Lcy06g017100 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAACACAATTAGATTCAAAACCTTAGTATTTATTTTTTAAAGAAAAAAAAAATACACTTTTAATCTCTTGGATTTAAGTTTAATTGCATTTTAGGTCATTGAGTTTTTAAACTTGACATTTTAGCCTAAAATGCAATTATTTGGGGGAGAGACCCTTTTCATGAAAGGTTACATGTGGCGAGTCGGAAATGGGAATTACATTGAAATAGACAAGGATCAGTGGATCAATAGGAAGGGTCCCAAAGCTCCTTTCTTTACCCCTGATAGGGGGTTGCAAAGTGAAGAGTCTCATTGACGAACGCAACAGGTGGATTGAAGCTAAGGTTAGAGAAAATTTTAACCAAGTCGACGCAATGGACATTCTCAATATTCCTCTCGGTGAGATCAATTCGAAGGACGAGATCATTTGGAGCCACGACCAGAAAGGGAAGTTTTCTGTGAAGAGTGCTTATCACTTGGCAACTTCAATTTCCTCGTCAAATGAGGCATCAACGTCGGATCATAGTCATTCGGCTGAGGCTTGGAGGAAATTGTGGAAGCTCAACATAATTCCTAGGGCCAAGATCTGTGCTTGGAAATTCATCAATGATATTCTTCCTAATTATGTTAATCTCCATTCTAAAGGGATTGATATTAACCAAGCTTGCTTTCTGTACAGGAAGAAGGATGAGACCTCCATTCATGCTATATGGGAATGCAAAATGGCTAAGGTGAGTTGGAAAGAGTTCATCCCTAAGTCCCTAAAGCTTTTCTCTCTGTGCACGGATCGGTGGTCATGTTGGGACTATTGGGCGTGGTGCTGCGAGAACCTAATCGAAGAGGAATTGGAAAAAGTTGTGGTGCTAATGTGGAGTATTTGGGAATTTAAAAACAAATGTCGCAACAACGCAATTAAAGGTCAACCAGACTACTCCCAAATTCACAGTCAAATCGCTAGAAATCTACAAGAAATCAAAGGAAGGACCAAGTCGTACTTGAGAGAAGCCAGTGGTTTACACTCCAAGAGCCACCAGAATCATGCGAAATGGACCCCCCCCTCCTCAAGGTCGTTGGAAATTTAATTCTGATGCTTCGTGGAATGCAGAGAAGGAGATCGGTGGCTTGGGGTGGGTTGTTCGTGATTCTGGCGGATCTCTGATCTGTGCGGGCTTGCAGTTAATCAAAGGTTCTTGGCCGATTAGCCTTTTAGAAGCCAAAGCGATGTGGGAAGGGCTTAAAATCTTACACAAAAATTTTGGCAACTCATTGAATGTGGAGGTCGAATCGGATGCCATCGATCTGATCCATTGCCTGCACAAAGATGAGGAGAATTTGACAGAGATCAAGACATTGATGAGCTAGCAAATTTGTACAAATTTGTGACAAATTTGACAGAGATATGCACAAATTTGTGACTTAGCAAGTGTGAGTTGCTT TGAACACAATTAGATTCAAAACCTTAGTATTTATTTTTTAAAGAAAAAAAAAATACACTTTTAATCTCTTGGATTTAAGTTTAATTGCATTTTAGGTCATTGAGTTTTTAAACTTGACATTTTAGCCTAAAATGCAATTATTTGGGGGAGAGACCCTTTTCATGAAAGGTTACATGTGGCGAGTCGGAAATGGGAATTACATTGAAATAGACAAGGATCAGTGGATCAATAGGAAGGGTCCCAAAGCTCCTTTCTTTACCCCTGATAGGGGGTTGCAAAGTGAAGAGTCTCATTGACGAACGCAACAGGTGGATTGAAGCTAAGGTTAGAGAAAATTTTAACCAAGTCGACGCAATGGACATTCTCAATATTCCTCTCGGTGAGATCAATTCGAAGGACGAGATCATTTGGAGCCACGACCAGAAAGGGAAGTTTTCTGTGAAGAGTGCTTATCACTTGGCAACTTCAATTTCCTCGTCAAATGAGGCATCAACGTCGGATCATAGTCATTCGGCTGAGGCTTGGAGGAAATTGTGGAAGCTCAACATAATTCCTAGGGCCAAGATCTGTGCTTGGAAATTCATCAATGATATTCTTCCTAATTATGTTAATCTCCATTCTAAAGGGATTGATATTAACCAAGCTTGCTTTCTGTACAGGAAGAAGGATGAGACCTCCATTCATGCTATATGGGAATGCAAAATGGCTAAGGTGAGTTGGAAAGAGTTCATCCCTAAGTCCCTAAAGCTTTTCTCTCTGTGCACGGATCGGTGGTCATGTTGGGACTATTGGGCGTGGTGCTGCGAGAACCTAATCGAAGAGGAATTGGAAAAAGTTGTGGTGCTAATGTGGAGTATTTGGGAATTTAAAAACAAATGTCGCAACAACGCAATTAAAGGTCAACCAGACTACTCCCAAATTCACAGTCAAATCGCTAGAAATCTACAAGAAATCAAAGGAAGGACCAAGTCGTACTTGAGAGAAGCCAGTGGTTTACACTCCAAGAGCCACCAGAATCATGCGAAATGGACCCCCCCCTCCTCAAGGTCGTTGGAAATTTAATTCTGATGCTTCGTGGAATGCAGAGAAGGAGATCGGTGGCTTGGGGTGGGTTGTTCGTGATTCTGGCGGATCTCTGATCTGTGCGGGCTTGCAGTTAATCAAAGGTTCTTGGCCGATTAGCCTTTTAGAAGCCAAAGCGATGTGGGAAGGGCTTAAAATCTTACACAAAAATTTTGGCAACTCATTGAATGTGGAGGTCGAATCGGATGCCATCGATCTGATCCATTGCCTGCACAAAGATGAGGAGAATTTGACAGAGATCAAGACATTGATGAGCTAGCAAATTTGTACAAATTTGTGACAAATTTGACAGAGATATGCACAAATTTGTGACTTAGCAAGTGTGAGTTGCTT ATGGACATTCTCAATATTCCTCTCGGTGAGATCAATTCGAAGGACGAGATCATTTGGAGCCACGACCAGAAAGGGAAGTTTTCTGTGAAGAGTGCTTATCACTTGGCAACTTCAATTTCCTCGTCAAATGAGGCATCAACGTCGGATCATAGTCATTCGGCTGAGGCTTGGAGGAAATTGTGGAAGCTCAACATAATTCCTAGGGCCAAGATCTGTGCTTGGAAATTCATCAATGATATTCTTCCTAATTATGTTAATCTCCATTCTAAAGGGATTGATATTAACCAAGCTTGCTTTCTGTACAGGAAGAAGGATGAGACCTCCATTCATGCTATATGGGAATGCAAAATGGCTAAGGTGAGTTGGAAAGAGTTCATCCCTAAGTCCCTAAAGCTTTTCTCTCTGTGCACGGATCGGTGGTCATGTTGGGACTATTGGGCGTGGTGCTGCGAGAACCTAATCGAAGAGGAATTGGAAAAAGTTGTGGTGCTAATGTGGAGTATTTGGGAATTTAAAAACAAATGTCGCAACAACGCAATTAAAGGTCAACCAGACTACTCCCAAATTCACAGTCAAATCGCTAGAAATCTACAAGAAATCAAAGGAAGGACCAAGTCGTACTTGAGAGAAGCCAGTGGTTTACACTCCAAGAGCCACCAGAATCATGCGAAATGGACCCCCCCCTCCTCAAGGTCGTTGGAAATTTAA MDILNIPLGEINSKDEIIWSHDQKGKFSVKSAYHLATSISSSNEASTSDHSHSAEAWRKLWKLNIIPRAKICAWKFINDILPNYVNLHSKGIDINQACFLYRKKDETSIHAIWECKMAKVSWKEFIPKSLKLFSLCTDRWSCWDYWAWCCENLIEEELEKVVVLMWSIWEFKNKCRNNAIKGQPDYSQIHSQIARNLQEIKGRTKSYLREASGLHSKSHQNHAKWTPPSSRSLEI Homology
BLAST of Lcy06g017100 vs. ExPASy TrEMBL
Match: M5Y023 (zf-RVT domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022315mg PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 4.8e-25 Identity = 79/244 (32.38%), Postives = 124/244 (50.82%), Query Frame = 0
BLAST of Lcy06g017100 vs. ExPASy TrEMBL
Match: A0A803Q0L2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 4.1e-24 Identity = 66/172 (38.37%), Postives = 99/172 (57.56%), Query Frame = 0
BLAST of Lcy06g017100 vs. ExPASy TrEMBL
Match: A0A803NQ77 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 4.1e-24 Identity = 78/230 (33.91%), Postives = 122/230 (53.04%), Query Frame = 0
BLAST of Lcy06g017100 vs. ExPASy TrEMBL
Match: A0A803PKZ1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 6.5e-22 Identity = 63/172 (36.63%), Postives = 94/172 (54.65%), Query Frame = 0
BLAST of Lcy06g017100 vs. ExPASy TrEMBL
Match: A0A6P9E5W8 (uncharacterized protein LOC108982175 OS=Juglans regia OX=51240 GN=LOC108982175 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.5e-21 Identity = 60/182 (32.97%), Postives = 95/182 (52.20%), Query Frame = 0
BLAST of Lcy06g017100 vs. NCBI nr
Match: XP_035539633.1 (uncharacterized protein LOC108982175 [Juglans regia]) HSP 1 Score: 112.5 bits (280), Expect = 5.1e-21 Identity = 60/182 (32.97%), Postives = 95/182 (52.20%), Query Frame = 0
BLAST of Lcy06g017100 vs. NCBI nr
Match: XP_022149515.1 (uncharacterized protein LOC111017927 [Momordica charantia]) HSP 1 Score: 112.1 bits (279), Expect = 6.7e-21 Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 0
BLAST of Lcy06g017100 vs. NCBI nr
Match: KAF5470771.1 (hypothetical protein F2P56_011262, partial [Juglans regia]) HSP 1 Score: 112.1 bits (279), Expect = 6.7e-21 Identity = 60/183 (32.79%), Postives = 95/183 (51.91%), Query Frame = 0
BLAST of Lcy06g017100 vs. NCBI nr
Match: XP_023902041.1 (uncharacterized protein LOC112013897 [Quercus suber]) HSP 1 Score: 112.1 bits (279), Expect = 6.7e-21 Identity = 71/227 (31.28%), Postives = 113/227 (49.78%), Query Frame = 0
BLAST of Lcy06g017100 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber]) HSP 1 Score: 109.0 bits (271), Expect = 5.6e-20 Identity = 70/227 (30.84%), Postives = 113/227 (49.78%), Query Frame = 0
BLAST of Lcy06g017100 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 70.1 bits (170), Expect = 2.7e-12 Identity = 53/235 (22.55%), Postives = 107/235 (45.53%), Query Frame = 0
BLAST of Lcy06g017100 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 45.1 bits (105), Expect = 9.3e-05 Identity = 25/71 (35.21%), Postives = 36/71 (50.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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