Sequences
The following sequences are available for this feature:
Legend: exon five_prime_UTR CDS polypeptide three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGAGGTGTGGGTTGGATCGCTCGTGATTCTTTCGGGTCTCTA ATGGGAGTCAGCTGCACCCAAATTCAGAGGAAATGGTCAATTAAAGCCCTCGAGTTGCTAGCGATCAAAGAAGGATTAACTTACATGGTGGGTGATCGAAATCTTCCTCGTCGAATCATTGTTGAATCAAATTTGCTGGAGCTAGTAAGGGCTCTAAACCATGAAATTGATGACCTGTCGGAGGCGAACTTGGTGTTGGATGAAATCGAGAAGTTGGCTTCTGATGTTGGAGTGATGGCCTTCGTGAAATGCCCGCGGGCAAGCAACAATATTGCGCACGTTCTTGCGCGATCGGTGACTGGGTTCTGGTCGGAGTTTGTTCCATCGTTCGTAGTTGATGGCAGTGGTTTTGTGTATTTTCCCTCTTCCATGCTGGAAGATGAATCGTTTTGTTGGGAAAATGACTTTTTGTTTTGGCTCTCCCATTTAATGCGGGAAGATTTGGGTGTTAATCAAACTTAA TTTTGTGCAACACTT
TTGAGGTGTGGGTTGGATCGCTCGTGATTCTTTCGGGTCTCTAATGGGAGTCAGCTGCACCCAAATTCAGAGGAAATGGTCAATTAAAGCCCTCGAGTTGCTAGCGATCAAAGAAGGATTAACTTACATGGTGGGTGATCGAAATCTTCCTCGTCGAATCATTGTTGAATCAAATTTGCTGGAGCTAGTAAGGGCTCTAAACCATGAAATTGATGACCTGTCGGAGGCGAACTTGGTGTTGGATGAAATCGAGAAGTTGGCTTCTGATGTTGGAGTGATGGCCTTCGTGAAATGCCCGCGGGCAAGCAACAATATTGCGCACGTTCTTGCGCGATCGGTGACTGGGTTCTGGTCGGAGTTTGTTCCATCGTTCGTAGTTGATGGCAGTGGTTTTGTGTATTTTCCCTCTTCCATGCTGGAAGATGAATCGTTTTGTTGGGAAAATGACTTTTTGTTTTGGCTCTCCCATTTAATGCGGGAAGATTTGGGTGTTAATCAAACTTAATTTTGTGCAACACTT
ATGGGAGTCAGCTGCACCCAAATTCAGAGGAAATGGTCAATTAAAGCCCTCGAGTTGCTAGCGATCAAAGAAGGATTAACTTACATGGTGGGTGATCGAAATCTTCCTCGTCGAATCATTGTTGAATCAAATTTGCTGGAGCTAGTAAGGGCTCTAAACCATGAAATTGATGACCTGTCGGAGGCGAACTTGGTGTTGGATGAAATCGAGAAGTTGGCTTCTGATGTTGGAGTGATGGCCTTCGTGAAATGCCCGCGGGCAAGCAACAATATTGCGCACGTTCTTGCGCGATCGGTGACTGGGTTCTGGTCGGAGTTTGTTCCATCGTTCGTAGTTGATGGCAGTGGTTTTGTGTATTTTCCCTCTTCCATGCTGGAAGATGAATCGTTTTGTTGGGAAAATGACTTTTTGTTTTGGCTCTCCCATTTAATGCGGGAAGATTTGGGTGTTAATCAAACTTAA
MGVSCTQIQRKWSIKALELLAIKEGLTYMVGDRNLPRRIIVESNLLELVRALNHEIDDLSEANLVLDEIEKLASDVGVMAFVKCPRASNNIAHVLARSVTGFWSEFVPSFVVDGSGFVYFPSSMLEDESFCWENDFLFWLSHLMREDLGVNQT
Homology
BLAST of Lcy07g009310 vs. NCBI nr
Match:
XP_021753633.1 (uncharacterized protein LOC110719026 [Chenopodium quinoa])
HSP 1 Score: 55.8 bits (133), Expect = 3.7e-04
Identity = 35/118 (29.66%), Postives = 60/118 (50.85%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
XP_021753633.1 3.7e-04 29.66 uncharacterized protein LOC110719026 [Chenopodium quinoa] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
T T G A G G T G T G G G T T G G A T C G C T C G T G A T T C T T T C G G G T C T C T A A T G G G A G T C A G C T G C A C C C A A A T T C A G A G G A A A T G G T C A A T T A A A G C C C T C G A G T T G C T A G C G A T C A A A G A A G G A T T A A C T T A C A T G G T G G G T G A T C G A A A T C T T C C T C G T C G A A T C A T T G T T G A A T C A A A T T T G C T G G A G C T A G T A A G G G C T C T A A A C C A T G A A A T T G A T G A C C T G T C G G A G G C G A A C T T G G T G T T G G A T G A A A T C G A G A A G T T G G C T T C T G A T G T T G G A G T G A T G G C C T T C G T G A A A T G C C C G C G G G C A A G C A A C A A T A T T G C G C A C G T T C T T G C G C G A T C G G T G A C T G G G T T C T G G T C G G A G T T T G T T C C A T C G T T C G T A G T T G A T G G C A G T G G T T T T G T G T A T T T T C C C T C T T C C A T G C T G G A A G A T G A A T C G T T T T G T T G G G A A A A T G A C T T T T T G T T T T G G C T C T C C C A T T T A A T G C G G G A A G A T T T G G G T G T T A A T C A A A C T T A A T T T T G T G C A A C A C T T 50 100 150 200 250 300 350 400 450 500 Score = Expect = 8.7E-9 / Score = 35.2 Sequence Coil PF13456
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 42..62 IPR002156 Ribonuclease H domain PFAM PF13456 RVT_3 coord: 2..98
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0003676 nucleic acid binding
molecular_function
GO:0004523 RNA-DNA hybrid ribonuclease activity
