Lcy07g004570 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTTAATTGAAGACAATAACTTTGAGAATTGTGATTTTGACAACGATGATGATGCTCTATACATCTTTTTCAATTTATTGTATGTTGGTTTTCACAAGATGCAATCTTCTAGACAACCATGTAGGACGTCTTCACTAAAAGGTCATGATTATGTGATCGAGTTGTTAAATGGCAACGACACAAGATGTTTTGATTGCTTTAGGATGAAGAAAGGTACATTCATAGCTTTATGTGAAGATTTAAAAGCTAAGACGAATCTAAAAGCGTTTAGGTATCTTACTGTTCAAGAGAAAGTTGCCATTTTTTTATTAATCATATCACATAATGAAAGAAATTGTATAGCAGCAGAAAAGTTTCAACATTCTGGTCAAACTATTTCTCGAGTTTTTAACCTTGTTTTGAAAAAAAAATTTGCAAGCTTGGAGTAGAAATTATTTGTCCACCCAACGTAGACACTGTACCACCAGAGATCATGTCCAAGCCTAAATATTATCCTTTCTTTAAGGTAATGGTTTGATTTTTTTTTCGCAGAGAACATTTTGAAAATATATTTATGCTTACGTTTATGCTTACGTTTATGCTTATTTTTCAGGATTGTATTGGTGCAATTGACAGCACTCATATTGCTGCATGTATTCCCCTAAACAAACAAATACCATTTCGTGGTAGAAAAACTAACACAACATGGAATATAATGTGTGTCTGTTCGTTTAATATGTTATTCACATATGTCATGCCTGGTTGGGAGGGGTCGGCCAATGATTCTCGTATACTCCTTGAATGTATCAAACATCCTGATAATAAATTTCCTATGCCTAAAGAAGGTATATAA ATGAATTTAATTGAAGACAATAACTTTGAGAATTGTGATTTTGACAACGATGATGATGCTCTATACATCTTTTTCAATTTATTGTATGTTGGTTTTCACAAGATGCAATCTTCTAGACAACCATGTAGGACGTCTTCACTAAAAGGTCATGATTATGTGATCGAGTTGTTAAATGGCAACGACACAAGATGTTTTGATTGCTTTAGGATGAAGAAAGGTACATTCATAGCTTTATGTGAAGATTTAAAAGCTAAGACGAATCTAAAAGCGTTTAGGTATCTTACTGTTCAAGAGAAAGTTGCCATTTTTTTATTAATCATATCACATAATGAAAGAAATTGTATAGCAGCAGAAAAGTTTCAACATTCTGGTCAAACTATTTCTCGAGATTGTATTGGTGCAATTGACAGCACTCATATTGCTGCATGTATTCCCCTAAACAAACAAATACCATTTCGTGGTAGAAAAACTAACACAACATGGAATATAATGTGTGTCTGTTCGTTTAATATGTTATTCACATATGTCATGCCTGGTTGGGAGGGGTCGGCCAATGATTCTCGTATACTCCTTGAATGTATCAAACATCCTGATAATAAATTTCCTATGCCTAAAGAAGGTATATAA ATGAATTTAATTGAAGACAATAACTTTGAGAATTGTGATTTTGACAACGATGATGATGCTCTATACATCTTTTTCAATTTATTGTATGTTGGTTTTCACAAGATGCAATCTTCTAGACAACCATGTAGGACGTCTTCACTAAAAGGTCATGATTATGTGATCGAGTTGTTAAATGGCAACGACACAAGATGTTTTGATTGCTTTAGGATGAAGAAAGGTACATTCATAGCTTTATGTGAAGATTTAAAAGCTAAGACGAATCTAAAAGCGTTTAGGTATCTTACTGTTCAAGAGAAAGTTGCCATTTTTTTATTAATCATATCACATAATGAAAGAAATTGTATAGCAGCAGAAAAGTTTCAACATTCTGGTCAAACTATTTCTCGAGATTGTATTGGTGCAATTGACAGCACTCATATTGCTGCATGTATTCCCCTAAACAAACAAATACCATTTCGTGGTAGAAAAACTAACACAACATGGAATATAATGTGTGTCTGTTCGTTTAATATGTTATTCACATATGTCATGCCTGGTTGGGAGGGGTCGGCCAATGATTCTCGTATACTCCTTGAATGTATCAAACATCCTGATAATAAATTTCCTATGCCTAAAGAAGGTATATAA MNLIEDNNFENCDFDNDDDALYIFFNLLYVGFHKMQSSRQPCRTSSLKGHDYVIELLNGNDTRCFDCFRMKKGTFIALCEDLKAKTNLKAFRYLTVQEKVAIFLLIISHNERNCIAAEKFQHSGQTISRDCIGAIDSTHIAACIPLNKQIPFRGRKTNTTWNIMCVCSFNMLFTYVMPGWEGSANDSRILLECIKHPDNKFPMPKEGI Homology
BLAST of Lcy07g004570 vs. ExPASy TrEMBL
Match: A0A1S3E695 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=3827 GN=LOC105852030 PE=3 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45 Identity = 99/243 (40.74%), Postives = 136/243 (55.97%), Query Frame = 0
BLAST of Lcy07g004570 vs. ExPASy TrEMBL
Match: A0A3Q7Y331 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=3827 GN=LOC105852522 PE=3 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45 Identity = 99/243 (40.74%), Postives = 136/243 (55.97%), Query Frame = 0
BLAST of Lcy07g004570 vs. ExPASy TrEMBL
Match: A0A4Y7J673 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_014815 PE=3 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 5.3e-44 Identity = 95/233 (40.77%), Postives = 130/233 (55.79%), Query Frame = 0
BLAST of Lcy07g004570 vs. ExPASy TrEMBL
Match: A0A438CFP0 (Protein ALP1-like OS=Vitis vinifera OX=29760 GN=VvCHDh000000_4 PE=3 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 6.5e-42 Identity = 89/234 (38.03%), Postives = 131/234 (55.98%), Query Frame = 0
BLAST of Lcy07g004570 vs. ExPASy TrEMBL
Match: A0A438FKK5 (Protein ALP1-like OS=Vitis vinifera OX=29760 GN=VvCHDh000000_17 PE=3 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 1.9e-41 Identity = 92/252 (36.51%), Postives = 138/252 (54.76%), Query Frame = 0
BLAST of Lcy07g004570 vs. NCBI nr
Match: KAF7148819.1 (hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii]) HSP 1 Score: 226.1 bits (575), Expect = 2.8e-55 Identity = 109/238 (45.80%), Postives = 143/238 (60.08%), Query Frame = 0
BLAST of Lcy07g004570 vs. NCBI nr
Match: KAF7123090.1 (hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii]) HSP 1 Score: 224.2 bits (570), Expect = 1.1e-54 Identity = 110/246 (44.72%), Postives = 144/246 (58.54%), Query Frame = 0
BLAST of Lcy07g004570 vs. NCBI nr
Match: XP_030486358.1 (protein ALP1-like isoform X1 [Cannabis sativa]) HSP 1 Score: 216.9 bits (551), Expect = 1.7e-52 Identity = 103/233 (44.21%), Postives = 145/233 (62.23%), Query Frame = 0
BLAST of Lcy07g004570 vs. NCBI nr
Match: XP_030497764.1 (protein ALP1-like [Cannabis sativa]) HSP 1 Score: 213.4 bits (542), Expect = 1.9e-51 Identity = 102/233 (43.78%), Postives = 145/233 (62.23%), Query Frame = 0
BLAST of Lcy07g004570 vs. NCBI nr
Match: XP_030481634.1 (protein ALP1-like [Cannabis sativa]) HSP 1 Score: 212.6 bits (540), Expect = 3.2e-51 Identity = 96/216 (44.44%), Postives = 140/216 (64.81%), Query Frame = 0
BLAST of Lcy07g004570 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 116.3 bits (290), Expect = 2.9e-26 Identity = 63/201 (31.34%), Postives = 101/201 (50.25%), Query Frame = 0
BLAST of Lcy07g004570 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 85.9 bits (211), Expect = 4.2e-17 Identity = 34/78 (43.59%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of Lcy07g004570 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 75.5 bits (184), Expect = 5.7e-14 Identity = 50/218 (22.94%), Postives = 84/218 (38.53%), Query Frame = 0
BLAST of Lcy07g004570 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.6 bits (174), Expect = 8.2e-13 Identity = 49/174 (28.16%), Postives = 77/174 (44.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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