Lcy07g004040 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g004040
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein FAR1-RELATED SEQUENCE 4-like
Location	Chr07: 19285532 .. 19286453 (-)
RNA-Seq Expression	Lcy07g004040
Synteny	Lcy07g004040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTACATCTGATGAGGAACTTGAAGTTGAAATACAAAGACAAGCTTATTGATTCCATATTTTTTCAATGTGCCAAAGCTTACAATGTTGTAGATTTTGAATTTCAGATGCGTCAGTTGGAGCTAGATGCTCGAGGTATAAGTAAGGAGTTGCAAACTATAGGCTTTTCCAAGTGGTCTCGTGCTTATTCTACCCGACGTCGGTATAAGATAATGACCACCAACATATCTGAGTCTTTAAATGCTTGCATGAAGGAAGCAAGAGAGTTACCTATTTCATCTATGTTGGAAGTTTTACGAATGATGCTACAAAGATGGTTCTTTGAAAGACGGAATGAAGCATCTTTCCAAGCAACAGATTTTACTAAATCTACTGAGAAGCATCTAAGAGAAGAAATAAAGAAGGGTCGAACAATGCAGGTTAGGTTGTTTATATACAATTGTATATTATTCACTTTTTATTAATACGCTAATATATACCCTATTATATCAGGTAAACCCAGTTGACAATATGCAATTTCAAGTGATCGATGGAACGAGTCAATATGATGTTCACTTAACAACCAAGAGGTGTAGTTGTCGGATGTGGGACATCTTGGAAATTCCGTGTTCTCATGCATGCGCTGTGTTGACAACTAAGCATGTATCCATCAAGGAGTATACATCAAACTTCTACCTTAGCAAGACTCTATCTTCTATATACAGTGGCTTAATTCATCCATTAGGACATGAGTCTAGCTGGATTATTCTCGAAGAGGTAAAGAACATCAAAATTTTACCACCCAATGTGAAGCGTTCTGTTGGAAGGCCAAAGAAGATCAGGATCCCTTCCCAAATGGAATTCAAGAGGCGTGTGAAATGTGGTCGTTGTGGACGATTTGGGCACAATCGAAAATCTTGCAAATTTTCCCTTACCCAATGA

mRNA sequence

ATGTTACATCTGATGAGGAACTTGAAGTTGAAATACAAAGACAAGCTTATTGATTCCATATTTTTTCAATGTGCCAAAGCTTACAATGTTGTAGATTTTGAATTTCAGATGCGTCAGTTGGAGCTAGATGCTCGAGGTATAAGTAAGGAGTTGCAAACTATAGGCTTTTCCAAGTGGTCTCGTGCTTATTCTACCCGACGTCGGTATAAGATAATGACCACCAACATATCTGAGTCTTTAAATGCTTGCATGAAGGAAGCAAGAGAGTTACCTATTTCATCTATGTTGGAAGTTTTACGAATGATGCTACAAAGATGGTTCTTTGAAAGACGGAATGAAGCATCTTTCCAAGCAACAGATTTTACTAAATCTACTGAGAAGCATCTAAGAGAAGAAATAAAGAAGGGTCGAACAATGCAGGTAAACCCAGTTGACAATATGCAATTTCAAGTGATCGATGGAACGAGTCAATATGATGTTCACTTAACAACCAAGAGGTGTAGTTGTCGGATGTGGGACATCTTGGAAATTCCGTGTTCTCATGCATGCGCTGTGTTGACAACTAAGCATGTATCCATCAAGGAGTATACATCAAACTTCTACCTTAGCAAGACTCTATCTTCTATATACAGTGGCTTAATTCATCCATTAGGACATGAGTCTAGCTGGATTATTCTCGAAGAGGTAAAGAACATCAAAATTTTACCACCCAATGTGAAGCGTTCTGTTGGAAGGCCAAAGAAGATCAGGATCCCTTCCCAAATGGAATTCAAGAGGCGTGTGAAATGTGGTCGTTGTGGACGATTTGGGCACAATCGAAAATCTTGCAAATTTTCCCTTACCCAATGA

Coding sequence (CDS)

ATGTTACATCTGATGAGGAACTTGAAGTTGAAATACAAAGACAAGCTTATTGATTCCATATTTTTTCAATGTGCCAAAGCTTACAATGTTGTAGATTTTGAATTTCAGATGCGTCAGTTGGAGCTAGATGCTCGAGGTATAAGTAAGGAGTTGCAAACTATAGGCTTTTCCAAGTGGTCTCGTGCTTATTCTACCCGACGTCGGTATAAGATAATGACCACCAACATATCTGAGTCTTTAAATGCTTGCATGAAGGAAGCAAGAGAGTTACCTATTTCATCTATGTTGGAAGTTTTACGAATGATGCTACAAAGATGGTTCTTTGAAAGACGGAATGAAGCATCTTTCCAAGCAACAGATTTTACTAAATCTACTGAGAAGCATCTAAGAGAAGAAATAAAGAAGGGTCGAACAATGCAGGTAAACCCAGTTGACAATATGCAATTTCAAGTGATCGATGGAACGAGTCAATATGATGTTCACTTAACAACCAAGAGGTGTAGTTGTCGGATGTGGGACATCTTGGAAATTCCGTGTTCTCATGCATGCGCTGTGTTGACAACTAAGCATGTATCCATCAAGGAGTATACATCAAACTTCTACCTTAGCAAGACTCTATCTTCTATATACAGTGGCTTAATTCATCCATTAGGACATGAGTCTAGCTGGATTATTCTCGAAGAGGTAAAGAACATCAAAATTTTACCACCCAATGTGAAGCGTTCTGTTGGAAGGCCAAAGAAGATCAGGATCCCTTCCCAAATGGAATTCAAGAGGCGTGTGAAATGTGGTCGTTGTGGACGATTTGGGCACAATCGAAAATCTTGCAAATTTTCCCTTACCCAATGA

Protein sequence

MLHLMRNLKLKYKDKLIDSIFFQCAKAYNVVDFEFQMRQLELDARGISKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEARELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKSTEKHLREEIKKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIILEEVKNIKILPPNVKRSVGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCKFSLTQ

Homology

[Close]

BLAST of Lcy07g004040 vs. ExPASy TrEMBL
Match: A0A6J1C328 (uncharacterized protein LOC111006994 OS=Momordica charantia OX=3673 GN=LOC111006994 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 9.4e-68
Identity = 145/249 (58.23%), Postives = 169/249 (67.87%), Query Frame = 0


Query: 3   HLMRNLKLKYKDKLIDSIFFQCAKAYNVVDFEFQMRQLELDARGISKELQTIGFSKWSRA 62
           HL +NLKLKYKDK+ D++FF CAKAYNV DFE  MR L+   RGI +EL  IGFSKWS A
Sbjct: 399 HLFKNLKLKYKDKVSDNLFFPCAKAYNVEDFEDNMRLLDSTVRGIREELSVIGFSKWSCA 458

Query: 63  YSTRRRYKIMTTNISESLNACMKEARELPISSMLEVLRMMLQRWFFERRNEASFQATDFT 122
           +S+  RY  MTTNISESLNA MK+ARELPI+SMLEV+RMMLQRWF+ER+N A FQ T+FT
Sbjct: 459 FSSSSRYNFMTTNISESLNAAMKDARELPITSMLEVVRMMLQRWFYERKNHADFQITEFT 518

Query: 123 KSTEKHLREEIKKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHA 182
           KS EK LRE+I  GRTM V  V+N  +QVID   Q + HL T                  
Sbjct: 519 KSVEKKLREQISDGRTMHVYAVNNDIYQVIDNHRQVEKHLPT------------------ 578

Query: 183 CAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIILEEVKNIKILPPNVKRS 242
                      K Y S +Y +  L S YSG IHPLGH+SSW I E+VK IK+LPPNVKR 
Sbjct: 579 -----------KGYVSLYYSNNYLRSTYSGSIHPLGHQSSWNIPEDVKIIKMLPPNVKRP 618

Query: 243 VGRPKKIRI 252
            GRPKK+RI
Sbjct: 639 AGRPKKLRI 618

[Close]

BLAST of Lcy07g004040 vs. ExPASy TrEMBL
Match: A0A6J1DNQ8 (uncharacterized protein LOC111022347 OS=Momordica charantia OX=3673 GN=LOC111022347 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 9.4e-60
Identity = 131/235 (55.74%), Postives = 155/235 (65.96%), Query Frame = 0


Query: 48  SKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEARELPISSMLEVLRMMLQRWF 107
           S+EL  IGFSKWS AYS   RY  MTTNIS+SLNA MK+A ELPI+SMLEV+RMMLQRWF
Sbjct: 380 SEELSGIGFSKWSYAYSPSSRYNFMTTNISKSLNAAMKDAMELPITSMLEVVRMMLQRWF 439

Query: 108 FERRNEASFQATDFTKSTEKHLREEIKKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRC 167
           ++R+N+  FQ T FTKS E  L E+I   RTM+V  V+N  +Q                 
Sbjct: 440 YKRQNDVDFQITKFTKSAESKLSEQISACRTMKVYAVNNDIYQ----------------- 499

Query: 168 SCRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIILE 227
                                KH+  K Y S++Y +  LSS YSG IHPLGH+SSW I E
Sbjct: 500 ---------------------KHLPKKGYVSSYYSNNYLSSTYSGSIHPLGHQSSWNIPE 559

Query: 228 EVKNIKILPPNVKRSVGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCKFSLTQ 283
           +VK IK+L PNVKR  GRPKK+RIPS +EFK+RVKC RCGR+GHNRKSCKFSLTQ
Sbjct: 560 DVKIIKMLLPNVKRPAGRPKKLRIPSALEFKKRVKCSRCGRYGHNRKSCKFSLTQ 576

[Close]

BLAST of Lcy07g004040 vs. ExPASy TrEMBL
Match: A0A5A7T2S1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00270 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.2e-59
Identity = 119/275 (43.27%), Postives = 177/275 (64.36%), Query Frame = 0


Query: 3   HLMRNLKLKYKDKLIDSIFFQCAKAYNVVDFEFQMRQLELDARGISKELQTIGFSKWSRA 62
           HL++NLK  +K   ++  F +CA+AY  ++FE+ MRQLE  +  +  EL+ +G  KW+RA
Sbjct: 143 HLLKNLKKNHKSLPMEDSFNKCARAYTPLEFEYYMRQLEQLSPSMRHELEAVGRHKWARA 202

Query: 63  YSTRRRYKIMTTNISESLNACMKEARELPISSMLEVLRMMLQRWFFERRNEASFQATDFT 122
           +  R+RY+++TTNISES+N+ +KE RELPI  +LE +R ++Q+WF+E R + SFQ T  +
Sbjct: 203 FFRRKRYQVITTNISESMNSTLKEQRELPIIGLLESIRSLIQKWFYECRTKWSFQRTQLS 262

Query: 123 KSTEKHLREEIKKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHA 182
            S E  +RE + + R+M + PVD  +F+V     Q+ V++  + CSCR WD+  IPCSHA
Sbjct: 263 ISAEDMIRESLAQSRSMNIYPVDQHEFEVHHRKEQFVVNILNRTCSCRQWDLDLIPCSHA 322

Query: 183 CAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIILEEVKNIKILPPNVKRS 242
           C  L+T+++++  YT  FY    L ++Y     P+G  +      +  N  ILPP VKR 
Sbjct: 323 CIALSTRNLNLHLYTDKFYYVSNLINLYKKGTRPIGTVNQIRNTHQGGNDGILPPQVKRP 382

Query: 243 VGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK 278
            GRPKK R  S +E K  V+C RCG+ GHN +SCK
Sbjct: 383 AGRPKKKRFTSFLEKKASVRCSRCGKKGHNCRSCK 417

[Close]

BLAST of Lcy07g004040 vs. ExPASy TrEMBL
Match: A0A1S3B5C9 (uncharacterized protein LOC103486212 OS=Cucumis melo OX=3656 GN=LOC103486212 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.2e-59
Identity = 119/275 (43.27%), Postives = 177/275 (64.36%), Query Frame = 0


Query: 3   HLMRNLKLKYKDKLIDSIFFQCAKAYNVVDFEFQMRQLELDARGISKELQTIGFSKWSRA 62
           HL++NLK  +K   ++  F +CA+AY  ++FE+ MRQLE  +  +  EL+ +G  KW+RA
Sbjct: 30  HLLKNLKKNHKSLPMEDSFNKCARAYTPLEFEYYMRQLEQLSPSMRHELEAVGRHKWARA 89

Query: 63  YSTRRRYKIMTTNISESLNACMKEARELPISSMLEVLRMMLQRWFFERRNEASFQATDFT 122
           +  R+RY+++TTNISES+N+ +KE RELPI  +LE +R ++Q+WF+E R + SFQ T  +
Sbjct: 90  FFRRKRYQVITTNISESMNSTLKEQRELPIIGLLESIRSLIQKWFYECRTKWSFQRTQLS 149

Query: 123 KSTEKHLREEIKKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHA 182
            S E  +RE + + R+M + PVD  +F+V     Q+ V++  + CSCR WD+  IPCSHA
Sbjct: 150 ISAEDMIRESLAQSRSMNIYPVDQHEFEVHHRKEQFVVNILNRTCSCRQWDLDLIPCSHA 209

Query: 183 CAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIILEEVKNIKILPPNVKRS 242
           C  L+T+++++  YT  FY    L ++Y     P+G  +      +  N  ILPP VKR 
Sbjct: 210 CIALSTRNLNLHLYTDKFYYVSNLINLYKKGTRPIGTVNQIRNTHQGGNDGILPPQVKRP 269

Query: 243 VGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK 278
            GRPKK R  S +E K  V+C RCG+ GHN +SCK
Sbjct: 270 AGRPKKKRFTSFLEKKASVRCSRCGKKGHNCRSCK 304

[Close]

BLAST of Lcy07g004040 vs. ExPASy TrEMBL
Match: A0A1S4DWH2 (uncharacterized protein LOC107990862 OS=Cucumis melo OX=3656 GN=LOC107990862 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 3.6e-59
Identity = 120/276 (43.48%), Postives = 176/276 (63.77%), Query Frame = 0


Query: 3   HLMRNLKLKYKDKLIDSIFFQCAKAYNVVDFEFQMRQLELDARGISKELQTIGFSKWSRA 62
           HL++++KL +KD LI+ +F QCA +Y + DFE  MR +E     I   L  +GF +WSRA
Sbjct: 106 HLLKSVKLSFKDSLIEKLFRQCAYSYTIDDFELYMRSMESIYPSIRGYLMKVGFERWSRA 165

Query: 63  YSTRRRYKIMTTNISESLNACMKEARELPISSMLEVLRMMLQRWFFERRNEASFQATDFT 122
           YS +RRY+IMTTNI ESLN+ +K  R+LP++S+LE +R  LQRWF+ERR  AS   +  +
Sbjct: 166 YSRKRRYQIMTTNICESLNSKLKIDRDLPVASLLEAIREFLQRWFYERRKAASCLKSVLS 225

Query: 123 KSTEKHLREEIKKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHA 182
             +E  +R+ + + R+  VNPV  ++FQV+DG   + V L    CSC  WD+ EIP +HA
Sbjct: 226 SWSEGLIRKLVDESRSFIVNPVSEVEFQVVDGGKNFLVKLNCNSCSCLFWDLEEIPWAHA 285

Query: 183 CAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIILEEVKNIKILPPNVKRS 242
             V+ + +++   + S +Y +  LS+ Y GL+ P+G+ + W ++E   N  ILPP  +R 
Sbjct: 286 LIVICSLNLNPYAFVSQYYYATVLSATYGGLVRPIGNHTDWSVVE--MNDNILPPVFRRP 345

Query: 243 VGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCKF 279
             RP+K RIPS  E  +  KC RC R GHN ++C F
Sbjct: 346 AERPRKRRIPSIGEVSKSSKCSRCKRAGHNIRTCTF 379

[Close]

BLAST of Lcy07g004040 vs. NCBI nr
Match: XP_022134813.1 (uncharacterized protein LOC111006994 [Momordica charantia])

HSP 1 Score: 266.9 bits (681), Expect = 1.9e-67
Identity = 145/249 (58.23%), Postives = 169/249 (67.87%), Query Frame = 0


Query: 3   HLMRNLKLKYKDKLIDSIFFQCAKAYNVVDFEFQMRQLELDARGISKELQTIGFSKWSRA 62
           HL +NLKLKYKDK+ D++FF CAKAYNV DFE  MR L+   RGI +EL  IGFSKWS A
Sbjct: 399 HLFKNLKLKYKDKVSDNLFFPCAKAYNVEDFEDNMRLLDSTVRGIREELSVIGFSKWSCA 458

Query: 63  YSTRRRYKIMTTNISESLNACMKEARELPISSMLEVLRMMLQRWFFERRNEASFQATDFT 122
           +S+  RY  MTTNISESLNA MK+ARELPI+SMLEV+RMMLQRWF+ER+N A FQ T+FT
Sbjct: 459 FSSSSRYNFMTTNISESLNAAMKDARELPITSMLEVVRMMLQRWFYERKNHADFQITEFT 518

Query: 123 KSTEKHLREEIKKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHA 182
           KS EK LRE+I  GRTM V  V+N  +QVID   Q + HL T                  
Sbjct: 519 KSVEKKLREQISDGRTMHVYAVNNDIYQVIDNHRQVEKHLPT------------------ 578

Query: 183 CAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIILEEVKNIKILPPNVKRS 242
                      K Y S +Y +  L S YSG IHPLGH+SSW I E+VK IK+LPPNVKR 
Sbjct: 579 -----------KGYVSLYYSNNYLRSTYSGSIHPLGHQSSWNIPEDVKIIKMLPPNVKRP 618

Query: 243 VGRPKKIRI 252
            GRPKK+RI
Sbjct: 639 AGRPKKLRI 618

[Close]

BLAST of Lcy07g004040 vs. NCBI nr
Match: XP_038880504.1 (uncharacterized protein LOC120072166 [Benincasa hispida])

HSP 1 Score: 246.9 bits (629), Expect = 2.1e-61
Identity = 122/271 (45.02%), Postives = 176/271 (64.94%), Query Frame = 0


Query: 8   LKLKYKDKLIDSIFFQCAKAYNVVDFEFQMRQLELDARGISKELQTIGFSKWSRAYSTRR 67
           +KL YKD LID I++ CAKAY +  FEF M+ +E     I + L  +GF KW+ A+S RR
Sbjct: 1   MKLIYKDSLIDDIYYSCAKAYTIDKFEFYMKWMESIYPTIREYLNKVGFEKWAHAHSRRR 60

Query: 68  RYKIMTTNISESLNACMKEARELPISSMLEVLRMMLQRWFFERRNEASFQATDFTKSTEK 127
            Y +MTTNISE LN  +KE RE P++S+L+ +R +LQ WF+E+           T   E 
Sbjct: 61  MYNLMTTNISECLNNILKEPREFPVASLLDYIREILQNWFYEKGQSTLSMKIVLTSWAEF 120

Query: 128 HLREEIKKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACAVLT 187
            LRE+  + R+ +V+P++N +++VIDG + + V+L  K CSCR+WD++EIPC+HACAV+ 
Sbjct: 121 ELREQHNQSRSFKVDPINNEEYKVIDGDNHFLVNLAYKSCSCRVWDLVEIPCAHACAVIC 180

Query: 188 TKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIILEEVKNIKILPPNVKRSVGRPK 247
             ++ I  +  ++Y   TL S Y G ++P+G+ S W  ++    + +LPP VKR VGRP+
Sbjct: 181 GLNLDIYTFVLDYYFCSTLLSTYKGSVYPIGNHSDWRSID--VGVNVLPPIVKRPVGRPR 240

Query: 248 KIRIPSQMEFKRRVKCGRCGRFGHNRKSCKF 279
           K RI S  E KR  KC RC R GHN ++CKF
Sbjct: 241 KQRILSIGEKKRSSKCSRCHRRGHNCRTCKF 269

[Close]

BLAST of Lcy07g004040 vs. NCBI nr
Match: XP_038907134.1 (uncharacterized protein LOC120092945 [Benincasa hispida])

HSP 1 Score: 241.5 bits (615), Expect = 8.7e-60
Identity = 118/261 (45.21%), Postives = 175/261 (67.05%), Query Frame = 0


Query: 3   HLMRNLKLKYKDKLIDSIFFQCAKAYNVVDFEFQMRQLELDARGISKELQTIGFSKWSRA 62
           HL++N+K  YKD LID IF+ CA+AY + +FE  M+ +E     I + L  +GF KW+RA
Sbjct: 430 HLLQNMKTTYKDSLIDKIFYSCAEAYTIDNFELNMKWMESIYPSIREYLSEVGFEKWARA 489

Query: 63  YSTRRRYKIMTTNISESLNACMKEARELPISSMLEVLRMMLQRWFFERRNEASFQATDFT 122
           YS R+RY++MTTNISESL++ ++E+RE PI+S+L+ +R +LQ WF+ER   AS   T  T
Sbjct: 490 YSRRKRYRMMTTNISESLSSVLEESREFPIASLLDSIRQLLQDWFYERSKLASSMKTVLT 549

Query: 123 KSTEKHLREEIKKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHA 182
              E  LR++  + R  +V+ ++N +++V+DG + Y V++ +K CSC  WD+ EIPC+HA
Sbjct: 550 SWAENELRDQHNQSRNFKVDSINNEEYKVVDGDNHYVVNVISKSCSCCFWDLEEIPCAHA 609

Query: 183 CAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIILEEVKNIKILPPNVKRS 242
           CAVL+  ++    + S++Y S T SS Y   IHP+G+ S W  ++   N  +LPP VKR 
Sbjct: 610 CAVLSELNLDSYAFVSDYYFSNTFSSTYKRSIHPIGNHSDWSSVDVDGN--VLPPIVKRQ 669

Query: 243 VGRPKKIRIPSQMEFKRRVKC 264
           VGRP+K RI S  E +  +KC
Sbjct: 670 VGRPRKQRILSMGEERSHMKC 688

[Close]

BLAST of Lcy07g004040 vs. NCBI nr
Match: XP_022155207.1 (uncharacterized protein LOC111022347 [Momordica charantia])

HSP 1 Score: 240.4 bits (612), Expect = 1.9e-59
Identity = 131/235 (55.74%), Postives = 155/235 (65.96%), Query Frame = 0


Query: 48  SKELQTIGFSKWSRAYSTRRRYKIMTTNISESLNACMKEARELPISSMLEVLRMMLQRWF 107
           S+EL  IGFSKWS AYS   RY  MTTNIS+SLNA MK+A ELPI+SMLEV+RMMLQRWF
Sbjct: 380 SEELSGIGFSKWSYAYSPSSRYNFMTTNISKSLNAAMKDAMELPITSMLEVVRMMLQRWF 439

Query: 108 FERRNEASFQATDFTKSTEKHLREEIKKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRC 167
           ++R+N+  FQ T FTKS E  L E+I   RTM+V  V+N  +Q                 
Sbjct: 440 YKRQNDVDFQITKFTKSAESKLSEQISACRTMKVYAVNNDIYQ----------------- 499

Query: 168 SCRMWDILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIILE 227
                                KH+  K Y S++Y +  LSS YSG IHPLGH+SSW I E
Sbjct: 500 ---------------------KHLPKKGYVSSYYSNNYLSSTYSGSIHPLGHQSSWNIPE 559

Query: 228 EVKNIKILPPNVKRSVGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCKFSLTQ 283
           +VK IK+L PNVKR  GRPKK+RIPS +EFK+RVKC RCGR+GHNRKSCKFSLTQ
Sbjct: 560 DVKIIKMLLPNVKRPAGRPKKLRIPSALEFKKRVKCSRCGRYGHNRKSCKFSLTQ 576

[Close]

BLAST of Lcy07g004040 vs. NCBI nr
Match: XP_008442298.1 (PREDICTED: uncharacterized protein LOC103486212 [Cucumis melo])

HSP 1 Score: 240.0 bits (611), Expect = 2.5e-59
Identity = 119/275 (43.27%), Postives = 177/275 (64.36%), Query Frame = 0


Query: 3   HLMRNLKLKYKDKLIDSIFFQCAKAYNVVDFEFQMRQLELDARGISKELQTIGFSKWSRA 62
           HL++NLK  +K   ++  F +CA+AY  ++FE+ MRQLE  +  +  EL+ +G  KW+RA
Sbjct: 30  HLLKNLKKNHKSLPMEDSFNKCARAYTPLEFEYYMRQLEQLSPSMRHELEAVGRHKWARA 89

Query: 63  YSTRRRYKIMTTNISESLNACMKEARELPISSMLEVLRMMLQRWFFERRNEASFQATDFT 122
           +  R+RY+++TTNISES+N+ +KE RELPI  +LE +R ++Q+WF+E R + SFQ T  +
Sbjct: 90  FFRRKRYQVITTNISESMNSTLKEQRELPIIGLLESIRSLIQKWFYECRTKWSFQRTQLS 149

Query: 123 KSTEKHLREEIKKGRTMQVNPVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHA 182
            S E  +RE + + R+M + PVD  +F+V     Q+ V++  + CSCR WD+  IPCSHA
Sbjct: 150 ISAEDMIRESLAQSRSMNIYPVDQHEFEVHHRKEQFVVNILNRTCSCRQWDLDLIPCSHA 209

Query: 183 CAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIILEEVKNIKILPPNVKRS 242
           C  L+T+++++  YT  FY    L ++Y     P+G  +      +  N  ILPP VKR 
Sbjct: 210 CIALSTRNLNLHLYTDKFYYVSNLINLYKKGTRPIGTVNQIRNTHQGGNDGILPPQVKRP 269

Query: 243 VGRPKKIRIPSQMEFKRRVKCGRCGRFGHNRKSCK 278
            GRPKK R  S +E K  V+C RCG+ GHN +SCK
Sbjct: 270 AGRPKKKRFTSFLEKKASVRCSRCGKKGHNCRSCK 304

[Close]

BLAST of Lcy07g004040 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 43.5 bits (101), Expect = 3.3e-04
Identity = 48/250 (19.20%), Postives = 98/250 (39.20%), Query Frame = 0


Query: 3   HLMRNLKLKYKDKLIDSIFFQCAKAYNVVDFEFQMRQLELDARGISKELQTIGFSKWSRA 62
           HL       ++D  ++S+  Q        +F+  M  ++       K L  I   KW+ A
Sbjct: 473 HLRSQFLGVFRDYNLESLVEQAGSTNQKEEFDSYMNDIKEKNPEAWKWLDQIPRHKWALA 532

Query: 63  YSTRRRYKIMTTNISESLNACMKEARELPISSMLEVLRMMLQ----RWFFERRNEASFQA 122
           + +  RY I+  +       C    R  P  ++     +ML     R  F++   + + +
Sbjct: 533 HDSGLRYGIIEIDREALFAVC----RGFPYCTVAMTGGVMLMFDELRSSFDKSLSSIYSS 592

Query: 123 TD----FTKSTEKHLREEIKKGRTMQVNPVDNMQFQVIDGT--SQYDVHLTTKRCSCRMW 182
            +    +T+     L E +       +  ++   F+V + +   ++ V L    C+CR +
Sbjct: 593 LNRGVVYTEPFMDKLEEFMTDSIPYVITQLERDSFKVSESSEKEEWIVQLNVSTCTCRKF 652

Query: 183 DILEIPCSHACAVLTTKHVSIKEYTSNFYLSKTLSSIYSGLIHPLGHESSWIILEEVKNI 242
              + PC HA AV     ++  +Y    Y  +     Y+    P+   ++W   E+ +  
Sbjct: 653 QSYKFPCLHALAVFEKLKINPLQYVDECYTVEQYCKTYAATFSPVPDVAAW--PEDCRVP 712

The following BLAST results are available for this feature:

BLAST of Lcy07g004040 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy07g004040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C328	9.4e-68	58.23	uncharacterized protein LOC111006994 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1DNQ8	9.4e-60	55.74	uncharacterized protein LOC111022347 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A5A7T2S1	1.2e-59	43.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3B5C9	1.2e-59	43.27	uncharacterized protein LOC103486212 OS=Cucumis melo OX=3656 GN=LOC103486212 PE=...	[more]
A0A1S4DWH2	3.6e-59	43.48	uncharacterized protein LOC107990862 OS=Cucumis melo OX=3656 GN=LOC107990862 PE=...	[more]

BLAST of Lcy07g004040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134813.1	1.9e-67	58.23	uncharacterized protein LOC111006994 [Momordica charantia]	[more]
XP_038880504.1	2.1e-61	45.02	uncharacterized protein LOC120072166 [Benincasa hispida]	[more]
XP_038907134.1	8.7e-60	45.21	uncharacterized protein LOC120092945 [Benincasa hispida]	[more]
XP_022155207.1	1.9e-59	55.74	uncharacterized protein LOC111022347 [Momordica charantia]	[more]
XP_008442298.1	2.5e-59	43.27	PREDICTED: uncharacterized protein LOC103486212 [Cucumis melo]	[more]

BLAST of Lcy07g004040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64260.1	3.3e-04	19.20	MuDR family transposase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006564	Zinc finger, PMZ-type	SMART	SM00575	26again6	coord: 165..192 e-value: 1.1E-6 score: 38.2
IPR007527	Zinc finger, SWIM-type	PFAM	PF04434	SWIM	coord: 160..188 e-value: 1.1E-8 score: 34.5
IPR007527	Zinc finger, SWIM-type	PROSITE	PS50966	ZF_SWIM	coord: 158..190 score: 10.385475
None	No IPR available	PANTHER	PTHR31973:SF141	FAMILY TRANSPOSASE, PUTATIVE ISOFORM 1-RELATED	coord: 55..276
None	No IPR available	PANTHER	PTHR31973	POLYPROTEIN, PUTATIVE-RELATED	coord: 55..276
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 262..277 score: 8.696716

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g004040.1	Lcy07g004040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding