Lcy07g008540 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g008540
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionorgan-specific protein P4
LocationChr07: 37009378 .. 37011201 (+)
RNA-Seq ExpressionLcy07g008540
SyntenyLcy07g008540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAATATCAACAATAATATAGCTAGCTTCTGCCTTCAGCTGTTGAGACAGAGACATGAAGCTTTCTGTTTCTTTCTTCCTTCTTCTTTCTCTTCTTCTGGTAAGCTTTTCAATCTTCCCCTTCAACTTTTATCTCAATATGTTGAGAACTCTTTAAGATTTGTTTTATAAAATTGTTTTATCTTAATTTTTTTTTTCTTTGTTATTTTTGTTCTTTCCAGAGTAGTAGTTAACAATAATTGAAGTTGTTATTAGATTTTTGTATGGTTGTACAATTATCTTTACCTTTACAAATCATTCAATCACATATTTTTATAGTCTAACTTTCAATAAAAATTAACAAGATATGAAAAAAAAAAAAAAAAGAAAAAGAAACCTTTGGGTTTTGAGTTTGTGTTTTGGTTGAATTTAATTAAGAAGATGAATTTCAACCTTTCTTACCAGATAAGAAACCTCAAAAGTCAATAGTTCTATCTCCATCAAAAACCAAATTTCTTCCTTCTCTAATATAGTCTACCTTTTCTTAAAATTGAAAAAATATATATAACATAAATTCTTACAAAGAAATTTGGCTAAATTATAAAAAAAATACTCCTGAACTGTGGGGTTTGTTTCAAAAATGTCTCTGAACTTTGAAAAGTTTAAAAAATATCCTTGAATTTTGAAAAATGTTTCAAAAATACCATTGCCGTTAATTTTTGGATGGAAACCGTTAGAATTTATGGTGAGAGGAGGAAAAAAGAAGAAGCATTTTTCAACAAGGGTATTTTTTAAATTTTTTTGAAAGTTCAAGGGTATTTTTGAAAATGAAACTTTAACGGTTTTCATCCAAAAACTAACGGCAAGGGTATTTTTGAAATATTTTTCGAAGTTCAAGGGCATTTTTGAAACAAACCCCATAGTTTAGGAGCATTTTTTATAATTTAACCAAAAAAATTTCATTAAGTAGGTTGAGTTTTCGAAAATAGAAATTTTAAAACATTTTCTCATCAGGATAATTTTTCATGATTCTTTTGCCAACTCGAACGTAGCTCAATTAACTAATGCATTACATCCAATTAGAAGTTCGAAACTCTATCTCTAGAATTAAAAAAAAAAATTGTAAAAAAAGGAAAAACCAAATCGTTATCGAACTTGTTAGACAATTACCTATTGAAATGGAGGGTTTTTGTTTTTGTGTTTTGTTTTTGGGGACAGTTTGCAGATGTAAGCCATGGAAGGAAGGATCAAGGGGAATACTGGAAGAAAATAATGAAAGACGAAGAAATTCCAGAGATGCTGAAAGAGCTGTTATTTGACGATTCATTGGTGTCCAGTGGGAGCCAAAACGAGCGTTTTATGAACAAGTTCGATCCTCATCCAAATGCTATAATATATCACTCTCACAAGCATCATCCTGATCTCAAAATCAAGCCCTCTGCTCAAAATTCAGCCCCATGATCATTTCAACTTTCAAGATGATGCCCACTACAAATTTACACTAATATATATATATGTGTGTGTGTTTCTTTTTATCACATATATATAATTATTAAGAACTTATTCCAAGAAGGCTTCATGTTTGTGTAAATTATACAACTAGTGTGTGCTCTCTCTCTCTTTCTCTCTCTTTGTTTTGTTTTGTTTTGGTTATTGGGGTTTGGGATTTTCATGATTTGTTGCTTGAATTGATATGGGTTTCTCTCTCTCTTTCTCTTTGTGTGTGTTTCTTATATGATATATATATATATGTATTATGTTATTTTTAGCTGGTTTTGTGCGTTTAAATTATTGTAATCTATTTGGATTTTTTCCCTTCAAGCTTATGAAAATTTGTGTTGTGGT

mRNA sequence

AAGAATATCAACAATAATATAGCTAGCTTCTGCCTTCAGCTGTTGAGACAGAGACATGAAGCTTTCTGTTTCTTTCTTCCTTCTTCTTTCTCTTCTTCTGTTTGCAGATGTAAGCCATGGAAGGAAGGATCAAGGGGAATACTGGAAGAAAATAATGAAAGACGAAGAAATTCCAGAGATGCTGAAAGAGCTGTTATTTGACGATTCATTGGTGTCCAGTGGGAGCCAAAACGAGCGTTTTATGAACAAGTTCGATCCTCATCCAAATGCTATAATATATCACTCTCACAAGCATCATCCTGATCTCAAAATCAAGCCCTCTGCTCAAAATTCAGCCCCATGATCATTTCAACTTTCAAGATGATGCCCACTACAAATTTACACTAATATATATATATGTGTGTGTGTTTCTTTTTATCACATATATATAATTATTAAGAACTTATTCCAAGAAGGCTTCATGTTTGTGTAAATTATACAACTAGTGTGTGCTCTCTCTCTCTTTCTCTCTCTTTGTTTTGTTTTGTTTTGGTTATTGGGGTTTGGGATTTTCATGATTTGTTGCTTGAATTGATATGGGTTTCTCTCTCTCTTTCTCTTTGTGTGTGTTTCTTATATGATATATATATATATGTATTATGTTATTTTTAGCTGGTTTTGTGCGTTTAAATTATTGTAATCTATTTGGATTTTTTCCCTTCAAGCTTATGAAAATTTGTGTTGTGGT

Coding sequence (CDS)

ATGAAGCTTTCTGTTTCTTTCTTCCTTCTTCTTTCTCTTCTTCTGTTTGCAGATGTAAGCCATGGAAGGAAGGATCAAGGGGAATACTGGAAGAAAATAATGAAAGACGAAGAAATTCCAGAGATGCTGAAAGAGCTGTTATTTGACGATTCATTGGTGTCCAGTGGGAGCCAAAACGAGCGTTTTATGAACAAGTTCGATCCTCATCCAAATGCTATAATATATCACTCTCACAAGCATCATCCTGATCTCAAAATCAAGCCCTCTGCTCAAAATTCAGCCCCATGA

Protein sequence

MKLSVSFFLLLSLLLFADVSHGRKDQGEYWKKIMKDEEIPEMLKELLFDDSLVSSGSQNERFMNKFDPHPNAIIYHSHKHHPDLKIKPSAQNSAP
Homology
BLAST of Lcy07g008540 vs. ExPASy Swiss-Prot
Match: P17771 (Organ-specific protein P4 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.7e-07
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0

Query: 6  SFFLLLSLLLFADVSH--GRKDQGEYWKKIMKDEEIPEMLKELLFDDSLVSS---GSQNE 65
          S F LL L LF  V++   RKD GEYWK +MKD+++PE ++ LL   ++ +S     +N+
Sbjct: 6  SAFALLPLFLFLIVANVESRKDVGEYWKLVMKDQDMPEEIQGLLDASNIKNSKTHAKENK 65

Query: 66 RFMNKFDPHPNAIIYHSHKHH 82
            + +F+P PNA  Y  ++ H
Sbjct: 66 GAIGEFEPCPNASAYGDNEIH 86

BLAST of Lcy07g008540 vs. ExPASy Swiss-Prot
Match: P17772 (Organ-specific protein S2 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.6e-05
Identity = 32/85 (37.65%), Postives = 48/85 (56.47%), Query Frame = 0

Query: 1  MKLSVSFFLL-LSLLLFADVSHGRKDQGEYWKKIMKDEEIPEMLKELLFDDSLVSS---G 60
          M L  +F LL L LLL       RKD GEYWK +MKD+++PE ++ LL   ++ +S    
Sbjct: 1  MSLRSAFALLPLFLLLIVANVESRKDVGEYWKLVMKDQDMPEEIQGLLDASNIKNSKTHA 60

Query: 61 SQNERFMNKFDPHPNAIIYHSHKHH 82
           +N   + +F+P P A  Y  ++ H
Sbjct: 61 KENMGAIGEFEPRPYASAYGDNEIH 85

BLAST of Lcy07g008540 vs. ExPASy TrEMBL
Match: A0A6J1D5L4 (organ-specific protein P4 OS=Momordica charantia OX=3673 GN=LOC111017249 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.8e-29
Identity = 72/101 (71.29%), Postives = 82/101 (81.19%), Query Frame = 0

Query: 1  MKLSVSFFLLLSLLLFADVSHGRKDQGEYWKKIMKDEEIPEMLKELLFDDSLVSSGSQNE 60
          MKLSV+FFLLLSLLLFA+  +GRKDQGEYWKKIMK+EEIPE+LKELL+DDS+   G QNE
Sbjct: 1  MKLSVAFFLLLSLLLFAEGGYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSV---GGQNE 60

Query: 61 RFMNKFDPHPNAIIYHSHKH-------HPDLKIKPSAQNSA 95
          RFM+ FDPHPNAIIYHSH H       H D KIK +A +SA
Sbjct: 61 RFMSNFDPHPNAIIYHSHSHGAAAGHEHSDEKIKAAAGDSA 98

BLAST of Lcy07g008540 vs. ExPASy TrEMBL
Match: A0A6J1JGL9 (organ-specific protein S2-like OS=Cucurbita maxima OX=3661 GN=LOC111484322 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.1e-28
Identity = 70/109 (64.22%), Postives = 83/109 (76.15%), Query Frame = 0

Query: 1   MKLSVSFFLLLSLLLFADVSHG-RKDQGEYWKKIMKDEEIPEMLKELLFDDSLVSSGSQN 60
           MKLS++FFLLLSL+LF DVSHG RKDQG+YWKK+MK+EEIPEMLKELLFDDS+V   +Q 
Sbjct: 1   MKLSLAFFLLLSLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLFDDSMVE--NQK 60

Query: 61  ERFMNKFDPHPNAIIYHSHKH-------------HPDLKIKPSAQNSAP 96
           +RFMN FDPHPNAIIYH+H H             + D+K  P+  NSAP
Sbjct: 61  QRFMNNFDPHPNAIIYHAHAHAHAHGHGAATPRRNIDIKFNPTVANSAP 107

BLAST of Lcy07g008540 vs. ExPASy TrEMBL
Match: A0A6J1FYV4 (organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111449094 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-27
Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = 0

Query: 1   MKLSVSFFLLLSLLLFADVSHG-RKDQGEYWKKIMKDEEIPEMLKELLFDDSLVSSGSQN 60
           MKLS++FFLL+SL+LF DVSHG RKDQG+YWKK+MK+EEIPEMLKELLFDDS+V   +Q 
Sbjct: 1   MKLSLAFFLLISLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLFDDSMVE--NQK 60

Query: 61  ERFMNKFDPHPNAIIYHSHKH-----------HPDLKIKPSAQNSAP 96
           +RFMN FDPHPNAIIYH+H H           + D+K  P+  NSAP
Sbjct: 61  QRFMNNFDPHPNAIIYHAHAHAHGHGAATPTRNIDIKSNPTVANSAP 105

BLAST of Lcy07g008540 vs. ExPASy TrEMBL
Match: A0A6J1G7K5 (organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111451468 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.3e-25
Identity = 67/94 (71.28%), Postives = 75/94 (79.79%), Query Frame = 0

Query: 1  MKLSVSFFLLLSLLLFADVSHGRKDQGEYWKKIMKDEEIPEMLKELLF-DDSLVSSGSQN 60
          MKLS +FFLL  L+L A+VSH RK++GEYWKK+MKDE IPEMLKELLF DDSLVSS +Q+
Sbjct: 1  MKLSAAFFLLF-LILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQS 60

Query: 61 ERFMNKFDPHPNAIIYHSH---KHHPDLKIKPSA 91
          E FMN FD HPNAIIYHSH     HP  K KPSA
Sbjct: 61 EHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSA 93

BLAST of Lcy07g008540 vs. ExPASy TrEMBL
Match: A0A6J1L3N5 (organ-specific protein P4-like OS=Cucurbita maxima OX=3661 GN=LOC111499606 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.3e-25
Identity = 68/94 (72.34%), Postives = 76/94 (80.85%), Query Frame = 0

Query: 1  MKLSVSFFLLLSLLLFADVSHGRKDQGEYWKKIMKDEEIPEMLKELLF-DDSLVSSGSQN 60
          MKLS +FF LLSLLL A+VSH RK++GEYWKK+MKDE IPEMLKELLF DDSLVSS +Q+
Sbjct: 1  MKLSAAFF-LLSLLLLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQS 60

Query: 61 ERFMNKFDPHPNAIIYHSH---KHHPDLKIKPSA 91
          ERFMN FD HPNAIIYHSH     HP  K K +A
Sbjct: 61 ERFMNNFDTHPNAIIYHSHGATHDHPGHKTKLTA 93

BLAST of Lcy07g008540 vs. NCBI nr
Match: XP_022148637.1 (organ-specific protein P4 [Momordica charantia])

HSP 1 Score: 137.1 bits (344), Expect = 7.8e-29
Identity = 72/101 (71.29%), Postives = 82/101 (81.19%), Query Frame = 0

Query: 1  MKLSVSFFLLLSLLLFADVSHGRKDQGEYWKKIMKDEEIPEMLKELLFDDSLVSSGSQNE 60
          MKLSV+FFLLLSLLLFA+  +GRKDQGEYWKKIMK+EEIPE+LKELL+DDS+   G QNE
Sbjct: 1  MKLSVAFFLLLSLLLFAEGGYGRKDQGEYWKKIMKEEEIPEVLKELLYDDSV---GGQNE 60

Query: 61 RFMNKFDPHPNAIIYHSHKH-------HPDLKIKPSAQNSA 95
          RFM+ FDPHPNAIIYHSH H       H D KIK +A +SA
Sbjct: 61 RFMSNFDPHPNAIIYHSHSHGAAAGHEHSDEKIKAAAGDSA 98

BLAST of Lcy07g008540 vs. NCBI nr
Match: KAG6571127.1 (hypothetical protein SDJN03_30042, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010938.1 hypothetical protein SDJN02_27736, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132.9 bits (333), Expect = 1.5e-27
Identity = 70/107 (65.42%), Postives = 83/107 (77.57%), Query Frame = 0

Query: 1   MKLSVSFFLLLSLLLFADVSHG-RKDQGEYWKKIMKDEEIPEMLKELLFDDSLVSSGSQN 60
           MKLS++FFLLLSL+LF DVSHG RKDQG+YWKK+MK+EEIPEMLKELLFDDS+V   +Q 
Sbjct: 1   MKLSLAFFLLLSLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLFDDSMVE--NQK 60

Query: 61  ERFMNKFDPHPNAIIYHSHKH-----------HPDLKIKPSAQNSAP 96
           +RFMN FDPHPNAIIYH+H H           + D+K  P+  NSAP
Sbjct: 61  QRFMNNFDPHPNAIIYHAHAHAHGHGAATPTRNIDIKSNPTVANSAP 105

BLAST of Lcy07g008540 vs. NCBI nr
Match: XP_022986644.1 (organ-specific protein S2-like [Cucurbita maxima])

HSP 1 Score: 132.9 bits (333), Expect = 1.5e-27
Identity = 70/109 (64.22%), Postives = 83/109 (76.15%), Query Frame = 0

Query: 1   MKLSVSFFLLLSLLLFADVSHG-RKDQGEYWKKIMKDEEIPEMLKELLFDDSLVSSGSQN 60
           MKLS++FFLLLSL+LF DVSHG RKDQG+YWKK+MK+EEIPEMLKELLFDDS+V   +Q 
Sbjct: 1   MKLSLAFFLLLSLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLFDDSMVE--NQK 60

Query: 61  ERFMNKFDPHPNAIIYHSHKH-------------HPDLKIKPSAQNSAP 96
           +RFMN FDPHPNAIIYH+H H             + D+K  P+  NSAP
Sbjct: 61  QRFMNNFDPHPNAIIYHAHAHAHAHGHGAATPRRNIDIKFNPTVANSAP 107

BLAST of Lcy07g008540 vs. NCBI nr
Match: XP_022944721.1 (organ-specific protein P4-like [Cucurbita moschata])

HSP 1 Score: 132.1 bits (331), Expect = 2.5e-27
Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = 0

Query: 1   MKLSVSFFLLLSLLLFADVSHG-RKDQGEYWKKIMKDEEIPEMLKELLFDDSLVSSGSQN 60
           MKLS++FFLL+SL+LF DVSHG RKDQG+YWKK+MK+EEIPEMLKELLFDDS+V   +Q 
Sbjct: 1   MKLSLAFFLLISLVLFVDVSHGSRKDQGKYWKKMMKNEEIPEMLKELLFDDSMVE--NQK 60

Query: 61  ERFMNKFDPHPNAIIYHSHKH-----------HPDLKIKPSAQNSAP 96
           +RFMN FDPHPNAIIYH+H H           + D+K  P+  NSAP
Sbjct: 61  QRFMNNFDPHPNAIIYHAHAHAHGHGAATPTRNIDIKSNPTVANSAP 105

BLAST of Lcy07g008540 vs. NCBI nr
Match: XP_023513271.1 (organ-specific protein S2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 130.2 bits (326), Expect = 9.6e-27
Identity = 69/107 (64.49%), Postives = 82/107 (76.64%), Query Frame = 0

Query: 1   MKLSVSFFLLLSLLLFADVSHG-RKDQGEYWKKIMKDEEIPEMLKELLFDDSLVSSGSQN 60
           MKLS++FFLLLSL+LF DVS G RKDQG+YWKK+MK+EEIPEMLKELLFDDS+V   +Q 
Sbjct: 1   MKLSLAFFLLLSLVLFVDVSDGSRKDQGKYWKKMMKNEEIPEMLKELLFDDSMVE--NQK 60

Query: 61  ERFMNKFDPHPNAIIYHSHKH-----------HPDLKIKPSAQNSAP 96
           +RFMN FDPHPNAIIYH+H H           + D+K  P+  NSAP
Sbjct: 61  QRFMNNFDPHPNAIIYHAHAHAHGHGAATPRRNIDIKFNPTGANSAP 105

BLAST of Lcy07g008540 vs. TAIR 10
Match: AT1G49310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; Has 11 Blast hits to 11 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 9.6e-09
Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 0

Query: 5  VSFFLLLSLLLFADVSHGRKD--QGEYWKKIMKDEEIPEMLKELLFDDSLVSSGSQNERF 64
          V F +LLS LLF ++S GR      EYWKK+MK+E +PE +KELL +    +     ERF
Sbjct: 9  VVFIVLLSFLLFVNLSEGRTGGVAEEYWKKMMKNEPLPEPIKELLNNPFRTA----QERF 68

Query: 65 MNKFDPHPNAIIYHS 78
          +  FD     IIYH+
Sbjct: 69 IQNFDTKSVVIIYHN 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P177716.7e-0739.51Organ-specific protein P4 OS=Pisum sativum OX=3888 PE=2 SV=1[more]
P177721.6e-0537.65Organ-specific protein S2 OS=Pisum sativum OX=3888 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1D5L43.8e-2971.29organ-specific protein P4 OS=Momordica charantia OX=3673 GN=LOC111017249 PE=4 SV... [more]
A0A6J1JGL97.1e-2864.22organ-specific protein S2-like OS=Cucurbita maxima OX=3661 GN=LOC111484322 PE=4 ... [more]
A0A6J1FYV41.2e-2764.49organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111449094 PE=... [more]
A0A6J1G7K53.3e-2571.28organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111451468 PE=... [more]
A0A6J1L3N54.3e-2572.34organ-specific protein P4-like OS=Cucurbita maxima OX=3661 GN=LOC111499606 PE=4 ... [more]
Match NameE-valueIdentityDescription
XP_022148637.17.8e-2971.29organ-specific protein P4 [Momordica charantia][more]
KAG6571127.11.5e-2765.42hypothetical protein SDJN03_30042, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022986644.11.5e-2764.22organ-specific protein S2-like [Cucurbita maxima][more]
XP_022944721.12.5e-2764.49organ-specific protein P4-like [Cucurbita moschata][more]
XP_023513271.19.6e-2764.49organ-specific protein S2-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT1G49310.19.6e-0945.33unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024489Organ specific proteinPFAMPF10950Organ_specificcoord: 24..77
e-value: 1.2E-7
score: 32.5
NoneNo IPR availablePANTHERPTHR33731PROTEIN, PUTATIVE-RELATEDcoord: 1..86
NoneNo IPR availablePANTHERPTHR33731:SF2PROTEIN, PUTATIVE-RELATEDcoord: 1..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g008540.1Lcy07g008540.1mRNA