDNKV PQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ
Sbjct: 1   MDSRDNKVTPQGETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQ 60

Query: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLMVNQSYESKVENSDLEFAL 120
           DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKL+VNQSY+SKVENSDLEFAL
Sbjct: 61  DYIHSTVSGLLPFIQKGLVERVAVIFFNGENIQVERFVFKLIVNQSYKSKVENSDLEFAL 120

Query: 121 RSFLIKLSVSEPLTKALPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPVITP 180
           RSFLIKLSV+EPLTK LP DCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPP+ITP
Sbjct: 121 RSFLIKLSVTEPLTKTLPTDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPIITP 180

Query: 181 IKSMNSQPLSLQLYLEHPSLSEPKPCE 208
           IKSM+SQPLSLQLYLEHPSLSEPK CE
Sbjct: 181 IKSMHSQPLSLQLYLEHPSLSEPKSCE 207

BLAST of Lcy07g013640 vs. TAIR 10
Match: AT1G16590.1 (DNA-binding HORMA family protein )

HSP 1 Score: 288.5 bits (737), Expect = 4.3e-78
Identity = 137/192 (71.35%), Postives = 163/192 (84.90%), Query Frame = 0

Query: 12  GETVQILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPELQDYIHSTVSGLL 71
           GE  + LV+F+EVAIT IV+LKG YPS AFERRRYMN VVQRARHPEL+DYIHS  SGLL
Sbjct: 10  GEVGRTLVDFMEVAITMIVYLKGFYPSAAFERRRYMNVVVQRARHPELRDYIHSAASGLL 69

Query: 72  PFIQKGLVERVAVIFFNGENIQVERFVFKLMVNQSYESKVENSDLEFALRSFLIKLSVSE 131
           PFI+KGLVERVAV+FF+ +N+ VERF+FK+ +  S  + VE   LEFALRSFLIKLSVS+
Sbjct: 70  PFIEKGLVERVAVVFFSEDNVPVERFIFKITIKPSCAALVEEGQLEFALRSFLIKLSVSK 129

Query: 132 PLTKALPPDCKWEITAYFQTLPSSGTSKDAELWIPTDTKQWQQPPVITPIKSMNSQPLSL 191
            L K LP +C+WE+TAY ++LP  G+SK+AELWIPTDTKQWQ PPV+TP+KS+NS+PL L
Sbjct: 130 SLVKPLPLNCRWEVTAYLRSLPQVGSSKEAELWIPTDTKQWQNPPVLTPVKSLNSEPLCL 189

Query: 192 QLYLEHPSLSEP 204
           QLYLEHPSLSEP
Sbjct: 190 QLYLEHPSLSEP 201

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q94FL56.0e-7771.35DNA polymerase zeta processivity subunit OS=Arabidopsis thaliana OX=3702 GN=REV7... [more]
Q8QFR43.8e-2334.92Mitotic spindle assembly checkpoint protein MAD2B OS=Xenopus laevis OX=8355 GN=m... [more]
Q568H38.5e-2334.22Mitotic spindle assembly checkpoint protein MAD2B OS=Danio rerio OX=7955 GN=mad2... [more]
Q28H858.5e-2334.92Mitotic spindle assembly checkpoint protein MAD2B OS=Xenopus tropicalis OX=8364 ... [more]
Q4KWZ61.9e-2233.86Mitotic spindle assembly checkpoint protein MAD2B OS=Gallus gallus OX=9031 GN=MA... [more]
Match NameE-valueIdentityDescription
A0A6J1G7902.5e-11097.58DNA polymerase zeta processivity subunit isoform X2 OS=Cucurbita moschata OX=366... [more]
A0A6J1G7Q45.2e-10893.52DNA polymerase zeta processivity subunit isoform X1 OS=Cucurbita moschata OX=366... [more]
A0A6J1I0B42.0e-10795.65DNA polymerase zeta processivity subunit isoform X2 OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1I6U94.1e-10591.67DNA polymerase zeta processivity subunit isoform X1 OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1D7661.0e-10393.66DNA polymerase zeta processivity subunit OS=Momordica charantia OX=3673 GN=LOC11... [more]
Match NameE-valueIdentityDescription
XP_022947726.15.2e-11097.58DNA polymerase zeta processivity subunit isoform X2 [Cucurbita moschata] >XP_022... [more]
XP_023532096.11.5e-10997.10DNA polymerase zeta processivity subunit isoform X1 [Cucurbita pepo subsp. pepo]... [more]
XP_022947722.11.1e-10793.52DNA polymerase zeta processivity subunit isoform X1 [Cucurbita moschata] >XP_022... [more]
XP_038900295.11.8e-10795.17DNA polymerase zeta processivity subunit [Benincasa hispida] >XP_038900296.1 DNA... [more]
XP_022970852.14.1e-10795.65DNA polymerase zeta processivity subunit isoform X2 [Cucurbita maxima] >XP_02297... [more]
Match NameE-valueIdentityDescription
AT1G16590.14.3e-7871.35DNA-binding HORMA family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036570HORMA domain superfamilyGENE3D3.30.900.10HORMA domaincoord: 10..199
e-value: 2.4E-46
score: 159.8
IPR036570HORMA domain superfamilySUPERFAMILY56019The spindle assembly checkpoint protein mad2coord: 13..195
IPR003511HORMA domainPFAMPF02301HORMAcoord: 16..113
e-value: 6.2E-8
score: 32.5
IPR003511HORMA domainPROSITEPS50815HORMAcoord: 12..195
score: 33.818676
IPR045091Mad2-likePANTHERPTHR11842MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2coord: 1..200
NoneNo IPR availablePANTHERPTHR11842:SF10MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2Bcoord: 1..200

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g013640.1Lcy07g013640.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006974 cellular response to DNA damage stimulus
biological_process GO:0010224 response to UV-B
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016035 zeta DNA polymerase complex