Lcy07g003260 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAAAGTGTGAAACATTTGATGGGTTTAGTTTGGATTTTGGCATTTGTGGTGGTTGAATCATGCTTGGGTGCTCCGCTTGAGCAATGGAGAGTGCAGGTAATGAACGACATGAAAAGTGAGCAAACTCTATTTCTTCACTGCAAGTCCGCAGACGACGATTTGGGAGTGCAAAATTTGAGATTTGGACAGAAATTTTCATGGACATTTAGAGAGAATATATGGCACAGCACATTGTTTTGGTGCTACATGCGAAATCGTCATAGTCATGCTGCTTTCAACGTATTTTGGGCAAAGAGGTCTTACTCGTCTGGTCCTTTTTATCCATGTGCTTCCGACCAAACTTGTGTTTGGCTGATTCGAGATGATGGAATCTATTTCAACAATGTTTCTACAAATATACTTCAGAAACGTGCTGCTTGGAGCCCAGGCTGGTAG ATGGCGAAAAGTGTGAAACATTTGATGGGTTTAGTTTGGATTTTGGCATTTGTGGTGGTTGAATCATGCTTGGGTGCTCCGCTTGAGCAATGGAGAGTGCAGGTAATGAACGACATGAAAAGTGAGCAAACTCTATTTCTTCACTGCAAGTCCGCAGACGACGATTTGGGAGTGCAAAATTTGAGATTTGGACAGAAATTTTCATGGACATTTAGAGAGAATATATGGCACAGCACATTGTTTTGGTGCTACATGCGAAATCGTCATAGTCATGCTGCTTTCAACGTATTTTGGGCAAAGAGGTCTTACTCGTCTGGTCCTTTTTATCCATGTGCTTCCGACCAAACTTGTGTTTGGCTGATTCGAGATGATGGAATCTATTTCAACAATGTTTCTACAAATATACTTCAGAAACGTGCTGCTTGGAGCCCAGGCTGGTAG ATGGCGAAAAGTGTGAAACATTTGATGGGTTTAGTTTGGATTTTGGCATTTGTGGTGGTTGAATCATGCTTGGGTGCTCCGCTTGAGCAATGGAGAGTGCAGGTAATGAACGACATGAAAAGTGAGCAAACTCTATTTCTTCACTGCAAGTCCGCAGACGACGATTTGGGAGTGCAAAATTTGAGATTTGGACAGAAATTTTCATGGACATTTAGAGAGAATATATGGCACAGCACATTGTTTTGGTGCTACATGCGAAATCGTCATAGTCATGCTGCTTTCAACGTATTTTGGGCAAAGAGGTCTTACTCGTCTGGTCCTTTTTATCCATGTGCTTCCGACCAAACTTGTGTTTGGCTGATTCGAGATGATGGAATCTATTTCAACAATGTTTCTACAAATATACTTCAGAAACGTGCTGCTTGGAGCCCAGGCTGGTAG MAKSVKHLMGLVWILAFVVVESCLGAPLEQWRVQVMNDMKSEQTLFLHCKSADDDLGVQNLRFGQKFSWTFRENIWHSTLFWCYMRNRHSHAAFNVFWAKRSYSSGPFYPCASDQTCVWLIRDDGIYFNNVSTNILQKRAAWSPGW Homology
BLAST of Lcy07g003260 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 7.8e-23 Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 0
BLAST of Lcy07g003260 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.9e-21 Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = 0
BLAST of Lcy07g003260 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10 Identity = 37/97 (38.14%), Postives = 51/97 (52.58%), Query Frame = 0
BLAST of Lcy07g003260 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.4e-10 Identity = 35/99 (35.35%), Postives = 57/99 (57.58%), Query Frame = 0
BLAST of Lcy07g003260 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 7.6e-10 Identity = 38/130 (29.23%), Postives = 70/130 (53.85%), Query Frame = 0
BLAST of Lcy07g003260 vs. ExPASy TrEMBL
Match: A0A6J1ESI0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111437333 PE=3 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 1.0e-25 Identity = 59/131 (45.04%), Postives = 79/131 (60.31%), Query Frame = 0
BLAST of Lcy07g003260 vs. ExPASy TrEMBL
Match: A0A5N6QH19 (S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002535 PE=3 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 3.0e-25 Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = 0
BLAST of Lcy07g003260 vs. ExPASy TrEMBL
Match: A0A5E4EKH7 (S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B010815 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 5.1e-25 Identity = 55/124 (44.35%), Postives = 77/124 (62.10%), Query Frame = 0
BLAST of Lcy07g003260 vs. ExPASy TrEMBL
Match: A0A6P5XJA0 (S-protein homolog OS=Durio zibethinus OX=66656 GN=LOC111283575 PE=3 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 6.7e-25 Identity = 53/115 (46.09%), Postives = 69/115 (60.00%), Query Frame = 0
BLAST of Lcy07g003260 vs. ExPASy TrEMBL
Match: A0A251N105 (S-protein homolog OS=Prunus persica OX=3760 GN=PRUPE_8G208400 PE=3 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 1.1e-24 Identity = 55/124 (44.35%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of Lcy07g003260 vs. NCBI nr
Match: KAE8650840.1 (hypothetical protein Csa_017632 [Cucumis sativus]) HSP 1 Score: 143.3 bits (360), Expect = 1.7e-30 Identity = 67/149 (44.97%), Postives = 90/149 (60.40%), Query Frame = 0
BLAST of Lcy07g003260 vs. NCBI nr
Match: KAE8651473.1 (hypothetical protein Csa_001696 [Cucumis sativus]) HSP 1 Score: 141.0 bits (354), Expect = 8.3e-30 Identity = 65/135 (48.15%), Postives = 89/135 (65.93%), Query Frame = 0
BLAST of Lcy07g003260 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 131.7 bits (330), Expect = 5.0e-27 Identity = 63/148 (42.57%), Postives = 90/148 (60.81%), Query Frame = 0
BLAST of Lcy07g003260 vs. NCBI nr
Match: KGN60342.2 (hypothetical protein Csa_002569, partial [Cucumis sativus]) HSP 1 Score: 131.7 bits (330), Expect = 5.0e-27 Identity = 63/148 (42.57%), Postives = 90/148 (60.81%), Query Frame = 0
BLAST of Lcy07g003260 vs. NCBI nr
Match: KAE8651384.1 (hypothetical protein Csa_001671 [Cucumis sativus]) HSP 1 Score: 130.2 bits (326), Expect = 1.5e-26 Identity = 56/119 (47.06%), Postives = 77/119 (64.71%), Query Frame = 0
BLAST of Lcy07g003260 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 108.2 bits (269), Expect = 5.6e-24 Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 0
BLAST of Lcy07g003260 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 103.6 bits (257), Expect = 1.4e-22 Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = 0
BLAST of Lcy07g003260 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 73.2 bits (178), Expect = 2.0e-13 Identity = 38/123 (30.89%), Postives = 64/123 (52.03%), Query Frame = 0
BLAST of Lcy07g003260 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 66.2 bits (160), Expect = 2.4e-11 Identity = 35/119 (29.41%), Postives = 58/119 (48.74%), Query Frame = 0
BLAST of Lcy07g003260 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 66.2 bits (160), Expect = 2.4e-11 Identity = 35/99 (35.35%), Postives = 57/99 (57.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|