Lcy06g018230 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g018230
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zinc finger CCCH domain-containing protein 14-like
Location	Chr06: 41816919 .. 41820778 (+)
RNA-Seq Expression	Lcy06g018230
Synteny	Lcy06g018230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAATGTTGATGTACTCAAAAAAAAAAAAAAAAAATGTAATAAACAATTTCCATTTATAATTGTAAAAAAAAAAACAATTTCCATTTATGTAGCATTAGCTCAGTCCGCCATAGGAACCTGCCTTTAAAACCCTAAATTTAAAATTCAAAATTCAAAATTCCATTTTAAATTACATAAATTGAAATTAAAATAATTACAATTTACAAATAACAAATTTCAGTGACATTAATTTCAGTATCAATTTTGCTGTCTTTTTCCTCTTTCCCACCGAAGCGACTGAGCTCTCACTCCATATTCCAAAACCCTTCTCTCTGGTCTAGACTCTAGGGTTGGAGTTAGGGTTTTCGCCCACTTCCAATTTTTACTTTTCTTTCTTCTTTTTGATCTTTTTTTTTTTGTAGAATTTAGGTCTTTAATCTTATCGTTTTAGGATTATTCTTTGGGTTTTTTCTTTTCGAGTTCGTTGGTTTGCTGTGGATCTCGATCTGGGTTTCTTAGCAATGGATACGCGCAAGAGAGGGAGGACGGAAGTTGGCTTAAATGCTAATGGCGGCTTGAAGAAGTCCAAGCAAGGTTTGTTCATCCTTTTCTTGCTCGTTTACTCCGCATTTCTCTTCTCTTTAAGTACTTCTTGACTTTTTTTTCTTTTTGGGCTCTACTGTATTACATTGTGTCGTTTTGAAGTTTTTGTTTCTGTAGAAGTTAATGTATTCTGGAGGTAAAAGGGGGAGTGTGTTGAACTGTAGGTTCGAAGTTGAGTACTAGGCAATTGATGGCTGACATTGGAATTTCAATTATTTTGTTATTTTTAGTTGTGGGTTTTTTTTTTTGGGTTAAATCCTGACATTTTTTCGGACGTTTCTGACTTCCAAGTTTGAAGAAGCTAAGGGGTTTTAAACTTTCTTGTGATGCCAACTGAAGATTAGAAACTTGACGTGGAAAAACTTCTCAACGAAATGTTAACATTTATTGGTGATTCTTGTTAGTTTACTTTATGGCGTAACAACTTGGATTTTCTTCTTTTTTGGATTCCTTTGCAACCATAACAACTGTTACATCCTCACGCAAGTTTCTTAAACTATTGTTTGCCATTGTTCTATTAATTTGAGATGCAAATTTGTACATATTTCATCATTGTTACTTAAAAAAGGGAGTGCAATGTTATTTATATGAGTAAAGTTAGTTAAAGAAACTAATGAATATTGGGCATAATATTAGCATTTAGTGTGGAATACTCCTTTCAGAACAATGAAAAACTTTTAGATGCACAATTTATTTGTTTTCCCATAAATTTGTAACGCACCGGTTACTGCAGGGGTTTCTAAAACTTTGGAAGCCTCCCCACCTCATTGAGGTGACCTGAATATGTCAATATAGAGACGTCAAAATCTTATAAAGGCATATTTAATCTTAAGAAGTTATTTGTTGGTTAATAATTCATTTAACTGTCAGGCATTTTAGAGTAATTATATTAAAATCTAGGAAAAGTGACTGAGAAAACAGTAATAAATTTTTTGTAACAGAAATGGAGTCCTTATCAACTGGTGTAGGAAGCAAATCGAAGCCATGCACCAAATTTTACAGGTTCAAATCTTCACTTGTCTAAATAAATACTTTGAAACTTATCTTATCCTTATCTTTATAAATTATTTTAAGAATCCAATTTTCATTTTACAAGACCCAGTTCTATAATCTTGCTCATGAAACAGGCAAAATTGCATACAGGTAAAAGATTTAACCATTATCTAGGAATATCTTGTATGGAGACCAACAGTATACACTTATTCATGCGAAAAGGATAATTGAACTGTGAAATCATGATTTTTTCTTCAGCTTATATTGGATCAGTACAATTTTCATTCAACATATTTCTCGTAAATTAAGAATATCTGCTTTGTCACAAATACTTGGTTAGCAGAATATTCTTCATGTTTTTAATCTTAAGAGTGTTTATCAAAAAAAAAAAAAACTTAAGAGTGTTATGGCTAGTGCTTTGATAGTGGTGTCAATTACTGAAACACTTTCTTTAGTGGCACTTTACAGAGGATGTATTTTAACTGGACCTTTCGAGAGTGCTATGAAATGATTTTGCCTGTGTGTATTCTATCAAATTTCAGAAGCAATTTGTCATACATAGCCAATCTGGTAAAACTATTTTCATAATATTAAAAATTTTAAACTCGTGTGTATTCTATCAAATTTCAGAAGCAATTATCCGTTCTGTCTCAAACTCGTGGGTGAGACATAGAACGAGTATTCTTCTCACTTATCTAAGTTATTCTGATCTAAGAAGTAACTGGGACTTTGAAAATCAGCTACTTGACTGAACCCAGCTTCGGCTATTTCAGAATCTCTGTTTTCATATCCTTTACTACTGTTCATAATGTTGAAAATTAGTGCTTCCTTGAATCATGCTGCTACAATTTCAGAATTTCCTAATAACTTGTTTTCTCCCTGTTGTTATCTTCTTCCATTAATGAATGGAGGAATATAAATCATCATACTTCTTTTTCGTTGCTCGTGATTTTGATCATCATTTGTGATTTTCTTTTTGAGTATATTTGATTTGGTGTGGATGGATTTAAAGAACTTTCTTTACCTTGTTTTGACTCTGCATATTTATGTTAAATCTGAAGCTAAACTTGGGGAATGTATTTAGTAGACTTTTCACTTGCATTATGCTTTGTGCATTTTATCCAAAGCTGTCGATTTGAAAAAGCATGAAATTAGTTGACACAGGACATCAGTGGTTTCAATGTAAATTTTCTTCATTCTGATAGTTTCTGTTACGGTTTCAGCACTGCTGGCTGCCCATTTGGTGAAGGATGCCATTTCCTGCATTATGTTCCTGGCGGTTATAACGCTGTTGCGCAAATGATGAACCTAGCACCTGCTCCTCCAGCACCTAGAAATATGGCAGCCCCTCCTCCAATGTCCAATGGCTCAGCCGCTTCGGCTGTTAAAACTCGTATGTGCAACAAGTATAACTCTGCTGAAGGCTGCAAGTTTGGTGACAAGTGCCATTTTGCTCACGGAGAATGGGAACTTGGAAAGCCTTTAGCTCCATCACACGACGACCCTTGGGCCATGGGACATATTCCAAATCGTTTACCCAGTAGGATGGATGCAGCTCCACCGGGCCCTGCAGCCAGCTTCGGCGCCTCTGCCACGGCAAAGATTAGTGTTGATGCTTCTCTTGCTGGACCCATCATAGGGAAGGGCGGTGTTAACTCCAAGCAGATTTGTCGTCAAACAGGAGCCAAACTTTCCATCAGGGACCACGAATCAGATCCCAACCTTAGAAACATTGAACTCGAGGGGACGTTCGATCAGATTAAGGAAGCAAGCGCAAAGGTGAGAGAGCTAATCGTGACGGTCTCAATGGCAGGCCCTCCAAAATCAGCCACCGGAGCAACGGGCGGCACGGCTGCTCCTGCTGGTAGCAATTACAAAACAAAACTTTGTGATAATTTTGCTAAAGGGTCTTGCACATTCGGAGAGAGATGCCACTTTGCGCATGGTGCTGCCGAGTTGCGCAAATCTGGTGCGTGATGAAATCCATTTTTCTAGTTTCTTTTAGAATTCTGGTGCAAGCCTTGGTTCAATCTATTGTATTAGATGGAGCTCTCTCTGTTGAATTATTACATGGCAATGCAACCAAGTGGAAAATTGACAGTTTTTATGGTTTAGTTTTGTGGAATCCATGCTTTGTCTCGTTTACTTTCATGCTTCCATTTTGCTATTAATTTGTAAATTTCTTTGCGAGGGACTATGGTCCTATTTCGCTCATTACTCTAAACCGTTACTAAAATGGGTAACCAAAATTGACAACTCAATAATGTGATTTAAGTTAAATT

mRNA sequence

CCCAAATGTTGATGTACTCAAAAAAAAAAAAAAAAAATGTAATAAACAATTTCCATTTATAATTGTAAAAAAAAAAACAATTTCCATTTATGTAGCATTAGCTCAGTCCGCCATAGGAACCTGCCTTTAAAACCCTAAATTTAAAATTCAAAATTCAAAATTCCATTTTAAATTACATAAATTGAAATTAAAATAATTACAATTTACAAATAACAAATTTCAGTGACATTAATTTCAGTATCAATTTTGCTGTCTTTTTCCTCTTTCCCACCGAAGCGACTGAGCTCTCACTCCATATTCCAAAACCCTTCTCTCTGGTCTAGACTCTAGGGTTGGAGTTAGGGTTTTCGCCCACTTCCAATTTTTACTTTTCTTTCTTCTTTTTGATCTTTTTTTTTTTGTAGAATTTAGGTCTTTAATCTTATCGTTTTAGGATTATTCTTTGGGTTTTTTCTTTTCGAGTTCGTTGGTTTGCTGTGGATCTCGATCTGGGTTTCTTAGCAATGGATACGCGCAAGAGAGGGAGGACGGAAGTTGGCTTAAATGCTAATGGCGGCTTGAAGAAGTCCAAGCAAGAAATGGAGTCCTTATCAACTGGTGTAGGAAGCAAATCGAAGCCATGCACCAAATTTTACAGCACTGCTGGCTGCCCATTTGGTGAAGGATGCCATTTCCTGCATTATGTTCCTGGCGGTTATAACGCTGTTGCGCAAATGATGAACCTAGCACCTGCTCCTCCAGCACCTAGAAATATGGCAGCCCCTCCTCCAATGTCCAATGGCTCAGCCGCTTCGGCTGTTAAAACTCGTATGTGCAACAAGTATAACTCTGCTGAAGGCTGCAAGTTTGGTGACAAGTGCCATTTTGCTCACGGAGAATGGGAACTTGGAAAGCCTTTAGCTCCATCACACGACGACCCTTGGGCCATGGGACATATTCCAAATCGTTTACCCAGTAGGATGGATGCAGCTCCACCGGGCCCTGCAGCCAGCTTCGGCGCCTCTGCCACGGCAAAGATTAGTGTTGATGCTTCTCTTGCTGGACCCATCATAGGGAAGGGCGGTGTTAACTCCAAGCAGATTTGTCGTCAAACAGGAGCCAAACTTTCCATCAGGGACCACGAATCAGATCCCAACCTTAGAAACATTGAACTCGAGGGGACGTTCGATCAGATTAAGGAAGCAAGCGCAAAGGTGAGAGAGCTAATCGTGACGGTCTCAATGGCAGGCCCTCCAAAATCAGCCACCGGAGCAACGGGCGGCACGGCTGCTCCTGCTGGTAGCAATTACAAAACAAAACTTTGTGATAATTTTGCTAAAGGGTCTTGCACATTCGGAGAGAGATGCCACTTTGCGCATGGTGCTGCCGAGTTGCGCAAATCTGGTGCGTGATGAAATCCATTTTTCTAGTTTCTTTTAGAATTCTGGTGCAAGCCTTGGTTCAATCTATTGTATTAGATGGAGCTCTCTCTGTTGAATTATTACATGGCAATGCAACCAAGTGGAAAATTGACAGTTTTTATGGTTTAGTTTTGTGGAATCCATGCTTTGTCTCGTTTACTTTCATGCTTCCATTTTGCTATTAATTTGTAAATTTCTTTGCGAGGGACTATGGTCCTATTTCGCTCATTACTCTAAACCGTTACTAAAATGGGTAACCAAAATTGACAACTCAATAATGTGATTTAAGTTAAATT

Coding sequence (CDS)

ATGGATACGCGCAAGAGAGGGAGGACGGAAGTTGGCTTAAATGCTAATGGCGGCTTGAAGAAGTCCAAGCAAGAAATGGAGTCCTTATCAACTGGTGTAGGAAGCAAATCGAAGCCATGCACCAAATTTTACAGCACTGCTGGCTGCCCATTTGGTGAAGGATGCCATTTCCTGCATTATGTTCCTGGCGGTTATAACGCTGTTGCGCAAATGATGAACCTAGCACCTGCTCCTCCAGCACCTAGAAATATGGCAGCCCCTCCTCCAATGTCCAATGGCTCAGCCGCTTCGGCTGTTAAAACTCGTATGTGCAACAAGTATAACTCTGCTGAAGGCTGCAAGTTTGGTGACAAGTGCCATTTTGCTCACGGAGAATGGGAACTTGGAAAGCCTTTAGCTCCATCACACGACGACCCTTGGGCCATGGGACATATTCCAAATCGTTTACCCAGTAGGATGGATGCAGCTCCACCGGGCCCTGCAGCCAGCTTCGGCGCCTCTGCCACGGCAAAGATTAGTGTTGATGCTTCTCTTGCTGGACCCATCATAGGGAAGGGCGGTGTTAACTCCAAGCAGATTTGTCGTCAAACAGGAGCCAAACTTTCCATCAGGGACCACGAATCAGATCCCAACCTTAGAAACATTGAACTCGAGGGGACGTTCGATCAGATTAAGGAAGCAAGCGCAAAGGTGAGAGAGCTAATCGTGACGGTCTCAATGGCAGGCCCTCCAAAATCAGCCACCGGAGCAACGGGCGGCACGGCTGCTCCTGCTGGTAGCAATTACAAAACAAAACTTTGTGATAATTTTGCTAAAGGGTCTTGCACATTCGGAGAGAGATGCCACTTTGCGCATGGTGCTGCCGAGTTGCGCAAATCTGGTGCGTGA

Protein sequence

MDTRKRGRTEVGLNANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFLHYVPGGYNAVAQMMNLAPAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGDKCHFAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDASLAGPIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVTVSMAGPPKSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGA

Homology

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BLAST of Lcy06g018230 vs. ExPASy Swiss-Prot
Match: Q7F8R0 (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.1e-91
Identity = 190/299 (63.55%), Postives = 215/299 (71.91%), Query Frame = 0


Query: 4   RKRGRTEVGLNANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFLHYVPG 63
           RKRG+ +    ANG   K  +E ES  TGVGSKSKPCTKF+ST+GCPFGEGCHFLH+ PG
Sbjct: 6   RKRGKPD---GANGAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHFPG 65

Query: 64  GYNAVAQMMNL---APAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGDKCH 123
           GY AVA+M NL   A APP P  M     + +G     VKTR+CNKYN+AEGCK+GDKCH
Sbjct: 66  GYQAVAKMTNLGGPAIAPP-PGRMPMGNAVPDGPPTPTVKTRLCNKYNTAEGCKWGDKCH 125

Query: 124 FAHGEWELGKPLAPSHDDPWAMGHIP--NRLPSRMDAAPPGPAASFGASATAKISVDASL 183
           FAHGE ELGKP+      P  MG  P  +  P  M +      ASFGASATAKISVDASL
Sbjct: 126 FAHGERELGKPMLMDSSMPPPMGPRPTGHFAPPPMPSPAMSTPASFGASATAKISVDASL 185

Query: 184 AGPIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVTV 243
           AG IIG+GGVN+KQI R TGAKL+IRDHESD NL+NIELEGTFDQIK ASA VRELIV++
Sbjct: 186 AGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQIKNASAMVRELIVSI 245

Query: 244 SMAGPP--KSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGA 296
               PP  K   G +     P GSN+KTKLC+NF KGSCTFG+RCHFAHG  ELRKS A
Sbjct: 246 GGGAPPQGKKPVGGSHRGGGP-GSNFKTKLCENFTKGSCTFGDRCHFAHGENELRKSAA 299

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BLAST of Lcy06g018230 vs. ExPASy Swiss-Prot
Match: Q7XPK1 (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 5.2e-90
Identity = 195/313 (62.30%), Postives = 216/313 (69.01%), Query Frame = 0


Query: 4   RKRGRTEVGLNANGGLK--KSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFLHYV 63
           RKR R +    ANGG    K  +E ES  TG+ SK KPCTKF+ST GCPFGEGCHF H+V
Sbjct: 8   RKRSRPD---TANGGAAGGKRSRETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFV 67

Query: 64  PGGYNAVAQMMNLA-PAPPAPRNMAAPPPM-----SNGSAASAVKTRMCNKYNSAEGCKF 123
           PGGY AVA+ +NL  PA PAP    A  PM      N   AS+ KTRMC KYN+AEGCKF
Sbjct: 68  PGGYQAVAKTLNLGNPAVPAP----ARAPMDHAAGGNSHPASSGKTRMCTKYNTAEGCKF 127

Query: 124 GDKCHFAHGEWELGKPLAPSHDDPWA--MGHIPNRLPSRMDAAPPG----PAASFGASAT 183
           GDKCHFAHGE ELGKP   SH+   A  MG    R   R +  PP     PA +FGASAT
Sbjct: 128 GDKCHFAHGERELGKPAYMSHESAMAPPMG---GRYGGRPEPPPPAAMGPPAGNFGASAT 187

Query: 184 AKISVDASLAGPIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASA 243
           AKISVDASLAG IIGKGGVN+KQICR TG KLSIRDHESD NL+NIELEG FDQIK+AS 
Sbjct: 188 AKISVDASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIKQASN 247

Query: 244 KVRELIVTVSMAGPPKSATGATGGTAAPAG-------SNYKTKLCDNFAKGSCTFGERCH 296
            V ELI T+S + P K   G+  G AAPAG       SNYKTKLC+NF KG+CTFG+RCH
Sbjct: 248 MVGELIATISPSTPAKKPAGSAAG-AAPAGRGGPGGRSNYKTKLCENFVKGTCTFGDRCH 307

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BLAST of Lcy06g018230 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.1e-84
Identity = 176/292 (60.27%), Postives = 202/292 (69.18%), Query Frame = 0


Query: 7   GRTEVGLNANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFLHYVPGGYN 66
           G+       NG  K+++   ES   GVGSK KPCTKF+ST+GCPFG  CHFLH  PGGY 
Sbjct: 6   GKRAAPEGTNGAAKRARAS-ESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGYQ 65

Query: 67  AVAQMMN---LAPAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGDKCHFAH 126
           A A+M +    A A P P  M   P   NG   S+VKTRMCNKYN+AEGCK+G KCHFAH
Sbjct: 66  AAAKMTSHGGTAVAAP-PGRMPLGPGAPNGPPTSSVKTRMCNKYNTAEGCKWGSKCHFAH 125

Query: 127 GEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDASLAGPII 186
           GE ELGKP+   +  P  MG +P   P  M      P ++FGASATAKISVDASLAG II
Sbjct: 126 GERELGKPMLLDNSMPHPMGSMPFEAPP-MPGPDIVPPSTFGASATAKISVDASLAGGII 185

Query: 187 GKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVTVSMAGP 246
           GKGG N+K I R TGAKL+IRD+ES+PNL+NIELEGTFDQIK ASA V ELIV +S   P
Sbjct: 186 GKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQIKHASAMVTELIVRISGNAP 245

Query: 247 PKSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGA 296
           P    G  G  A   GSN+KTKLC+NF KGSCTFG+RCHFAHG +ELRK  A
Sbjct: 246 PAKNPG-RGSHAGGPGSNFKTKLCENFNKGSCTFGDRCHFAHGESELRKPPA 293

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BLAST of Lcy06g018230 vs. ExPASy Swiss-Prot
Match: Q9C7C3 (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.2e-72
Identity = 164/303 (54.13%), Postives = 189/303 (62.38%), Query Frame = 0


Query: 1   MDTRKRGRTEVG-LNAN-GGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFL 60
           MDTRKRGR E G  N+N GG KKSKQEMES STG+GSKSKPCTKF+ST+GCPFGE CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNAVAQMMNLA-PAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGD 120
           HYVPGGYNAV+QM N+  P P   RNM                        S  G +F  
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNM----------------------QGSGNGGRFS- 120

Query: 121 KCHFAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDAS 180
                 G  E G                            PG  ++FG SATA+ SVDAS
Sbjct: 121 ------GRGESG----------------------------PGHVSNFGDSATARFSVDAS 180

Query: 181 LAGPIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVT 240
           LAG IIGKGGV+SKQICRQTG KLSI+DHE DPNL+NI LEGT +QI EASA V++LI  
Sbjct: 181 LAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIGR 240

Query: 241 VSMAG--PPKSATGATGGTAAPA----GSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR 295
           ++ A   PP    G  GG  +      GSN+KTK+C+ F+KG+CTFG+RCHFAHG AELR
Sbjct: 241 LNSAAKKPPGGGLGGGGGMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEAELR 246

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BLAST of Lcy06g018230 vs. ExPASy Swiss-Prot
Match: Q9FG30 (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=At5g06770 PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.9e-68
Identity = 154/297 (51.85%), Postives = 183/297 (61.62%), Query Frame = 0


Query: 1   MDTRKRGRTEVGL--NANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFL 60
           MD RKRGR E     N+NGG K+SKQEMES+STG+GSKSKPCTKF+ST+GCPFG+ CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HYVPGGYNAVAQMMNL-APAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGD 120
           HYVPGGYNA AQM NL  P     RNM                       +   G +F  
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRNMQG---------------------SGGPGGRFSG 120

Query: 121 KCHFAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDAS 180
           +                   DP +                 GP + FGAS T+KISVDAS
Sbjct: 121 R------------------GDPGS-----------------GPVSIFGAS-TSKISVDAS 180

Query: 181 LAGPIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVT 240
           LAG IIGKGG++SKQICR+TGAKLSI+DHE DPNL+ IELEGTF+QI  AS  VRELI  
Sbjct: 181 LAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIGR 238

Query: 241 VSMAGPPKSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 295
           +     P+   G  G      GSNYKTK+CD ++KG+CT+G+RCHFAHG +ELR+SG
Sbjct: 241 LGSVKKPQGIGGPEG--KPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSG 238

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BLAST of Lcy06g018230 vs. ExPASy TrEMBL
Match: A0A6J1E0P5 (zinc finger CCCH domain-containing protein 14-like OS=Momordica charantia OX=3673 GN=LOC111024859 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 1.9e-148
Identity = 269/295 (91.19%), Postives = 275/295 (93.22%), Query Frame = 0


Query: 1   MDTRKRGRTEVGLNANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFLHY 60
           MDTRKRGR EVGLNANGG K SKQEMESLSTGVGSKSKPCTKFYST GCPFGEGCHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGFKMSKQEMESLSTGVGSKSKPCTKFYSTTGCPFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLAPAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGDKCH 120
           VPGGYN VAQMMNL P PPA RNMAAPPPMSNGSA   VKTRMCNKYNSAEGCKFG+KCH
Sbjct: 61  VPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRMCNKYNSAEGCKFGEKCH 120

Query: 121 FAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDASLAG 180
           FAHGEWELGKPLAPSHDD  AMGHIPNRLPSRM+AAP GPAASFGASATAKISVDASLAG
Sbjct: 121 FAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAASFGASATAKISVDASLAG 180

Query: 181 PIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVTVSM 240
            IIGKGG+NSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASA VRELIVTVSM
Sbjct: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIVTVSM 240

Query: 241 AGPPKSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGA 296
           AGPPKSA    GGTAAP+G+N+KTKLCDNFAKGSCTFGERCHFAHGAAELRKSGA
Sbjct: 241 AGPPKSA----GGTAAPSGNNHKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGA 291

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BLAST of Lcy06g018230 vs. ExPASy TrEMBL
Match: A0A1S3B785 (zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LOC103486772 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 3.7e-147
Identity = 262/294 (89.12%), Postives = 274/294 (93.20%), Query Frame = 0


Query: 1   MDTRKRGRTEVGLNANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFLHY 60
           MDTRKRGR EVGLNANGGLKKSKQEME LSTGV SKSKPCTKFYST GCPFGE CHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGLKKSKQEMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLAPAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGDKCH 120
           VPGGYNAVAQMMNL PAPPAPRNM APPPMSNGSA   VK+RMCNKYNSAEGCKFGDKCH
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPMSNGSATQVVKSRMCNKYNSAEGCKFGDKCH 120

Query: 121 FAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDASLAG 180
           FAH EWELGKP APSHDDP ++GHIPNRL +RMDAAPP  AASFGAS+TAKISVDASLAG
Sbjct: 121 FAHAEWELGKPSAPSHDDPRSLGHIPNRLANRMDAAPPALAASFGASSTAKISVDASLAG 180

Query: 181 PIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVTVSM 240
            IIGKGG+NSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASA V+ELI+TVSM
Sbjct: 181 AIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELILTVSM 240

Query: 241 AGPPKSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 295
           AGPPKSA GATGGTA PAG+N+KTKLCDNFAKGSCTFGERCHFAHGAAELRKSG
Sbjct: 241 AGPPKSAIGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 294

[Close]

BLAST of Lcy06g018230 vs. ExPASy TrEMBL
Match: A0A0A0LEG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G808380 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 6.2e-147
Identity = 264/295 (89.49%), Postives = 275/295 (93.22%), Query Frame = 0


Query: 1   MDTRKRGRTEVGLNANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFLHY 60
           MDTRKRGR EVGL ANGGLKK+KQ+ME LSTGV SKSKPCTKFYST GCPFGE CHFLHY
Sbjct: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLAPAPPAPRNMAA-PPPMSNGSAASAVKTRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNL PAPPAPRNM A PPPMSNGSA  AVK+RMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDASLA 180
           HFAH EWELGKP APSHDDP +MGHIPNRL SRMDA PPG AASFGAS+TAKISVDASLA
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180

Query: 181 GPIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVTVS 240
           G IIGKGG+NSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASA V+ELIVTVS
Sbjct: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240

Query: 241 MAGPPKSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 295
           MAGPPKSATGATGGTA PAG+N+KTKLCDNFAKGSCTFGERCHFAHGAAELRKSG
Sbjct: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 295

[Close]

BLAST of Lcy06g018230 vs. ExPASy TrEMBL
Match: A0A6J1F0S5 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111441341 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.8e-141
Identity = 257/295 (87.12%), Postives = 265/295 (89.83%), Query Frame = 0


Query: 1   MDTRKRGRTEVGLNANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFLHY 60
           MD RKR + EVGLNANGG KKSKQEME LSTGV SKSKPCTKFYST GC FGEGCHFLHY
Sbjct: 1   MDYRKREKPEVGLNANGGFKKSKQEMEYLSTGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLAPAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGDKCH 120
           VPGGYNAVAQMMNL PAP APRNMAAP PMSNGS     KTRMCNKYNS EGCKFGDKCH
Sbjct: 61  VPGGYNAVAQMMNLEPAPSAPRNMAAPHPMSNGSTTQDAKTRMCNKYNSTEGCKFGDKCH 120

Query: 121 FAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDASLAG 180
           FAHGEWELG+P APSH+DP A G+ P+RLPSRM+AAP GPAASFGASATAKISVDASLAG
Sbjct: 121 FAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLAG 180

Query: 181 PIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVTVSM 240
            IIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASA VRELI TVSM
Sbjct: 181 AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVSM 240

Query: 241 AGPPKSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGA 296
           AGP K+AT  TGG AAPAGSNYKTKLCDNF KGSCTFGERCHFAHG+AELRKSGA
Sbjct: 241 AGPSKAATRTTGGPAAPAGSNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA 295

[Close]

BLAST of Lcy06g018230 vs. ExPASy TrEMBL
Match: A0A6J1J4L4 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita maxima OX=3661 GN=LOC111481711 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 5.1e-141
Identity = 254/295 (86.10%), Postives = 268/295 (90.85%), Query Frame = 0


Query: 1   MDTRKRGRTEVGLNANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFLHY 60
           MD RKRG++EVGLNAN G KKSKQE+E LSTGV SKSKPCTKFYST GC FGEGCHFLHY
Sbjct: 1   MDYRKRGKSEVGLNANAGFKKSKQELEYLSTGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLAPAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGDKCH 120
           VPGGYNAVAQMMNL PAPPAPR++AAP P+SNGS     KTRMCNKYNSAEGCKFGDKCH
Sbjct: 61  VPGGYNAVAQMMNLEPAPPAPRSIAAPHPLSNGSTTQDAKTRMCNKYNSAEGCKFGDKCH 120

Query: 121 FAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDASLAG 180
           FAHGEWELG+P APSH+DP   G+ P+RLPSRM+AAP GPAASFGASATAKISVDASLAG
Sbjct: 121 FAHGEWELGRPSAPSHEDPRDTGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLAG 180

Query: 181 PIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVTVSM 240
            IIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASA VR+LI TVSM
Sbjct: 181 AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRDLIATVSM 240

Query: 241 AGPPKSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGA 296
           AGPPK+AT ATGG AA AGSNYKTKLCDNF KGSCTFGERCHFAHG+AELRKSGA
Sbjct: 241 AGPPKAATRATGGPAATAGSNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA 295

[Close]

BLAST of Lcy06g018230 vs. NCBI nr
Match: XP_038906130.1 (zinc finger CCCH domain-containing protein 14-like [Benincasa hispida])

HSP 1 Score: 548.9 bits (1413), Expect = 2.7e-152
Identity = 271/294 (92.18%), Postives = 280/294 (95.24%), Query Frame = 0


Query: 1   MDTRKRGRTEVGLNANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFLHY 60
           MDTRKRGR+E+GLNANGGLKKSKQEME+LSTGV SKSKPCTKFYST GCPFGEGCHFLHY
Sbjct: 1   MDTRKRGRSEIGLNANGGLKKSKQEMENLSTGVPSKSKPCTKFYSTTGCPFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLAPAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGDKCH 120
           VPGGYNAVAQMMNL PAPPAPR+M APPPMSNGSA   VK+RMCNKYNSAEGCKFGDKCH
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRSMGAPPPMSNGSATQVVKSRMCNKYNSAEGCKFGDKCH 120

Query: 121 FAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDASLAG 180
           FAHG+WELGKP APSHDDP AMGHIPNRL SRMDA PPGPAASFGASATAKISVDASLAG
Sbjct: 121 FAHGDWELGKPTAPSHDDPRAMGHIPNRLSSRMDATPPGPAASFGASATAKISVDASLAG 180

Query: 181 PIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVTVSM 240
            IIGKGGVNSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASA VRELIVTVSM
Sbjct: 181 AIIGKGGVNSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVRELIVTVSM 240

Query: 241 AGPPKSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 295
           AGPPKSATGATGGTAAPAGSN+KTKLCDNFAKGSCTFGERCHFAHGAAELRK G
Sbjct: 241 AGPPKSATGATGGTAAPAGSNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKCG 294

[Close]

BLAST of Lcy06g018230 vs. NCBI nr
Match: XP_022158356.1 (zinc finger CCCH domain-containing protein 14-like [Momordica charantia])

HSP 1 Score: 535.0 bits (1377), Expect = 4.0e-148
Identity = 269/295 (91.19%), Postives = 275/295 (93.22%), Query Frame = 0


Query: 1   MDTRKRGRTEVGLNANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFLHY 60
           MDTRKRGR EVGLNANGG K SKQEMESLSTGVGSKSKPCTKFYST GCPFGEGCHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGFKMSKQEMESLSTGVGSKSKPCTKFYSTTGCPFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLAPAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGDKCH 120
           VPGGYN VAQMMNL P PPA RNMAAPPPMSNGSA   VKTRMCNKYNSAEGCKFG+KCH
Sbjct: 61  VPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRMCNKYNSAEGCKFGEKCH 120

Query: 121 FAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDASLAG 180
           FAHGEWELGKPLAPSHDD  AMGHIPNRLPSRM+AAP GPAASFGASATAKISVDASLAG
Sbjct: 121 FAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAASFGASATAKISVDASLAG 180

Query: 181 PIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVTVSM 240
            IIGKGG+NSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASA VRELIVTVSM
Sbjct: 181 AIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIVTVSM 240

Query: 241 AGPPKSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGA 296
           AGPPKSA    GGTAAP+G+N+KTKLCDNFAKGSCTFGERCHFAHGAAELRKSGA
Sbjct: 241 AGPPKSA----GGTAAPSGNNHKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGA 291

[Close]

BLAST of Lcy06g018230 vs. NCBI nr
Match: XP_008443064.1 (PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo])

HSP 1 Score: 530.8 bits (1366), Expect = 7.5e-147
Identity = 262/294 (89.12%), Postives = 274/294 (93.20%), Query Frame = 0


Query: 1   MDTRKRGRTEVGLNANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFLHY 60
           MDTRKRGR EVGLNANGGLKKSKQEME LSTGV SKSKPCTKFYST GCPFGE CHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGLKKSKQEMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLAPAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGDKCH 120
           VPGGYNAVAQMMNL PAPPAPRNM APPPMSNGSA   VK+RMCNKYNSAEGCKFGDKCH
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPMSNGSATQVVKSRMCNKYNSAEGCKFGDKCH 120

Query: 121 FAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDASLAG 180
           FAH EWELGKP APSHDDP ++GHIPNRL +RMDAAPP  AASFGAS+TAKISVDASLAG
Sbjct: 121 FAHAEWELGKPSAPSHDDPRSLGHIPNRLANRMDAAPPALAASFGASSTAKISVDASLAG 180

Query: 181 PIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVTVSM 240
            IIGKGG+NSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASA V+ELI+TVSM
Sbjct: 181 AIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELILTVSM 240

Query: 241 AGPPKSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 295
           AGPPKSA GATGGTA PAG+N+KTKLCDNFAKGSCTFGERCHFAHGAAELRKSG
Sbjct: 241 AGPPKSAIGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 294

[Close]

BLAST of Lcy06g018230 vs. NCBI nr
Match: XP_004136573.1 (zinc finger CCCH domain-containing protein 14 [Cucumis sativus] >KGN59309.1 hypothetical protein Csa_000911 [Cucumis sativus])

HSP 1 Score: 530.0 bits (1364), Expect = 1.3e-146
Identity = 264/295 (89.49%), Postives = 275/295 (93.22%), Query Frame = 0


Query: 1   MDTRKRGRTEVGLNANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFLHY 60
           MDTRKRGR EVGL ANGGLKK+KQ+ME LSTGV SKSKPCTKFYST GCPFGE CHFLHY
Sbjct: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLAPAPPAPRNMAA-PPPMSNGSAASAVKTRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNL PAPPAPRNM A PPPMSNGSA  AVK+RMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDASLA 180
           HFAH EWELGKP APSHDDP +MGHIPNRL SRMDA PPG AASFGAS+TAKISVDASLA
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180

Query: 181 GPIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVTVS 240
           G IIGKGG+NSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASA V+ELIVTVS
Sbjct: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240

Query: 241 MAGPPKSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 295
           MAGPPKSATGATGGTA PAG+N+KTKLCDNFAKGSCTFGERCHFAHGAAELRKSG
Sbjct: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 295

[Close]

BLAST of Lcy06g018230 vs. NCBI nr
Match: XP_023526424.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 521.9 bits (1343), Expect = 3.5e-144
Identity = 261/295 (88.47%), Postives = 270/295 (91.53%), Query Frame = 0


Query: 1   MDTRKRGRTEVGLNANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFLHY 60
           MD RKRG+ EVGLNANGG KKSKQEME LSTGV SKSKPCTKFYST GC FGEGCHFLHY
Sbjct: 1   MDYRKRGKPEVGLNANGGFKKSKQEMEYLSTGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLAPAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGDKCH 120
           VPGGYNAVAQMMNL PAPPAPR++AAP PMSNGS    VKTRMCNKYNSAEGCKFGDKCH
Sbjct: 61  VPGGYNAVAQMMNLEPAPPAPRSIAAPHPMSNGSTTQDVKTRMCNKYNSAEGCKFGDKCH 120

Query: 121 FAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDASLAG 180
           FAHGEWELG+P APSH+DP A G+ P+RLPSRM AAP GPAASFGASATAKISVDASLAG
Sbjct: 121 FAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMSAAPAGPAASFGASATAKISVDASLAG 180

Query: 181 PIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVTVSM 240
            IIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASA VRELI TVSM
Sbjct: 181 AIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVSM 240

Query: 241 AGPPKSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGA 296
           AGPPK+AT ATGG AAPAGSNYKTKLCDNF KGSCTFGERCHFAHG+AELRKSGA
Sbjct: 241 AGPPKAATRATGGPAAPAGSNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSGA 295

[Close]

BLAST of Lcy06g018230 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 273.9 bits (699), Expect = 1.5e-73
Identity = 164/303 (54.13%), Postives = 189/303 (62.38%), Query Frame = 0


Query: 1   MDTRKRGRTEVG-LNAN-GGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFL 60
           MDTRKRGR E G  N+N GG KKSKQEMES STG+GSKSKPCTKF+ST+GCPFGE CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNAVAQMMNLA-PAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGD 120
           HYVPGGYNAV+QM N+  P P   RNM                        S  G +F  
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNM----------------------QGSGNGGRFS- 120

Query: 121 KCHFAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDAS 180
                 G  E G                            PG  ++FG SATA+ SVDAS
Sbjct: 121 ------GRGESG----------------------------PGHVSNFGDSATARFSVDAS 180

Query: 181 LAGPIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVT 240
           LAG IIGKGGV+SKQICRQTG KLSI+DHE DPNL+NI LEGT +QI EASA V++LI  
Sbjct: 181 LAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIGR 240

Query: 241 VSMAG--PPKSATGATGGTAAPA----GSNYKTKLCDNFAKGSCTFGERCHFAHGAAELR 295
           ++ A   PP    G  GG  +      GSN+KTK+C+ F+KG+CTFG+RCHFAHG AELR
Sbjct: 241 LNSAAKKPPGGGLGGGGGMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEAELR 246

[Close]

BLAST of Lcy06g018230 vs. TAIR 10
Match: AT5G06770.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-69
Identity = 154/297 (51.85%), Postives = 183/297 (61.62%), Query Frame = 0


Query: 1   MDTRKRGRTEVGL--NANGGLKKSKQEMESLSTGVGSKSKPCTKFYSTAGCPFGEGCHFL 60
           MD RKRGR E     N+NGG K+SKQEMES+STG+GSKSKPCTKF+ST+GCPFG+ CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HYVPGGYNAVAQMMNL-APAPPAPRNMAAPPPMSNGSAASAVKTRMCNKYNSAEGCKFGD 120
           HYVPGGYNA AQM NL  P     RNM                       +   G +F  
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRNMQG---------------------SGGPGGRFSG 120

Query: 121 KCHFAHGEWELGKPLAPSHDDPWAMGHIPNRLPSRMDAAPPGPAASFGASATAKISVDAS 180
           +                   DP +                 GP + FGAS T+KISVDAS
Sbjct: 121 R------------------GDPGS-----------------GPVSIFGAS-TSKISVDAS 180

Query: 181 LAGPIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAKVRELIVT 240
           LAG IIGKGG++SKQICR+TGAKLSI+DHE DPNL+ IELEGTF+QI  AS  VRELI  
Sbjct: 181 LAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIGR 238

Query: 241 VSMAGPPKSATGATGGTAAPAGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 295
           +     P+   G  G      GSNYKTK+CD ++KG+CT+G+RCHFAHG +ELR+SG
Sbjct: 241 LGSVKKPQGIGGPEG--KPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSG 238

[Close]

BLAST of Lcy06g018230 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 56.2 bits (134), Expect = 5.1e-08
Identity = 65/226 (28.76%), Postives = 90/226 (39.82%), Query Frame = 0


Query: 87  PPPMSNGSAASAVKTRMCNKYNSAEGCKFGDKCHFAHGEWELGKPLAPSHDDPWAMGHIP 146
           PPP++ G+A    KTRMC K+  A  C+ G+ C+FAHG  +L +P  PS+   W      
Sbjct: 93  PPPVNKGTANIFYKTRMCAKFR-AGTCRNGELCNFAHGIEDLRQP--PSN---W------ 152

Query: 147 NRLPSRMDAAPPGPAASFGASATAKISVDASLAGPIIGKGGVNSKQICRQTGAKLSIRDH 206
                 +   PP            +     SLA  +      + K I R    +      
Sbjct: 153 ----QEIVGPPPAGQDRERERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGE 212

Query: 207 ESDPNLRNIELEGTFDQIKEASAKVRE---LIVTVSMAGPPKSA------TGATGGTAAP 266
           E     R   +     + +E S K+RE   + V  + A  P             G    P
Sbjct: 213 ECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVP 272

Query: 267 AGSN---------YKTKLCDNF-AKGSCTFGERCHFAHGAAELRKS 294
           A  N         +KT+LC  F   G C FG++CHFAHG AEL  S
Sbjct: 273 APMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNS 302

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BLAST of Lcy06g018230 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-07
Identity = 39/122 (31.97%), Postives = 52/122 (42.62%), Query Frame = 0


Query: 31  TGVGSKSKPCTKFYSTAGCPFGEGCHFLH-------------YVPGGYNAVAQMMNLAPA 90
           +G   K + C KFY+  GCP+GE C FLH               PGGY +     +   +
Sbjct: 169 SGRSFKGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGS 228

Query: 91  PPAPRNMAAPPPMSNGSAA-----------SAVKTRMCNKYNSAEGCKFGDKCHFAHGEW 129
                + +    +  G  +           S  KTR+CNK+     C FG KCHFAHG  
Sbjct: 229 VGGGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAA 288

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BLAST of Lcy06g018230 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 52.0 bits (123), Expect = 9.6e-07
Identity = 46/136 (33.82%), Postives = 61/136 (44.85%), Query Frame = 0


Query: 13  LNANGGLKKSKQEMESLSTGVGS---KSKPCTKFYSTAGCPF-GEGCHFLHYVPGGYNAV 72
           +N++G    SK+   S S+ +G    K+K C KF     CP+    CHF H         
Sbjct: 47  INSDGAESPSKKTRSSSSSEIGKSFFKTKLCFKF-RAGTCPYSASSCHFAH--------S 106

Query: 73  AQMMNLAPAPP---------APRNMA--APPPMSNGSAASAV-----KTRMCNKYNSAEG 129
           A+ + L P PP         A RN    A      G+ A  +     KTR+CNK+ +   
Sbjct: 107 AEELRLPPPPPPNWQETVTEASRNRESFAVSLGPRGNVAQTLKSPNWKTRICNKWQTTGY 166

The following BLAST results are available for this feature:

BLAST of Lcy06g018230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7F8R0	2.1e-91	63.55	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX...	[more]
Q7XPK1	5.2e-90	62.30	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX...	[more]
Q69XQ3	1.1e-84	60.27	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX...	[more]
Q9C7C3	2.2e-72	54.13	Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FG30	1.9e-68	51.85	Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Lcy06g018230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0P5	1.9e-148	91.19	zinc finger CCCH domain-containing protein 14-like OS=Momordica charantia OX=367...	[more]
A0A1S3B785	3.7e-147	89.12	zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0LEG5	6.2e-147	89.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G808380 PE=4 SV=1	[more]
A0A6J1F0S5	1.8e-141	87.12	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1J4L4	5.1e-141	86.10	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of Lcy06g018230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906130.1	2.7e-152	92.18	zinc finger CCCH domain-containing protein 14-like [Benincasa hispida]	[more]
XP_022158356.1	4.0e-148	91.19	zinc finger CCCH domain-containing protein 14-like [Momordica charantia]	[more]
XP_008443064.1	7.5e-147	89.12	PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo]	[more]
XP_004136573.1	1.3e-146	89.49	zinc finger CCCH domain-containing protein 14 [Cucumis sativus] >KGN59309.1 hypo...	[more]
XP_023526424.1	3.5e-144	88.47	zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy06g018230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12130.1	1.5e-73	54.13	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT5G06770.1	1.4e-69	51.85	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT3G19360.1	5.1e-08	28.76	Zinc finger (CCCH-type) family protein	[more]
AT1G32360.1	1.5e-07	31.97	Zinc finger (CCCH-type) family protein	[more]
AT2G35430.1	9.6e-07	33.82	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 261..287 e-value: 6.0E-8 score: 42.4 coord: 98..125 e-value: 0.034 score: 23.3 coord: 34..61 e-value: 4.8 score: 10.9
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 100..125 e-value: 1.4E-4 score: 21.7 coord: 262..286 e-value: 1.2E-9 score: 37.8
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 98..126 score: 13.337781
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 34..62 score: 11.948195
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 261..288 score: 16.558243
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 166..236 e-value: 7.9E-12 score: 55.3
None	No IPR available	PFAM	PF14608	zf-CCCH_2	coord: 39..59 e-value: 0.13 score: 12.8
None	No IPR available	GENE3D	4.10.1000.10		coord: 92..130 e-value: 1.8E-11 score: 45.2 coord: 260..293 e-value: 3.1E-14 score: 54.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 9..294
None	No IPR available	PANTHER	PTHR10288:SF273	TRANSCRIPTION FACTOR C3H FAMILY-RELATED	coord: 9..294
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 167..231 score: 14.21472
None	No IPR available	CDD	cd00105	KH-I	coord: 169..231 e-value: 1.6973E-14 score: 64.8887
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 170..232 e-value: 6.0E-11 score: 42.0
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 163..259 e-value: 2.9E-14 score: 54.7
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 158..237
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 35..60
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 98..129
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 260..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g018230.1	Lcy06g018230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding