Lcy06g020960 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTATGCTCGTTGTGCTTGGAGGTACCTGAAACATCAGACCACACACTTTTTCAGTGTCATAGAGCAAAGGAAGTGTGGACAAGGTTGGATGTGGGAGGTCAAATTGGATGGGAAAGAGACATGGACATTAAAGATAAATGGATCCATTTAGCTGACTCTGTTCCGGATACAGTTTTAGAGCGAATTTGTGTGGGGTGTTGGGCTATTTGGAATGATCGTAATAACACCATTCATAATCATCCTGTTCCTCCTGTTAATGTTCGTTGTGAATGGATTGATGATTATTTGTATGATTTTAAGACGACAAATCAGCGTATTGGTCGGAAGGCCCAGTCGATCCAAGATATTAACAGGTTGATTTCTCAAGGAAAAAAATACATAATGCATGTGGATGCAGCATGGGACGTGGTGAATAAGAAAAGTGCTATTGGTGTGGTGCTTCGTGACCATAAGGGCCAGTTAAAGCTAGCAATGCATAAGGGAGTTCCTATTTTTTCGTCACCTTTGTGTGCTGAGGTTGTCGTAGTGTTTGAGGGCCTTAAGCTTGCGCGTCGGAATGATGTCAAAAGTTTGTCGCTTTCTCCACGTTTGTGGTCGTCGAACTTTCCTGGTTGGATTGTTCAACAAGCTCAATATGAGCTTCAGTATTTTGTATCCCCTAGGGGAAGTATTTTGAGTTAA ATGGGGTATGCTCGTTGTGCTTGGAGAGCAAAGGAAGTGTGGACAAGGTTGGATGTGGGAGGTCAAATTGGATGGGAAAGAGACATGGACATTAAAGATAAATGGATCCATTTAGCTGACTCTGTTCCGGATACAGTTTTAGAGCGAATTTGTGTGGGGTGTTGGGCTATTTGGAATGATCGTAATAACACCATTCATAATCATCCTGTTCCTCCTGTTAATGTTCGTTGTGAATGGATTGATGATTATTTGTATGATTTTAAGACGACAAATCAGCGTATTGGTCGGAAGGCCCAGTCGATCCAAGATATTAACAGGTTGATTTCTCAAGGAAAAAAATACATAATGCATGTGGATGCAGCATGGGACGTGGTGAATAAGAAAAGTGCTATTGGTGTGGTGCTTCGTGACCATAAGGGCCAGTTAAAGCTAGCAATGCATAAGGGAGTTCCTATTTTTTCGTCACCTTTGTGTGCTGAGGTTGTCGTAGTGTTTGAGGGCCTTAAGCTTGCGCGTCGGAATGATGTCAAAAGTTTGTCGCTTTCTCCACGTTTGTGGTCGTCGAACTTTCCTGGTTGGATTGTTCAACAAGCTCAATATGAGCTTCAGTATTTTGTATCCCCTAGGGGAAGTATTTTGAGTTAA ATGGGGTATGCTCGTTGTGCTTGGAGAGCAAAGGAAGTGTGGACAAGGTTGGATGTGGGAGGTCAAATTGGATGGGAAAGAGACATGGACATTAAAGATAAATGGATCCATTTAGCTGACTCTGTTCCGGATACAGTTTTAGAGCGAATTTGTGTGGGGTGTTGGGCTATTTGGAATGATCGTAATAACACCATTCATAATCATCCTGTTCCTCCTGTTAATGTTCGTTGTGAATGGATTGATGATTATTTGTATGATTTTAAGACGACAAATCAGCGTATTGGTCGGAAGGCCCAGTCGATCCAAGATATTAACAGGTTGATTTCTCAAGGAAAAAAATACATAATGCATGTGGATGCAGCATGGGACGTGGTGAATAAGAAAAGTGCTATTGGTGTGGTGCTTCGTGACCATAAGGGCCAGTTAAAGCTAGCAATGCATAAGGGAGTTCCTATTTTTTCGTCACCTTTGTGTGCTGAGGTTGTCGTAGTGTTTGAGGGCCTTAAGCTTGCGCGTCGGAATGATGTCAAAAGTTTGTCGCTTTCTCCACGTTTGTGGTCGTCGAACTTTCCTGGTTGGATTGTTCAACAAGCTCAATATGAGCTTCAGTATTTTGTATCCCCTAGGGGAAGTATTTTGAGTTAA MGYARCAWRAKEVWTRLDVGGQIGWERDMDIKDKWIHLADSVPDTVLERICVGCWAIWNDRNNTIHNHPVPPVNVRCEWIDDYLYDFKTTNQRIGRKAQSIQDINRLISQGKKYIMHVDAAWDVVNKKSAIGVVLRDHKGQLKLAMHKGVPIFSSPLCAEVVVVFEGLKLARRNDVKSLSLSPRLWSSNFPGWIVQQAQYELQYFVSPRGSILS Homology
BLAST of Lcy06g020960 vs. ExPASy TrEMBL
Match: A0A6J1BQ49 (uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004786 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.3e-10 Identity = 48/172 (27.91%), Postives = 80/172 (46.51%), Query Frame = 0
BLAST of Lcy06g020960 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 3.0e-10 Identity = 48/180 (26.67%), Postives = 79/180 (43.89%), Query Frame = 0
BLAST of Lcy06g020960 vs. ExPASy TrEMBL
Match: A0A6J1CK80 (uncharacterized protein LOC111012047 OS=Momordica charantia OX=3673 GN=LOC111012047 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 6.8e-10 Identity = 42/154 (27.27%), Postives = 80/154 (51.95%), Query Frame = 0
BLAST of Lcy06g020960 vs. ExPASy TrEMBL
Match: A0A6J1CTE3 (uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014578 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.5e-09 Identity = 51/174 (29.31%), Postives = 78/174 (44.83%), Query Frame = 0
BLAST of Lcy06g020960 vs. ExPASy TrEMBL
Match: A0A7J9BAK4 (RNase H domain-containing protein (Fragment) OS=Gossypium gossypioides OX=34282 GN=Gogos_017354 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 4.4e-09 Identity = 40/136 (29.41%), Postives = 71/136 (52.21%), Query Frame = 0
BLAST of Lcy06g020960 vs. NCBI nr
Match: XP_022131661.1 (uncharacterized protein LOC111004786 [Momordica charantia]) HSP 1 Score: 75.9 bits (185), Expect = 4.8e-10 Identity = 48/172 (27.91%), Postives = 80/172 (46.51%), Query Frame = 0
BLAST of Lcy06g020960 vs. NCBI nr
Match: XP_024190234.1 (uncharacterized protein LOC112194221 [Rosa chinensis]) HSP 1 Score: 75.9 bits (185), Expect = 4.8e-10 Identity = 52/182 (28.57%), Postives = 85/182 (46.70%), Query Frame = 0
BLAST of Lcy06g020960 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 75.5 bits (184), Expect = 6.3e-10 Identity = 48/180 (26.67%), Postives = 79/180 (43.89%), Query Frame = 0
BLAST of Lcy06g020960 vs. NCBI nr
Match: XP_022141766.1 (uncharacterized protein LOC111012047 [Momordica charantia]) HSP 1 Score: 74.3 bits (181), Expect = 1.4e-09 Identity = 42/154 (27.27%), Postives = 80/154 (51.95%), Query Frame = 0
BLAST of Lcy06g020960 vs. NCBI nr
Match: XP_022145060.1 (uncharacterized protein LOC111014578 [Momordica charantia]) HSP 1 Score: 73.2 bits (178), Expect = 3.1e-09 Identity = 51/174 (29.31%), Postives = 78/174 (44.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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