Lcy07g004570 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g004570
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionProtein ALP1-like
LocationChr07: 24512308 .. 24513143 (+)
RNA-Seq ExpressionLcy07g004570
SyntenyLcy07g004570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTAATTGAAGACAATAACTTTGAGAATTGTGATTTTGACAACGATGATGATGCTCTATACATCTTTTTCAATTTATTGTATGTTGGTTTTCACAAGATGCAATCTTCTAGACAACCATGTAGGACGTCTTCACTAAAAGGTCATGATTATGTGATCGAGTTGTTAAATGGCAACGACACAAGATGTTTTGATTGCTTTAGGATGAAGAAAGGTACATTCATAGCTTTATGTGAAGATTTAAAAGCTAAGACGAATCTAAAAGCGTTTAGGTATCTTACTGTTCAAGAGAAAGTTGCCATTTTTTTATTAATCATATCACATAATGAAAGAAATTGTATAGCAGCAGAAAAGTTTCAACATTCTGGTCAAACTATTTCTCGAGTTTTTAACCTTGTTTTGAAAAAAAAATTTGCAAGCTTGGAGTAGAAATTATTTGTCCACCCAACGTAGACACTGTACCACCAGAGATCATGTCCAAGCCTAAATATTATCCTTTCTTTAAGGTAATGGTTTGATTTTTTTTTCGCAGAGAACATTTTGAAAATATATTTATGCTTACGTTTATGCTTACGTTTATGCTTATTTTTCAGGATTGTATTGGTGCAATTGACAGCACTCATATTGCTGCATGTATTCCCCTAAACAAACAAATACCATTTCGTGGTAGAAAAACTAACACAACATGGAATATAATGTGTGTCTGTTCGTTTAATATGTTATTCACATATGTCATGCCTGGTTGGGAGGGGTCGGCCAATGATTCTCGTATACTCCTTGAATGTATCAAACATCCTGATAATAAATTTCCTATGCCTAAAGAAGGTATATAA

mRNA sequence

ATGAATTTAATTGAAGACAATAACTTTGAGAATTGTGATTTTGACAACGATGATGATGCTCTATACATCTTTTTCAATTTATTGTATGTTGGTTTTCACAAGATGCAATCTTCTAGACAACCATGTAGGACGTCTTCACTAAAAGGTCATGATTATGTGATCGAGTTGTTAAATGGCAACGACACAAGATGTTTTGATTGCTTTAGGATGAAGAAAGGTACATTCATAGCTTTATGTGAAGATTTAAAAGCTAAGACGAATCTAAAAGCGTTTAGGTATCTTACTGTTCAAGAGAAAGTTGCCATTTTTTTATTAATCATATCACATAATGAAAGAAATTGTATAGCAGCAGAAAAGTTTCAACATTCTGGTCAAACTATTTCTCGAGATTGTATTGGTGCAATTGACAGCACTCATATTGCTGCATGTATTCCCCTAAACAAACAAATACCATTTCGTGGTAGAAAAACTAACACAACATGGAATATAATGTGTGTCTGTTCGTTTAATATGTTATTCACATATGTCATGCCTGGTTGGGAGGGGTCGGCCAATGATTCTCGTATACTCCTTGAATGTATCAAACATCCTGATAATAAATTTCCTATGCCTAAAGAAGGTATATAA

Coding sequence (CDS)

ATGAATTTAATTGAAGACAATAACTTTGAGAATTGTGATTTTGACAACGATGATGATGCTCTATACATCTTTTTCAATTTATTGTATGTTGGTTTTCACAAGATGCAATCTTCTAGACAACCATGTAGGACGTCTTCACTAAAAGGTCATGATTATGTGATCGAGTTGTTAAATGGCAACGACACAAGATGTTTTGATTGCTTTAGGATGAAGAAAGGTACATTCATAGCTTTATGTGAAGATTTAAAAGCTAAGACGAATCTAAAAGCGTTTAGGTATCTTACTGTTCAAGAGAAAGTTGCCATTTTTTTATTAATCATATCACATAATGAAAGAAATTGTATAGCAGCAGAAAAGTTTCAACATTCTGGTCAAACTATTTCTCGAGATTGTATTGGTGCAATTGACAGCACTCATATTGCTGCATGTATTCCCCTAAACAAACAAATACCATTTCGTGGTAGAAAAACTAACACAACATGGAATATAATGTGTGTCTGTTCGTTTAATATGTTATTCACATATGTCATGCCTGGTTGGGAGGGGTCGGCCAATGATTCTCGTATACTCCTTGAATGTATCAAACATCCTGATAATAAATTTCCTATGCCTAAAGAAGGTATATAA

Protein sequence

MNLIEDNNFENCDFDNDDDALYIFFNLLYVGFHKMQSSRQPCRTSSLKGHDYVIELLNGNDTRCFDCFRMKKGTFIALCEDLKAKTNLKAFRYLTVQEKVAIFLLIISHNERNCIAAEKFQHSGQTISRDCIGAIDSTHIAACIPLNKQIPFRGRKTNTTWNIMCVCSFNMLFTYVMPGWEGSANDSRILLECIKHPDNKFPMPKEGI
Homology
BLAST of Lcy07g004570 vs. ExPASy TrEMBL
Match: A0A1S3E695 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=3827 GN=LOC105852030 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45
Identity = 99/243 (40.74%), Postives = 136/243 (55.97%), Query Frame = 0

Query: 4   IEDNNFENCDFDNDDDALYIFFNLLYVGFHKMQSSRQPCRTSSLKGHDYVIELLNGNDTR 63
           ++ ++    D  +DD   ++  N++Y   HK   ++    TSSL G ++V E+LNG++T 
Sbjct: 11  VDTSDDSTSDESDDDFVEFLISNVIYDYHHKF-FNKGKVLTSSLSGREFVAEVLNGSETS 70

Query: 64  CFDCFRMKKGTFIALCEDLKAKTNLKAFRYLTVQEKVAIFLLIISHNERNCIAAEKFQHS 123
           CFD FRMKK  F+  C +L+ K  L   R + V+EKVA FL II HN R+ +A+ +FQHS
Sbjct: 71  CFDLFRMKKECFLNFCNELRGKNYLSDSRDVLVEEKVATFLFIIGHNVRHRVASNRFQHS 130

Query: 124 GQTISR---------------------------------------DCIGAIDSTHIAACI 183
            +TISR                                       +CIGAID THI+A +
Sbjct: 131 TETISRNFKEVLRAVCRLGKELIKQESIELPERIKNNSKYYPWFKNCIGAIDGTHISAWV 190

Query: 184 PLNKQIPFRGRKTNTTWNIMCVCSFNMLFTYVMPGWEGSANDSRILLECIKHPDNKFPMP 208
           P  KQI  RGRKT  T N+MC C FNM+FTYV  GWEGSA+DS++ L+ I +P+  FP P
Sbjct: 191 PAEKQISCRGRKTTITQNVMCACDFNMMFTYVYSGWEGSAHDSKVFLDAISNPNAGFPWP 250

BLAST of Lcy07g004570 vs. ExPASy TrEMBL
Match: A0A3Q7Y331 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=3827 GN=LOC105852522 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45
Identity = 99/243 (40.74%), Postives = 136/243 (55.97%), Query Frame = 0

Query: 4   IEDNNFENCDFDNDDDALYIFFNLLYVGFHKMQSSRQPCRTSSLKGHDYVIELLNGNDTR 63
           ++ ++    D  +DD   ++  N++Y   HK   ++    TSSL G ++V E+LNG++T 
Sbjct: 21  VDTSDDSTSDESDDDFVEFLISNVIYDYHHKF-FNKGKVLTSSLSGREFVAEVLNGSETS 80

Query: 64  CFDCFRMKKGTFIALCEDLKAKTNLKAFRYLTVQEKVAIFLLIISHNERNCIAAEKFQHS 123
           CFD FRMKK  F+  C +L+ K  L   R + V+EKVA FL II HN R+ +A+ +FQHS
Sbjct: 81  CFDLFRMKKECFLNFCNELRGKNYLSDSRDVLVEEKVATFLFIIGHNVRHRVASNRFQHS 140

Query: 124 GQTISR---------------------------------------DCIGAIDSTHIAACI 183
            +TISR                                       +CIGAID THI+A +
Sbjct: 141 TETISRNFKEVLRAVCRLGKELIKQESIELPERIKNNSKYYPWFKNCIGAIDGTHISAWV 200

Query: 184 PLNKQIPFRGRKTNTTWNIMCVCSFNMLFTYVMPGWEGSANDSRILLECIKHPDNKFPMP 208
           P  KQI  RGRKT  T N+MC C FNM+FTYV  GWEGSA+DS++ L+ I +P+  FP P
Sbjct: 201 PAEKQISCRGRKTTITQNVMCACDFNMMFTYVYSGWEGSAHDSKVFLDAISNPNAGFPWP 260

BLAST of Lcy07g004570 vs. ExPASy TrEMBL
Match: A0A4Y7J673 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_014815 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 5.3e-44
Identity = 95/233 (40.77%), Postives = 130/233 (55.79%), Query Frame = 0

Query: 15  DNDDDALYIFFNLLYVGFHKMQSSRQPCRTSSLKGHDYVIELLNGNDTRCFDCFRMKKGT 74
           D+  D+   F  LL V     +  + P  TS L G +++ ELLNG+  R ++  RM   T
Sbjct: 201 DSSSDSEDSFMELLMVKELHKRYIKIPMMTSVLSGREFIFELLNGHPRRMYNLMRMDPST 260

Query: 75  FIALCEDLKAKTNLKAFRYLTVQEKVAIFLLIISHNERNCIAAEKFQHSGQTISR----- 134
           F+ LC  L+    L+  R ++V+E V IFL  +S + RN + AE FQHS +T+ R     
Sbjct: 261 FMLLCSTLRTNDFLQDDRSVSVEEAVGIFLATVSQSMRNRVVAEMFQHSNETVYRHFKKV 320

Query: 135 -----------------------------------DCIGAIDSTHIAACIPLNKQIPFRG 194
                                              DC+GAID THI+AC+P +KQIPFRG
Sbjct: 321 LKALCRLGCLIIKPPNMDEVPPEIMTNPKFYPWFVDCVGAIDGTHISACVPASKQIPFRG 380

Query: 195 RKTNTTWNIMCVCSFNMLFTYVMPGWEGSANDSRILLECIKHPDNKFPMPKEG 208
           RK   T NIMC CSF+MLFT+V  GWEG+AND+R+L++ I + +NKFPMP+EG
Sbjct: 381 RKAQITQNIMCACSFDMLFTFVYTGWEGTANDARVLMDAISNEENKFPMPREG 433

BLAST of Lcy07g004570 vs. ExPASy TrEMBL
Match: A0A438CFP0 (Protein ALP1-like OS=Vitis vinifera OX=29760 GN=VvCHDh000000_4 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 6.5e-42
Identity = 89/234 (38.03%), Postives = 131/234 (55.98%), Query Frame = 0

Query: 15  DNDDDALYIFFNLLYVGFHKMQSSRQPCRTSSLKGHDYVIELLNGNDTRCFDCFRMKKGT 74
           +  DD   IF   +   + ++   + P RTS L G  +V +++ G+   C++ FRM K T
Sbjct: 19  EEGDDLDEIFIAHIMNEYEEIFLCKTPQRTSMLSGAQFVRDMIEGHPQTCYELFRMDKET 78

Query: 75  FIALCEDLKAKTNLKAFRYLTVQEKVAIFLLIISHNERNCIAAEKFQHSGQTISR----- 134
           F+ LC+ LK   NL+  R++TV+E VA+FLLI+ HN R  + A++FQHS +T++R     
Sbjct: 79  FMNLCDHLKRHENLQDTRFVTVEEAVAMFLLIVGHNVRMRVVADRFQHSTETVARHFKEV 138

Query: 135 ------------------------------------DCIGAIDSTHIAACIPLNKQIPFR 194
                                               DCIGAID THI+A +P ++Q  FR
Sbjct: 139 RRALCRLGKILICPNNMTNEVSSYVASNPKYFPWFKDCIGAIDGTHISAWVPADRQTSFR 198

Query: 195 GRKTNTTWNIMCVCSFNMLFTYVMPGWEGSANDSRILLECIKHPDNKFPMPKEG 208
           GRKT  T N+MC C+F+M+FT+V  GWEG+AND+R+ L+ +  P+  FP P EG
Sbjct: 199 GRKTVITQNVMCACNFDMMFTFVYAGWEGTANDARVFLDALTRPEVNFPWPSEG 252

BLAST of Lcy07g004570 vs. ExPASy TrEMBL
Match: A0A438FKK5 (Protein ALP1-like OS=Vitis vinifera OX=29760 GN=VvCHDh000000_17 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.9e-41
Identity = 92/252 (36.51%), Postives = 138/252 (54.76%), Query Frame = 0

Query: 4   IEDNNFENCDF-------DNDDDALYIFFNLLYVGFHKMQSSRQPCRTSSLKGHDYVIEL 63
           ++DNN  + +        +  DD   IF   +   + ++   + P RTS L G  +V ++
Sbjct: 1   MDDNNTSSGELYDSTSSSEEGDDLDEIFIAHIMNEYEEIFLCKTPQRTSMLSGAQFVRDM 60

Query: 64  LNGNDTRCFDCFRMKKGTFIALCEDLKAKTNLKAFRYLTVQEKVAIFLLIISHNERNCIA 123
           + G+   C++ FRM K TF+ LC+ LK   NL+  R++TV+E VA+FLLI+ HN R  + 
Sbjct: 61  IEGHPQTCYELFRMDKETFMNLCDHLKRHENLQDTRFVTVEEAVAMFLLIVGHNVRMRVV 120

Query: 124 AEKFQHSGQTISR-----------------------------------------DCIGAI 183
           A++FQHS +T++R                                         DCIGAI
Sbjct: 121 ADRFQHSTKTVARHFKEVRRALCRLGKILICPNNMTNEVSSYVASNPKYFPWFKDCIGAI 180

Query: 184 DSTHIAACIPLNKQIPFRGRKTNTTWNIMCVCSFNMLFTYVMPGWEGSANDSRILLECIK 208
           D THI+A +P ++Q  FRGRKT  T N+MC C+F+M+FT+V  GWEG+AND+R+ L+ + 
Sbjct: 181 DGTHISAWVPADRQTSFRGRKTVITQNVMCACNFDMMFTFVYAGWEGTANDARVFLDALT 240

BLAST of Lcy07g004570 vs. NCBI nr
Match: KAF7148819.1 (hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii])

HSP 1 Score: 226.1 bits (575), Expect = 2.8e-55
Identity = 109/238 (45.80%), Postives = 143/238 (60.08%), Query Frame = 0

Query: 10  ENCDFDNDDDALYIFFNLLYVGFHKMQSSRQPCRTSSLKGHDYVIELLNGNDTRCFDCFR 69
           ++ D D++D+ + +  +L    ++ M    +PCRTS L+GHDYV+E+LNG++ RC   FR
Sbjct: 624 DHSDDDSEDEEVVVLLSLALYEYYNMYIDHRPCRTSILRGHDYVVEVLNGHEDRCHQNFR 683

Query: 70  MKKGTFIALCEDLKAKTNLKAFRYLTVQEKVAIFLLIISHNERNCIAAEKFQHSGQTIS- 129
           MK   FIA CE LK   NLK  RYLT+QE+V IFLL I HNERN +  E+FQHSG TIS 
Sbjct: 684 MKPQVFIAFCEALKLHANLKHSRYLTLQEQVCIFLLTIGHNERNRVVQERFQHSGHTISI 743

Query: 130 ---------------------------------------RDCIGAIDSTHIAACIPLNKQ 189
                                                  +DC+GAID THI+A +P + Q
Sbjct: 744 YFHRVLKAVCKLGVVIIQPPSFDSIPHQIRRNAKYFPFFKDCVGAIDGTHISASVPASDQ 803

Query: 190 IPFRGRKTNTTWNIMCVCSFNMLFTYVMPGWEGSANDSRILLECIKHPDNKFPMPKEG 208
           IP+RG+ T TT N+M  CSF+M FTYV+ GWEG+ANDSR+ LEC+ +P   FP P EG
Sbjct: 804 IPYRGKHTVTTQNVMAACSFDMRFTYVLSGWEGTANDSRVFLECVNNPVMGFPKPPEG 861

BLAST of Lcy07g004570 vs. NCBI nr
Match: KAF7123090.1 (hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii])

HSP 1 Score: 224.2 bits (570), Expect = 1.1e-54
Identity = 110/246 (44.72%), Postives = 144/246 (58.54%), Query Frame = 0

Query: 2   NLIEDNNFENCDFDNDDDALYIFFNLLYVGFHKMQSSRQPCRTSSLKGHDYVIELLNGND 61
           N    +   + D D++D+ + +  +L    ++ M    +PCRTS L+GHDYV+E+LNG++
Sbjct: 263 NFCNMDPISDSDDDSEDEEVVVLLSLALYEYYDMYIDHRPCRTSMLRGHDYVLEVLNGHE 322

Query: 62  TRCFDCFRMKKGTFIALCEDLKAKTNLKAFRYLTVQEKVAIFLLIISHNERNCIAAEKFQ 121
            RC   FRMK   FIA CE LK   NLK  RYLT+QE+V IFLL I HNERN +  E+FQ
Sbjct: 323 DRCHQNFRMKPQVFIAFCEALKLHANLKHSRYLTLQEQVCIFLLTIGHNERNRVVQERFQ 382

Query: 122 HSGQTIS----------------------------------------RDCIGAIDSTHIA 181
           HSG TIS                                        +DC+GAID THI+
Sbjct: 383 HSGHTISIYFHRVLKAVCKLGVVIIQPPSFDSIPHQIRRNAKYFPFFKDCVGAIDGTHIS 442

Query: 182 ACIPLNKQIPFRGRKTNTTWNIMCVCSFNMLFTYVMPGWEGSANDSRILLECIKHPDNKF 208
           A +P + QIP+RG+ T TT N+M  CSF+M FTYV+ GWEG+ANDSR+ LEC+ +P   F
Sbjct: 443 ASVPASDQIPYRGKHTVTTQNVMAACSFDMRFTYVLSGWEGTANDSRVFLECVNNPAMGF 502

BLAST of Lcy07g004570 vs. NCBI nr
Match: XP_030486358.1 (protein ALP1-like isoform X1 [Cannabis sativa])

HSP 1 Score: 216.9 bits (551), Expect = 1.7e-52
Identity = 103/233 (44.21%), Postives = 145/233 (62.23%), Query Frame = 0

Query: 15  DNDDDALYIFFNLLYVGFHKMQSSRQPCRTSSLKGHDYVIELLNGNDTRCFDCFRMKKGT 74
           D+DD+   +      V ++++  +++PCR S+L GH+YV+E+L+G+D+RC+D FRM K  
Sbjct: 17  DSDDEFGELLILFACVEYNQLYLTKEPCRNSALSGHEYVMEVLHGHDSRCYDLFRMDKDV 76

Query: 75  FIALCEDLKAKTNLKAFRYLTVQEKVAIFLLIISHNERNCIAAEKFQHSGQTIS------ 134
           F   C  LK K  LK  RYL+V+E+VA+FL +I HNER+ + AE+FQHS  T S      
Sbjct: 77  FKLFCGVLKEKKLLKNSRYLSVEEQVAMFLFVIGHNERHRVVAERFQHSTSTTSEYFRKV 136

Query: 135 ----------------------------------RDCIGAIDSTHIAACIPLNKQIPFRG 194
                                             ++C+GAID THI+A +P+N+QIP+RG
Sbjct: 137 LKAVCRLSKELITPPLFDVVPSEIRFNPKYYPFFKNCVGAIDGTHISAHVPINEQIPYRG 196

Query: 195 RKTNTTWNIMCVCSFNMLFTYVMPGWEGSANDSRILLECIKHPDNKFPMPKEG 208
           RK +TT N+MC+CSF+M FTYV+ GWEGSAND+RIL EC  +PD +FP P  G
Sbjct: 197 RKVDTTQNVMCICSFDMKFTYVVAGWEGSANDARILSECATNPDYEFPAPPNG 249

BLAST of Lcy07g004570 vs. NCBI nr
Match: XP_030497764.1 (protein ALP1-like [Cannabis sativa])

HSP 1 Score: 213.4 bits (542), Expect = 1.9e-51
Identity = 102/233 (43.78%), Postives = 145/233 (62.23%), Query Frame = 0

Query: 15  DNDDDALYIFFNLLYVGFHKMQSSRQPCRTSSLKGHDYVIELLNGNDTRCFDCFRMKKGT 74
           D+DD+   +      V ++++  +++PCR S+L GH+YV+E+L+G+++RC+D FRM K  
Sbjct: 17  DSDDEFGELLVLFACVEYNQLYLTKEPCRNSALSGHEYVMEVLHGHESRCYDLFRMDKDV 76

Query: 75  FIALCEDLKAKTNLKAFRYLTVQEKVAIFLLIISHNERNCIAAEKFQHSGQTIS------ 134
           F   C  LK K  LK  RYL+V+E+VA+FL +I HNER+ + AE+FQHS  T S      
Sbjct: 77  FKLFCGVLKEKNLLKNSRYLSVEEQVAMFLYVIGHNERHRVVAERFQHSTSTTSEYFRKV 136

Query: 135 ----------------------------------RDCIGAIDSTHIAACIPLNKQIPFRG 194
                                             ++C+GAID THI+A +P+++QIP+RG
Sbjct: 137 LKAICHLSKELITPPLFDVVPSEIRFNPKYYPFFKNCVGAIDGTHISAHVPIDEQIPYRG 196

Query: 195 RKTNTTWNIMCVCSFNMLFTYVMPGWEGSANDSRILLECIKHPDNKFPMPKEG 208
           RK +TT NIMC+CSF+M FTYV+ GWEGSAND+RIL EC  +PD +FP P  G
Sbjct: 197 RKVDTTQNIMCICSFDMKFTYVVAGWEGSANDARILSECATNPDYEFPAPPHG 249

BLAST of Lcy07g004570 vs. NCBI nr
Match: XP_030481634.1 (protein ALP1-like [Cannabis sativa])

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-51
Identity = 96/216 (44.44%), Postives = 140/216 (64.81%), Query Frame = 0

Query: 32  FHKMQSSRQPCRTSSLKGHDYVIELLNGNDTRCFDCFRMKKGTFIALCEDLKAKTNLKAF 91
           ++++  +++PCR S+L GH+YV+E+L+G+++RC+D FRM K  FI  C  LK K  L+  
Sbjct: 50  YNRLYLTKEPCRNSALSGHEYVMEVLHGHESRCYDLFRMDKDVFILFCGVLKEKNLLRNS 109

Query: 92  RYLTVQEKVAIFLLIISHNERNCIAAEKFQHSGQTIS----------------------- 151
           RYL+V+E+V++FL ++ HNER+ + AE+FQHS  TIS                       
Sbjct: 110 RYLSVEEQVSMFLFVVGHNERHRVVAERFQHSTSTISEYFRKVLRAVCRLSKELITPPSF 169

Query: 152 -----------------RDCIGAIDSTHIAACIPLNKQIPFRGRKTNTTWNIMCVCSFNM 208
                            ++C+GAID THI+A +P+++QIP+RGRK +TT N+MC+CSF+M
Sbjct: 170 DVVPPEIRFNPKYYPFLKNCVGAIDGTHISAHVPIDEQIPYRGRKVDTTQNVMCICSFDM 229

BLAST of Lcy07g004570 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 2.9e-26
Identity = 63/201 (31.34%), Postives = 101/201 (50.25%), Query Frame = 0

Query: 39  RQPCRTSSLKGHDYVIELLNGNDTRCFDCFRMKKGTFIALCEDLKAKTNLKAFRYLTVQE 98
           ++  + S   G+ +V ++LNG + +CF+ FRM K  F  LC+ L+ +  L+    + ++ 
Sbjct: 17  KEVSKISISDGNKFVYQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEA 76

Query: 99  KVAIFLLIISHNERNCIAAEKFQHSGQTISR----------------------------- 158
           ++AIFL II HN R     E F +SG+TISR                             
Sbjct: 77  QLAIFLFIIGHNLRTRAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLEND 136

Query: 159 -----DCIGAIDSTHIAACIPLNKQIPFRGRKTNTTWNIMCVCSFNMLFTYVMPGWEGSA 206
                DC+G +DS HI   + +++Q PFR      T N++   SF++ F YV+ GWEGSA
Sbjct: 137 DPYFKDCVGVVDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSA 196

BLAST of Lcy07g004570 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.9 bits (211), Expect = 4.2e-17
Identity = 34/78 (43.59%), Postives = 53/78 (67.95%), Query Frame = 0

Query: 129 RDCIGAIDSTHIAACIPLNKQIPFRGRKTNTTWNIMCVCSFNMLFTYVMPGWEGSANDSR 188
           +DC+GAID THI A +   K   FR RK + + N++  C+F++ F YV+ GWEGSA+DS+
Sbjct: 23  KDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHDSK 82

Query: 189 ILLECIKHPDNKFPMPKE 207
           +L + +    N+ P+P+E
Sbjct: 83  VLNDALTRNSNRLPVPEE 100

BLAST of Lcy07g004570 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 5.7e-14
Identity = 50/218 (22.94%), Postives = 84/218 (38.53%), Query Frame = 0

Query: 30  VGFHKMQSSRQPCRTSSLKGHDYVIELLNGNDTRCFDCFRMKKGTFIALCEDLKAKTNLK 89
           + ++     R P +     G   +   L  +   C    RM    F  LC  L+   +L+
Sbjct: 32  LNYYDRYFQRAPVQIDRGLGWRNIWRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQ 91

Query: 90  AFRYLTVQEKVAIFLLIISHNERNCIAAEKFQHSGQTISR-------------------- 149
               ++++E VA+FL I  HNE       +F  + +T+ R                    
Sbjct: 92  PTLNISIEESVAMFLRICGHNEVYRDVGLRFGRNQETVQRKFREVLTATELLACDYIRTP 151

Query: 150 -----------------------DCIGAIDSTHIAACIPLNKQIPFRGRKTNTTWNIMCV 205
                                    +GA+D TH+   +  + Q  +  R  N + NIM +
Sbjct: 152 TRQELYRIPERLQVDQRYWPYFSGFVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAI 211

BLAST of Lcy07g004570 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 8.2e-13
Identity = 49/174 (28.16%), Postives = 77/174 (44.25%), Query Frame = 0

Query: 60  NDTRCFDCFRMKKGTFIALCEDLKAKTNLKAFRYLTVQEKVAIFLLIISHNERNCIAAEK 119
           N+  C    RM    F  LCE L  K  L++   +++ E VAIFL+I + N+     A +
Sbjct: 20  NEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDIALR 79

Query: 120 FQHSGQTISR---DCIGAIDSTHIAACIPLN----KQIPFRGRKTNTTW----------- 179
           F H+ +TI R   D + A++   +    P      + I  R +     W           
Sbjct: 80  FGHAQETIWRKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYWPFLMDLLGIAS 139

Query: 180 -NIMCVCSFNMLFTYVMPGWEGSANDSRILLECIKH-------PDNKFPMPKEG 208
            N++ +C  +MLFTY   G  GS +D+R+L   I         PD+K+ +   G
Sbjct: 140 FNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAISDDPLFHVPPDSKYYLVDSG 193

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3E6954.8e-4540.74protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=... [more]
A0A3Q7Y3314.8e-4540.74protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=... [more]
A0A4Y7J6735.3e-4440.77Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_014815 PE=3 SV=1[more]
A0A438CFP06.5e-4238.03Protein ALP1-like OS=Vitis vinifera OX=29760 GN=VvCHDh000000_4 PE=3 SV=1[more]
A0A438FKK51.9e-4136.51Protein ALP1-like OS=Vitis vinifera OX=29760 GN=VvCHDh000000_17 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
KAF7148819.12.8e-5545.80hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii][more]
KAF7123090.11.1e-5444.72hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii][more]
XP_030486358.11.7e-5244.21protein ALP1-like isoform X1 [Cannabis sativa][more]
XP_030497764.11.9e-5143.78protein ALP1-like [Cannabis sativa][more]
XP_030481634.13.2e-5144.44protein ALP1-like [Cannabis sativa][more]
Match NameE-valueIdentityDescription
AT5G41980.12.9e-2631.34CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT5G28950.14.2e-1743.59unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G43722.15.7e-1422.94unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G28730.18.2e-1328.16unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 135..193
e-value: 1.7E-6
score: 27.8
NoneNo IPR availablePANTHERPTHR22930:SF212NUCLEASE HARBI1 ISOFORM X1-RELATEDcoord: 129..195
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 35..129
NoneNo IPR availablePANTHERPTHR22930:SF212NUCLEASE HARBI1 ISOFORM X1-RELATEDcoord: 35..129
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 129..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g004570.1Lcy07g004570.1mRNA