Lcy07g005510 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g005510
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr07: 28794771 .. 28797156 (-)
RNA-Seq ExpressionLcy07g005510
SyntenyLcy07g005510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACTCCTCAAGAAGAATTCGCCCCAAAGCGTGGAATCAGACAGGGAGATCCTCTATCCCCCTATTTATTCCTCATATGTGCAGAAGGTTTCTCGAGTTTACTAAACAGGGAAGTTGAATCTAGTAATCTTCAAGGTTTTCGAATTAATAATCACTGTCCTACAATCTCTCATTTATTTTTCGTTGATGATAGTCTCATTTTTTGCAGGGAAAACTCAAAGGAATGTCACGTAATCAAAGAGACTTTTAAAAACTATGAGGAAGCTTCGGGGCAACAGATAAACTTGGGGAAATCAGTTTTCATGTTGAGCAAGAATGTAAAGACAAAGGAAGGCAAGAGATTAGAAGAGATACTCGGGATAAAAAGAACTTGCTCCTTGGGCAACTACCTGGGAATGCCTTCTCAAAGTAGTAGGCATAAGAACAAAATGTTCGAGAAAATAAAGCATAAAATATCAAAAATGCTTCAAGGATGGAATGAAAGGCTCTTTTCGGCAGGAGGAAAAGAAATCTTGATCAAGGCAGTCATACAAGCAATCCCCACGTACAACATGAGCTGTTTCAAACTTCCAAAAGGGCTATGTGATGAAATCAACAAAATGTGTGCAAGATTTTGGTGGGGAGATGTGGGAGATAGAAAGAAAATACACTGGGCCAGCTAGAGGAAACTATGTAAAAGCAAAGATATGGGAGGCCTTGGTTTTAGAGACCTAAATCTATTCAATAAGGCCCTCCTAGCAAAGCAAAGCTGGAGAATAATTAGAGACCCCGACAGCATGCTAAGCAAAGTTCTAAAGGGACGATATTTTAGAACAGGGGACTTTCTAAATGCGCCTGAAGGTAACAATGCCTCTTACGCTTGGAAAAGCATAGTGTGGGGAAGGGAGCTTTTTAAACACGGGCTCCGTTGGCGCGTGGGAAACGGAAGACATCTTTATAGATCTTGACCCTTGGATCCCTAGACAAGGGCAGAGGACTCCCCTGCGAACCCCTGAAGAATGGCAGGGAAAACGAGTCAATGAGCTGATTAAGGCCAACGGAGAATGGAATGAGAGCCTAGTTAAGGAACTTTTTATCCCGATGGATGCAGAAGACATCCTTGCTATTCCCCTTGGTCGCCAGGATGAGAAAGACGAATTCATATGGAATGCTGACCCCAAAGGACTGTTTAACGTCGAGAGTGCCTATCACCTGGCCATGAACCTCTCCCAAGCTAACGAAACTTCTGGATCAAACAACAACAGACCAAAAAAGAAATGGCAAAACATATGGAAGCTTAATATAATACCAAAAGCCAAGCTCTACTGTTGGAGAATCCTAAAAAATCTAATTCCTACTAAAGAAAATCTAATTTCTAAAGGTTTGGATATTAATCCTTTATGTGACTTGTGCAGGTGCTCGAGAGAAGATACAAATCACATCCTATGGAATTGCAAGCAGGTAAAGCAAATTTGGATGGAATTCTTCCCCACACTTATGGATTTCTTTGATGGTTATAGGAAGGAGATAATGTCACCAGAAAGTTGGGAGAGGATAAATGATCGTAAAGTTGGGAGAGGATAAATGATCGTATGAACAGAGAAGAGATGGAGCAATTCGCAATTATAGCTTGGACAATCTGGAGCTATCGGAGCAAAGTCTCCCTCAACAAGGAGAAGGCAGACATCCAAACTCTCAAGAGATGGATCAAGAAAAACTTAGAAAAGCAGAAGAAAAGGCTGATGAACATACCAAATCCCAGATTGGAGAGCCTCTGAATTAGGAAGCTTGGACTCCCCCTCCACCGAATTGTCTGAAATTGAACGCAGATGCTTCATGGAATGAAGATCGTAAAATTGGCGGAGTTGGGTGGATTGTTCGTGATTCCTCAGGATGTCCAATTCAAGCGGGTTGCAGACAAATAACAAGGAAATGGCAGATTAAATCCCTTGAGGCGCTGGCAATCAAAGAAGGTCTGAAAGACTACAAATCAAGGGGTCACAGAAGAAATTTACCTCTAATTGTGGAATCAGACGCGATGGAGATCATCATATCCCTGAACCACGAAAGCCTGGACATCTCAGACACCTTGGTGATCCTGAACGAGGTGGAATCCCTTGAGAGTGAATTAGGGGTTGTGGCTTTCGCAAAGTGCCCTAGAATGGGTAACCGAGTTGCGCATTCTTTAGCGCGTGCTTCGGCTGGAATTTCGTCGGAGCATCCCCTGCCGGCCGTTGTTGTCGACAGTAGAATTTTGTTCGGTTTTTCTTTTAACGCTAGCTCTGATTTTGGTCTCTCTTCCACGCTGGAAGATGAGCTTCTTTGTAGGGTGGTTAATCCCCCGTTTTGGCTGGCCTCTTTAATTGAGGAGGAAACTGTTGTAACTACCCCTTTTTCTGTTTAA

mRNA sequence

ATGGCACTCCTCAAGAAGAATTCGCCCCAAAGCGTGGAATCAGACAGGGAGATCCTCTATCCCCCTATTTATTCCTCATATGTGCAGAAGTGTGGGGAAGGGAGCTTTTTAAACACGGGCTCCGTTGGCGCGTGGGAAACGGAAGACATCTTTATAGATCTTGACCCTTGGATCCCTAGACAAGGGCAGAGGACTCCCCTGCGAACCCCTGAAGAATGGCAGGGAAAACGAGTCAATGAGCTGATTAAGGCCAACGGAGAATGGAATGAGAGCCTAGTTAAGGAACTTTTTATCCCGATGGATGCAGAAGACATCCTTGCTATTCCCCTTGGTCGCCAGGATGAGAAAGACGAATTCATATGGAATGCTGACCCCAAAGGACTGTTTAACGTCGAGAGTGCCTATCACCTGGCCATGAACCTCTCCCAAGCTAACGAAACTTCTGGATCAAACAACAACAGACCAAAAAAGAAATGGCAAAACATATGGAAGCTTAATATAATACCAAAAGCCAAGCTCTACTGTTGGAGAATCCTAAAAAATCTAATTCCTACTAAAGAAAATCTAATTTCTAAAGGTTTGGATATTAATCCTTTATGTGACTTGTGCAGGTGCTCGAGAGAAGATACAAATCACATCCTATGGAATTGCAAGCAGGAAGCTTGGACTCCCCCTCCACCGAATTGTCTGAAATTGAACGCAGATGCTTCATGGAATGAAGATCGTAAAATTGGCGGAGTTGGGTGGATTGTTCGTGATTCCTCAGGATGTCCAATTCAAGCGGGTTGCAGACAAATAACAAGGAAATGGCAGATTAAATCCCTTGAGGCGCTGGCAATCAAAGAAGGTCTGAAAGACTACAAATCAAGGGGTCACAGAAGAAATTTACCTCTAATTGTGGAATCAGACGCGATGGAGATCATCATATCCCTGAACCACGAAAGCCTGGACATCTCAGACACCTTGGTGATCCTGAACGAGGTGGAATCCCTTGAGAGTGAATTAGGGGTTGTGGCTTTCGCAAAGTGCCCTAGAATGGGTAACCGAGTTGCGCATTCTTTAGCGCGTGCTTCGGCTGGAATTTCGTCGGAGCATCCCCTGCCGGCCGTTGTTGTCGACAGTAGAATTTTGTTCGGTTTTTCTTTTAACGCTAGCTCTGATTTTGGTCTCTCTTCCACGCTGGAAGATGAGCTTCTTTGTAGGGTGGTTAATCCCCCGTTTTGGCTGGCCTCTTTAATTGAGGAGGAAACTGTTGTAACTACCCCTTTTTCTGTTTAA

Coding sequence (CDS)

ATGGCACTCCTCAAGAAGAATTCGCCCCAAAGCGTGGAATCAGACAGGGAGATCCTCTATCCCCCTATTTATTCCTCATATGTGCAGAAGTGTGGGGAAGGGAGCTTTTTAAACACGGGCTCCGTTGGCGCGTGGGAAACGGAAGACATCTTTATAGATCTTGACCCTTGGATCCCTAGACAAGGGCAGAGGACTCCCCTGCGAACCCCTGAAGAATGGCAGGGAAAACGAGTCAATGAGCTGATTAAGGCCAACGGAGAATGGAATGAGAGCCTAGTTAAGGAACTTTTTATCCCGATGGATGCAGAAGACATCCTTGCTATTCCCCTTGGTCGCCAGGATGAGAAAGACGAATTCATATGGAATGCTGACCCCAAAGGACTGTTTAACGTCGAGAGTGCCTATCACCTGGCCATGAACCTCTCCCAAGCTAACGAAACTTCTGGATCAAACAACAACAGACCAAAAAAGAAATGGCAAAACATATGGAAGCTTAATATAATACCAAAAGCCAAGCTCTACTGTTGGAGAATCCTAAAAAATCTAATTCCTACTAAAGAAAATCTAATTTCTAAAGGTTTGGATATTAATCCTTTATGTGACTTGTGCAGGTGCTCGAGAGAAGATACAAATCACATCCTATGGAATTGCAAGCAGGAAGCTTGGACTCCCCCTCCACCGAATTGTCTGAAATTGAACGCAGATGCTTCATGGAATGAAGATCGTAAAATTGGCGGAGTTGGGTGGATTGTTCGTGATTCCTCAGGATGTCCAATTCAAGCGGGTTGCAGACAAATAACAAGGAAATGGCAGATTAAATCCCTTGAGGCGCTGGCAATCAAAGAAGGTCTGAAAGACTACAAATCAAGGGGTCACAGAAGAAATTTACCTCTAATTGTGGAATCAGACGCGATGGAGATCATCATATCCCTGAACCACGAAAGCCTGGACATCTCAGACACCTTGGTGATCCTGAACGAGGTGGAATCCCTTGAGAGTGAATTAGGGGTTGTGGCTTTCGCAAAGTGCCCTAGAATGGGTAACCGAGTTGCGCATTCTTTAGCGCGTGCTTCGGCTGGAATTTCGTCGGAGCATCCCCTGCCGGCCGTTGTTGTCGACAGTAGAATTTTGTTCGGTTTTTCTTTTAACGCTAGCTCTGATTTTGGTCTCTCTTCCACGCTGGAAGATGAGCTTCTTTGTAGGGTGGTTAATCCCCCGTTTTGGCTGGCCTCTTTAATTGAGGAGGAAACTGTTGTAACTACCCCTTTTTCTGTTTAA

Protein sequence

MALLKKNSPQSVESDREILYPPIYSSYVQKCGEGSFLNTGSVGAWETEDIFIDLDPWIPRQGQRTPLRTPEEWQGKRVNELIKANGEWNESLVKELFIPMDAEDILAIPLGRQDEKDEFIWNADPKGLFNVESAYHLAMNLSQANETSGSNNNRPKKKWQNIWKLNIIPKAKLYCWRILKNLIPTKENLISKGLDINPLCDLCRCSREDTNHILWNCKQEAWTPPPPNCLKLNADASWNEDRKIGGVGWIVRDSSGCPIQAGCRQITRKWQIKSLEALAIKEGLKDYKSRGHRRNLPLIVESDAMEIIISLNHESLDISDTLVILNEVESLESELGVVAFAKCPRMGNRVAHSLARASAGISSEHPLPAVVVDSRILFGFSFNASSDFGLSSTLEDELLCRVVNPPFWLASLIEEETVVTTPFSV
Homology
BLAST of Lcy07g005510 vs. ExPASy TrEMBL
Match: B8AHI8 (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07152 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.7e-39
Identity = 110/318 (34.59%), Postives = 163/318 (51.26%), Query Frame = 0

Query: 38  NTGSVGAWETEDIFIDLDPWIPRQGQRTPLRTPEEWQGKRVNELIKANGEWNESLVKELF 97
           N GS+  W         DPWIPR   R P+      + K V++++K +G W+E+LV  +F
Sbjct: 306 NGGSIRLWR--------DPWIPRNMSRRPITMKRNNRLKWVSDILKPDGSWDENLVSAIF 365

Query: 98  IPMDAEDILAIPLGRQDEKDEFIWNADPKGLFNVESAYHLAMNLSQANETSGSNNNRPKK 157
           +P+D E+IL I +  + E+D   W  D  G F+V SAY LAM +++ +E S S++   KK
Sbjct: 366 LPVDVEEILKIKISSRQEEDFVAWFPDRLGRFSVRSAYQLAMQIARLDECSCSSDYAIKK 425

Query: 158 KWQNIWKLNIIPKAKLYCWRILKNLIPTKENLISKGLDINPLCDLCRCSREDTNHILWNC 217
            W  IW  N+  K K++ WR   N +PT EN   +   I     + R  R+     L+  
Sbjct: 426 GWNLIWSCNVPQKVKIFGWRAATNSLPTMENKKKRNFGI-----VGRNVRQVWLATLF-M 485

Query: 218 KQEAWTPPPPNCLKLNADASWNEDRKIGGVGWIVRDSSGCPIQAGCRQITRKWQIKSLEA 277
             + W+ P P  +KLN D S+      GG+G ++R+S G  I + C  I R       E 
Sbjct: 486 AYKLWSRPKPGWMKLNIDGSYGPQDGRGGIGAVLRESFGRVIFSACGFIGRCNGALESEL 545

Query: 278 LAIKEGLKDYKSRGHRRNLPLIVESDAMEIIISLNHESLDISDTLVILNEVESLESELGV 337
           +A ++GL           LP+ VESD +EII  LN +   +S    I+ E+  L +    
Sbjct: 546 IACRDGL---NLALQWTLLPIAVESDCLEIIQLLNSKEKLLSAEGFIVREIRFLMTGTKE 605

Query: 338 VAFAKCPRMGNRVAHSLA 356
           V+FAK  R  NRV+H LA
Sbjct: 606 VSFAKVHRNQNRVSHFLA 606

BLAST of Lcy07g005510 vs. ExPASy TrEMBL
Match: Q75M12 (Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=P0431G05.11 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.9e-37
Identity = 105/351 (29.91%), Postives = 160/351 (45.58%), Query Frame = 0

Query: 38   NTGSVGAWETEDIFIDLDPWIPRQGQRTPLRTPEEWQGKRVNELIKANGEWNESLVKELF 97
            N  SV  W         DPWIPR   R P+ +    + K V++LI  +G W+ + + + F
Sbjct: 1568 NGNSVRIWR--------DPWIPRDLSRRPVSSKANCRLKWVSDLIAEDGTWDSAKINQYF 1627

Query: 98   IPMDAEDILAIPLGRQDEKDEFIWNADPKGLFNVESAYHLAMNLSQANETSGSNNNRPKK 157
            + +DA+ I  I +  + E+D   W+ D  G F+V SAY LA+ L+  N  S S+++R  K
Sbjct: 1628 LKIDADIIQKICISARLEEDFIAWHPDKTGRFSVRSAYKLALQLADMNNCSSSSSSRLNK 1687

Query: 158  KWQNIWKLNIIPKAKLYCWRILKNLIPTKENLISKGLDINPLCDLCRCSREDTNHILWNC 217
             W+ IWK N+  K +++ WR+  N + T EN   + L+   +C +C   +ED  H L  C
Sbjct: 1688 SWELIWKCNVPQKVRIFAWRVASNSLATMENKKKRNLERFDVCGICDREKEDAGHALCRC 1747

Query: 218  ---------------------------------KQEAWTPPPPNCLKLNADASWNEDRKI 277
                                             +   W  P    +KLN D S++ + + 
Sbjct: 1748 VHANSLWVNLEKGKYVVSVNFPKTTAIKHTPGAENRRWERPRNGWMKLNVDGSFDINSEK 1807

Query: 278  GGVGWIVRDSSGCPIQAGCRQITRKWQIKSLEALAIKEGLKDYKSRGHRRNLPLIVESDA 337
            GG+G I+R+  G  I + CR +         E  A  EGL       H   LP+ VE+D 
Sbjct: 1808 GGIGMILRNCLGNVIFSSCRSLDSCSGPLEAELHACVEGL---HLALHWTLLPIQVETDC 1867

Query: 338  MEIIISLNHESLDISDTLVILNEVESLESELGVVAFAKCPRMGNRVAHSLA 356
              +I  LNH   D S    I  E +SL +    +A +K  R  N ++H LA
Sbjct: 1868 SSVIQLLNHPDKDRSVLANIAQEAKSLMAGDRQIAISKVQRSQNVISHFLA 1907

BLAST of Lcy07g005510 vs. ExPASy TrEMBL
Match: M5XSK0 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa016553mg PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.9e-33
Identity = 110/410 (26.83%), Postives = 176/410 (42.93%), Query Frame = 0

Query: 33  EGSFLNTGS---VGAWETEDIFIDLDPWIPRQGQ-RTPLRTPEEWQGKRVNELIKANG-E 92
           +GS    GS   +G WE        D W+P+    +     PE     +V++LI  +  E
Sbjct: 565 QGSRWQVGSGDTIGIWE--------DRWLPQPNSFQIFSPRPEHSAITKVSDLIHGDSRE 624

Query: 93  WNESLVKELFIPMDAEDILAIPLGRQDEKDEFIWNADPKGLFNVESAYHLAMNL-SQANE 152
           WN  L++ +F P +   I +IPL  +   D  +W+ D KG+F V+SAYH+A +L S    
Sbjct: 625 WNAPLLQNVFFPEEVMLIRSIPLSLRLTPDMLVWHYDKKGMFTVKSAYHVARSLHSSTGR 684

Query: 153 TSGSNNNRPKKKWQNIWKLNIIPKAKLYCWRILKNLIPTKENLISKGLDINPLCDL---- 212
            S SN++   + W  +WK  +  + K + WR++  ++PTK NL  K + ++  C L    
Sbjct: 685 ASSSNSDAVARNWSLLWKAIVPARVKTFWWRVISGILPTKANLARKKVSLDEECMLCEGP 744

Query: 213 ------------------------CRCSR------------------EDTNHILWNCK-- 272
                                   CRC+                   E  N +LWN K  
Sbjct: 745 VKSLIHILRDCPWNNGAHSPKDWVCRCAEQLSSQDFATFLMVGWAIWEARNGLLWNNKKS 804

Query: 273 --------------------------------QEAWTPPPPNCLKLNADASWNEDRKIGG 332
                                           ++ W PP  N LK+N D +W      GG
Sbjct: 805 RHEQVSLHASLRLHDFLRVSNCLGSQSRQGQIKQMWQPPHENSLKINVDGAWKPGTTEGG 864

Query: 333 VGWIVRDSSGCPIQAGCRQITRKWQIKSLEALAIKEGLKDYKSRGHRRNLPLIVESDAME 357
           VG +VRDS+G  +     ++T  +    +EALA +        RG++    ++ ESDA++
Sbjct: 865 VGVVVRDSTGKFVAGCATKLTNVFSAPQVEALAARTNTILAMERGYQN---VVFESDALQ 924

BLAST of Lcy07g005510 vs. ExPASy TrEMBL
Match: M5VU98 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa022115mg PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-32
Identity = 98/359 (27.30%), Postives = 156/359 (43.45%), Query Frame = 0

Query: 55   DPWIPRQGQRTPLRTP-EEWQGKRVNELIKANG--EWNESLVKELFIPMDAEDILAIPLG 114
            D W+PR      + +P +  +  +V+ELI   G  +W+   +  LF+P+D  DI+ IPL 
Sbjct: 1355 DKWVPRPATFAVITSPLDGMENTKVSELICNEGSPQWDLQKLNNLFLPVDVVDIVRIPLS 1414

Query: 115  RQDEKDEFIWNADPKGLFNVESAYHLAMNLSQANE-TSGSNNNRPKKKWQNIWKLNIIPK 174
             +   D  +WN D  GLF V+SAY +A+ ++  +E  S S+N+     W++IW   +  K
Sbjct: 1415 IRAPPDRIVWNYDKHGLFTVKSAYRVALRVTSGDEDESSSSNSDTGMLWRHIWNATVPTK 1474

Query: 175  AKLYCWRILKNLIPTKENLISKGLDINPLCDLCRCSREDTNHIL---------WNCK--- 234
             K++ WR+  +++PTK NLI KG+D+  +C  C    E   H+L         WN     
Sbjct: 1475 LKIFAWRVAHDILPTKANLIKKGVDMQDMCMFCGDITESALHVLAMCPFAVATWNISLLT 1534

Query: 235  -----------------------------------------QEAWTPPPPNCLKLNADAS 294
                                                        W  PP   LK N D +
Sbjct: 1535 RHAHQGVQRSPHEVVGFAQQYVHEFITANDTPSKVTDRVRDPVRWAAPPSGRLKFNFDGA 1594

Query: 295  WNEDRKIGGVGWIVRDSSGCPIQAGCRQITRKWQIKSLEALAIKEGLKDYKSRGHRRNLP 354
            ++     G VG + RD+ G  + A  + +      +  E LA +EG+    S G      
Sbjct: 1595 FDPTSGRGAVGVVARDADGGFVAAVAKSVGEVLSAEHAEILAAREGVALALSLG---TAS 1654

Query: 355  LIVESDAMEIIISLNHESLDISDTLVILNEVESLESELGVVAFAKCPRMGNRVAHSLAR 357
             I E D+  ++ ++     D S+   I+ +V+ L+ +     F   PR  N VAH LAR
Sbjct: 1655 PIFEGDSAVVVSAIKRAGQDYSNIGTIVEDVKHLQQQFPSSLFQFTPREANGVAHRLAR 1710

BLAST of Lcy07g005510 vs. ExPASy TrEMBL
Match: A0A803NTN0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-31
Identity = 109/406 (26.85%), Postives = 174/406 (42.86%), Query Frame = 0

Query: 54   LDPWIPRQGQRTPLRTPEEWQGK---RVNELIKANGEWNESLVKELFIPMDAEDILAIPL 113
            +DPWIP      P+     +QG     V+  I    EWN  L+   F P+D E IL IPL
Sbjct: 649  IDPWIPSHTNFKPV----SFQGSSSLSVSTFITDQREWNIDLLNSYFQPIDVEKILTIPL 708

Query: 114  GRQDEKDEFIWNADPKGLFNVESAYHLAMNLSQANETSGSNNNRPKKKWQNIWKLNIIPK 173
                ++D  IW+    G++NV+S +HLA  L + N++S S+ NR    W+  W LN+ PK
Sbjct: 709  SFFADQDRLIWHHSSSGIYNVKSGFHLATALEEQNDSSTSDPNR--GWWKYFWNLNLPPK 768

Query: 174  AKLYCWRILKNLIPTKENLISKGLDINPLCDLCRCSREDTNHILWNC------------- 233
             +++ W++L N++P    L  K +  +  C LC  S E   H L+ C             
Sbjct: 769  IRIFAWKVLNNVLPVAAALFKKKIIDSAACSLCTSSWESIGHALFGCKHARNIWKESKFS 828

Query: 234  ------------------------------------------------------------ 293
                                                                        
Sbjct: 829  LDFTQARTMTNARLNSSIVAFVTGLHQDFSRAKTSAKTSNTAAGSPLPVDSQPPCHTRSQ 888

Query: 294  KQEAWTPPPPNCLKLNADASW-NEDRKIGGVGWIVRDSSGCPIQAGCRQITRKWQIKSLE 353
            K+  W+PP  N  KLN DA+  +ED+K+ GVG ++RD +G  I A  +     ++   +E
Sbjct: 889  KEVPWSPPCVNGYKLNVDAATISEDKKL-GVGAVLRDHNGIVIAALSKMAQGSFRSDEME 948

Query: 354  ALAIKEGLKDYKSRGHRRNLPLI-VESDAMEIIISLNHESLDISDTLVILNEVESLESEL 374
            A A+   L    +   +  LP+  +E+DA+ +  +LN  S+D+S    ++ +V  L S  
Sbjct: 949  AKALFHAL----NWASQSQLPITHIETDALRVSAALNSNSVDLSCFSDLITDVRCLLSFF 1008

BLAST of Lcy07g005510 vs. NCBI nr
Match: EEC73134.1 (hypothetical protein OsI_07152 [Oryza sativa Indica Group])

HSP 1 Score: 172.2 bits (435), Expect = 9.8e-39
Identity = 110/318 (34.59%), Postives = 163/318 (51.26%), Query Frame = 0

Query: 38  NTGSVGAWETEDIFIDLDPWIPRQGQRTPLRTPEEWQGKRVNELIKANGEWNESLVKELF 97
           N GS+  W         DPWIPR   R P+      + K V++++K +G W+E+LV  +F
Sbjct: 306 NGGSIRLWR--------DPWIPRNMSRRPITMKRNNRLKWVSDILKPDGSWDENLVSAIF 365

Query: 98  IPMDAEDILAIPLGRQDEKDEFIWNADPKGLFNVESAYHLAMNLSQANETSGSNNNRPKK 157
           +P+D E+IL I +  + E+D   W  D  G F+V SAY LAM +++ +E S S++   KK
Sbjct: 366 LPVDVEEILKIKISSRQEEDFVAWFPDRLGRFSVRSAYQLAMQIARLDECSCSSDYAIKK 425

Query: 158 KWQNIWKLNIIPKAKLYCWRILKNLIPTKENLISKGLDINPLCDLCRCSREDTNHILWNC 217
            W  IW  N+  K K++ WR   N +PT EN   +   I     + R  R+     L+  
Sbjct: 426 GWNLIWSCNVPQKVKIFGWRAATNSLPTMENKKKRNFGI-----VGRNVRQVWLATLF-M 485

Query: 218 KQEAWTPPPPNCLKLNADASWNEDRKIGGVGWIVRDSSGCPIQAGCRQITRKWQIKSLEA 277
             + W+ P P  +KLN D S+      GG+G ++R+S G  I + C  I R       E 
Sbjct: 486 AYKLWSRPKPGWMKLNIDGSYGPQDGRGGIGAVLRESFGRVIFSACGFIGRCNGALESEL 545

Query: 278 LAIKEGLKDYKSRGHRRNLPLIVESDAMEIIISLNHESLDISDTLVILNEVESLESELGV 337
           +A ++GL           LP+ VESD +EII  LN +   +S    I+ E+  L +    
Sbjct: 546 IACRDGL---NLALQWTLLPIAVESDCLEIIQLLNSKEKLLSAEGFIVREIRFLMTGTKE 605

Query: 338 VAFAKCPRMGNRVAHSLA 356
           V+FAK  R  NRV+H LA
Sbjct: 606 VSFAKVHRNQNRVSHFLA 606

BLAST of Lcy07g005510 vs. NCBI nr
Match: AAS55787.1 (hypothetical protein [Oryza sativa Japonica Group] >AAV32224.1 hypothetical protein [Oryza sativa Japonica Group])

HSP 1 Score: 164.5 bits (415), Expect = 2.0e-36
Identity = 105/351 (29.91%), Postives = 160/351 (45.58%), Query Frame = 0

Query: 38   NTGSVGAWETEDIFIDLDPWIPRQGQRTPLRTPEEWQGKRVNELIKANGEWNESLVKELF 97
            N  SV  W         DPWIPR   R P+ +    + K V++LI  +G W+ + + + F
Sbjct: 1568 NGNSVRIWR--------DPWIPRDLSRRPVSSKANCRLKWVSDLIAEDGTWDSAKINQYF 1627

Query: 98   IPMDAEDILAIPLGRQDEKDEFIWNADPKGLFNVESAYHLAMNLSQANETSGSNNNRPKK 157
            + +DA+ I  I +  + E+D   W+ D  G F+V SAY LA+ L+  N  S S+++R  K
Sbjct: 1628 LKIDADIIQKICISARLEEDFIAWHPDKTGRFSVRSAYKLALQLADMNNCSSSSSSRLNK 1687

Query: 158  KWQNIWKLNIIPKAKLYCWRILKNLIPTKENLISKGLDINPLCDLCRCSREDTNHILWNC 217
             W+ IWK N+  K +++ WR+  N + T EN   + L+   +C +C   +ED  H L  C
Sbjct: 1688 SWELIWKCNVPQKVRIFAWRVASNSLATMENKKKRNLERFDVCGICDREKEDAGHALCRC 1747

Query: 218  ---------------------------------KQEAWTPPPPNCLKLNADASWNEDRKI 277
                                             +   W  P    +KLN D S++ + + 
Sbjct: 1748 VHANSLWVNLEKGKYVVSVNFPKTTAIKHTPGAENRRWERPRNGWMKLNVDGSFDINSEK 1807

Query: 278  GGVGWIVRDSSGCPIQAGCRQITRKWQIKSLEALAIKEGLKDYKSRGHRRNLPLIVESDA 337
            GG+G I+R+  G  I + CR +         E  A  EGL       H   LP+ VE+D 
Sbjct: 1808 GGIGMILRNCLGNVIFSSCRSLDSCSGPLEAELHACVEGL---HLALHWTLLPIQVETDC 1867

Query: 338  MEIIISLNHESLDISDTLVILNEVESLESELGVVAFAKCPRMGNRVAHSLA 356
              +I  LNH   D S    I  E +SL +    +A +K  R  N ++H LA
Sbjct: 1868 SSVIQLLNHPDKDRSVLANIAQEAKSLMAGDRQIAISKVQRSQNVISHFLA 1907

BLAST of Lcy07g005510 vs. NCBI nr
Match: XP_024033483.1 (uncharacterized protein LOC112095606 [Citrus clementina])

HSP 1 Score: 147.5 bits (371), Expect = 2.6e-31
Identity = 99/373 (26.54%), Postives = 163/373 (43.70%), Query Frame = 0

Query: 48  EDIFIDLDPWIPRQGQRTPLRTPEEWQGKRVNELIKANGEWNESLVKELFIPMDAEDILA 107
           + I I  D WIP+     P+  P   +   V ELI    +W+ES +   F  MDA+ I+ 
Sbjct: 308 QKIQIHKDNWIPKPSTFKPIVRPSLPEDTLVAELINEENQWDESQIYRHFNRMDADKIVE 367

Query: 108 IPLGRQDEKDEFIWNADPKGLFNVESAYHLAMNLSQANETSGSNNNRPKKKWQNIWKLNI 167
           IPL R  ++D  IW+ D KGL++V+S Y  A++L        S +   K +W  IW L +
Sbjct: 368 IPLPRSPKEDTIIWHYDKKGLYSVKSGYQTALSLKFPAMPLSSMSG--KNQWNIIWTLAL 427

Query: 168 IPKAKLYCWRILKNLIPTKENLISKGLDINPLCDLCRCSREDTNHILWNCK--------- 227
             K +++ WR  KN++P+ ENL  + +   P C + +   E+  H L  CK         
Sbjct: 428 PEKIRIFAWRAAKNILPSAENLWKRKIIQEPTCQVRKLGVENVFHALVECKAARKIWKLT 487

Query: 228 -------------------------------------------------------QEAWT 287
                                                                  Q+ W 
Sbjct: 488 LLENDIMQTAGNEMLFKGKRENPQALVAKAEAVMEAYKRIQKPEQARMESQQVQAQQVWN 547

Query: 288 PPPPNCLKLNADASWNEDRKIGGVGWIVRDSSGCPIQAGCRQITRKWQIKSLEALAIKEG 347
           PP    +K+N DA+ + ++ + G+G I+RD  G  I A  +       +   EA A++ G
Sbjct: 548 PPQSGFVKVNVDAATSSEKHLAGLGAIIRDDRGNVIAAAIKISKFHGDVSFAEAEALEWG 607

Query: 348 LKDYKSRGHRRNLPLIVESDAMEIIISLNHESLDISDTLVILNEVESLESELGVVAFAKC 357
           L+  ++   +    LIVESDA  ++  +N++    S+   I++E+++L     +V+    
Sbjct: 608 LQIARNASTK---ALIVESDAQSVVNLVNNKQGGNSEIFWIISEIQNLMRTFDLVSINYT 667

BLAST of Lcy07g005510 vs. NCBI nr
Match: XP_042965938.1 (uncharacterized protein LOC122299618 [Carya illinoinensis])

HSP 1 Score: 146.4 bits (368), Expect = 5.8e-31
Identity = 87/316 (27.53%), Postives = 148/316 (46.84%), Query Frame = 0

Query: 77  RVNELIKANGEWNESLVKELFIPMDAEDILAIPLGRQDEKDEFIWNADPKGLFNVESAYH 136
           RV+EL+ +NGEW+  L+K +F   + E I +IP+ + + +D+ IW     G F + SAY 
Sbjct: 686 RVSELV-SNGEWDVQLLKNIFRQEEVEQICSIPISKSNAEDKLIWGCTTTGFFTIRSAYQ 745

Query: 137 LAMNLSQANETSGSNNNRPKKKWQNIWKLNIIPKAKLYCWRILKNLIPTKENLISKGLDI 196
           L M+ ++  +   S       +WQ+IW LNI  K KL+ WR +K+L+ T+ NL+ + +  
Sbjct: 746 LEMSRNEVAKGENSKRREGDNRWQSIWDLNIQEKVKLFMWRAMKSLLATRSNLVMRKIID 805

Query: 197 NPLCDLCRCSREDTNHILWNC----------------------------KQEAWTPPPPN 256
           N  C +C+   E T+H LW+C                            +   W+ P   
Sbjct: 806 NSKCPICKAEEETTSHALWSCPAAIDVWAESLKVTQKWKSEETDLRSERRNVRWSRPREQ 865

Query: 257 CLKLNADASWNEDRKIGGVGWIVRDSSGCPIQAGCRQITRKWQIKSLEALAIKEGLKDYK 316
            +K N DA+ ++     G+G ++RD  G  + A   Q+         E+ A+++ L+  +
Sbjct: 866 AVKANWDAAVDKKEGKVGIGVVIRDEEGEVLVATGEQMNYMTDAAIAESFALRKALEVCR 925

Query: 317 SRGHRRNLPLIVESDAMEIIISLNHESLDISDTLVILNEVESLESELGVVAFAKCPRMGN 365
                    +  E DA  I+ ++N E+ D+S    ++ +V++L         +   R  N
Sbjct: 926 DLNFNN---VWFEGDAQNIVNAVNTETEDMSRYGSVIEDVKNLLKGRKKWRVSFVFREAN 985

BLAST of Lcy07g005510 vs. NCBI nr
Match: EEC68026.1 (hypothetical protein OsI_35837 [Oryza sativa Indica Group])

HSP 1 Score: 145.6 bits (366), Expect = 9.8e-31
Identity = 86/286 (30.07%), Postives = 146/286 (51.05%), Query Frame = 0

Query: 78  VNELIKANGEWNESLVKELFIPMDAEDILAIPLGRQDEKDEFIWNADPKGLFNVESAYHL 137
           V++LIK +G W+   + ++F+P+DA+ IL I L  + E+D   W+ D  G+F+V SAYHL
Sbjct: 528 VSDLIKPDGTWDSDRINQIFLPLDADLILNIRLSARQEEDFLSWHPDRLGVFSVRSAYHL 587

Query: 138 AMNLSQANETSGSNNNRPKKKWQNIWKLNIIPKAKLYCWRILKNLIPTKENLISKGLDIN 197
           A++L++   +S S++   +K W  +WK  +  K K++ W+   N +PT EN   + L+ +
Sbjct: 588 ALSLNEMASSSSSSDENLRKTWDCLWKSKVPQKVKIHAWKAASNSLPTMENKKKRNLEAS 647

Query: 198 PLCDLCRCSREDTNHILWNCKQEAWTPPPPNCLKLNADASWNEDRKIGGVGWIVRDSSGC 257
            +C +                   WT P    +KLN D S++     GG+G I+R+++G 
Sbjct: 648 EICKI--------------QPPVPWTKPQLGWMKLNIDGSFDASLNQGGIGAILRNNAGS 707

Query: 258 PIQAGCRQITRKWQIKSLEALAIKEGLKDYKSRGHRRNLPLIVESDAMEIIISLNHESLD 317
            I + C  I R       E LA KEG+           LP+ +E+D +E  ++LN  + +
Sbjct: 708 VIFSACGFIERCRSALEAELLACKEGI---IMALQWTLLPICIETDCLE-AVNLNQSANN 767

Query: 318 ISDTLV-ILNEVESLESELGVVAFAKCPRMGNRVAHSLARASAGIS 363
           +   L  ++ E+  L S    +   K  R  + V+H LA     +S
Sbjct: 768 VRSELAHLIREIGELISGNREITIKKMLRCQDTVSHFLANRGRTVS 795

BLAST of Lcy07g005510 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 3.0e-17
Identity = 54/178 (30.34%), Postives = 83/178 (46.63%), Query Frame = 0

Query: 48  EDIFIDLDPWIPRQGQRTPLRTPEEWQGKRVNELIKANGE---WNESLVKELFIPMDAED 107
           ++I I LD  +     R PL T E ++   +N L +  G    W++S + +     D   
Sbjct: 46  QNIRIGLDNIVDSHPPR-PLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGF 105

Query: 108 ILAIPLGRQDEKDEFIWNADPKGLFNVESAYHL-----AMNLSQANETSGSNNNRPKKKW 167
           I  I L +  + D+ IWN +  G + V S Y L     + N+   N   GS + + +   
Sbjct: 106 IHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTR--- 165

Query: 168 QNIWKLNIIPKAKLYCWRILKNLIPTKENLISKGLDINPLCDLCRCSREDTNHILWNC 218
             IW L I+PK K + WR L   + T E L ++G+ I+P C  C    E  NH L+ C
Sbjct: 166 --IWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTC 217

BLAST of Lcy07g005510 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 1.3e-12
Identity = 64/228 (28.07%), Postives = 101/228 (44.30%), Query Frame = 0

Query: 163 WKLNI---IPK----AKLYCWRILKNLIPTKENLISKGLDINPLCDLCRCSREDTNHILW 222
           W LN+   IPK      L  W +L  L  ++  L+ KG + +   ++ R + ED     W
Sbjct: 59  WVLNLEVEIPKLGKIGNLVPW-LLWRLWKSRNELMFKGKEYD-APEVLRRAMEDFEE--W 118

Query: 223 NCKQE----------------AWTPPPPNCLKLNADASWNEDRKIGGVGWIVRDSSGCPI 282
           + ++E                 W  PP   +K N DA+W  +    G+GWI+R+ SG  +
Sbjct: 119 STRRELEGKASGPQVERNLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVL 178

Query: 283 QAGCRQITRKWQIKSLEALAIKEGLKDYKSRGHRRNLPLIVESDAMEIIISLNHESLDIS 342
             G R + R   +   E  A++  +       ++R   +I ESDA  ++  LN +  D  
Sbjct: 179 WMGARALPRTKNVLEAELEALRWAVLTMSRFNYKR---IIFESDAQALVNLLNSD--DFW 238

Query: 343 DTL-VILNEVESLESELGVVAFAKCPRMGNRVAHSLARASAGISSEHP 367
            TL   L +++ L      V F   PR GN+VA  +AR S   S+  P
Sbjct: 239 PTLQPALEDIQQLLHHFEEVKFEFTPRGGNKVADRIARESISFSNYDP 277

BLAST of Lcy07g005510 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 4.9e-12
Identity = 55/215 (25.58%), Postives = 94/215 (43.72%), Query Frame = 0

Query: 176 WRILKNLIPTKENLISKGLDINPLCDLCRCSREDTNHILWNCKQEA-------------- 235
           WR+ KN    +  L+ +G + N   ++ R + +D     W  + EA              
Sbjct: 365 WRLWKN----RNELVFRGREFNAQ-EVLRRAEDDLEE--WRIRTEAESCGTKPQVNRSSC 424

Query: 236 --WTPPPPNCLKLNADASWNEDRKIGGVGWIVRDSSGCPIQAGCRQITRKWQIKSLEALA 295
             W PPP   +K N DA+WN D +  G+GW++R+  G     G R + +   +   E  A
Sbjct: 425 GRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEA 484

Query: 296 IKEGLKDYKSRGHRRNLPLIVESDAMEIIISLNHESLDISDTLVILNEVESLESELGVVA 355
           ++  +       +     +I ESD+  +I  LN++ +  S     + +++ L S+   V 
Sbjct: 485 MRWAVLSLSRFQYNY---VIFESDSQVLIEILNNDEIWPS-LKPTIQDLQRLLSQFTEVK 544

Query: 356 FAKCPRMGNRVAHSLARASAGISSEHPLPAVVVDS 375
           F   PR GN +A  +AR S    +  P    +V S
Sbjct: 545 FVFIPREGNTLAERVARESLSFLNYDPKLYSIVPS 568

BLAST of Lcy07g005510 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-08
Identity = 24/65 (36.92%), Postives = 36/65 (55.38%), Query Frame = 0

Query: 160 QNIWKLNIIPKAKLYCWRILKNLIPTKENLISKGLDINPLCDLCRCSREDTNHILWNC-- 219
           Q IWKL++ PK K + WR +   + T   L S+ +D +P+C  C    E  +HI++NC  
Sbjct: 35  QAIWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPY 94

Query: 220 KQEAW 223
            Q  W
Sbjct: 95  TQSVW 99

BLAST of Lcy07g005510 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 56.6 bits (135), Expect = 5.6e-08
Identity = 25/57 (43.86%), Postives = 32/57 (56.14%), Query Frame = 0

Query: 161 NIWKLNIIPKAKLYCWRILKNLIPTKENLISKGLDINPLCDLCRCSREDTNHILWNC 218
           +IW L I PK KL  W+ L N +P    L+S+ + I P C  CR   E   HIL+NC
Sbjct: 8   DIWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRCR-DFETITHILFNC 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
B8AHI84.7e-3934.59Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07152 PE=4... [more]
Q75M129.9e-3729.91Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. japonica ... [more]
M5XSK03.9e-3326.83Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU... [more]
M5VU982.5e-3227.30Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU... [more]
A0A803NTN02.1e-3126.85Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
EEC73134.19.8e-3934.59hypothetical protein OsI_07152 [Oryza sativa Indica Group][more]
AAS55787.12.0e-3629.91hypothetical protein [Oryza sativa Japonica Group] >AAV32224.1 hypothetical prot... [more]
XP_024033483.12.6e-3126.54uncharacterized protein LOC112095606 [Citrus clementina][more]
XP_042965938.15.8e-3127.53uncharacterized protein LOC122299618 [Carya illinoinensis][more]
EEC68026.19.8e-3130.07hypothetical protein OsI_35837 [Oryza sativa Indica Group][more]
Match NameE-valueIdentityDescription
AT3G09510.13.0e-1730.34Ribonuclease H-like superfamily protein [more]
AT2G34320.11.3e-1228.07Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT4G29090.14.9e-1225.58Ribonuclease H-like superfamily protein [more]
AT2G02650.11.9e-0836.92Ribonuclease H-like superfamily protein [more]
AT3G26855.15.6e-0843.86RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 229..359
e-value: 5.1E-10
score: 41.5
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 129..221
e-value: 1.0E-15
score: 58.2
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 233..357
e-value: 7.6E-17
score: 61.3
NoneNo IPR availablePANTHERPTHR33033POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 219..361
NoneNo IPR availablePANTHERPTHR33033:SF67SUBFAMILY NOT NAMEDcoord: 219..361
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 232..356
e-value: 5.2275E-19
score: 80.436
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 229..360

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g005510.1Lcy07g005510.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity