Homology
BLAST of Lcy06g016470 vs. ExPASy Swiss-Prot
Match:
Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)
HSP 1 Score: 253.4 bits (646), Expect = 4.3e-66
Identity = 142/359 (39.55%), Postives = 210/359 (58.50%), Query Frame = 0
Query: 33 KPVVNAQT--RLEDRTRDLKLDKLATQLRKLRIILKLHELMIDRKRGPFV--SLQIMSRW 92
KP + T + +DR RD D +K+R ++K H L++ + L ++R
Sbjct: 32 KPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARR 91
Query: 93 RNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVINDLETETVR 152
+ G F+ K+PHVF+++ HPV+R L CR+T K + I+ E + D + V
Sbjct: 92 LGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVT 151
Query: 153 RLKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLVDLE-----IVELV 212
RL+KL+MMS G + + +R+ E GLP F S++ K+ FRL+D E +E+V
Sbjct: 152 RLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIV 211
Query: 213 EKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTGFRIEAGFREKLRNWQRLSYA 272
EK N ++ +E+ RE E+R K + +V+++F +NFP GF+I FR + WQRL Y
Sbjct: 212 EKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYW 271
Query: 273 MPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRE 332
PYE G+ +RS R EKR+VA +HELLSLTVEK + +ER+ HFR + ++E
Sbjct: 272 SPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKE 331
Query: 333 LLLKHPGIFYISTKGN---TQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGRRHTK 380
LL+H GIFYIST+GN VFLRE Y +G LVEPN +Y+ RR++ +LVL+ R K
Sbjct: 332 FLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390
BLAST of Lcy06g016470 vs. ExPASy Swiss-Prot
Match:
Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)
HSP 1 Score: 151.4 bits (381), Expect = 2.3e-35
Identity = 116/382 (30.37%), Postives = 200/382 (52.36%), Query Frame = 0
Query: 32 RKPVVNAQTRLEDRTRDLKLDKLATQLRKLRIILKLHELMIDRKRGPFVSLQIMSRWRNI 91
R+ V AQ ++ R +++ D + + +KL+++LKL +++ +SL+ + R+R
Sbjct: 51 RRLAVVAQAAVK-RRKEIPFDNVIQRDKKLKLVLKLRNILVSNP-DRVMSLRDLGRFRRD 110
Query: 92 VAL--NIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVINDLETETVRR 151
+ L + + ++P VF+V V +L R+T L E ++ N+ E V +
Sbjct: 111 LGLTRKRRLIALLKRFPGVFEVVEEGV-YSLRFRLTPAAERLYLDELHLKNESEGLAVTK 170
Query: 152 LKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLVDLEI---VELVEKH 211
L+KLLMMS + + + + + +LGLP FR++I +Y FR+V ++ +EL
Sbjct: 171 LRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWD 230
Query: 212 ENGAVAEVEQWREREFREKWLSEFNVKYAFPINF-----PTGFRIEAGFREKLRNWQRLS 271
AV+ E E E R + E N+ P+ F P G ++ G ++ ++ +
Sbjct: 231 PELAVSAAEV-AEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMP 290
Query: 272 YAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNI 331
Y PY F G ++ EK A V+HE+LSLT+EK V+ L HFR +F ++
Sbjct: 291 YISPY---SDFSHLRSGSAEK-EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSL 350
Query: 332 RELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGRRHTKQL 391
R +L++HP +FY+S KG+ VFLREAY LVE + + +++ KM+ LV + R + +
Sbjct: 351 RGMLIRHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGV 410
Query: 392 ESSMENDSAAYNGDWLSQSEGS 404
++ E ++ NG SEGS
Sbjct: 411 PATSE-EADRTNGAAQMLSEGS 423
BLAST of Lcy06g016470 vs. ExPASy Swiss-Prot
Match:
A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)
HSP 1 Score: 149.4 bits (376), Expect = 8.7e-35
Identity = 111/390 (28.46%), Postives = 192/390 (49.23%), Query Frame = 0
Query: 3 SFESALSLSTTNFSRIRF--------GPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKL 62
S +S L +ST +R +F + + +R + VV R ++L D +
Sbjct: 28 SVKSGLPMSTIRAARSQFMGEGLILGNKYGFWSTSRKTRVVVEPVRAAVKRRKELTFDSV 87
Query: 63 ATQLRKLRIILKLHELMIDRKRGPFVSLQIMSRWRNIVAL--NIGIGEFVHKYPHVFDVF 122
+ +KL+++L + ++++ + +SL+ + ++R + L + KYP VF++
Sbjct: 88 VQRDKKLKLVLNIRKILVSQP-DRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEIV 147
Query: 123 SHPVRRNLCCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISK 182
+L ++T + L E + N+LE V +L+KL+MMS++ + + + +
Sbjct: 148 EEGA-YSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHLKT 207
Query: 183 ELGLPNGFRESILAKYSDDFRLVDL---EIVELVEKHENGAVAEVE----QWREREFREK 242
+LGLP FR++I +Y FR+V +EL AV+ E R RE E+
Sbjct: 208 DLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAELSEDDNRTRESEER 267
Query: 243 WLSEFNVKYAFPINFPTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEK 302
L + P G + K+ ++ + Y PY + F G +++ EK
Sbjct: 268 NLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPY---KDFSHLRSGTLEK-EK 327
Query: 303 RAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFL 362
A V+HELLSLT EK V+ L HFR +F +R +L++HP +FY+S KG VFL
Sbjct: 328 HACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFL 387
Query: 363 REAYAKGCLVEPNPIYMVRRKMQDLVLLGR 376
REAY L++ +P+ +V+ KM+ LV + R
Sbjct: 388 REAYRNSELIDKDPLTLVKEKMRALVSVPR 411
BLAST of Lcy06g016470 vs. ExPASy Swiss-Prot
Match:
B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)
HSP 1 Score: 149.4 bits (376), Expect = 8.7e-35
Identity = 114/362 (31.49%), Postives = 185/362 (51.10%), Query Frame = 0
Query: 30 RWRKPVVNAQTRLEDRTRDLKLDKLATQLRKLRIILKLHELMID--------RKRGPFVS 89
R R V AQ ++ R ++ D + + +KL+++LKL +++ R+ G F
Sbjct: 43 RPRPAAVVAQAAVK-RRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRR 102
Query: 90 LQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVIND 149
++R R ++AL + ++P VFDV V +L R+T L E + N+
Sbjct: 103 DLGLTRKRRLIAL-------LRRFPGVFDVVEEGV-YSLRFRLTPAAERLYLDELRLRNE 162
Query: 150 LETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLVDLE--- 209
E V +L+KLLMMS + + + + +LGLP FR+++ +Y FR+V ++
Sbjct: 163 SEGLAVAKLRKLLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGP 222
Query: 210 IVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINF-----PTGFRIEAGFREK 269
+EL AV+ E E E R + E N+ P+ F P G ++ G +
Sbjct: 223 ALELTHWDPELAVSAAE-LAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARR 282
Query: 270 LRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRR 329
+ ++ + Y PY +RS G EK A V+HE+LSLTVEK V+ L HFR
Sbjct: 283 IARFKEMPYISPYADFS--HLRS--GSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFRE 342
Query: 330 DFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLL 376
+F ++R ++++HP +FY+S KG+ VFLREAY LVE N + +++ KM+ LV +
Sbjct: 343 EFRFSQSLRGMIIRHPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAV 390
BLAST of Lcy06g016470 vs. ExPASy Swiss-Prot
Match:
Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)
HSP 1 Score: 104.4 bits (259), Expect = 3.2e-21
Identity = 92/343 (26.82%), Postives = 156/343 (45.48%), Query Frame = 0
Query: 47 RDLKLDKLATQLR--KLRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHK 106
RD D + LR +L+ ++ L ++ ++ + + +S+ ++ I F+ K
Sbjct: 33 RDPYFDNIEHILRSSQLKSVVSLKNCIV-QEPNRCIPISAISKKTRQFDVSTKIAHFLRK 92
Query: 107 YPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHV 166
+P +F+ F P R+T + L +QE V + RLKKL++MS + L +
Sbjct: 93 FPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPL 152
Query: 167 HALRLISKELGLPNGFRESILAKYSDDFRLVDLE--IVELVEKHENG-AVAEVEQWRERE 226
++ + LGLP+ + + FR VD+E + L + G V V Q +
Sbjct: 153 SIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNAMK 212
Query: 227 FREKWLSEFNVKYAFPINFPTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQ 286
R +S ++ FP+ G R+ + L +Q+L Y PY+ S
Sbjct: 213 KRRGEVSLEEIE--FPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSS----D 272
Query: 287 RHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ 346
EKR V LHELL L VE + ++L+ ++ F + + + +HP IFY+S K T
Sbjct: 273 IAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTC 332
Query: 347 VVFLREAYAKGCLVEPNPIYMVRRKM------QDLVLLGRRHT 379
LRE Y VE +P+ VR+K +L+L RR++
Sbjct: 333 TAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNS 368
BLAST of Lcy06g016470 vs. ExPASy TrEMBL
Match:
A0A6J1FCB5 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444101 PE=4 SV=1)
HSP 1 Score: 739.2 bits (1907), Expect = 9.5e-210
Identity = 368/416 (88.46%), Postives = 388/416 (93.27%), Query Frame = 0
Query: 1 MKSFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRK 60
MK FESA SLSTT+FSR+RFGPFNHFCQ RW KP V AQTRLEDRTRDLKLDKLATQ+RK
Sbjct: 1 MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRK 60
Query: 61 LRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNL 120
LRII KL ELMIDRKRGPFVSLQIMSRWRN V L IGIG+FVHKYPHVFDVF HP+RRNL
Sbjct: 61 LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120
Query: 121 CCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGF 180
CCRITGKM AL+KQEENVIND E ETV+RLKKLLMMSVNG LH+HALRLISKELGLP+GF
Sbjct: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGF 180
Query: 181 RESILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINF 240
RESIL KYSDDFRLVDLEIVELV+KHEN AVAEVEQWREREFREKWLSEF+VK+AFPINF
Sbjct: 181 RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF 240
Query: 241 PTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVE 300
PTGF+I+ GFREKLRNWQRL YA PYEKRQGFGVRSCGG+ R EKRAVAVLHELLSLTVE
Sbjct: 241 PTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE 300
Query: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPI 360
KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAYAKGCLVEPNPI
Sbjct: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPI 360
Query: 361 YMVRRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
Y+VRRKMQDL+LLGRRHTKQLESSM E+ SAA NGDWLS+SEGSWVLPILQGFD
Sbjct: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416
BLAST of Lcy06g016470 vs. ExPASy TrEMBL
Match:
A0A6J1I6W3 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470166 PE=4 SV=1)
HSP 1 Score: 729.9 bits (1883), Expect = 5.7e-207
Identity = 364/416 (87.50%), Postives = 385/416 (92.55%), Query Frame = 0
Query: 1 MKSFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRK 60
MK FESA SLSTT+FSR+RFGPFNHFCQ RW KP V AQTRLEDR RDLKLD LATQ+RK
Sbjct: 1 MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRK 60
Query: 61 LRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNL 120
LRII KL ELMIDRKRGPFVSLQIMSRWRN V L IGIG+FVHKYPHVFDVF HP+RRNL
Sbjct: 61 LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120
Query: 121 CCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGF 180
CCRITGKM AL+KQEENVIND E ETV+RLKKLLMMS NG LH+HALRLISKELGLP+GF
Sbjct: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGF 180
Query: 181 RESILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINF 240
RESIL KYSDDFRLVDLEIVELV+KHEN AVAEVEQWREREFREKWLSEF+VK+AFPINF
Sbjct: 181 RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF 240
Query: 241 PTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVE 300
PTG++I+ GFREKLRNWQRL YA PYEKRQGFGVRSCGG+ RHEKRAVAVLHELLSLTVE
Sbjct: 241 PTGYKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVE 300
Query: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPI 360
KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAYAKGCLVEPNPI
Sbjct: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPI 360
Query: 361 YMVRRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
Y+VRRKMQDL+LLGRRHTKQLESSM E+ SAA NGD LS+SEGSWVLPILQGFD
Sbjct: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 416
BLAST of Lcy06g016470 vs. ExPASy TrEMBL
Match:
A0A0A0LFE1 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816690 PE=4 SV=1)
HSP 1 Score: 729.2 bits (1881), Expect = 9.8e-207
Identity = 360/413 (87.17%), Postives = 384/413 (92.98%), Query Frame = 0
Query: 4 FESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRKLRI 63
FES + LS FSRI FGPFNHFCQ RWRKP+VNAQTRLEDRTRDLKLDKLATQL+K R+
Sbjct: 7 FESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQLKKFRV 66
Query: 64 ILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCR 123
ILKL+ELM +RKRGPFVSLQIMSRWRNIV + IGIGEF+HKYPH+FD+F HPVRRNLCCR
Sbjct: 67 ILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCCR 126
Query: 124 ITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRES 183
ITGKM AL+KQEENVIND+E ETV+RLKKLLMMSVNG LHVHALRLIS+ELGLP+GFRES
Sbjct: 127 ITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRES 186
Query: 184 ILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTG 243
IL KYSDDFRLVDLEIVELVEKH+NGA+AEVE+WREREFREKWLSEF+VKYAFPINFPTG
Sbjct: 187 ILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFPINFPTG 246
Query: 244 FRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLV 303
F IE GFREKLRNWQRL Y PYEKRQGFG RS GG+QRHEKRAVAVLHELLSLTVEKLV
Sbjct: 247 FIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLV 306
Query: 304 DVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMV 363
DVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKG TQ+VFLREAYAKGCLVEPNPIY+V
Sbjct: 307 DVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEPNPIYIV 366
Query: 364 RRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
RRKMQDLVLLGRRHTKQLESSM END+A NGDWLS+SEGSWVLPILQGFD
Sbjct: 367 RRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 419
BLAST of Lcy06g016470 vs. ExPASy TrEMBL
Match:
A0A1S3B7J9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103486860 PE=4 SV=1)
HSP 1 Score: 725.7 bits (1872), Expect = 1.1e-205
Identity = 361/413 (87.41%), Postives = 382/413 (92.49%), Query Frame = 0
Query: 4 FESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRKLRI 63
FES LS FSRI FGPFNHFCQ RWRKPVV+AQTRLE RTRDLKLDKLATQL+K R+
Sbjct: 7 FESPFFLSKPTFSRIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQLQKFRV 66
Query: 64 ILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCR 123
ILKLHELM +RKRGPFVSLQIMSRWRNIV + IGIGEF+HKYPHVFDVF HPVRRNLCCR
Sbjct: 67 ILKLHELMTNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVRRNLCCR 126
Query: 124 ITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRES 183
ITGKM AL+KQEENVIND+E ETV+RLKKLLMMSVNG LHVHALRLIS+ELGLP+GFRES
Sbjct: 127 ITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRES 186
Query: 184 ILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTG 243
IL KYSDDFRLVDLEIVELVEKHE+GAVAEVE+WREREFREKWLSEF+VKYAFPINFPTG
Sbjct: 187 ILEKYSDDFRLVDLEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFPINFPTG 246
Query: 244 FRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLV 303
F IE GFREKLRNWQRL Y PYEKRQ FG RS GG+QRHEKRAVAVLHELLSLTVEKLV
Sbjct: 247 FIIEGGFREKLRNWQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLV 306
Query: 304 DVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMV 363
DV+RLVHFRRDFAIEVNIRELLLKHPG+FYISTKG TQ+VFLREAYAKGCLVEPNPIY+V
Sbjct: 307 DVDRLVHFRRDFAIEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEPNPIYIV 366
Query: 364 RRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
RRKMQDLVLLGRRHTKQLESSM END+AA NGDWLS+SEGSWVLPILQGFD
Sbjct: 367 RRKMQDLVLLGRRHTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 419
BLAST of Lcy06g016470 vs. ExPASy TrEMBL
Match:
A0A6J1FCD7 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444101 PE=4 SV=1)
HSP 1 Score: 717.6 bits (1851), Expect = 2.9e-203
Identity = 356/401 (88.78%), Postives = 375/401 (93.52%), Query Frame = 0
Query: 16 SRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRKLRIILKLHELMIDRK 75
SR+RFGPFNHFCQ RW KP V AQTRLEDRTRDLKLDKLATQ+RKLRII KL ELMIDRK
Sbjct: 7 SRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRK 66
Query: 76 RGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQE 135
RGPFVSLQIMSRWRN V L IGIG+FVHKYPHVFDVF HP+RRNLCCRITGKM AL+KQE
Sbjct: 67 RGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQE 126
Query: 136 ENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLV 195
ENVIND E ETV+RLKKLLMMSVNG LH+HALRLISKELGLP+GFRESIL KYSDDFRLV
Sbjct: 127 ENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLV 186
Query: 196 DLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTGFRIEAGFREKLR 255
DLEIVELV+KHEN AVAEVEQWREREFREKWLSEF+VK+AFPINFPTGF+I+ GFREKLR
Sbjct: 187 DLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLR 246
Query: 256 NWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDF 315
NWQRL YA PYEKRQGFGVRSCGG+ R EKRAVAVLHELLSLTVEKLVDVERLVHFRRDF
Sbjct: 247 NWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDF 306
Query: 316 AIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGR 375
AIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAYAKGCLVEPNPIY+VRRKMQDL+LLGR
Sbjct: 307 AIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR 366
Query: 376 RHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
RHTKQLESSM E+ SAA NGDWLS+SEGSWVLPILQGFD
Sbjct: 367 RHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 407
BLAST of Lcy06g016470 vs. NCBI nr
Match:
XP_038903898.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038903899.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038903900.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida])
HSP 1 Score: 751.9 bits (1940), Expect = 2.9e-213
Identity = 377/414 (91.06%), Postives = 388/414 (93.72%), Query Frame = 0
Query: 3 SFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRKLR 62
S ESALSLS SRI FGPFNHFCQ RWRKPV NAQTRLEDRTRDLKLDKLATQ +K R
Sbjct: 6 SLESALSLSKPKISRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQFQKFR 65
Query: 63 IILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCC 122
IILKL ELMIDRKRGPFVSLQIMSRWRNIV L IGIGEFVHKYPHVFDVF HPVRRNLCC
Sbjct: 66 IILKLRELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVRRNLCC 125
Query: 123 RITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRE 182
RITGKM AL+KQEENVINDLE ETV+RLKKLLMMSVNGALHVHALRLISKELGLP+GF E
Sbjct: 126 RITGKMTALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLPDGFGE 185
Query: 183 SILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPT 242
SIL KYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEF+VKYAFPINFPT
Sbjct: 186 SILEKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFDVKYAFPINFPT 245
Query: 243 GFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKL 302
GFRIE GFREKLRNWQRL YA PYEKRQGFG RS GG+QRHEKRAVAVLHELLSLTVEKL
Sbjct: 246 GFRIEGGFREKLRNWQRLPYAKPYEKRQGFGFRSSGGMQRHEKRAVAVLHELLSLTVEKL 305
Query: 303 VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYM 362
VD+ERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAYAKGCL+EPNPIY+
Sbjct: 306 VDIERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLIEPNPIYI 365
Query: 363 VRRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
VRRKMQDLVLLGRRHTKQLESSM ENDSAAYNGDWLS+SEGSWVLPILQGFD
Sbjct: 366 VRRKMQDLVLLGRRHTKQLESSMEIKENDSAAYNGDWLSKSEGSWVLPILQGFD 419
BLAST of Lcy06g016470 vs. NCBI nr
Match:
XP_022937832.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata] >XP_022937840.1 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata])
HSP 1 Score: 739.2 bits (1907), Expect = 2.0e-209
Identity = 368/416 (88.46%), Postives = 388/416 (93.27%), Query Frame = 0
Query: 1 MKSFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRK 60
MK FESA SLSTT+FSR+RFGPFNHFCQ RW KP V AQTRLEDRTRDLKLDKLATQ+RK
Sbjct: 1 MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRK 60
Query: 61 LRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNL 120
LRII KL ELMIDRKRGPFVSLQIMSRWRN V L IGIG+FVHKYPHVFDVF HP+RRNL
Sbjct: 61 LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120
Query: 121 CCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGF 180
CCRITGKM AL+KQEENVIND E ETV+RLKKLLMMSVNG LH+HALRLISKELGLP+GF
Sbjct: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGF 180
Query: 181 RESILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINF 240
RESIL KYSDDFRLVDLEIVELV+KHEN AVAEVEQWREREFREKWLSEF+VK+AFPINF
Sbjct: 181 RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF 240
Query: 241 PTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVE 300
PTGF+I+ GFREKLRNWQRL YA PYEKRQGFGVRSCGG+ R EKRAVAVLHELLSLTVE
Sbjct: 241 PTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE 300
Query: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPI 360
KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAYAKGCLVEPNPI
Sbjct: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPI 360
Query: 361 YMVRRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
Y+VRRKMQDL+LLGRRHTKQLESSM E+ SAA NGDWLS+SEGSWVLPILQGFD
Sbjct: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416
BLAST of Lcy06g016470 vs. NCBI nr
Match:
KAG7027720.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 734.2 bits (1894), Expect = 6.3e-208
Identity = 365/416 (87.74%), Postives = 385/416 (92.55%), Query Frame = 0
Query: 1 MKSFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRK 60
MK FESA SLSTT+FSR+RFGPFNHFCQ RW KP V AQTRLEDRTRDLKLDKLATQ+RK
Sbjct: 1 MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRK 60
Query: 61 LRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNL 120
LR I KL ELMIDRKRGPFVSLQIMSRWRN V L IGIG+FVHKYPHVFDVF HP+RRNL
Sbjct: 61 LRTIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120
Query: 121 CCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGF 180
CCRITGKM AL+KQEENVIND E ETV+RLKKLLMMSVNG LH+HALRLISKELGLP+GF
Sbjct: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGF 180
Query: 181 RESILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINF 240
RESIL KYSDDFRLVDLEIVELV+KHEN AVAEVEQWREREFREKWLSEF+VK+AFPINF
Sbjct: 181 RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF 240
Query: 241 PTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVE 300
PTGF+I+ GFREKLRNWQRL Y PYEKRQGFGVRSCGG+ R EKRAVAVLHELLSLTVE
Sbjct: 241 PTGFKIKGGFREKLRNWQRLPYVKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE 300
Query: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPI 360
KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAY KGCLVEPNPI
Sbjct: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYTKGCLVEPNPI 360
Query: 361 YMVRRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
Y+VRRKMQDL+LLGRRHTKQLESSM E+ SAA NGDWLS+SEGSWVLPILQGFD
Sbjct: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416
BLAST of Lcy06g016470 vs. NCBI nr
Match:
XP_023539959.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 734.2 bits (1894), Expect = 6.3e-208
Identity = 366/416 (87.98%), Postives = 387/416 (93.03%), Query Frame = 0
Query: 1 MKSFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRK 60
MK FESA SLSTT+FSR+RFGPFNHFCQ RW KP V AQTRL+DRTRDLKLDKLATQ+RK
Sbjct: 1 MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLQDRTRDLKLDKLATQIRK 60
Query: 61 LRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNL 120
LRII KL ELMIDRKRGPFVSLQIMSRWRN V L IGIG+FVHKYPHVFDVF HP+RRNL
Sbjct: 61 LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120
Query: 121 CCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGF 180
CCRITGKM AL+KQEENVIND E ETV+RLKKLLMMSVNG LH+HALRLISKELGLP+GF
Sbjct: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGF 180
Query: 181 RESILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINF 240
RESIL KYSDDFRLVDLEIVELV KHEN +VAEVEQWREREFREKWLSEF+VK+AFPINF
Sbjct: 181 RESILGKYSDDFRLVDLEIVELVGKHENVSVAEVEQWREREFREKWLSEFDVKFAFPINF 240
Query: 241 PTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVE 300
PTGF+I+ GFREKLRNWQRL YA PYEKRQGFGVRSCGG+ RHEKRAVAVLHELLSLTVE
Sbjct: 241 PTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVE 300
Query: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPI 360
KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAYAKG LVEPNPI
Sbjct: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGFLVEPNPI 360
Query: 361 YMVRRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
Y+VRRKMQDL+LLGRRHTKQLESSM E+ SAA NGDWLS+SEGSWVLPILQGFD
Sbjct: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHVSAADNGDWLSKSEGSWVLPILQGFD 416
BLAST of Lcy06g016470 vs. NCBI nr
Match:
XP_022971448.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita maxima])
HSP 1 Score: 729.9 bits (1883), Expect = 1.2e-206
Identity = 364/416 (87.50%), Postives = 385/416 (92.55%), Query Frame = 0
Query: 1 MKSFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRK 60
MK FESA SLSTT+FSR+RFGPFNHFCQ RW KP V AQTRLEDR RDLKLD LATQ+RK
Sbjct: 1 MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRK 60
Query: 61 LRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNL 120
LRII KL ELMIDRKRGPFVSLQIMSRWRN V L IGIG+FVHKYPHVFDVF HP+RRNL
Sbjct: 61 LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120
Query: 121 CCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGF 180
CCRITGKM AL+KQEENVIND E ETV+RLKKLLMMS NG LH+HALRLISKELGLP+GF
Sbjct: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGF 180
Query: 181 RESILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINF 240
RESIL KYSDDFRLVDLEIVELV+KHEN AVAEVEQWREREFREKWLSEF+VK+AFPINF
Sbjct: 181 RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF 240
Query: 241 PTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVE 300
PTG++I+ GFREKLRNWQRL YA PYEKRQGFGVRSCGG+ RHEKRAVAVLHELLSLTVE
Sbjct: 241 PTGYKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVE 300
Query: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPI 360
KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAYAKGCLVEPNPI
Sbjct: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPI 360
Query: 361 YMVRRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
Y+VRRKMQDL+LLGRRHTKQLESSM E+ SAA NGD LS+SEGSWVLPILQGFD
Sbjct: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 416
BLAST of Lcy06g016470 vs. TAIR 10
Match:
AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 482.3 bits (1240), Expect = 4.0e-136
Identity = 237/398 (59.55%), Postives = 307/398 (77.14%), Query Frame = 0
Query: 22 PFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRKLRIILKLHELMIDRKRGPFVS 81
P + Q RW KPV +AQTRLE+RTRD +LDK+ Q+RKL IIL++ +LM +KRGPFVS
Sbjct: 45 PLYFYNQRRWLKPVDSAQTRLENRTRDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVS 104
Query: 82 LQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVIND 141
LQ+MSRW+N+V LN+ +G F+ KYPH F++F+HP +NLCC+IT K LI +EENV+ +
Sbjct: 105 LQLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRE 164
Query: 142 LETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLVDLEIVE 201
E + V+R+KKLL++S +G L VHALRLI KELGLP FR+SILAKYS +FRLVDLE +E
Sbjct: 165 CEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLETLE 224
Query: 202 LVEK-HENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTGFRIEAGFREKLRNWQRL 261
LV++ E+ VA+VE+WRE E+REKWLS+F YAFPI+ PTGF+IE GFRE+L+NWQR+
Sbjct: 225 LVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRV 284
Query: 262 SYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVN 321
Y PY++++ G++R EKR VAV+HELLSLTVEK+V+VERL HFR+D IEVN
Sbjct: 285 PYVKPYDRKE-----ISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVN 344
Query: 322 IRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGRRHTKQ 381
+RE++LKHPGIFY+STKG++Q +FLREAY+KGCL+EPNPIY VRRKM DLVLL R+++
Sbjct: 345 VREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRYSRM 404
Query: 382 L-----ESSMENDS----AAYNGDWLSQSEGSWVLPIL 410
L E+ E S + N DW +G WVLPIL
Sbjct: 405 LLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLPIL 437
BLAST of Lcy06g016470 vs. TAIR 10
Match:
AT5G45790.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 412.9 bits (1060), Expect = 3.0e-115
Identity = 200/341 (58.65%), Postives = 262/341 (76.83%), Query Frame = 0
Query: 79 FVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENV 138
F + ++MSRW+N+V LN+ +G F+ KYPH F++F+HP +NLCC+IT K LI +EENV
Sbjct: 17 FSTNKLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENV 76
Query: 139 INDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLVDLE 198
+ + E + V+R+KKLL++S +G L VHALRLI KELGLP FR+SILAKYS +FRLVDLE
Sbjct: 77 VRECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLE 136
Query: 199 IVELVEK-HENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTGFRIEAGFREKLRNW 258
+ELV++ E+ VA+VE+WRE E+REKWLS+F YAFPI+ PTGF+IE GFRE+L+NW
Sbjct: 137 TLELVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNW 196
Query: 259 QRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAI 318
QR+ Y PY++++ G++R EKR VAV+HELLSLTVEK+V+VERL HFR+D I
Sbjct: 197 QRVPYVKPYDRKE-----ISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGI 256
Query: 319 EVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGRRH 378
EVN+RE++LKHPGIFY+STKG++Q +FLREAY+KGCL+EPNPIY VRRKM DLVLL R+
Sbjct: 257 EVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRY 316
Query: 379 TKQL-----ESSMENDS----AAYNGDWLSQSEGSWVLPIL 410
++ L E+ E S + N DW +G WVLPIL
Sbjct: 317 SRMLLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLPIL 352
BLAST of Lcy06g016470 vs. TAIR 10
Match:
AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 253.4 bits (646), Expect = 3.0e-67
Identity = 142/359 (39.55%), Postives = 210/359 (58.50%), Query Frame = 0
Query: 33 KPVVNAQT--RLEDRTRDLKLDKLATQLRKLRIILKLHELMIDRKRGPFV--SLQIMSRW 92
KP + T + +DR RD D +K+R ++K H L++ + L ++R
Sbjct: 32 KPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARR 91
Query: 93 RNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVINDLETETVR 152
+ G F+ K+PHVF+++ HPV+R L CR+T K + I+ E + D + V
Sbjct: 92 LGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVT 151
Query: 153 RLKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLVDLE-----IVELV 212
RL+KL+MMS G + + +R+ E GLP F S++ K+ FRL+D E +E+V
Sbjct: 152 RLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIV 211
Query: 213 EKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTGFRIEAGFREKLRNWQRLSYA 272
EK N ++ +E+ RE E+R K + +V+++F +NFP GF+I FR + WQRL Y
Sbjct: 212 EKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYW 271
Query: 273 MPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRE 332
PYE G+ +RS R EKR+VA +HELLSLTVEK + +ER+ HFR + ++E
Sbjct: 272 SPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKE 331
Query: 333 LLLKHPGIFYISTKGN---TQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGRRHTK 380
LL+H GIFYIST+GN VFLRE Y +G LVEPN +Y+ RR++ +LVL+ R K
Sbjct: 332 FLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390
BLAST of Lcy06g016470 vs. TAIR 10
Match:
AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 240.7 bits (613), Expect = 2.0e-63
Identity = 136/342 (39.77%), Postives = 208/342 (60.82%), Query Frame = 0
Query: 45 RTRDLKLDKLATQLRKLRIILKLHELMIDRKRG--PFVSLQIMSRWRNIVALNIGIGEFV 104
R+RD +KL + + L ++ + +L + P +S++ +SR + LN G F+
Sbjct: 34 RSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLSQKLHLNRGAASFL 93
Query: 105 HKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGAL 164
KYPH+F V PV+ CR+T + + +QE I + V RL +LL MS++ ++
Sbjct: 94 RKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRLVRLLSMSISKSI 153
Query: 165 HVHALRLISKELGLPNGFRESILAKYSDDFRLVD-----LEIVELVEKHENGA--VAEVE 224
+ A+ + +ELGLP+ F +S+++K F+L D I+ELV++ E A VE
Sbjct: 154 PLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQEEEKRLEFEAAVE 213
Query: 225 QWREREFREKWLS--EFNVKYAFPINFPTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFG 284
+WR E ++ S ++++F ++P G R+ F+ K++ WQRL Y PYE G
Sbjct: 214 KWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLPYVGPYEDMVG-K 273
Query: 285 VRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFY 344
+S G+ EKRAVA+ HE L+LTVEK+V+VE++ HFR+ F I++NIR+L L HPG+FY
Sbjct: 274 KKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNIRDLFLDHPGMFY 333
Query: 345 ISTKGNTQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGR 376
+STKG VFLREAY +G L++PNP+Y RRK+ DLVLLGR
Sbjct: 334 VSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGR 374
BLAST of Lcy06g016470 vs. TAIR 10
Match:
AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 149.4 bits (376), Expect = 6.2e-36
Identity = 111/390 (28.46%), Postives = 192/390 (49.23%), Query Frame = 0
Query: 3 SFESALSLSTTNFSRIRF--------GPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKL 62
S +S L +ST +R +F + + +R + VV R ++L D +
Sbjct: 28 SVKSGLPMSTIRAARSQFMGEGLILGNKYGFWSTSRKTRVVVEPVRAAVKRRKELTFDSV 87
Query: 63 ATQLRKLRIILKLHELMIDRKRGPFVSLQIMSRWRNIVAL--NIGIGEFVHKYPHVFDVF 122
+ +KL+++L + ++++ + +SL+ + ++R + L + KYP VF++
Sbjct: 88 VQRDKKLKLVLNIRKILVSQP-DRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEIV 147
Query: 123 SHPVRRNLCCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISK 182
+L ++T + L E + N+LE V +L+KL+MMS++ + + + +
Sbjct: 148 EEGA-YSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHLKT 207
Query: 183 ELGLPNGFRESILAKYSDDFRLVDL---EIVELVEKHENGAVAEVE----QWREREFREK 242
+LGLP FR++I +Y FR+V +EL AV+ E R RE E+
Sbjct: 208 DLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAELSEDDNRTRESEER 267
Query: 243 WLSEFNVKYAFPINFPTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEK 302
L + P G + K+ ++ + Y PY + F G +++ EK
Sbjct: 268 NLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPY---KDFSHLRSGTLEK-EK 327
Query: 303 RAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFL 362
A V+HELLSLT EK V+ L HFR +F +R +L++HP +FY+S KG VFL
Sbjct: 328 HACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFL 387
Query: 363 REAYAKGCLVEPNPIYMVRRKMQDLVLLGR 376
REAY L++ +P+ +V+ KM+ LV + R
Sbjct: 388 REAYRNSELIDKDPLTLVKEKMRALVSVPR 411
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q689D6 | 4.3e-66 | 39.55 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... | [more] |
Q65XL5 | 2.3e-35 | 30.37 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... | [more] |
A0MFS5 | 8.7e-35 | 28.46 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... | [more] |
B6TTV8 | 8.7e-35 | 31.49 | Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... | [more] |
Q9ZUZ6 | 3.2e-21 | 26.82 | Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FCB5 | 9.5e-210 | 88.46 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=... | [more] |
A0A6J1I6W3 | 5.7e-207 | 87.50 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO... | [more] |
A0A0A0LFE1 | 9.8e-207 | 87.17 | PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816690 PE=4 S... | [more] |
A0A1S3B7J9 | 1.1e-205 | 87.41 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103486860 PE=4... | [more] |
A0A6J1FCD7 | 2.9e-203 | 88.78 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=... | [more] |
Match Name | E-value | Identity | Description | |
XP_038903898.1 | 2.9e-213 | 91.06 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038903899.1 protein ... | [more] |
XP_022937832.1 | 2.0e-209 | 88.46 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata] >XP_02293784... | [more] |
KAG7027720.1 | 6.3e-208 | 87.74 | Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy... | [more] |
XP_023539959.1 | 6.3e-208 | 87.98 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo] | [more] |
XP_022971448.1 | 1.2e-206 | 87.50 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
AT5G45790.2 | 4.0e-136 | 59.55 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT5G45790.1 | 3.0e-115 | 58.65 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT4G33495.1 | 3.0e-67 | 39.55 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT1G06440.1 | 2.0e-63 | 39.77 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT4G01037.1 | 6.2e-36 | 28.46 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |