Lcy07g008540 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAATATCAACAATAATATAGCTAGCTTCTGCCTTCAGCTGTTGAGACAGAGACATGAAGCTTTCTGTTTCTTTCTTCCTTCTTCTTTCTCTTCTTCTGGTAAGCTTTTCAATCTTCCCCTTCAACTTTTATCTCAATATGTTGAGAACTCTTTAAGATTTGTTTTATAAAATTGTTTTATCTTAATTTTTTTTTTCTTTGTTATTTTTGTTCTTTCCAGAGTAGTAGTTAACAATAATTGAAGTTGTTATTAGATTTTTGTATGGTTGTACAATTATCTTTACCTTTACAAATCATTCAATCACATATTTTTATAGTCTAACTTTCAATAAAAATTAACAAGATATGAAAAAAAAAAAAAAAAGAAAAAGAAACCTTTGGGTTTTGAGTTTGTGTTTTGGTTGAATTTAATTAAGAAGATGAATTTCAACCTTTCTTACCAGATAAGAAACCTCAAAAGTCAATAGTTCTATCTCCATCAAAAACCAAATTTCTTCCTTCTCTAATATAGTCTACCTTTTCTTAAAATTGAAAAAATATATATAACATAAATTCTTACAAAGAAATTTGGCTAAATTATAAAAAAAATACTCCTGAACTGTGGGGTTTGTTTCAAAAATGTCTCTGAACTTTGAAAAGTTTAAAAAATATCCTTGAATTTTGAAAAATGTTTCAAAAATACCATTGCCGTTAATTTTTGGATGGAAACCGTTAGAATTTATGGTGAGAGGAGGAAAAAAGAAGAAGCATTTTTCAACAAGGGTATTTTTTAAATTTTTTTGAAAGTTCAAGGGTATTTTTGAAAATGAAACTTTAACGGTTTTCATCCAAAAACTAACGGCAAGGGTATTTTTGAAATATTTTTCGAAGTTCAAGGGCATTTTTGAAACAAACCCCATAGTTTAGGAGCATTTTTTATAATTTAACCAAAAAAATTTCATTAAGTAGGTTGAGTTTTCGAAAATAGAAATTTTAAAACATTTTCTCATCAGGATAATTTTTCATGATTCTTTTGCCAACTCGAACGTAGCTCAATTAACTAATGCATTACATCCAATTAGAAGTTCGAAACTCTATCTCTAGAATTAAAAAAAAAAATTGTAAAAAAAGGAAAAACCAAATCGTTATCGAACTTGTTAGACAATTACCTATTGAAATGGAGGGTTTTTGTTTTTGTGTTTTGTTTTTGGGGACAGTTTGCAGATGTAAGCCATGGAAGGAAGGATCAAGGGGAATACTGGAAGAAAATAATGAAAGACGAAGAAATTCCAGAGATGCTGAAAGAGCTGTTATTTGACGATTCATTGGTGTCCAGTGGGAGCCAAAACGAGCGTTTTATGAACAAGTTCGATCCTCATCCAAATGCTATAATATATCACTCTCACAAGCATCATCCTGATCTCAAAATCAAGCCCTCTGCTCAAAATTCAGCCCCATGATCATTTCAACTTTCAAGATGATGCCCACTACAAATTTACACTAATATATATATATGTGTGTGTGTTTCTTTTTATCACATATATATAATTATTAAGAACTTATTCCAAGAAGGCTTCATGTTTGTGTAAATTATACAACTAGTGTGTGCTCTCTCTCTCTTTCTCTCTCTTTGTTTTGTTTTGTTTTGGTTATTGGGGTTTGGGATTTTCATGATTTGTTGCTTGAATTGATATGGGTTTCTCTCTCTCTTTCTCTTTGTGTGTGTTTCTTATATGATATATATATATATGTATTATGTTATTTTTAGCTGGTTTTGTGCGTTTAAATTATTGTAATCTATTTGGATTTTTTCCCTTCAAGCTTATGAAAATTTGTGTTGTGGT AAGAATATCAACAATAATATAGCTAGCTTCTGCCTTCAGCTGTTGAGACAGAGACATGAAGCTTTCTGTTTCTTTCTTCCTTCTTCTTTCTCTTCTTCTGTTTGCAGATGTAAGCCATGGAAGGAAGGATCAAGGGGAATACTGGAAGAAAATAATGAAAGACGAAGAAATTCCAGAGATGCTGAAAGAGCTGTTATTTGACGATTCATTGGTGTCCAGTGGGAGCCAAAACGAGCGTTTTATGAACAAGTTCGATCCTCATCCAAATGCTATAATATATCACTCTCACAAGCATCATCCTGATCTCAAAATCAAGCCCTCTGCTCAAAATTCAGCCCCATGATCATTTCAACTTTCAAGATGATGCCCACTACAAATTTACACTAATATATATATATGTGTGTGTGTTTCTTTTTATCACATATATATAATTATTAAGAACTTATTCCAAGAAGGCTTCATGTTTGTGTAAATTATACAACTAGTGTGTGCTCTCTCTCTCTTTCTCTCTCTTTGTTTTGTTTTGTTTTGGTTATTGGGGTTTGGGATTTTCATGATTTGTTGCTTGAATTGATATGGGTTTCTCTCTCTCTTTCTCTTTGTGTGTGTTTCTTATATGATATATATATATATGTATTATGTTATTTTTAGCTGGTTTTGTGCGTTTAAATTATTGTAATCTATTTGGATTTTTTCCCTTCAAGCTTATGAAAATTTGTGTTGTGGT ATGAAGCTTTCTGTTTCTTTCTTCCTTCTTCTTTCTCTTCTTCTGTTTGCAGATGTAAGCCATGGAAGGAAGGATCAAGGGGAATACTGGAAGAAAATAATGAAAGACGAAGAAATTCCAGAGATGCTGAAAGAGCTGTTATTTGACGATTCATTGGTGTCCAGTGGGAGCCAAAACGAGCGTTTTATGAACAAGTTCGATCCTCATCCAAATGCTATAATATATCACTCTCACAAGCATCATCCTGATCTCAAAATCAAGCCCTCTGCTCAAAATTCAGCCCCATGA MKLSVSFFLLLSLLLFADVSHGRKDQGEYWKKIMKDEEIPEMLKELLFDDSLVSSGSQNERFMNKFDPHPNAIIYHSHKHHPDLKIKPSAQNSAP Homology
BLAST of Lcy07g008540 vs. ExPASy Swiss-Prot
Match: P17771 (Organ-specific protein P4 OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 6.7e-07 Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0
BLAST of Lcy07g008540 vs. ExPASy Swiss-Prot
Match: P17772 (Organ-specific protein S2 OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.6e-05 Identity = 32/85 (37.65%), Postives = 48/85 (56.47%), Query Frame = 0
BLAST of Lcy07g008540 vs. ExPASy TrEMBL
Match: A0A6J1D5L4 (organ-specific protein P4 OS=Momordica charantia OX=3673 GN=LOC111017249 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 3.8e-29 Identity = 72/101 (71.29%), Postives = 82/101 (81.19%), Query Frame = 0
BLAST of Lcy07g008540 vs. ExPASy TrEMBL
Match: A0A6J1JGL9 (organ-specific protein S2-like OS=Cucurbita maxima OX=3661 GN=LOC111484322 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 7.1e-28 Identity = 70/109 (64.22%), Postives = 83/109 (76.15%), Query Frame = 0
BLAST of Lcy07g008540 vs. ExPASy TrEMBL
Match: A0A6J1FYV4 (organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111449094 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.2e-27 Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of Lcy07g008540 vs. ExPASy TrEMBL
Match: A0A6J1G7K5 (organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111451468 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.3e-25 Identity = 67/94 (71.28%), Postives = 75/94 (79.79%), Query Frame = 0
BLAST of Lcy07g008540 vs. ExPASy TrEMBL
Match: A0A6J1L3N5 (organ-specific protein P4-like OS=Cucurbita maxima OX=3661 GN=LOC111499606 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 4.3e-25 Identity = 68/94 (72.34%), Postives = 76/94 (80.85%), Query Frame = 0
BLAST of Lcy07g008540 vs. NCBI nr
Match: XP_022148637.1 (organ-specific protein P4 [Momordica charantia]) HSP 1 Score: 137.1 bits (344), Expect = 7.8e-29 Identity = 72/101 (71.29%), Postives = 82/101 (81.19%), Query Frame = 0
BLAST of Lcy07g008540 vs. NCBI nr
Match: KAG6571127.1 (hypothetical protein SDJN03_30042, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010938.1 hypothetical protein SDJN02_27736, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 132.9 bits (333), Expect = 1.5e-27 Identity = 70/107 (65.42%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of Lcy07g008540 vs. NCBI nr
Match: XP_022986644.1 (organ-specific protein S2-like [Cucurbita maxima]) HSP 1 Score: 132.9 bits (333), Expect = 1.5e-27 Identity = 70/109 (64.22%), Postives = 83/109 (76.15%), Query Frame = 0
BLAST of Lcy07g008540 vs. NCBI nr
Match: XP_022944721.1 (organ-specific protein P4-like [Cucurbita moschata]) HSP 1 Score: 132.1 bits (331), Expect = 2.5e-27 Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of Lcy07g008540 vs. NCBI nr
Match: XP_023513271.1 (organ-specific protein S2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 130.2 bits (326), Expect = 9.6e-27 Identity = 69/107 (64.49%), Postives = 82/107 (76.64%), Query Frame = 0
BLAST of Lcy07g008540 vs. TAIR 10
Match: AT1G49310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; Has 11 Blast hits to 11 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 9.6e-09 Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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