Lcy07g010120 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g010120
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pre-mRNA-splicing factor SYF2
Location	Chr07: 39046252 .. 39050831 (-)
RNA-Seq Expression	Lcy07g010120
Synteny	Lcy07g010120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAATCTTGTGCAATTGATCTTCTTTCTTCCCAAATCGCGAAGGGAACCTCTCCCCCTTTCTTCTTCGAGTTCTACCCACAAGGAAAACCTAGCTTTCAGGTACAGTTCTACAGCTCTCTCTCAGCGCCAATGAATCTAATATTACTTTTCTCATTGGTTCGCAAGCTTGATTTCGCATGAATTTCGGTTTTGCTTCGCAAGTTTCAACTGGAATCAGTGACAATTTTCATGCTGTTATTTGTTGCTTTTTCTCGCTCGCTTTCTGAGAATTCGAACAAAGAAAAGGATTGTGGTTTTTCCCCCCTTTTTTGGTGTATTTTTTATGCTGTAGTGGACTTGATTATGTGTTATGTTGCTGTCCGTGGTTTCCTTTCCCCAGAAGTTGAATTGTTCTTGTTTACTCTGGAATTGTTTGTGCTCCTTCGAATCCCTCTTGCCAAAAACAAAGACAGATAGAAAAAAAAAAAAAAATCAATTTTCTGTTGGATACACTTTTTGCGCATTGTGTGTTGGGAGAAGTCGAGGATAACTATTGGCGTTGGTTCGATACATTCGGTTAATTTAACAAGATTCAGTTGGAAGTTTGAGTTCTTTTACTCGCTTGATTGATCATGTAACCTTTGTATCCAATGATAGCTTTTATTGTCAAATTTTCTTTTATGGCTTTAAGAATCCAAAATTTTTGTAGATTTTTAAGCTCCGTTTAATTATGACTCTTTATTTGCAGTGTTTTATTGGGTAGAGAAGTTGTTGCTGAAATGACTGATGAAGGAAGAGTACACCCGGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAATAATAGCTGAAGTCAAAGCCCGGAATCAGCACAATGAGCCAGGTTTTATGACATGTTACAATTTCTTTGCAATTACCTTGAACATCATGACCTTCTCTAATTGTTGCTAACAATTTCATTCCCCATCACTATTTACCCTTTTGTCTAATTTGTTAATGTTCTCTTGGAATCACTTATTTCTTCAACATTGCTCAAAATTGGATCTGTAAATTGCTTAATCATCTTTTATTCCCTCCTCCACCTTTCAAATTCAGATGATGTTATTTGTTATCGGCCACTCTTATCTCATATAAACTTTTTCTTGTGAATTGTGATCACAGTTCCCATTTCATCAGAAGCCGTTCAAGCTGGTAGAAGTGGTGGTTCTTCCAATTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGATGAAGAAGGGCACAGTGACGGTGATATTGACAAATTTAGTGGTGGGGAGACTGTGGAAGGAGACTTCACACAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTAAGGCTTAAGATGGTAATTTTCTATATTTTTTTGAAGTAACAATCAATTACAATCAAGCATCTCGTAATGACTTATGGATGAATGGATGCAGAATGAGGCACGAAAAGCTAATCAGACAGCAATTGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAACTTTTGGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCGGAGTCCAAATATAAGAAATGGGAGAAGGATGCAGCTCCCTATGGATGGGATGGTGAGTCTCTATGTGTACTACGAATGTCATAACACCAATTGAGCAATTCTTGTGCACATGGGCTCTTTTGAATACGTGCAGGTGCAGCTGCACCTATTATGCTGATTGCTGATTTTAGCTGCTTTTTTGTGGACAAATGCATTTTTTTTTTAATAATTTGACAAGGTTCCCTAATATGCTGGTTGATGACGAAAACATGAATTGATTCTAGGATATAGATATTATGTGTTGAGTTGTCAAGGATATTATGCATGCCCATGCCCTAATAGGTGTGTGAACTCTATTGGTGCAATCCTGAATGTGCATTCTATTGAAAGAACTTTTTAATTAAAGTAATGGTCACTTTTTAATTCTTTCTTCTTCACGTAGTATGTTACTCTTTGGGGCTCATTCTTGTAATTAGCTCTTGGGGTCTTGGTTTGTGGGCTTGTTTCTAGCGTTCGGCTTGTTTTTTTGTATGCCATTGTTCTTCCTTTCATTGGTTTCTTATTAAAGAAAATAGCTATAGTGTCCCATGTTTCTCTGTATAAGGAGATTTAAATTGATTGTATAATCATGAATTGTGTTATATTACCATGTAATCACTTTTCTTGGGGGAGGGGAGGGGGAAGGTCTTGGGTATAAAGTTTACTTAATTGGCTGTATTTTATCTATTTGTTGTCAATACTTATCTGAAAAGGTTAAATTGCATTTGTTTTAACAGTCTTTAACCAGAAAACATTGTACAATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGTACTGTTAGTTCCACTGTATAATTTTGACTATATCTGTAAATATTAGATTTCTGAGGATATAGTTCTTGGGCCACTACTCTGCAGTCTCCTAAGGTTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGAGCGGGACGAGAAGCGAAAGTTGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATTGATTCTATCAATGATCGCAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACGCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAAGGTATTGTTTAAATGAGGCTTTGGTTCATAGGTCAAGTCATTTACTAAATGTAACTTTTCTGTTCTCTCTCCCTATGCTTGATGCATGTTTTACTCTTTTATTGTTTTCCACTCTTTGCTGAAGAAGACATGCTTCGTTTTTACCCTTGCCCCCTTTCTCTAATGCGCTGGATATATTTGTCATGAGGAGAGACAACAAAATGTGTCTTCTATGCACTTTCCTCTGCTGAATTACATATTTCTTTTAAACCATGGCTTCCTTAACTTGATTGAATTTTATTTTGTGTTTTTTTTTTTTTTTTTGGTAGGGTTTTTGTGGAACTTATTTGGAATCCTAGTAGTTGGGAGTATTTAAAGCTTTTCTCCTTAGATTTAAAAATGTTCTTCTGTAAAAGATTTCTATGTAAAGCTACAGAATTCTCCTTTAAGTGGTAGAAGATTGTATGCTCATTATTGATTAAAGGTCACTTCTCTTAGATATGTACCATATAGCAATATAATTGACAATAGCACCTCATGGTTGATTGAGGTTGTTTCATTGTGAATACCATATTTCAACAAGTACGAATTACCCCAAATCCAATCAACGTTTATCATTTTTTCCATTTTTTCTCCTTTATTGACAAACATTGGTATGAGGAAGAATAGTTTTGACTTGGGGAATTTTTTAGTGTGAAAGCAAGGCACATGGAGTTCCAAAGGCCCGAAATGCTGTTCTAGCAGCTGCAGCTGCTACTTACAATTCAATCTCATCAAGGTACGGGATAGTTTTCTTCTAAAGCAGTCTACACGGGCCTCCAAGACAGCAAAGAAATACTTCTTAGATTGGTAAGATTACTCATAAATCCTGTAATCACTTGCACACTTCTGAGATAAGTTAAGTCGTCCACCCTTTTGAAACTGGGCTTTTTCTGGGGGGGAAGAGTTTTGTACTTTACAGAAGTTTGGTTTGTTTCCTAACAATTTTAGAGAATGTGGTAGAATCTGTCAAACTTCAAATAGACAGCTTTTAACATGTTAGCTTGAACACATCTCTTTGATAGACGTACTTAATCAATTTCGTGGCCCCTGCAAATTTCTCAAAATGAACTCAGTCCAAAATAGTGTCATATTCGTAATAACACGAGAAGTTTGCAGAGAAACATGAGTAACCCCATATTTCATCCCAGAAAAGCGTCAACATCTTTAAGTAGCAGTGTGTCAATTTCTATGTAAACATGAGTAACCAACCCCATATTTCTTCCTTGGGAGGTGCTCTCTAGATTTTTATTTTTATTTTTTTATTTTTATTTTTTTTTTATTGAAAATAAAGGCATTCAATTAGACAATAAAGTTGTACAACTAACTTCTCCCAATAAAGAGGAAAACCACGCTGGAAAGGTTTCCTTCCAAAAACCCACAAGACAACCCTCTCTTCATATTTCTCCATGGAGGAAAACGTCTGGCCAAAAAATGTACTAGAGACCGCTGCACGAGCTAGGCGATGGGCTGCTCTATTGGTGGCTCAATCGCTCTCTAGATTTTTATTTGGGGTAACTACACAAATTGGTCAATAGTAGCTCATTTATTCCATATTTGTCCTTACCGGTTGACAGAAAAAAAAATAACAGAAATAGAATGTTTAATATACAAAAAATAATACTAAAATAAATTAATAAAGTAAAAGTTACCAAATTTGATAACTAGTTGGTTCATGAAAAAATAAATTAATATTTATTAGAATATC

mRNA sequence

GGAAATCTTGTGCAATTGATCTTCTTTCTTCCCAAATCGCGAAGGGAACCTCTCCCCCTTTCTTCTTCGAGTTCTACCCACAAGGAAAACCTAGCTTTCAGTGTTTTATTGGGTAGAGAAGTTGTTGCTGAAATGACTGATGAAGGAAGAGTACACCCGGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAATAATAGCTGAAGTCAAAGCCCGGAATCAGCACAATGAGCCAGTTCCCATTTCATCAGAAGCCGTTCAAGCTGGTAGAAGTGGTGGTTCTTCCAATTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGATGAAGAAGGGCACAGTGACGGTGATATTGACAAATTTAGTGGTGGGGAGACTGTGGAAGGAGACTTCACACAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTAAGGCTTAAGATGAATGAGGCACGAAAAGCTAATCAGACAGCAATTGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAACTTTTGGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCGGAGTCCAAATATAAGAAATGGGAGAAGGATGCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACATTGTACAATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGTCTCCTAAGGTTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGAGCGGGACGAGAAGCGAAAGTTGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATTGATTCTATCAATGATCGCAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACGCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAAGTGTGAAAGCAAGGCACATGGAGTTCCAAAGGCCCGAAATGCTGTTCTAGCAGCTGCAGCTGCTACTTACAATTCAATCTCATCAAGGTACGGGATAGTTTTCTTCTAAAGCAGTCTACACGGGCCTCCAAGACAGCAAAGAAATACTTCTTAGATTGGTAAGATTACTCATAAATCCTGTAATCACTTGCACACTTCTGAGATAAGTTAAGTCGTCCACCCTTTTGAAACTGGGCTTTTTCTGGGGGGGAAGAGTTTTGTACTTTACAGAAGTTTGGTTTGTTTCCTAACAATTTTAGAGAATGTGGTAGAATCTGTCAAACTTCAAATAGACAGCTTTTAACATGTTAGCTTGAACACATCTCTTTGATAGACGTACTTAATCAATTTCGTGGCCCCTGCAAATTTCTCAAAATGAACTCAGTCCAAAATAGTGTCATATTCGTAATAACACGAGAAGTTTGCAGAGAAACATGAGTAACCCCATATTTCATCCCAGAAAAGCGTCAACATCTTTAAGTAGCAGTGTGTCAATTTCTATGTAAACATGAGTAACCAACCCCATATTTCTTCCTTGGGAGGTGCTCTCTAGATTTTTATTTTTATTTTTTTATTTTTATTTTTTTTTTATTGAAAATAAAGGCATTCAATTAGACAATAAAGTTGTACAACTAACTTCTCCCAATAAAGAGGAAAACCACGCTGGAAAGGTTTCCTTCCAAAAACCCACAAGACAACCCTCTCTTCATATTTCTCCATGGAGGAAAACGTCTGGCCAAAAAATGTACTAGAGACCGCTGCACGAGCTAGGCGATGGGCTGCTCTATTGGTGGCTCAATCGCTCTCTAGATTTTTATTTGGGGTAACTACACAAATTGGTCAATAGTAGCTCATTTATTCCATATTTGTCCTTACCGGTTGACAGAAAAAAAAATAACAGAAATAGAATGTTTAATATACAAAAAATAATACTAAAATAAATTAATAAAGTAAAAGTTACCAAATTTGATAACTAGTTGGTTCATGAAAAAATAAATTAATATTTATTAGAATATC

Coding sequence (CDS)

ATGACTGATGAAGGAAGAGTACACCCGGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAATAATAGCTGAAGTCAAAGCCCGGAATCAGCACAATGAGCCAGTTCCCATTTCATCAGAAGCCGTTCAAGCTGGTAGAAGTGGTGGTTCTTCCAATTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGATGAAGAAGGGCACAGTGACGGTGATATTGACAAATTTAGTGGTGGGGAGACTGTGGAAGGAGACTTCACACAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTAAGGCTTAAGATGAATGAGGCACGAAAAGCTAATCAGACAGCAATTGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAACTTTTGGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCGGAGTCCAAATATAAGAAATGGGAGAAGGATGCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACATTGTACAATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGTCTCCTAAGGTTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGAGCGGGACGAGAAGCGAAAGTTGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATTGATTCTATCAATGATCGCAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACGCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA

Protein sequence

MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNFVPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

Homology

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BLAST of Lcy07g010120 vs. ExPASy Swiss-Prot
Match: Q8AVQ6 (Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.3e-26
Identity = 85/214 (39.72%), Postives = 125/214 (58.41%), Query Frame = 0


Query: 103 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 162
           R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   A
Sbjct: 30  RLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKNEEKK--RECAA 89

Query: 163 NGLDMTKAYMLD-TQEAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEY 222
           NG+D  +A +L+ + E AE   +K ++     G+  +    L   Y++ TK +  D+EEY
Sbjct: 90  NGVDFERAKLLEISAEDAERWERKKKRKNPDLGFSDYAAAQL-RQYQRLTKQIKPDMEEY 149

Query: 223 NKMKESDPEFYREASSLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDID 282
              KE   E +   S   Y  +   S+  ID MV +L+++ EKR+ +SRRR +++D DID
Sbjct: 150 EMEKEKQGELFYPTSDSLYHGTHVPSQSGIDRMVTDLEKQIEKREKYSRRRAYNDDADID 209

Query: 283 SINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
            IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 210 YINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 240

[Close]

BLAST of Lcy07g010120 vs. ExPASy Swiss-Prot
Match: Q28G05 (Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-25
Identity = 84/214 (39.25%), Postives = 125/214 (58.41%), Query Frame = 0


Query: 103 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 162
           R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +   A
Sbjct: 39  RLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKEEEKK--RECAA 98

Query: 163 NGLDMTKAYMLD-TQEAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEY 222
           NG+D  +A +L+ + E AE   +K ++     G+  +    L   Y++ TK +  D+EEY
Sbjct: 99  NGVDYERAKLLEISAEDAERWERKKKRKNPDLGFSDYAAAQL-RQYQRLTKQIKPDMEEY 158

Query: 223 NKMKESDPEFYREASSLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDID 282
              K+   E +   S   Y  +   S+  ID MV +L+++ EKR+ +SRRR +++D DID
Sbjct: 159 EMEKQKQGEMFYPTSESLYHGTHIPSQSGIDRMVTDLEKQIEKREKYSRRRAYNDDADID 218

Query: 283 SINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
            IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 219 YINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]

BLAST of Lcy07g010120 vs. ExPASy Swiss-Prot
Match: Q6DV01 (Pre-mRNA-splicing factor syf2 OS=Gekko japonicus OX=146911 GN=syf2 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.3e-24
Identity = 82/215 (38.14%), Postives = 129/215 (60.00%), Query Frame = 0


Query: 105 KKLFELRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDA 164
           +K  EL LK NEARK N   +  E K+++ P+      S+ +W   +E++KK+      A
Sbjct: 41  RKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKSRLEWELKVEEKKKE----CVA 100

Query: 165 NGLDMTKAYMLD-TQEAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEY 224
            G D  +  +L+ + E AE   +K +K     G+  +    +   Y++ T+ +  DLE+Y
Sbjct: 101 KGEDYERVKLLEISAEDAERFERKRKKRNPDLGFSDYAAAQM-RQYQRLTRQIKPDLEKY 160

Query: 225 NKMK-ESDPEFYREASSLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDI 284
            K++ ES  EFY  ++SL +G      E  +D MV++L+++ +KR+ +SRRR +++D DI
Sbjct: 161 AKLREESGEEFYPTSNSLLHGTHVPCKEG-VDKMVEDLEKQIQKREKYSRRRPYNDDADI 220

Query: 285 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 221 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]

BLAST of Lcy07g010120 vs. ExPASy Swiss-Prot
Match: Q9D198 (Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.9e-24
Identity = 84/215 (39.07%), Postives = 126/215 (58.60%), Query Frame = 0


Query: 103 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 162
           R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 163 NGLDMTKAYMLD-TQEAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEY 222
            G D  K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQL-RQYHRLTKQIKPDMESY 151

Query: 223 NKMKESDPE-FYREASSLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDI 282
            + +E   E F+  ++SL +G     SE+ ID MV +L+++ EKR  +SRRR +++D DI
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKRDKYSRRRPYNDDADI 211

Query: 283 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 212 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242

[Close]

BLAST of Lcy07g010120 vs. ExPASy Swiss-Prot
Match: Q4QRB2 (Pre-mRNA-splicing factor SYF2 OS=Rattus norvegicus OX=10116 GN=Syf2 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.9e-24
Identity = 84/215 (39.07%), Postives = 126/215 (58.60%), Query Frame = 0


Query: 103 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 162
           R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 163 NGLDMTKAYMLD-TQEAAESKYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEY 222
            G D  K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQL-RQYHRLTKQIKPDMESY 151

Query: 223 NKMKESDPE-FYREASSLQYGKSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDI 282
            + +E   E F+  ++SL +G     SE+ ID MV +L+++ EKR  +SRRR +++D DI
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKRDKYSRRRPYNDDADI 211

Query: 283 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 212 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242

[Close]

BLAST of Lcy07g010120 vs. ExPASy TrEMBL
Match: A0A0A0LJ81 (Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.9e-165
Identity = 294/315 (93.33%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 60
           M+DEGRVHPDCRNASNPYHECSEYCFK+IAE+KAR+Q NEPVP SSE VQAGRS GSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGD+DKFSG E VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 181 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKD APYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           +PK+SEDKIDNMVKELK+RDEKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Lcy07g010120 vs. ExPASy TrEMBL
Match: A0A6J1FXE9 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 9.2e-165
Identity = 294/315 (93.33%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 1   MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 60
           M+DEGRVHPDCRNASNPYHEC+EYCFK+IAEVKARNQ NEPVP SSE VQAGRS GSSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 120
           VPPDEYEDL DEKP+EEGHSDGD DKFSGGE VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKD APYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           +PK+SEDKIDNMVKELK+R+EKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Lcy07g010120 vs. ExPASy TrEMBL
Match: A0A6J1JD37 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.1e-164
Identity = 293/315 (93.02%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 1   MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 60
           M+DEGRVHPDCRNASNPYHEC+EYCFK+IAEVKARNQ NEPVP SSE VQAGRS GSSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 120
           VPPDEYEDL DEKP+EEGHSDGD DKFSGGE VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKD APYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGK 240

Query: 241 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           +PK+SEDKIDNMVKELK+R+EKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Lcy07g010120 vs. ExPASy TrEMBL
Match: A0A5A7TRR3 (Pre-mRNA-splicing factor SYF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001060 PE=3 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.1e-164
Identity = 291/315 (92.38%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 60
           M+DEGRVHPDCRNASNPYHECSEYCFK+IA++KAR+Q NEPVP SSE VQAGRS GSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGD+DKFSG E VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180

Query: 181 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKD APYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           +PK+SEDKI+NMVKELK+RDEKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Lcy07g010120 vs. ExPASy TrEMBL
Match: A0A1S3C6T5 (Pre-mRNA-splicing factor SYF2 OS=Cucumis melo OX=3656 GN=LOC103497339 PE=3 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.1e-164
Identity = 291/315 (92.38%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 60
           M+DEGRVHPDCRNASNPYHECSEYCFK+IA++KAR+Q NEPVP SSE VQAGRS GSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGD+DKFSG E VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180

Query: 181 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKD APYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           +PK+SEDKI+NMVKELK+RDEKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Lcy07g010120 vs. NCBI nr
Match: XP_011649295.1 (pre-mRNA-splicing factor syf2 [Cucumis sativus] >KGN61940.1 hypothetical protein Csa_006692 [Cucumis sativus])

HSP 1 Score: 591.7 bits (1524), Expect = 3.8e-165
Identity = 294/315 (93.33%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 60
           M+DEGRVHPDCRNASNPYHECSEYCFK+IAE+KAR+Q NEPVP SSE VQAGRS GSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGD+DKFSG E VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 181 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKD APYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           +PK+SEDKIDNMVKELK+RDEKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Lcy07g010120 vs. NCBI nr
Match: XP_022943827.1 (pre-mRNA-splicing factor syf2-like [Cucurbita moschata] >XP_022943828.1 pre-mRNA-splicing factor syf2-like [Cucurbita moschata])

HSP 1 Score: 589.3 bits (1518), Expect = 1.9e-164
Identity = 294/315 (93.33%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 1   MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 60
           M+DEGRVHPDCRNASNPYHEC+EYCFK+IAEVKARNQ NEPVP SSE VQAGRS GSSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 120
           VPPDEYEDL DEKP+EEGHSDGD DKFSGGE VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKD APYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           +PK+SEDKIDNMVKELK+R+EKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Lcy07g010120 vs. NCBI nr
Match: KAG7010847.1 (Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 589.3 bits (1518), Expect = 1.9e-164
Identity = 294/315 (93.33%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 1   MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 60
           M+DEGRVHPDCRNASNPYHEC+EYCFK+IAEVKARNQ NEPVP SSE VQAGRS GSSNF
Sbjct: 433 MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 492

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 120
           VPPDEYEDL DEKP+EEGHSDGD DKFSGGE VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 493 VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 552

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Sbjct: 553 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 612

Query: 181 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKD APYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 613 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 672

Query: 241 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           +PK+SEDKIDNMVKELK+R+EKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 673 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 732

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 733 LEIKNNLERGTALPD 747

[Close]

BLAST of Lcy07g010120 vs. NCBI nr
Match: XP_008457705.1 (PREDICTED: pre-mRNA-splicing factor syf2 [Cucumis melo] >KAA0045744.1 pre-mRNA-splicing factor syf2 [Cucumis melo var. makuwa] >TYJ99538.1 pre-mRNA-splicing factor syf2 [Cucumis melo var. makuwa])

HSP 1 Score: 588.2 bits (1515), Expect = 4.3e-164
Identity = 291/315 (92.38%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 60
           M+DEGRVHPDCRNASNPYHECSEYCFK+IA++KAR+Q NEPVP SSE VQAGRS GSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGD+DKFSG E VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180

Query: 181 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKD APYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           +PK+SEDKI+NMVKELK+RDEKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Lcy07g010120 vs. NCBI nr
Match: XP_022986094.1 (pre-mRNA-splicing factor syf2-like [Cucurbita maxima] >XP_022986095.1 pre-mRNA-splicing factor syf2-like [Cucurbita maxima])

HSP 1 Score: 588.2 bits (1515), Expect = 4.3e-164
Identity = 293/315 (93.02%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 1   MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKARNQHNEPVPISSEAVQAGRSGGSSNF 60
           M+DEGRVHPDCRNASNPYHEC+EYCFK+IAEVKARNQ NEPVP SSE VQAGRS GSSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARKA 120
           VPPDEYEDL DEKP+EEGHSDGD DKFSGGE VEGDFT+LTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKD APYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGK 240

Query: 241 SPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           +PK+SEDKIDNMVKELK+R+EKRK FSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Lcy07g010120 vs. TAIR 10
Match: AT2G16860.1 (GCIP-interacting family protein )

HSP 1 Score: 410.2 bits (1053), Expect = 1.5e-114
Identity = 219/316 (69.30%), Postives = 247/316 (78.16%), Query Frame = 0


Query: 1   MTDEGRVHPDCRNASNPYHECSEYCFKIIAEVKAR-NQHNEPVPISSEAVQAGRSGGSSN 60
           M  E RVHPDC NASNPYHEC EYCFK IAE KAR  + N  +    E  +         
Sbjct: 1   MVSERRVHPDCINASNPYHECVEYCFKKIAEAKARFEKQNTGLAKVHEQTRE-------- 60

Query: 61  FVPPDEYEDLHDEKPDEEGHSDGDIDKFSGGETVEGDFTQLTGRKKKLFELRLKMNEARK 120
             P D+     D   +EE   D         +  + D TQLTGR+KKLFELRLKMNEARK
Sbjct: 61  --PLDDKRIEEDSSEEEEEEED--------NQEPQVDVTQLTGRQKKLFELRLKMNEARK 120

Query: 121 ANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAES 180
           +NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDMT+AYMLDTQEAAES
Sbjct: 121 SNQTDVGSEKKKMEAPTETKGISKQKWLEGRKKKIGKLLDANGLDMTQAYMLDTQEAAES 180

Query: 181 KYKKWEKDAAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYG 240
           KYKKWEK+  P GWDVFNQKTLYNAYKKRTKN+ VDLEEYN+M+ +DPEFYREASSLQYG
Sbjct: 181 KYKKWEKEPTPAGWDVFNQKTLYNAYKKRTKNIQVDLEEYNRMRAADPEFYREASSLQYG 240

Query: 241 KSPKVSEDKIDNMVKELKERDEKRKLFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY 300
           K+PK S+DKID M KEL +R++KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+Y
Sbjct: 241 KAPKTSQDKIDKMAKELLDREQKRQEFSRRRKFREEKDIDSINDRNEHFNKKIERAFGKY 298

Query: 301 TLEIKNNLERGTALPD 316
           TLEIKNNLERGTALPD
Sbjct: 301 TLEIKNNLERGTALPD 298

[Close]

BLAST of Lcy07g010120 vs. TAIR 10
Match: AT4G38560.1 (Arabidopsis phospholipase-like protein (PEARLI 4) family )

HSP 1 Score: 42.4 bits (98), Expect = 8.1e-04
Identity = 16/26 (61.54%), Postives = 19/26 (73.08%), Query Frame = 0


Query: 5  GRVHPDCRNASNPYHECSEYCFKIIA 31
          G VH DC N+ NPYHEC + CFK I+
Sbjct: 3  GIVHHDCPNSGNPYHECHDQCFKRIS 28

[Close]

BLAST of Lcy07g010120 vs. TAIR 10
Match: AT4G38560.2 (Arabidopsis phospholipase-like protein (PEARLI 4) family )

HSP 1 Score: 42.4 bits (98), Expect = 8.1e-04
Identity = 16/26 (61.54%), Postives = 19/26 (73.08%), Query Frame = 0


Query: 5  GRVHPDCRNASNPYHECSEYCFKIIA 31
          G VH DC N+ NPYHEC + CFK I+
Sbjct: 3  GIVHHDCPNSGNPYHECHDQCFKRIS 28

The following BLAST results are available for this feature:

BLAST of Lcy07g010120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8AVQ6	4.3e-26	39.72	Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1	[more]
Q28G05	1.3e-25	39.25	Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1	[more]
Q6DV01	5.3e-24	38.14	Pre-mRNA-splicing factor syf2 OS=Gekko japonicus OX=146911 GN=syf2 PE=2 SV=1	[more]
Q9D198	6.9e-24	39.07	Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1	[more]
Q4QRB2	6.9e-24	39.07	Pre-mRNA-splicing factor SYF2 OS=Rattus norvegicus OX=10116 GN=Syf2 PE=2 SV=1	[more]

BLAST of Lcy07g010120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ81	1.9e-165	93.33	Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV...	[more]
A0A6J1FXE9	9.2e-165	93.33	Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3...	[more]
A0A6J1JD37	2.1e-164	93.02	Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 S...	[more]
A0A5A7TRR3	2.1e-164	92.38	Pre-mRNA-splicing factor SYF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3C6T5	2.1e-164	92.38	Pre-mRNA-splicing factor SYF2 OS=Cucumis melo OX=3656 GN=LOC103497339 PE=3 SV=1	[more]

BLAST of Lcy07g010120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649295.1	3.8e-165	93.33	pre-mRNA-splicing factor syf2 [Cucumis sativus] >KGN61940.1 hypothetical protein...	[more]
XP_022943827.1	1.9e-164	93.33	pre-mRNA-splicing factor syf2-like [Cucurbita moschata] >XP_022943828.1 pre-mRNA...	[more]
KAG7010847.1	1.9e-164	93.33	Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008457705.1	4.3e-164	92.38	PREDICTED: pre-mRNA-splicing factor syf2 [Cucumis melo] >KAA0045744.1 pre-mRNA-s...	[more]
XP_022986094.1	4.3e-164	93.02	pre-mRNA-splicing factor syf2-like [Cucurbita maxima] >XP_022986095.1 pre-mRNA-s...	[more]

BLAST of Lcy07g010120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16860.1	1.5e-114	69.30	GCIP-interacting family protein	[more]
AT4G38560.1	8.1e-04	61.54	Arabidopsis phospholipase-like protein (PEARLI 4) family	[more]
AT4G38560.2	8.1e-04	61.54	Arabidopsis phospholipase-like protein (PEARLI 4) family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013260	mRNA splicing factor SYF2	PFAM	PF08231	SYF2	coord: 161..308 e-value: 9.0E-35 score: 120.4
IPR013260	mRNA splicing factor SYF2	PANTHER	PTHR13264	GCIP-INTERACTING PROTEIN P29	coord: 1..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..57
None	No IPR available	PANTHER	PTHR13264:SF5	PRE-MRNA-SPLICING FACTOR SYF2	coord: 1..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g010120.1	Lcy07g010120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0071014	post-mRNA release spliceosomal complex
cellular_component	GO:0000974	Prp19 complex