Lcy07g012180 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g012180
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Calcium-binding EF-hand family protein
Location	Chr07: 41426941 .. 41427708 (-)
RNA-Seq Expression	Lcy07g012180
Synteny	Lcy07g012180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCAATTGCAGTCCCGTTGAGGCAACGAGAGTCTTTTCTGTCGCTGTGCTGTCAAATGCTGAAGGGATCCCATGACCCCCAATTTCTGCGTCTTTTCTTCTTCCCCTTCTTCTCACCTTATATATAACACTTTTAGCTTCCATTTTTCTTTGCCACCAAACTTCACAAATATTCACTGCTCTCATCTCCAGCTCCAGCTCCCTTTATTTTCATCAATATAATGGCCAGAAAGGCTGCTGCTTTCCACGATTTGCTGCCGGTAATGGCAGAGAAATTGGGGGGAGAGGGGCTGATTAACGAGCTGTGTAATGGGTTTCGGCTGCTGATGGACAAGGACAAGGGCGTCATCACGTTGGACAGCCTTAGGAGAAACTCTTCGCTTTTGGGTCTGCCGGACATGGCAGAGGAGGAGCTTCTCAGCATGATGAGGGAGGGTGACTTGGACGGCGACGGCGCTTTGAATCAGATGGAGTTTTGTGTTTTGATGTTCAGATTAAGCCCTGAGTTGATGGAGGAATCTTTGTATTGGCTTGAACACGCTTTCGACCAGGACTTTAAGACGTCTTGATTTTTTCCTTTTGGAAGAAGAAGAATCAGTCACAGAACGGAACGCCCATGGCTAGGCTAGTTGAATGAAATGACGTCGTTTTGAAGTGAGGAATAGGAAGCTTCTGCCTTTCCAATTATTCCAAGCGTCGCTGATCTGCTATTCCGTTGTATGTCCATAACTCCTAAACAGAAAATAAACTAATGGAAACAGTTCATTTT

mRNA sequence

TGCAATTGCAGTCCCGTTGAGGCAACGAGAGTCTTTTCTGTCGCTGTGCTGTCAAATGCTGAAGGGATCCCATGACCCCCAATTTCTGCGTCTTTTCTTCTTCCCCTTCTTCTCACCTTATATATAACACTTTTAGCTTCCATTTTTCTTTGCCACCAAACTTCACAAATATTCACTGCTCTCATCTCCAGCTCCAGCTCCCTTTATTTTCATCAATATAATGGCCAGAAAGGCTGCTGCTTTCCACGATTTGCTGCCGGTAATGGCAGAGAAATTGGGGGGAGAGGGGCTGATTAACGAGCTGTGTAATGGGTTTCGGCTGCTGATGGACAAGGACAAGGGCGTCATCACGTTGGACAGCCTTAGGAGAAACTCTTCGCTTTTGGGTCTGCCGGACATGGCAGAGGAGGAGCTTCTCAGCATGATGAGGGAGGGTGACTTGGACGGCGACGGCGCTTTGAATCAGATGGAGTTTTGTGTTTTGATGTTCAGATTAAGCCCTGAGTTGATGGAGGAATCTTTGTATTGGCTTGAACACGCTTTCGACCAGGACTTTAAGACGTCTTGATTTTTTCCTTTTGGAAGAAGAAGAATCAGTCACAGAACGGAACGCCCATGGCTAGGCTAGTTGAATGAAATGACGTCGTTTTGAAGTGAGGAATAGGAAGCTTCTGCCTTTCCAATTATTCCAAGCGTCGCTGATCTGCTATTCCGTTGTATGTCCATAACTCCTAAACAGAAAATAAACTAATGGAAACAGTTCATTTT

Coding sequence (CDS)

ATGGCCAGAAAGGCTGCTGCTTTCCACGATTTGCTGCCGGTAATGGCAGAGAAATTGGGGGGAGAGGGGCTGATTAACGAGCTGTGTAATGGGTTTCGGCTGCTGATGGACAAGGACAAGGGCGTCATCACGTTGGACAGCCTTAGGAGAAACTCTTCGCTTTTGGGTCTGCCGGACATGGCAGAGGAGGAGCTTCTCAGCATGATGAGGGAGGGTGACTTGGACGGCGACGGCGCTTTGAATCAGATGGAGTTTTGTGTTTTGATGTTCAGATTAAGCCCTGAGTTGATGGAGGAATCTTTGTATTGGCTTGAACACGCTTTCGACCAGGACTTTAAGACGTCTTGA

Protein sequence

MARKAAAFHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSLLGLPDMAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDFKTS

Homology

[Close]

BLAST of Lcy07g012180 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.3e-32
Identity = 67/106 (63.21%), Postives = 84/106 (79.25%), Query Frame = 0


Query: 8   FHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRN-SSLLGLPDMAEEELL 67
           FHD LP MA  LGGEGLI ELCNGF LLMD++KGVIT +SLRRN +++LGL D+ +E++ 
Sbjct: 19  FHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDVR 78

Query: 68  SMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDF 113
            M++EGD D DGALNQMEFCVLMFRLSP+LME S   +    +++F
Sbjct: 79  CMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]

BLAST of Lcy07g012180 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.8e-31
Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = 0


Query: 8   FHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRN-SSLLGLPDMAEEELL 67
           F D  P MA KLGGEGLI E+C GF LLMDKDKGVIT +SLRRN S++LGL D+ ++++ 
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 68  SMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDF 113
            M+ EGD D DGALNQMEFCVLMFRLSPELME S   +    +++F
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of Lcy07g012180 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-29
Identity = 61/104 (58.65%), Postives = 80/104 (76.92%), Query Frame = 0


Query: 8   FHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSLLGLPDMAEEELLS 67
           + D+LPVMAEK+  E  ++ELC GF LL D ++ +IT +SLRRNS +LG+  M++E+   
Sbjct: 22  YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81

Query: 68  MMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQD 112
           M+REGDLDGDGALNQ EFCVLM RLSPE+ME++  WLE A  Q+
Sbjct: 82  MVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

[Close]

BLAST of Lcy07g012180 vs. ExPASy Swiss-Prot
Match: Q12798 (Centrin-1 OS=Homo sapiens OX=9606 GN=CETN1 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-08
Identity = 32/87 (36.78%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 7   AFHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSLLGLPDMAEEELL 66
           +F+D L VM +K+  +    E+   FRL  D + G I+  +L+R ++ LG  ++ +EEL 
Sbjct: 85  SFNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELG-ENLTDEELQ 144

Query: 67  SMMREGDLDGDGALNQMEFCVLMFRLS 94
            M+ E D DGDG +N+ EF  +M + S
Sbjct: 145 EMIDEADRDGDGEVNEEEFLRIMKKTS 170

[Close]

BLAST of Lcy07g012180 vs. ExPASy Swiss-Prot
Match: P41209 (Centrin-1 OS=Mus musculus OX=10090 GN=Cetn1 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.3e-08
Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 7   AFHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSLLGLPDMAEEELL 66
           +F+D L VM +K+  +    E+   FRL  D + G I+  +L+R ++ LG   + +EEL 
Sbjct: 85  SFNDFLAVMTQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELG-ESLTDEELQ 144

Query: 67  SMMREGDLDGDGALNQMEFCVLM 90
            M+ E D DGDG +N+ EF  +M
Sbjct: 145 EMIDEADRDGDGEVNEEEFLKIM 166

[Close]

BLAST of Lcy07g012180 vs. ExPASy TrEMBL
Match: A0A6J1FW37 (calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111449023 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46
Identity = 98/121 (80.99%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 1   MARK------AAAFHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSL 60
           MARK         FHDLLPVMAEKLGGEGLINELCNGF++LMDK+KGVITL+SLRRNSSL
Sbjct: 1   MARKGGGGGGGGGFHDLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRRNSSL 60

Query: 61  LGLPDMAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDFKT 116
           LGL DM EEEL+SMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWL+ A +++FK 
Sbjct: 61  LGLWDMGEEELVSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEFKA 120

[Close]

BLAST of Lcy07g012180 vs. ExPASy TrEMBL
Match: A0A6J1JGE3 (calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111484150 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.4e-46
Identity = 98/122 (80.33%), Postives = 107/122 (87.70%), Query Frame = 0


Query: 1   MARK-------AAAFHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSS 60
           MARK          FHDLLPVMAEKLGGEGLINELCNGF++LMDK+KGVITL+SLRRNSS
Sbjct: 1   MARKGGGGGGGGGGFHDLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRRNSS 60

Query: 61  LLGLPDMAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDFK 116
           LLGL DM EEEL+SMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWL+ A +++FK
Sbjct: 61  LLGLWDMGEEELVSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEFK 120

[Close]

BLAST of Lcy07g012180 vs. ExPASy TrEMBL
Match: A0A6J1HZZ8 (calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111469641 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.1e-46
Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MARKAAAFHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSLLGLPDM 60
           MARK+AAFHDLLPVMAE+LGGEGLINELCNGF+LLMDK+KGVITLDSLR NSSLLGL DM
Sbjct: 1   MARKSAAFHDLLPVMAEQLGGEGLINELCNGFQLLMDKEKGVITLDSLRLNSSLLGLRDM 60

Query: 61  AEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDFKT 115
            E ELLSMM EGDLDGDGALNQMEFCVLMFRLSPELM+ SLY L+HA    FKT
Sbjct: 61  GEAELLSMMTEGDLDGDGALNQMEFCVLMFRLSPELMQHSLYCLQHASHHQFKT 114

[Close]

BLAST of Lcy07g012180 vs. ExPASy TrEMBL
Match: A0A6J1G6H5 (calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111451279 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.4e-46
Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 0


Query: 1   MARKAAAFHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSLLGLPDM 60
           MARK+AAFHDLLPVMAE+LGGEGLINELCNGF+LLMDK+KGVITLDSLR NSSLLGL DM
Sbjct: 1   MARKSAAFHDLLPVMAEQLGGEGLINELCNGFQLLMDKEKGVITLDSLRLNSSLLGLRDM 60

Query: 61  AEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDFKT 115
            E ELLSMM EGDLDGDGALNQMEFCVLMFRLSPELME SL +L+HAF    KT
Sbjct: 61  GEAELLSMMTEGDLDGDGALNQMEFCVLMFRLSPELMEHSLSFLQHAFHNQLKT 114

[Close]

BLAST of Lcy07g012180 vs. ExPASy TrEMBL
Match: A0A5N6RD48 (EF-hand domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_014485 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.1e-42
Identity = 86/110 (78.18%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 4   KAAAFHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSLLGLPDMAEE 63
           K A F DLLPVMA+KLGG+GLI ELCNGF+LLMDKDKGVITLDSLRRNS+LLGL D+ E+
Sbjct: 6   KGAVFEDLLPVMADKLGGDGLIRELCNGFQLLMDKDKGVITLDSLRRNSALLGLQDLKED 65

Query: 64  ELLSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDFK 114
           EL+SM++EGDLDGDGALNQMEFCVLMFRLSPELME+S +WLE A +++ K
Sbjct: 66  ELVSMVKEGDLDGDGALNQMEFCVLMFRLSPELMEDSHFWLEEAVEEELK 115

[Close]

BLAST of Lcy07g012180 vs. NCBI nr
Match: KAG6570861.1 (Calcium-binding protein KRP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.8 bits (499), Expect = 1.0e-46
Identity = 98/118 (83.05%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MARK---AAAFHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSLLGL 60
           MARK      FHDLLPVMAEKLGGEGLINELCNGF++LMDK+KGVITL+SLRRNSSLLGL
Sbjct: 1   MARKGGGGGGFHDLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRRNSSLLGL 60

Query: 61  PDMAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDFKTS 116
            DM EEEL+SMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWL+ A +++FK S
Sbjct: 61  WDMGEEELVSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEFKAS 118

[Close]

BLAST of Lcy07g012180 vs. NCBI nr
Match: XP_022944617.1 (calcium-binding protein PBP1-like [Cucurbita moschata] >KAG7010710.1 Calcium-binding protein PBP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.7 bits (496), Expect = 2.2e-46
Identity = 98/121 (80.99%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 1   MARK------AAAFHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSL 60
           MARK         FHDLLPVMAEKLGGEGLINELCNGF++LMDK+KGVITL+SLRRNSSL
Sbjct: 1   MARKGGGGGGGGGFHDLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRRNSSL 60

Query: 61  LGLPDMAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDFKT 116
           LGL DM EEEL+SMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWL+ A +++FK 
Sbjct: 61  LGLWDMGEEELVSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEFKA 120

[Close]

BLAST of Lcy07g012180 vs. NCBI nr
Match: XP_023533208.1 (calcium-binding protein PBP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.7 bits (496), Expect = 2.2e-46
Identity = 98/114 (85.96%), Postives = 104/114 (91.23%), Query Frame = 0


Query: 1   MARKAAAFHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSLLGLPDM 60
           MARK+AAFHDLLPVMAE+LGGEGLINELCNGF+LLMDK+KGVITLDSLR NSSLLGL DM
Sbjct: 1   MARKSAAFHDLLPVMAEQLGGEGLINELCNGFQLLMDKEKGVITLDSLRLNSSLLGLRDM 60

Query: 61  AEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDFKT 115
            E ELLSMM EGDLDGDGALNQMEFCVLMFRLSPELME SL +L+HAF   FKT
Sbjct: 61  GEAELLSMMTEGDLDGDGALNQMEFCVLMFRLSPELMEHSLSFLQHAFHNQFKT 114

[Close]

BLAST of Lcy07g012180 vs. NCBI nr
Match: XP_022986403.1 (calcium-binding protein PBP1-like [Cucurbita maxima])

HSP 1 Score: 195.3 bits (495), Expect = 2.9e-46
Identity = 98/122 (80.33%), Postives = 107/122 (87.70%), Query Frame = 0


Query: 1   MARK-------AAAFHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSS 60
           MARK          FHDLLPVMAEKLGGEGLINELCNGF++LMDK+KGVITL+SLRRNSS
Sbjct: 1   MARKGGGGGGGGGGFHDLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRRNSS 60

Query: 61  LLGLPDMAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDFK 116
           LLGL DM EEEL+SMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWL+ A +++FK
Sbjct: 61  LLGLWDMGEEELVSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEFK 120

[Close]

BLAST of Lcy07g012180 vs. NCBI nr
Match: XP_023512862.1 (calcium-binding protein PBP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.5 bits (493), Expect = 5.0e-46
Identity = 97/118 (82.20%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 1   MARK---AAAFHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSLLGL 60
           MARK      FHDLLPVMAEKLGGEGLINELCNGF++LMDK+KGVITL+SLR NSSLLGL
Sbjct: 1   MARKGGGGGGFHDLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRTNSSLLGL 60

Query: 61  PDMAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDFKTS 116
            DM EEEL+SMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWL+ A +++FK S
Sbjct: 61  WDMGEEELVSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEFKAS 118

[Close]

BLAST of Lcy07g012180 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 139.0 bits (349), Expect = 2.3e-33
Identity = 67/106 (63.21%), Postives = 84/106 (79.25%), Query Frame = 0


Query: 8   FHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRN-SSLLGLPDMAEEELL 67
           FHD LP MA  LGGEGLI ELCNGF LLMD++KGVIT +SLRRN +++LGL D+ +E++ 
Sbjct: 19  FHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDVR 78

Query: 68  SMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDF 113
            M++EGD D DGALNQMEFCVLMFRLSP+LME S   +    +++F
Sbjct: 79  CMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]

BLAST of Lcy07g012180 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 )

HSP 1 Score: 136.0 bits (341), Expect = 2.0e-32
Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = 0


Query: 8   FHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRN-SSLLGLPDMAEEELL 67
           F D  P MA KLGGEGLI E+C GF LLMDKDKGVIT +SLRRN S++LGL D+ ++++ 
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 68  SMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQDF 113
            M+ EGD D DGALNQMEFCVLMFRLSPELME S   +    +++F
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of Lcy07g012180 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.1e-30
Identity = 61/104 (58.65%), Postives = 80/104 (76.92%), Query Frame = 0


Query: 8   FHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSLLGLPDMAEEELLS 67
           + D+LPVMAEK+  E  ++ELC GF LL D ++ +IT +SLRRNS +LG+  M++E+   
Sbjct: 22  YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81

Query: 68  MMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQD 112
           M+REGDLDGDGALNQ EFCVLM RLSPE+ME++  WLE A  Q+
Sbjct: 82  MVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

[Close]

BLAST of Lcy07g012180 vs. TAIR 10
Match: AT4G23650.1 (calcium-dependent protein kinase 6 )

HSP 1 Score: 52.0 bits (123), Expect = 3.7e-07
Identity = 33/100 (33.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 12  LPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSLLGLPDMAEEELLSMMRE 71
           L V+AE L  E +I  L   F+ L   + G++TL+ LR     LG   ++E E+  +M  
Sbjct: 369 LKVIAENLSEEEIIG-LKEMFKSLDTDNNGIVTLEELRTGLPKLG-SKISEAEIRQLMEA 428

Query: 72  GDLDGDGALNQMEFCVLMFRLSPELMEESLYWLEHAFDQD 112
            D+DGDG+++ +EF      ++    E+ LY     FD D
Sbjct: 429 ADMDGDGSIDYLEFISATMHMNRIEREDHLYTAFQFFDND 466

[Close]

BLAST of Lcy07g012180 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 )

HSP 1 Score: 48.5 bits (114), Expect = 4.1e-06
Identity = 29/82 (35.37%), Postives = 43/82 (52.44%), Query Frame = 0


Query: 8   FHDLLPVMAEKLGGEGLINELCNGFRLLMDKDKGVITLDSLRRNSSLLGLPDMAEEELLS 67
           F + L +MA+K+       EL   FR+      G I+   LR   + LG   + +EE+  
Sbjct: 66  FPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVEE 125

Query: 68  MMREGDLDGDGALNQMEFCVLM 90
           M+RE D+DGDG +N  EF  +M
Sbjct: 126 MIREADVDGDGQINYEEFVKIM 146

The following BLAST results are available for this feature:

BLAST of Lcy07g012180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81831	3.3e-32	63.21	Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1	[more]
Q9LSQ6	2.8e-31	63.21	Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1	[more]
Q9ZPX9	1.5e-29	58.65	Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2	[more]
Q12798	1.9e-08	36.78	Centrin-1 OS=Homo sapiens OX=9606 GN=CETN1 PE=1 SV=1	[more]
P41209	4.3e-08	37.35	Centrin-1 OS=Mus musculus OX=10090 GN=Cetn1 PE=1 SV=1	[more]

BLAST of Lcy07g012180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FW37	1.1e-46	80.99	calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111449023 ...	[more]
A0A6J1JGE3	1.4e-46	80.33	calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111484150 PE...	[more]
A0A6J1HZZ8	4.1e-46	85.09	calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111469641 PE...	[more]
A0A6J1G6H5	5.4e-46	85.09	calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111451279 ...	[more]
A0A5N6RD48	2.1e-42	78.18	EF-hand domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_014485...	[more]

BLAST of Lcy07g012180 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570861.1	1.0e-46	83.05	Calcium-binding protein KRP1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022944617.1	2.2e-46	80.99	calcium-binding protein PBP1-like [Cucurbita moschata] >KAG7010710.1 Calcium-bin...	[more]
XP_023533208.1	2.2e-46	85.96	calcium-binding protein PBP1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022986403.1	2.9e-46	80.33	calcium-binding protein PBP1-like [Cucurbita maxima]	[more]
XP_023512862.1	5.0e-46	82.20	calcium-binding protein PBP1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy07g012180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27280.1	2.3e-33	63.21	Calcium-binding EF-hand family protein	[more]
AT5G54490.1	2.0e-32	63.21	pinoid-binding protein 1	[more]
AT2G46600.1	1.1e-30	58.65	Calcium-binding EF-hand family protein	[more]
AT4G23650.1	3.7e-07	33.00	calcium-dependent protein kinase 6	[more]
AT1G66410.1	4.1e-06	35.37	calmodulin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 64..92 e-value: 0.0012 score: 28.1
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 40..91 e-value: 3.3E-18 score: 65.2
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 60..95 score: 10.635944
None	No IPR available	GENE3D	1.10.238.10		coord: 6..115 e-value: 4.6E-22 score: 80.1
None	No IPR available	PANTHER	PTHR47319:SF8	CALCIUM-BINDING PROTEIN PBP1-LIKE	coord: 2..113
IPR044205	Calcium-binding protein KIC/PBP1/KRP1	PANTHER	PTHR47319	CALCIUM-BINDING PROTEIN KIC	coord: 2..113
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 73..85
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 24..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g012180.1	Lcy07g012180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding