Lcy07g006070 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g006070
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr07: 31283603 .. 31285893 (-)
RNA-Seq ExpressionLcy07g006070
SyntenyLcy07g006070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCCTTTTGCTTCGGCTCCTTGCTAATTCTCTCAGGATCTTCAGGCTGGTACTTATTCTCAACGGTGAGTGGCAAAATGCGCACTTGGAGGTCAGGTACACTGATGTCGATTACATTGTCTTCACGGACGCTGCTTCTCTAATGGTGTAACGCCCGTAATTTAAGAGAAATTCAAATTTGTTAGTTGGGTGTTATTTTGAGTTAAGAGGGAATTTTGCAAATTTGAAAATTTGTGAAATATTTAAAATTTGGGCTCAATGGCATTTTTGTAAATAGGCCGAAATTAGAGCCAAGCCCAAGCCCAATTGGTTTTTATTTAGCCTTTCACGCAGCCCTAGGTCAGCATTTTTGCTTCATCCCATTCTTCTTCTTCCTTCTTTACGCCAGCAGCCCCTTTTTCGATTTCCCTTCTTCCGGCGACAGCACACAAATCGACAGTAGGCACTGGTTGCAGAGAAATCCGACGACGGCACAACTCCTCCGGCGAGTCTGCGATGGGTGCAGTGAACCTCCTGCGACGGTGCGTCCTTCAGCGTGCAGCTTCAGCAGGTTCGACGTGTTCTGGCGGTGACAATCTCGGTCCTCACGGCGGCAGTAGCATCTTGTAGGTGGTCTAGCAGCGGCGACGCTTGTCTCTTCGGCGCGATGTGCAGCAGCTGGAGCGTTCGCGGCGTTTTCGAACAGCAAGACTTCAGGCACGCGTTCCTCCAACCACCTCGGTTCAGCAACTCGCGATTTGGCGTGGTTGCAGCAAGTGGGTTTATTTTTCGGTGATTTAGTAACGGGCAAAAGCTGTTGTAGGTGTGTTCCAGCGGTGCAACAACTTTAAGCTTCGAAAATTGCCGTTTTTGAGCGATTTCGTCAGTGGTCTTTAAATAAAAATATTGAAGTTGGAGCAAATTAGAAGTCCGTCCAGCAAGCTTGAAGCCGTTTTGGAATCAAATCCATTTAATTGAAGTCATCGTTGACTTGTTGCTAGAGTTAAATTGGAGTTTCAAATCAAGGATTCATAAGCCTAGGTAAGTGAACTTACTGTTGAATCTTTTTAATTGGGTGCGCGTGTTGGATTTTTTCTAAAATTCTCGTGCTTATTCGTGAAATTCATATTTATTATTAGAAGCATGAGAATTGTGCATGAAAAATTTATTATTTTTAATTGAGTATGCGTTTATGTAATTTGTTGAAAGCATGAGATTTATTATTTTTGCTTGCATTTGTTGATATTTAAAATAGTTGAGTTTGTGGTCTCTCAAAATCCCATTAAAGGGATTGAGTTTAAATTCCATTAAAGGAATGAGTTTCAATTAGTGTACATGAAATTGATGTACATTCGAAGATGCCTACACAGGGCTTAGGGACATGAAATTGATGTACCTAAGTCGAGGTTTGTGATATTGACGACCTCGAGGTTTCGTGAAATTGACGGGCTCTGTAGGAGACACATGAAATTGATGTGTCTAGAATATGCATGAAATTGATGTATATTCTCTCTCGGTAGAAAAACACATGAAATTGATGTGTCTAGGATATGCATGAAATTGATGTATATCCTAAGTTTAAAATAAAGTTAGAGCCACCAAAATTATATTTATTGTTGATTTTTTTAAAAATGTTTTTAAAGCGTGACCCAACCTCAATAGTAGGGTCACTTACTGAGTATTTAAAATACTCATTCTTTTCAAAAATAATTTTTTTTAGGTAAAGGCAAGGGCAGATGGAAGGCGATTGATGAGAATCCGATAGACAGCCATGAGAGGACCTGAAGTTCATATCTTATTTTTCTTCCGCTTTAAGAACTCTGTTTTACTTTATTTGAATTATAAATTTGTTTTGAAAAAAGTTTCTAGAGGTCATGTACGTTTATATTTTATAAATTATAAGCCTATTTAAAACTTTTAAAATTAGGGATCCCGAATAAAAGTTTTGTTTTAAAGTTTTTACTTAAACTAGTGTTTATGTTTCAAATTTTTTTTATTTAAAAAGACCTCCAAAGCATGCATTGTTGTAACGGTCCCTTAAAGGCTTATTAAGAAGTCGGGTCGTTACAAATGGCATCCGAAAAGTCTCCCTATCTGAGATCCACTTACAGATACTCACCATTGCTCGCGTATTTGCTCATTTCGAACTCTATCTTCCATCACTGTTGGGGCAATTTTATGTTCTCAGCGTCAGGTACCTTCACCTTTTCATTTGATAATCGATTCGTTAAATCATAATTTTCCGTTGGTTTCTATGTTAATTGTCTTGGTTCTGTCTAGATTTGCTCGTCTGGTTCTTTATACGTAA

mRNA sequence

ATGGCATCCTTTTGCTTCGGCTCCTTGCTAATTCTCTCAGGATCTTCAGGCTGGTACTTATTCTCAACGGTGAGTGGCAAAATGCGCACTTGGAGGTCAGGTGGTCTAGCAGCGGCGACGCTTGTCTCTTCGGCGCGATGTGCAGCAGCTGGAGCGTTCGCGGCGTTTTCGAACAGCAAGACTTCAGGCACGCGTTCCTCCAACCACCTCGGTTCAGCAACTCGCGATTTGGCGTGGTTGCAGCAAATACTCACCATTGCTCGCGTATTTGCTCATTTCGAACTCTATCTTCCATCACTGTTGGGGCAATTTTATGTTCTCAGCGTCAGATTTGCTCGTCTGGTTCTTTATACGTAA

Coding sequence (CDS)

ATGGCATCCTTTTGCTTCGGCTCCTTGCTAATTCTCTCAGGATCTTCAGGCTGGTACTTATTCTCAACGGTGAGTGGCAAAATGCGCACTTGGAGGTCAGGTGGTCTAGCAGCGGCGACGCTTGTCTCTTCGGCGCGATGTGCAGCAGCTGGAGCGTTCGCGGCGTTTTCGAACAGCAAGACTTCAGGCACGCGTTCCTCCAACCACCTCGGTTCAGCAACTCGCGATTTGGCGTGGTTGCAGCAAATACTCACCATTGCTCGCGTATTTGCTCATTTCGAACTCTATCTTCCATCACTGTTGGGGCAATTTTATGTTCTCAGCGTCAGATTTGCTCGTCTGGTTCTTTATACGTAA

Protein sequence

MASFCFGSLLILSGSSGWYLFSTVSGKMRTWRSGGLAAATLVSSARCAAAGAFAAFSNSKTSGTRSSNHLGSATRDLAWLQQILTIARVFAHFELYLPSLLGQFYVLSVRFARLVLYT
Homology
[Close]
BLAST of Lcy07g006070 vs. NCBI nr
Match: KAG6572134.1 (GPI mannosyltransferase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 54.3 bits (129), Expect = 8.3e-04
Identity = 26/37 (70.27%), Postives = 32/37 (86.49%), Query Frame = 0 

Query: 82  QILTIARVFAHFELYLPSLLGQFYVLSVRFARLVLYT 119
           +ILT+AR+FAH ELYLPSLLG+  + SVRFAR +LYT
Sbjct: 32  EILTVARIFAHTELYLPSLLGKISIFSVRFARRLLYT 68

The following BLAST results are available for this feature:
BLAST of Lcy07g006070 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy07g006070 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy07g006070 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6572134.18.3e-0470.27GPI mannosyltransferase 1, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Lcy07g006070 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g006070.1Lcy07g006070.1mRNA