Lcy06g019370 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g019370
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	NDR1/HIN1-like protein 10
Location	Chr06: 43989566 .. 43990172 (-)
RNA-Seq Expression	Lcy06g019370
Synteny	Lcy06g019370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCGATCATCATTTCTCTTTCGCAGCCGCCATGGGGCTCCTCTGCAGCATTCTGAAGATTGTAATTGGTTTAATCGTGGCGTTTGGCATTCTACTGTTGACATTGGGGCTTATTTACAAGCCAAGTGATCTCAGATTCCATGTCACCGGAGCCGAACTGACCCGATTCGACCACATCGACAATCAGCTCCATTACAAATTGGCTGTCAACGTTACCATCAGAAACCCCAACAAGCGCTACCGAGTCTACTACGACACCAACGAAATGGCTCTCCTTTATAAGAACCAGAGGCTCGACACCCACTGGCTGCCGCCCTTCTTCCAAGACACCAAGACCACCGCCGTCCTCAGCTCCAACGACTTCGAGGGCCAGCAGCTGGTGCTTTTTCTAGGCGGCGATGACCAAATTGAGTTCAACGCCGAGAAAGCTGCCGGCGTCTACCACATTGATGTCATGTTCTTTATCCGGTTGAGGTTGAAGTCCGGCGGGTTGGTGTTGAAGTATAAGCCAAAGGTGTACTGTGGATTGAAGGTTCCATTATTGACGGGTTACGGTGCAAACTCTGTTACCCATTTTCAGAACACTGACTGTGATTTCAAATTCTGA

mRNA sequence

ATCCGATCATCATTTCTCTTTCGCAGCCGCCATGGGGCTCCTCTGCAGCATTCTGAAGATTGTAATTGGTTTAATCGTGGCGTTTGGCATTCTACTGTTGACATTGGGGCTTATTTACAAGCCAAGTGATCTCAGATTCCATGTCACCGGAGCCGAACTGACCCGATTCGACCACATCGACAATCAGCTCCATTACAAATTGGCTGTCAACGTTACCATCAGAAACCCCAACAAGCGCTACCGAGTCTACTACGACACCAACGAAATGGCTCTCCTTTATAAGAACCAGAGGCTCGACACCCACTGGCTGCCGCCCTTCTTCCAAGACACCAAGACCACCGCCGTCCTCAGCTCCAACGACTTCGAGGGCCAGCAGCTGGTGCTTTTTCTAGGCGGCGATGACCAAATTGAGTTCAACGCCGAGAAAGCTGCCGGCGTCTACCACATTGATGTCATGTTCTTTATCCGGTTGAGGTTGAAGTCCGGCGGGTTGGTGTTGAAGTATAAGCCAAAGGTGTACTGTGGATTGAAGGTTCCATTATTGACGGGTTACGGTGCAAACTCTGTTACCCATTTTCAGAACACTGACTGTGATTTCAAATTCTGA

Coding sequence (CDS)

ATGGGGCTCCTCTGCAGCATTCTGAAGATTGTAATTGGTTTAATCGTGGCGTTTGGCATTCTACTGTTGACATTGGGGCTTATTTACAAGCCAAGTGATCTCAGATTCCATGTCACCGGAGCCGAACTGACCCGATTCGACCACATCGACAATCAGCTCCATTACAAATTGGCTGTCAACGTTACCATCAGAAACCCCAACAAGCGCTACCGAGTCTACTACGACACCAACGAAATGGCTCTCCTTTATAAGAACCAGAGGCTCGACACCCACTGGCTGCCGCCCTTCTTCCAAGACACCAAGACCACCGCCGTCCTCAGCTCCAACGACTTCGAGGGCCAGCAGCTGGTGCTTTTTCTAGGCGGCGATGACCAAATTGAGTTCAACGCCGAGAAAGCTGCCGGCGTCTACCACATTGATGTCATGTTCTTTATCCGGTTGAGGTTGAAGTCCGGCGGGTTGGTGTTGAAGTATAAGCCAAAGGTGTACTGTGGATTGAAGGTTCCATTATTGACGGGTTACGGTGCAAACTCTGTTACCCATTTTCAGAACACTGACTGTGATTTCAAATTCTGA

Protein sequence

MGLLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFDHIDNQLHYKLAVNVTIRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLFLGGDDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGLVLKYKPKVYCGLKVPLLTGYGANSVTHFQNTDCDFKF

Homology

[Close]

BLAST of Lcy06g019370 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.9e-33
Identity = 85/193 (44.04%), Postives = 114/193 (59.07%), Query Frame = 0


Query: 3   LLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFDHI--DNQLHYKLAVN 62
           LL   +K++I LIV  G+  L   LI +P  ++FHVT A LTRFDH   DN L Y LA+ 
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 63  VTIRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLFL 122
           V +RNPNKR  +YYD  E    Y+ +R  T  L PF+Q  K T VL+   F+GQ LV+F 
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPT-FQGQNLVIFN 156

Query: 123 GGDDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGLVL-KYKPKVYC-GLKVPLLTGYGANS 182
            G  +   NAE+ +GVY+I++ F +R+R K G L   + KPKV C  L++PL T  G  +
Sbjct: 157 AGQSR-TLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTT 216

Query: 183 VTHFQNTDCDFKF 192
            +      CDF F
Sbjct: 217 TSTVFPIKCDFDF 227

[Close]

BLAST of Lcy06g019370 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.4e-24
Identity = 75/192 (39.06%), Postives = 110/192 (57.29%), Query Frame = 0


Query: 3   LLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFD-HIDNQLHYKLAVNV 62
           +L  I  I+I + V  GI  L + LI++P+ ++FHVT A+LT F     N L Y L +N 
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNF 103

Query: 63  TIRNPNKRYRVYYDTNEMALLYKNQRLD-THWLPPFFQDTKTTAVLSSNDFEGQQLVLFL 122
           TIRNPN+R  VYYD  E+   Y +QR   ++ +  F+Q  K T V+ +    GQQLVL  
Sbjct: 104 TIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTK-LVGQQLVLLD 163

Query: 123 GGDDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGL-VLKYKPKVYCGLKVPLLTGYGANSV 182
           GG+ + + N +  + +Y ID    +++R K G +   ++KPK+ C LKVPL +   +  V
Sbjct: 164 GGERK-DLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFV 223

Query: 183 THFQNTDCDFKF 192
             FQ T CD  F
Sbjct: 224 --FQPTKCDVDF 231

[Close]

BLAST of Lcy06g019370 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.6e-21
Identity = 71/195 (36.41%), Postives = 109/195 (55.90%), Query Frame = 0


Query: 1   MGLLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFD-HIDNQLHYKLAV 60
           + L+C+IL   I + V  G+  L L LI++P+ ++F+V  A L RF    +N LHY L +
Sbjct: 52  LSLICNIL---IAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDL 111

Query: 61  NVTIRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLF 120
           N TIRNPN+R  VYYD   ++  Y +QR  +  +  F+Q  K T V+ +   EGQ LV+ 
Sbjct: 112 NFTIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTK-IEGQNLVV- 171

Query: 121 LGGDDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGL-VLKYKPKVYC-GLKVPLLTGYGAN 180
           LG   + +   ++ +G+Y I+    + +R K   +   K KPK+ C  LK+PL    G++
Sbjct: 172 LGDGARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPL----GSS 231

Query: 181 SVT---HFQNTDCDF 190
           + T    FQ   CDF
Sbjct: 232 NSTGGFKFQPVQCDF 237

[Close]

BLAST of Lcy06g019370 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.1e-19
Identity = 60/154 (38.96%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 30  KPSDLRFHVTGAELTRFD-HIDNQLHYKLAVNVTIRNPNKRYRVYYDTNEMALLYKNQRL 89
           + +D++F V  AELT FD   +N L Y L++N++IRN      ++YD  E  + Y NQRL
Sbjct: 3   RSNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 62

Query: 90  DTHWLPPFFQDTKTTAVLSSNDFEGQQLVLFLGGDDQIEFNAEKAAGVYHIDVMFFIRLR 149
               +P F+  +K T +L +  FEGQ LVL L G+++ +F  ++  GVY IDV   I  R
Sbjct: 63  GAVPMPLFYLGSKNTMLLRAL-FEGQTLVL-LKGNERKKFEDDQKTGVYRIDVKLSINFR 122

Query: 150 LKSGGLVL-KYKPKVYCGLKVPLLTGYGANSVTH 182
           +    LV    KP V C LK+PL  G   ++  H
Sbjct: 123 VMVLHLVTWPMKPVVRCHLKIPLALGSSNSTGGH 154

[Close]

BLAST of Lcy06g019370 vs. ExPASy TrEMBL
Match: A0A0A0LB18 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G779000 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.2e-61
Identity = 124/192 (64.58%), Postives = 150/192 (78.12%), Query Frame = 0


Query: 3   LLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFD---HIDNQLHYKLAV 62
           +LC+IL + IGLIV  GILLL LGL+Y P  L F+V+ A LT+F+      NQLHY LA+
Sbjct: 29  ILCTILMVAIGLIVGAGILLLILGLVYSPHKLVFNVSSARLTQFNLTTTSSNQLHYSLAL 88

Query: 63  NVTIRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLF 122
           NVTIRNPNKRYRVYYD NEMA+LYKNQRL T WLP FFQ+TK+T V+S N+F+GQ+L +F
Sbjct: 89  NVTIRNPNKRYRVYYDYNEMAVLYKNQRLATQWLPSFFQETKSTVVVSPNNFDGQKL-MF 148

Query: 123 LGGDDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGLVLKYKPKVYCGLKVPLLTGYGANSV 182
           L  D+ +EFNAEKA G+Y IDV FF RLR+KSG +VLK+KPKVYCGLKVPL +     S+
Sbjct: 149 LTSDEHVEFNAEKANGIYSIDVKFFFRLRMKSGQVVLKFKPKVYCGLKVPLGSDIDPKSI 208

Query: 183 THFQNTDCDFKF 192
           + F NTDCDF F
Sbjct: 209 SLFSNTDCDFSF 219

[Close]

BLAST of Lcy06g019370 vs. ExPASy TrEMBL
Match: A0A5A7TKJ3 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004480 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.5e-61
Identity = 123/191 (64.40%), Postives = 149/191 (78.01%), Query Frame = 0


Query: 3   LLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFDHI--DNQLHYKLAVN 62
           LLC+IL + IG IVA GILLL LGLIY P  L F+V+ A LT+F+     NQL Y LA+N
Sbjct: 30  LLCTILMVAIGFIVAVGILLLILGLIYSPHKLEFNVSSARLTQFNLTTGSNQLRYTLALN 89

Query: 63  VTIRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLFL 122
           VTIRNPNKRYRVYYD NEMA+LYKNQRL+THWLP FFQ++K+T V+  N+F+GQ+L +FL
Sbjct: 90  VTIRNPNKRYRVYYDANEMAILYKNQRLETHWLPLFFQESKSTVVVGPNNFDGQKL-MFL 149

Query: 123 GGDDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGLVLKYKPKVYCGLKVPLLTGYGANSVT 182
             D+ +EFNAEKA G+Y IDV FF RLR+KSG +VLK+KPKVYCGLKVPL +    N ++
Sbjct: 150 NSDEHVEFNAEKANGIYSIDVKFFFRLRMKSGQVVLKFKPKVYCGLKVPLGSDIDPNMIS 209

Query: 183 HFQNTDCDFKF 192
            F NT CDF F
Sbjct: 210 LFSNTACDFSF 219

[Close]

BLAST of Lcy06g019370 vs. ExPASy TrEMBL
Match: A0A1S3B8E0 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487150 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.5e-61
Identity = 123/191 (64.40%), Postives = 149/191 (78.01%), Query Frame = 0


Query: 3   LLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFDHI--DNQLHYKLAVN 62
           LLC+IL + IG IVA GILLL LGLIY P  L F+V+ A LT+F+     NQL Y LA+N
Sbjct: 29  LLCTILMVAIGFIVAVGILLLILGLIYSPHKLEFNVSSARLTQFNLTTGSNQLRYTLALN 88

Query: 63  VTIRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLFL 122
           VTIRNPNKRYRVYYD NEMA+LYKNQRL+THWLP FFQ++K+T V+  N+F+GQ+L +FL
Sbjct: 89  VTIRNPNKRYRVYYDANEMAILYKNQRLETHWLPLFFQESKSTVVVGPNNFDGQKL-MFL 148

Query: 123 GGDDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGLVLKYKPKVYCGLKVPLLTGYGANSVT 182
             D+ +EFNAEKA G+Y IDV FF RLR+KSG +VLK+KPKVYCGLKVPL +    N ++
Sbjct: 149 NSDEHVEFNAEKANGIYSIDVKFFFRLRMKSGQVVLKFKPKVYCGLKVPLGSDIDPNMIS 208

Query: 183 HFQNTDCDFKF 192
            F NT CDF F
Sbjct: 209 LFSNTACDFSF 218

[Close]

BLAST of Lcy06g019370 vs. ExPASy TrEMBL
Match: A0A6J1F4Y9 (NDR1/HIN1-like protein 10 OS=Cucurbita moschata OX=3662 GN=LOC111442212 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.7e-58
Identity = 119/189 (62.96%), Postives = 148/189 (78.31%), Query Frame = 0


Query: 3   LLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFDHIDNQLHYKLAVNVT 62
           +LC+ILK+ IG IV  GI+LL LGL+Y+P  L F+VT A+LT+F+   NQL+Y L +NVT
Sbjct: 29  VLCTILKVAIGFIVGVGIVLLILGLVYRPHKLEFNVTSAKLTQFNITANQLYYNLGLNVT 88

Query: 63  IRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLFLGG 122
           I NPNKRYRVYYDTNEM +LYKN+RL++  LP FFQDTK+TAVLS N+FEGQ+L+L L G
Sbjct: 89  ITNPNKRYRVYYDTNEMVVLYKNRRLNSLSLPAFFQDTKSTAVLSPNNFEGQRLIL-LAG 148

Query: 123 DDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGLVLKYKPKVYCGLKVPLLTGYGANSVTHF 182
           D+ +EFN+EKA G Y IDV FF RLR+KSG +VLK KPKV+CGL+VPL     + S   F
Sbjct: 149 DEIVEFNSEKAEGQYPIDVKFFFRLRMKSGEVVLKLKPKVHCGLRVPLSNAPKSFSFVFF 208

Query: 183 QNTDCDFKF 192
            NT CDF+F
Sbjct: 209 PNTACDFQF 216

[Close]

BLAST of Lcy06g019370 vs. ExPASy TrEMBL
Match: A0A6J1J6T7 (NDR1/HIN1-like protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111481750 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.5e-56
Identity = 117/189 (61.90%), Postives = 146/189 (77.25%), Query Frame = 0


Query: 3   LLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFDHIDNQLHYKLAVNVT 62
           +LC+ILK+ IG IV  GI+LL LG++Y+P  L F+VT A+LT+F+   NQL+Y L +NVT
Sbjct: 29  VLCTILKVAIGFIVGVGIVLLILGVVYRPHKLEFNVTTAKLTQFNITANQLYYNLGLNVT 88

Query: 63  IRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLFLGG 122
           IRNPN RYRVYYDTNEM +LYKN+RL++  LP FFQDTK++AVLS N FEGQ+L+L L G
Sbjct: 89  IRNPNSRYRVYYDTNEMVVLYKNRRLNSLSLPAFFQDTKSSAVLSPNKFEGQRLIL-LAG 148

Query: 123 DDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGLVLKYKPKVYCGLKVPLLTGYGANSVTHF 182
           D+ +EFN+EKA G Y IDV FF RLR+KSG +VLK KPKV+CGL+VPL       S   F
Sbjct: 149 DEIVEFNSEKAEGQYPIDVKFFFRLRMKSGEVVLKLKPKVHCGLRVPL--SNAPKSFVFF 208

Query: 183 QNTDCDFKF 192
            NT CDF+F
Sbjct: 209 PNTACDFQF 214

[Close]

BLAST of Lcy06g019370 vs. NCBI nr
Match: XP_038906030.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-61
Identity = 128/189 (67.72%), Postives = 148/189 (78.31%), Query Frame = 0


Query: 3   LLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFDHIDNQLHYKLAVNVT 62
           +LC+ILK+VIGLIV  GIL L LGL+Y+P  L F V+ A+LT F+   NQL YKLA NVT
Sbjct: 29  ILCTILKVVIGLIVVVGILFLILGLVYRPEKLEFDVSSAKLTEFNMTANQLFYKLAFNVT 88

Query: 63  IRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLFLGG 122
           IRNPNKRYRVYYDTNEMA+LYKNQRL T+WLP FFQDTKTTAVLS +D  GQ+  +FL  
Sbjct: 89  IRNPNKRYRVYYDTNEMAILYKNQRLRTYWLPEFFQDTKTTAVLSPDDIIGQR-QMFLTH 148

Query: 123 DDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGLVLKYKPKVYCGLKVPLLTGYGANSVTHF 182
           D+ +E+NAEKAA +Y IDV FF RLR+KSG +VLK +PKVYCGLKVPL    G NSV  F
Sbjct: 149 DEIVEYNAEKAAALYSIDVKFFFRLRMKSGEVVLKLRPKVYCGLKVPL--SNGPNSVFFF 208

Query: 183 QNTDCDFKF 192
            NT CDF F
Sbjct: 209 PNTACDFSF 214

[Close]

BLAST of Lcy06g019370 vs. NCBI nr
Match: XP_004136711.2 (NDR1/HIN1-like protein 10 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-61
Identity = 124/192 (64.58%), Postives = 150/192 (78.12%), Query Frame = 0


Query: 3   LLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFD---HIDNQLHYKLAV 62
           +LC+IL + IGLIV  GILLL LGL+Y P  L F+V+ A LT+F+      NQLHY LA+
Sbjct: 30  ILCTILMVAIGLIVGAGILLLILGLVYSPHKLVFNVSSARLTQFNLTTTSSNQLHYSLAL 89

Query: 63  NVTIRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLF 122
           NVTIRNPNKRYRVYYD NEMA+LYKNQRL T WLP FFQ+TK+T V+S N+F+GQ+L +F
Sbjct: 90  NVTIRNPNKRYRVYYDYNEMAVLYKNQRLATQWLPSFFQETKSTVVVSPNNFDGQKL-MF 149

Query: 123 LGGDDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGLVLKYKPKVYCGLKVPLLTGYGANSV 182
           L  D+ +EFNAEKA G+Y IDV FF RLR+KSG +VLK+KPKVYCGLKVPL +     S+
Sbjct: 150 LTSDEHVEFNAEKANGIYSIDVKFFFRLRMKSGQVVLKFKPKVYCGLKVPLGSDIDPKSI 209

Query: 183 THFQNTDCDFKF 192
           + F NTDCDF F
Sbjct: 210 SLFSNTDCDFSF 220

[Close]

BLAST of Lcy06g019370 vs. NCBI nr
Match: XP_008443594.1 (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 245.7 bits (626), Expect = 3.1e-61
Identity = 123/191 (64.40%), Postives = 149/191 (78.01%), Query Frame = 0


Query: 3   LLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFDHI--DNQLHYKLAVN 62
           LLC+IL + IG IVA GILLL LGLIY P  L F+V+ A LT+F+     NQL Y LA+N
Sbjct: 29  LLCTILMVAIGFIVAVGILLLILGLIYSPHKLEFNVSSARLTQFNLTTGSNQLRYTLALN 88

Query: 63  VTIRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLFL 122
           VTIRNPNKRYRVYYD NEMA+LYKNQRL+THWLP FFQ++K+T V+  N+F+GQ+L +FL
Sbjct: 89  VTIRNPNKRYRVYYDANEMAILYKNQRLETHWLPLFFQESKSTVVVGPNNFDGQKL-MFL 148

Query: 123 GGDDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGLVLKYKPKVYCGLKVPLLTGYGANSVT 182
             D+ +EFNAEKA G+Y IDV FF RLR+KSG +VLK+KPKVYCGLKVPL +    N ++
Sbjct: 149 NSDEHVEFNAEKANGIYSIDVKFFFRLRMKSGQVVLKFKPKVYCGLKVPLGSDIDPNMIS 208

Query: 183 HFQNTDCDFKF 192
            F NT CDF F
Sbjct: 209 LFSNTACDFSF 218

[Close]

BLAST of Lcy06g019370 vs. NCBI nr
Match: KAA0043822.1 (protein YLS9-like [Cucumis melo var. makuwa] >TYK25310.1 protein YLS9-like [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 3.1e-61
Identity = 123/191 (64.40%), Postives = 149/191 (78.01%), Query Frame = 0


Query: 3   LLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFDHI--DNQLHYKLAVN 62
           LLC+IL + IG IVA GILLL LGLIY P  L F+V+ A LT+F+     NQL Y LA+N
Sbjct: 30  LLCTILMVAIGFIVAVGILLLILGLIYSPHKLEFNVSSARLTQFNLTTGSNQLRYTLALN 89

Query: 63  VTIRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLFL 122
           VTIRNPNKRYRVYYD NEMA+LYKNQRL+THWLP FFQ++K+T V+  N+F+GQ+L +FL
Sbjct: 90  VTIRNPNKRYRVYYDANEMAILYKNQRLETHWLPLFFQESKSTVVVGPNNFDGQKL-MFL 149

Query: 123 GGDDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGLVLKYKPKVYCGLKVPLLTGYGANSVT 182
             D+ +EFNAEKA G+Y IDV FF RLR+KSG +VLK+KPKVYCGLKVPL +    N ++
Sbjct: 150 NSDEHVEFNAEKANGIYSIDVKFFFRLRMKSGQVVLKFKPKVYCGLKVPLGSDIDPNMIS 209

Query: 183 HFQNTDCDFKF 192
            F NT CDF F
Sbjct: 210 LFSNTACDFSF 219

[Close]

BLAST of Lcy06g019370 vs. NCBI nr
Match: KAG6580740.1 (NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.7 bits (600), Expect = 3.2e-58
Identity = 119/189 (62.96%), Postives = 148/189 (78.31%), Query Frame = 0


Query: 3   LLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFDHIDNQLHYKLAVNVT 62
           +LC+ILK+ IG IV  GI+LL LGL+Y+P  L F+VT A+LT+F+   NQL+Y L +NVT
Sbjct: 29  VLCTILKVAIGFIVGVGIVLLILGLVYRPHKLEFNVTSAKLTQFNITANQLYYNLGLNVT 88

Query: 63  IRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLFLGG 122
           I NPNKRYRVYYDTNEM +LYKN+RL++  LP FFQDTK+TAVLS N+FEGQ+L+L L G
Sbjct: 89  ITNPNKRYRVYYDTNEMVVLYKNRRLNSLSLPAFFQDTKSTAVLSPNNFEGQRLIL-LAG 148

Query: 123 DDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGLVLKYKPKVYCGLKVPLLTGYGANSVTHF 182
           D+ +EFN+EKA G Y IDV FF RLR+KSG +VLK KPKV+CGL+VPL     + S   F
Sbjct: 149 DEIVEFNSEKAEGQYPIDVKFFFRLRMKSGEVVLKLKPKVHCGLRVPLSNAPNSFSFVFF 208

Query: 183 QNTDCDFKF 192
            NT CDF+F
Sbjct: 209 PNTACDFQF 216

[Close]

BLAST of Lcy06g019370 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 143.3 bits (360), Expect = 2.0e-34
Identity = 85/193 (44.04%), Postives = 114/193 (59.07%), Query Frame = 0


Query: 3   LLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFDHI--DNQLHYKLAVN 62
           LL   +K++I LIV  G+  L   LI +P  ++FHVT A LTRFDH   DN L Y LA+ 
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 63  VTIRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLFL 122
           V +RNPNKR  +YYD  E    Y+ +R  T  L PF+Q  K T VL+   F+GQ LV+F 
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPT-FQGQNLVIFN 156

Query: 123 GGDDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGLVL-KYKPKVYC-GLKVPLLTGYGANS 182
            G  +   NAE+ +GVY+I++ F +R+R K G L   + KPKV C  L++PL T  G  +
Sbjct: 157 AGQSR-TLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTT 216

Query: 183 VTHFQNTDCDFKF 192
            +      CDF F
Sbjct: 217 TSTVFPIKCDFDF 227

[Close]

BLAST of Lcy06g019370 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-25
Identity = 72/190 (37.89%), Postives = 111/190 (58.42%), Query Frame = 0


Query: 1   MGLLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTR--FDHIDNQLHYKLA 60
           + ++C+IL   IG++V  G++ L L  I +P+ ++F VT A+LTR  FD   + LHY ++
Sbjct: 51  VNIICNIL---IGVLVCLGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNIS 110

Query: 61  VNVTIRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVL 120
           +N +IRNPN+R  ++YD  E+   Y +QR     +  F+Q  K T V+ + +  GQ+LVL
Sbjct: 111 LNFSIRNPNQRLGIHYDQLEVRGYYGDQRFSAANMTSFYQGHKNTTVVGT-ELNGQKLVL 170

Query: 121 FLGGDDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGL-VLKYKPKVYCGLKVPLLTGYGAN 180
            LG   + +F  ++ +GVY IDV    +LR K G L     +PK+ C LKVPL T   ++
Sbjct: 171 -LGAGGRRDFREDRRSGVYRIDVKLRFKLRFKFGFLNSWAVRPKIKCHLKVPLSTS-SSD 230

Query: 181 SVTHFQNTDC 188
               F  T C
Sbjct: 231 ERFQFHPTKC 234

[Close]

BLAST of Lcy06g019370 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-25
Identity = 75/192 (39.06%), Postives = 110/192 (57.29%), Query Frame = 0


Query: 3   LLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFD-HIDNQLHYKLAVNV 62
           +L  I  I+I + V  GI  L + LI++P+ ++FHVT A+LT F     N L Y L +N 
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNF 103

Query: 63  TIRNPNKRYRVYYDTNEMALLYKNQRLD-THWLPPFFQDTKTTAVLSSNDFEGQQLVLFL 122
           TIRNPN+R  VYYD  E+   Y +QR   ++ +  F+Q  K T V+ +    GQQLVL  
Sbjct: 104 TIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTK-LVGQQLVLLD 163

Query: 123 GGDDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGL-VLKYKPKVYCGLKVPLLTGYGANSV 182
           GG+ + + N +  + +Y ID    +++R K G +   ++KPK+ C LKVPL +   +  V
Sbjct: 164 GGERK-DLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFV 223

Query: 183 THFQNTDCDFKF 192
             FQ T CD  F
Sbjct: 224 --FQPTKCDVDF 231

[Close]

BLAST of Lcy06g019370 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 101.7 bits (252), Expect = 6.8e-22
Identity = 71/195 (36.41%), Postives = 109/195 (55.90%), Query Frame = 0


Query: 1   MGLLCSILKIVIGLIVAFGILLLTLGLIYKPSDLRFHVTGAELTRFD-HIDNQLHYKLAV 60
           + L+C+IL   I + V  G+  L L LI++P+ ++F+V  A L RF    +N LHY L +
Sbjct: 52  LSLICNIL---IAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDL 111

Query: 61  NVTIRNPNKRYRVYYDTNEMALLYKNQRLDTHWLPPFFQDTKTTAVLSSNDFEGQQLVLF 120
           N TIRNPN+R  VYYD   ++  Y +QR  +  +  F+Q  K T V+ +   EGQ LV+ 
Sbjct: 112 NFTIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTK-IEGQNLVV- 171

Query: 121 LGGDDQIEFNAEKAAGVYHIDVMFFIRLRLKSGGL-VLKYKPKVYC-GLKVPLLTGYGAN 180
           LG   + +   ++ +G+Y I+    + +R K   +   K KPK+ C  LK+PL    G++
Sbjct: 172 LGDGARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPL----GSS 231

Query: 181 SVT---HFQNTDCDF 190
           + T    FQ   CDF
Sbjct: 232 NSTGGFKFQPVQCDF 237

[Close]

BLAST of Lcy06g019370 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative )

HSP 1 Score: 96.7 bits (239), Expect = 2.2e-20
Identity = 60/154 (38.96%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 30  KPSDLRFHVTGAELTRFD-HIDNQLHYKLAVNVTIRNPNKRYRVYYDTNEMALLYKNQRL 89
           + +D++F V  AELT FD   +N L Y L++N++IRN      ++YD  E  + Y NQRL
Sbjct: 3   RSNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 62

Query: 90  DTHWLPPFFQDTKTTAVLSSNDFEGQQLVLFLGGDDQIEFNAEKAAGVYHIDVMFFIRLR 149
               +P F+  +K T +L +  FEGQ LVL L G+++ +F  ++  GVY IDV   I  R
Sbjct: 63  GAVPMPLFYLGSKNTMLLRAL-FEGQTLVL-LKGNERKKFEDDQKTGVYRIDVKLSINFR 122

Query: 150 LKSGGLVL-KYKPKVYCGLKVPLLTGYGANSVTH 182
           +    LV    KP V C LK+PL  G   ++  H
Sbjct: 123 VMVLHLVTWPMKPVVRCHLKIPLALGSSNSTGGH 154

The following BLAST results are available for this feature:

BLAST of Lcy06g019370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ52	2.9e-33	44.04	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FNH6	2.4e-24	39.06	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SRN1	9.6e-21	36.41	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9C615	3.1e-19	38.96	Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1	[more]

BLAST of Lcy06g019370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LB18	1.2e-61	64.58	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G779000 PE=4 ...	[more]
A0A5A7TKJ3	1.5e-61	64.40	Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00...	[more]
A0A1S3B8E0	1.5e-61	64.40	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487150 PE=4 SV=1	[more]
A0A6J1F4Y9	2.7e-58	62.96	NDR1/HIN1-like protein 10 OS=Cucurbita moschata OX=3662 GN=LOC111442212 PE=4 SV=...	[more]
A0A6J1J6T7	2.5e-56	61.90	NDR1/HIN1-like protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111481750 PE=4 SV=1	[more]

BLAST of Lcy06g019370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906030.1	1.1e-61	67.72	NDR1/HIN1-like protein 10 [Benincasa hispida]	[more]
XP_004136711.2	2.4e-61	64.58	NDR1/HIN1-like protein 10 [Cucumis sativus]	[more]
XP_008443594.1	3.1e-61	64.40	PREDICTED: protein YLS9-like [Cucumis melo]	[more]
KAA0043822.1	3.1e-61	64.40	protein YLS9-like [Cucumis melo var. makuwa] >TYK25310.1 protein YLS9-like [Cucu...	[more]
KAG6580740.1	3.2e-58	62.96	NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy06g019370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35980.1	2.0e-34	44.04	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35460.1	1.0e-25	37.89	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06320.1	1.7e-25	39.06	NDR1/HIN1-like 3	[more]
AT3G11650.1	6.8e-22	36.41	NDR1/HIN1-like 2	[more]
AT1G32270.1	2.2e-20	38.96	syntaxin, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 60..156 e-value: 3.8E-7 score: 30.6
None	No IPR available	PANTHER	PTHR31415:SF105	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 3..189
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 3..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g019370.1	Lcy06g019370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016020	membrane