Lcy06g016470 (gene) Sponge gourd (P93075) v1

Overview
NameLcy06g016470
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
LocationChr06: 37783382 .. 37787627 (+)
RNA-Seq ExpressionLcy06g016470
SyntenyLcy06g016470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAATAATTTCCATTACACAAAACAGTTCAAAGTACAGTTTCCATCACAATAGTTCAAAATATTTTCCATTACAATTCATTTCTACAATGTCATTTATATTTTCTAGTCAATCTTAAACAAACATACATTGAATTCCACTAATATAACAATAATTATCGAATATACCTTCGTAGAGCATCGCAACACCTTCATCTCTTTCTTCAATCTCCAAACTTTGTCTCTCAAGTCATTTATAACATCTTTTTCATGTTGATCTACTGCAGGGTCAAACCAAGAAAAAAAAATCTACCTCCAAATCCTCTACCCTGTAGTTAAAGAAAGAAGAATCTATAAGGACAATTTTGAGGTATATATCCACCAATTTCAATAGAGTACTCACCTTATACGAAGCACAACCCCAAAGTCGACACCCTGGGTTTGGTTTCATCCATGACATTTTTCAGATGAGTTTGTAAGCCACAATAGCATAACTTCTCATTTCTATTCGACATACTACTACTTATCAATTATGAATGCTCATCCGTGACCTCCATGAGGTTTATTGACAGTTTCTTTGTATTGACGATGTTATTTTGGTTGAAGAGCTCCCATTGTTTCTGGGTGCCCTAGCTATGTGTCGAAGAAAGGGAAATGGGTGAAAGAAATCAAGCCCAACACCGTGTTGAAGAAAAACAGGAGAGGAAGGAAATTTAGGGTTTTCCATTTAGTTAAAATCGAAATTAAATATATATATATATATTTAAATTGTAGTTAAGCACCAGCTCAAAAATATATTGGCCAGTTAGGGTGTCATCAGTCACCAAGTCAGCTGCCCAATCAGTGCCACCGTTAGTCATTAGACAGTAACGTTAAGTCAGGGACTCAATAGACCTATTTCATAAACCTTAGGAACTTGATTGTCCAATTTTGAAACCTAGGAACTCAATAGACACTTTTACTCTTTTTTTTTTTTAATTTATTTATAAATAGGCATAAATGAAATGTTTGGACATGGATTAAATTGAAAAGCCAAAATTTTAAACCATAATATATATATGTTAGTAGGTTATGGGGATTTGAACCTCCAAGCTTAAGGGAACGAGTACATGCCAATTAAAAGCTACGCTCATTGGTTGCAATTGGTGAACTCAAAATAATAGTAATAATAGAACATTTGCAAAGCTTGGCTTCTTTGAAATTGATTTGAAAGTGAGTTGTTATGCGGTTCTTCCACAATGGAGTAACAATTGCACCCCGCTTCTTGCTTTTTTTAATTTTCACTCCTACAATGTCCTGTTCGTTATTCACTTACCCTAACATTCTGTTTTTCAAGTTCTAGGTGAGCACAATACATATGCAATTTCATTGCTGCAACTAATCAATGAGGTATGAAATCATTTGAATCCGCATTGTCTCTTTCAACAACTAATTTTTCCAGAATTCGATTCGGTCCTTTCAATCATTTCTGTCAAACGAGATGGAGAAAGCCTGTGGTGAACGCTCAAACACGATTAGAAGACAGAACAAGGGACCTCAAGCTCGACAAACTCGCAACCCAACTCAGAAAACTCAGGATCATCCTCAAACTCCACGAGCTCATGATTGATCGGAAACGCGGCCCTTTTGTCTCCTTACAAATCATGTCTCGATGGCGGAATATTGTTGCACTCAACATCGGAATTGGGGAGTTTGTTCATAAGTACCCCCATGTGTTCGATGTATTTTCCCATCCCGTAAGGAGAAATTTATGCTGTAGAATCACAGGAAAGATGATCGCCTTGATCAAACAAGAAGAGAATGTAATCAACGATCTCGAAACTGAGACTGTCCGGCGATTGAAGAAGTTGCTAATGATGTCTGTGAATGGTGCTCTCCATGTTCATGCTTTGAGGCTAATCAGCAAGGAATTGGGCTTGCCCAATGGGTTTAGAGAATCGATTCTGGCAAAATATTCGGATGATTTCCGATTGGTTGATTTGGAGATTGTTGAATTGGTTGAGAAACATGAGAATGGAGCTGTAGCTGAGGTTGAACAATGGAGGGAGAGAGAGTTCAGAGAGAAATGGCTGAGCGAATTTAATGTGAAATATGCATTTCCCATCAATTTCCCAACTGGGTTTAGAATAGAGGCAGGTTTTAGAGAGAAGCTGAGGAATTGGCAGAGGCTTTCATATGCAATGCCATATGAGAAGAGACAGGGGTTTGGTGTTCGTTCTTGTGGGGGGATACAGCGCCATGAGAAGCGAGCTGTGGCTGTTCTTCATGAGCTTTTGAGCTTGACTGTGGAAAAGCTGGTTGATGTTGAGCGACTTGTCCATTTTAGGCGAGATTTTGCCATTGAAGTCAATATCCGTGAGCTTCTACTGAAGCACCCAGGGATATTCTACATATCAACCAAGGGGAACACTCAGGTAGTCTTCCTTAGAGAGGCTTATGCAAAAGGGTGCTTGGTAGAGCCCAATCCAATATACATGGTTAGAAGGAAGATGCAGGACCTTGTTCTGTTGGGTCGTAGACACACCAAGCAGTTGGAATCATCCATGGAAAATGACAGTGCAGCCTATAATGGGGACTGGTTATCTCAAAGTGAAGGAAGCTGGGTTTTGCCGATATTGCAGGGCTTTGATTGAGGGATGAAGTTCAAATGTCTGGTAAAGTTGATGGTTTGTTCATTTTTGGGGGGTGAAGGTGGAACTTTGTTCATAGTGAAATCTAGTTGATTATCTGATGATGTTTGAATGTGTCTTCACCCACTCAAAAGGGGCAAAGGTACTGGCCTCTTAAGGTTATTCTTTCAAACTCCCATTGTTTATTTTTGAAAATCTGTTTAGGAATGAGTTTGAAATAAATTCTGAAGATTTGAAAATTGTGCTTTTAAAGGAAACACATTTTTTTATAAGCATCTCAAGGATAAGTACTAATTAACTGTTTCCTTCAAAACCATATATTATTGGTAAACTAAACACACTTTTTACTATTTTAAACATGATATCAAACTTACCTTAAATCATTATTTTTGTTTAGTGATAAAAGCAATTATTTTTTATATTATTATTATTTTTTTTTTGAGAGGAAACATAGAATTTCATTCACAAAAGGCACAGCCAAAACAACAGCCTATGGATAGAGGGATAAGGCATCCCTCCTCCAAAAGAAGCTACAAAAGAGGCATATTTCTCTACATCCTTCATACTTTGTTCCATTCTGTAAAGGAAGTTGGATGTTATGTGATTAGGAAAATAATTAGAGATCCTTCTATTCTTGAGTGAAGAGTACAAGAGGACTCCAATACTTACATTACATATACAGTAATTTGATTGTTGGATAGTGCTGGGTGTTCTTGGAAATTAATTAATGACGAGTTTAATATTTTTCTCTTCTATTGGGGGTTCTGAATGATTTCACTTTGAATGTAGAGAAGATGTGAACTATTAGAATATCGTATTTTCAGTCTTATTCTCAGTGAACTTATTGGTTAATCATCTTTCAGTTTCTTTCTTCCATGCCTAAAGATTTTCATTCTGCTATGTGGAAATCGTCCCAGAAAAGTGAATGTGCTTATGTGGATATTGCTAAATAACGGGGCGAATACAGCTGAAGTTATACAAAAGAAGCTGCCGTCTTTTGCTATATGCAGCCCTCTGTTTGTGTTCTAATATTTTAGGGATTCTGAAGACCAAAATCATCTCTTCTTTAAATGTTCATATGAATTGAAATTGAATTGTTGGCATCTCATCTTCCAACAATTCAAGATTCAATGGCTCTTCTTAAATGATTTTGGAATTGGCATTTCTCAACTTCTTGGCGGTCTGGTTGGTTTCATACCGAAGGCATGGTTGCTTTGGGTTAATGCCACTAATGCAATTATCTCTGAAGTATGGTTCTTGCTCAATTAAAGGATCCTTGAAGACAAGTTCAAACCTTGGAACAAGCAGTTGGTATTCAAACTGAAGACCCCTCCATTGGTATTCTTTTTCTAAGATTTTTGTTAATTATTTTACTACTGATATTTGTCACTATTGGGAAGCTTTTGTTTTTGCAAACTAGGCTCTTTTTAACTTTCACTCCCTTTGAGTTAGTTTGTTTTCTGGAACATTTATGGTATCTTTTGATTCTTTTCATTATTTCAATGAAATGTTTCTTTCTGGTTAAAAAAAAATGGCACATCATTTTGTAGTTATGTGTAGAACAATTGTATTAATTTTTGGGTAAAATACTCAAAATGCTTCTATACTTTGAAGTTTTCAATTATACTTCTATCGTTT

mRNA sequence

CAAAATAATTTCCATTACACAAAACAGTTCAAAGTACAGTTTCCATCACAATAGTTCAAAATATTTTCCATTACAATTCATTTCTACAATGTCATTTATATTTTCTAGTCAATCTTAAACAAACATACATTGAATTCCACTAATATAACAATAATTATCGAATATACCTTCGTAGAGCATCGCAACACCTTCATCTCTTTCTTCAATCTCCAAACTTTGTCTCTCAAGTCATTTATAACATCTTTTTCATGTTGATCTACTGCAGGGTCAAACCAAGAAAAAAAAATCTACCTCCAAATCCTCTACCCTGTAGTTAAAGAAAGAAGAATCTATAAGGACAATTTTGAGGTATATATCCACCAATTTCAATAGAGTACTCACCTTATACGAAGCACAACCCCAAAGTCGACACCCTGGGTTTGGTTTCATCCATGACATTTTTCAGATGAGTTTGTAAGCCACAATAGCATAACTTCTCATTTCTATTCGACATACTACTACTTATCAATTATGAATGCTCATCCGTGACCTCCATGAGGTTTATTGACAGTTTCTTTGTATTGACGATGTTATTTTGGTTGAAGAGCTCCCATTGTTTCTGGGTGCCCTAGCTATGTGTCGAAGAAAGGGAAATGGGTGAAAGAAATCAAGCCCAACACCGTGTTGAAGAAAAACAGGAGAGGAAGGAAATTTAGGGTTTTCCATTTAGTTAAAATCGAAATTAAATATATATATATATATTTAAATTGTAGTTAAGCACCAGCTCAAAAATATATTGGCCAGTTAGGGTGTCATCAGTCACCAAGTCAGCTGCCCAATCAGTGCCACCGTTAGTCATTAGACAGTAACGTTAAGTCAGGGACTCAATAGACCTATTTCATAAACCTTAGGAACTTGATTGTCCAATTTTGAAACCTAGGAACTCAATAGACACTTTTACTCTTTTTTTTTTTTAATTTATTTATAAATAGGCATAAATGAAATGTTTGGACATGGATTAAATTGAAAAGCCAAAATTTTAAACCATAATATATATATGTTAGTAGGTTATGGGGATTTGAACCTCCAAGCTTAAGGGAACGAGTACATGCCAATTAAAAGCTACGCTCATTGGTTGCAATTGGTGAACTCAAAATAATAGTAATAATAGAACATTTGCAAAGCTTGGCTTCTTTGAAATTGATTTGAAAGTGAGTTGTTATGCGGTTCTTCCACAATGGAGTAACAATTGCACCCCGCTTCTTGCTTTTTTTAATTTTCACTCCTACAATGTCCTGTTCGTTATTCACTTACCCTAACATTCTGTTTTTCAAGTTCTAGGTGAGCACAATACATATGCAATTTCATTGCTGCAACTAATCAATGAGGTATGAAATCATTTGAATCCGCATTGTCTCTTTCAACAACTAATTTTTCCAGAATTCGATTCGGTCCTTTCAATCATTTCTGTCAAACGAGATGGAGAAAGCCTGTGGTGAACGCTCAAACACGATTAGAAGACAGAACAAGGGACCTCAAGCTCGACAAACTCGCAACCCAACTCAGAAAACTCAGGATCATCCTCAAACTCCACGAGCTCATGATTGATCGGAAACGCGGCCCTTTTGTCTCCTTACAAATCATGTCTCGATGGCGGAATATTGTTGCACTCAACATCGGAATTGGGGAGTTTGTTCATAAGTACCCCCATGTGTTCGATGTATTTTCCCATCCCGTAAGGAGAAATTTATGCTGTAGAATCACAGGAAAGATGATCGCCTTGATCAAACAAGAAGAGAATGTAATCAACGATCTCGAAACTGAGACTGTCCGGCGATTGAAGAAGTTGCTAATGATGTCTGTGAATGGTGCTCTCCATGTTCATGCTTTGAGGCTAATCAGCAAGGAATTGGGCTTGCCCAATGGGTTTAGAGAATCGATTCTGGCAAAATATTCGGATGATTTCCGATTGGTTGATTTGGAGATTGTTGAATTGGTTGAGAAACATGAGAATGGAGCTGTAGCTGAGGTTGAACAATGGAGGGAGAGAGAGTTCAGAGAGAAATGGCTGAGCGAATTTAATGTGAAATATGCATTTCCCATCAATTTCCCAACTGGGTTTAGAATAGAGGCAGGTTTTAGAGAGAAGCTGAGGAATTGGCAGAGGCTTTCATATGCAATGCCATATGAGAAGAGACAGGGGTTTGGTGTTCGTTCTTGTGGGGGGATACAGCGCCATGAGAAGCGAGCTGTGGCTGTTCTTCATGAGCTTTTGAGCTTGACTGTGGAAAAGCTGGTTGATGTTGAGCGACTTGTCCATTTTAGGCGAGATTTTGCCATTGAAGTCAATATCCGTGAGCTTCTACTGAAGCACCCAGGGATATTCTACATATCAACCAAGGGGAACACTCAGGTAGTCTTCCTTAGAGAGGCTTATGCAAAAGGGTGCTTGGTAGAGCCCAATCCAATATACATGGTTAGAAGGAAGATGCAGGACCTTGTTCTGTTGGGTCGTAGACACACCAAGCAGTTGGAATCATCCATGGAAAATGACAGTGCAGCCTATAATGGGGACTGGTTATCTCAAAGTGAAGGAAGCTGGGTTTTGCCGATATTGCAGGGCTTTGATTGAGGGATGAAGTTCAAATGTCTGGTAAAGTTGATGGTTTGTTCATTTTTGGGGGGTGAAGGTGGAACTTTGTTCATAGTGAAATCTAGTTGATTATCTGATGATGTTTGAATGTGTCTTCACCCACTCAAAAGGGGCAAAGGTACTGGCCTCTTAAGGTTATTCTTTCAAACTCCCATTGTTTATTTTTGAAAATCTGTTTAGGAATGAGTTTGAAATAAATTCTGAAGATTTGAAAATTGTGCTTTTAAAGGAAACACATTTTTTTATAAGCATCTCAAGGATAAGTACTAATTAACTGTTTCCTTCAAAACCATATATTATTGGTAAACTAAACACACTTTTTACTATTTTAAACATGATATCAAACTTACCTTAAATCATTATTTTTGTTTAGTGATAAAAGCAATTATTTTTTATATTATTATTATTTTTTTTTTGAGAGGAAACATAGAATTTCATTCACAAAAGGCACAGCCAAAACAACAGCCTATGGATAGAGGGATAAGGCATCCCTCCTCCAAAAGAAGCTACAAAAGAGGCATATTTCTCTACATCCTTCATACTTTGTTCCATTCTGTAAAGGAAGTTGGATGTTATGTGATTAGGAAAATAATTAGAGATCCTTCTATTCTTGAGTGAAGAGTACAAGAGGACTCCAATACTTACATTACATATACAGTAATTTGATTGTTGGATAGTGCTGGGTGTTCTTGGAAATTAATTAATGACGAGTTTAATATTTTTCTCTTCTATTGGGGGTTCTGAATGATTTCACTTTGAATGTAGAGAAGATGTGAACTATTAGAATATCGTATTTTCAGTCTTATTCTCAGTGAACTTATTGGTTAATCATCTTTCAGTTTCTTTCTTCCATGCCTAAAGATTTTCATTCTGCTATGTGGAAATCGTCCCAGAAAAGTGAATGTGCTTATGTGGATATTGCTAAATAACGGGGCGAATACAGCTGAAGTTATACAAAAGAAGCTGCCGTCTTTTGCTATATGCAGCCCTCTGTTTGTGTTCTAATATTTTAGGGATTCTGAAGACCAAAATCATCTCTTCTTTAAATGTTCATATGAATTGAAATTGAATTGTTGGCATCTCATCTTCCAACAATTCAAGATTCAATGGCTCTTCTTAAATGATTTTGGAATTGGCATTTCTCAACTTCTTGGCGGTCTGGTTGGTTTCATACCGAAGGCATGGTTGCTTTGGGTTAATGCCACTAATGCAATTATCTCTGAAGTATGGTTCTTGCTCAATTAAAGGATCCTTGAAGACAAGTTCAAACCTTGGAACAAGCAGTTGGTATTCAAACTGAAGACCCCTCCATTGGTATTCTTTTTCTAAGATTTTTGTTAATTATTTTACTACTGATATTTGTCACTATTGGGAAGCTTTTGTTTTTGCAAACTAGGCTCTTTTTAACTTTCACTCCCTTTGAGTTAGTTTGTTTTCTGGAACATTTATGGTATCTTTTGATTCTTTTCATTATTTCAATGAAATGTTTCTTTCTGGTTAAAAAAAAATGGCACATCATTTTGTAGTTATGTGTAGAACAATTGTATTAATTTTTGGGTAAAATACTCAAAATGCTTCTATACTTTGAAGTTTTCAATTATACTTCTATCGTTT

Coding sequence (CDS)

ATGAAATCATTTGAATCCGCATTGTCTCTTTCAACAACTAATTTTTCCAGAATTCGATTCGGTCCTTTCAATCATTTCTGTCAAACGAGATGGAGAAAGCCTGTGGTGAACGCTCAAACACGATTAGAAGACAGAACAAGGGACCTCAAGCTCGACAAACTCGCAACCCAACTCAGAAAACTCAGGATCATCCTCAAACTCCACGAGCTCATGATTGATCGGAAACGCGGCCCTTTTGTCTCCTTACAAATCATGTCTCGATGGCGGAATATTGTTGCACTCAACATCGGAATTGGGGAGTTTGTTCATAAGTACCCCCATGTGTTCGATGTATTTTCCCATCCCGTAAGGAGAAATTTATGCTGTAGAATCACAGGAAAGATGATCGCCTTGATCAAACAAGAAGAGAATGTAATCAACGATCTCGAAACTGAGACTGTCCGGCGATTGAAGAAGTTGCTAATGATGTCTGTGAATGGTGCTCTCCATGTTCATGCTTTGAGGCTAATCAGCAAGGAATTGGGCTTGCCCAATGGGTTTAGAGAATCGATTCTGGCAAAATATTCGGATGATTTCCGATTGGTTGATTTGGAGATTGTTGAATTGGTTGAGAAACATGAGAATGGAGCTGTAGCTGAGGTTGAACAATGGAGGGAGAGAGAGTTCAGAGAGAAATGGCTGAGCGAATTTAATGTGAAATATGCATTTCCCATCAATTTCCCAACTGGGTTTAGAATAGAGGCAGGTTTTAGAGAGAAGCTGAGGAATTGGCAGAGGCTTTCATATGCAATGCCATATGAGAAGAGACAGGGGTTTGGTGTTCGTTCTTGTGGGGGGATACAGCGCCATGAGAAGCGAGCTGTGGCTGTTCTTCATGAGCTTTTGAGCTTGACTGTGGAAAAGCTGGTTGATGTTGAGCGACTTGTCCATTTTAGGCGAGATTTTGCCATTGAAGTCAATATCCGTGAGCTTCTACTGAAGCACCCAGGGATATTCTACATATCAACCAAGGGGAACACTCAGGTAGTCTTCCTTAGAGAGGCTTATGCAAAAGGGTGCTTGGTAGAGCCCAATCCAATATACATGGTTAGAAGGAAGATGCAGGACCTTGTTCTGTTGGGTCGTAGACACACCAAGCAGTTGGAATCATCCATGGAAAATGACAGTGCAGCCTATAATGGGGACTGGTTATCTCAAAGTGAAGGAAGCTGGGTTTTGCCGATATTGCAGGGCTTTGATTGA

Protein sequence

MKSFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRKLRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGRRHTKQLESSMENDSAAYNGDWLSQSEGSWVLPILQGFD
Homology
BLAST of Lcy06g016470 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 4.3e-66
Identity = 142/359 (39.55%), Postives = 210/359 (58.50%), Query Frame = 0

Query: 33  KPVVNAQT--RLEDRTRDLKLDKLATQLRKLRIILKLHELMIDRKRGPFV--SLQIMSRW 92
           KP   + T  + +DR RD   D      +K+R ++K H L++ +         L  ++R 
Sbjct: 32  KPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARR 91

Query: 93  RNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVINDLETETVR 152
             +       G F+ K+PHVF+++ HPV+R L CR+T K +  I+ E   + D   + V 
Sbjct: 92  LGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVT 151

Query: 153 RLKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLVDLE-----IVELV 212
           RL+KL+MMS  G + +  +R+   E GLP  F  S++ K+   FRL+D E      +E+V
Sbjct: 152 RLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIV 211

Query: 213 EKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTGFRIEAGFREKLRNWQRLSYA 272
           EK  N ++  +E+ RE E+R K +   +V+++F +NFP GF+I   FR  +  WQRL Y 
Sbjct: 212 EKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYW 271

Query: 273 MPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRE 332
            PYE   G+ +RS     R EKR+VA +HELLSLTVEK + +ER+ HFR    +   ++E
Sbjct: 272 SPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKE 331

Query: 333 LLLKHPGIFYISTKGN---TQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGRRHTK 380
            LL+H GIFYIST+GN      VFLRE Y +G LVEPN +Y+ RR++ +LVL+  R  K
Sbjct: 332 FLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390

BLAST of Lcy06g016470 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.3e-35
Identity = 116/382 (30.37%), Postives = 200/382 (52.36%), Query Frame = 0

Query: 32  RKPVVNAQTRLEDRTRDLKLDKLATQLRKLRIILKLHELMIDRKRGPFVSLQIMSRWRNI 91
           R+  V AQ  ++ R +++  D +  + +KL+++LKL  +++       +SL+ + R+R  
Sbjct: 51  RRLAVVAQAAVK-RRKEIPFDNVIQRDKKLKLVLKLRNILVSNP-DRVMSLRDLGRFRRD 110

Query: 92  VAL--NIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVINDLETETVRR 151
           + L     +   + ++P VF+V    V  +L  R+T     L   E ++ N+ E   V +
Sbjct: 111 LGLTRKRRLIALLKRFPGVFEVVEEGV-YSLRFRLTPAAERLYLDELHLKNESEGLAVTK 170

Query: 152 LKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLVDLEI---VELVEKH 211
           L+KLLMMS +  + +  +  +  +LGLP  FR++I  +Y   FR+V ++    +EL    
Sbjct: 171 LRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWD 230

Query: 212 ENGAVAEVEQWREREFREKWLSEFNVKYAFPINF-----PTGFRIEAGFREKLRNWQRLS 271
              AV+  E   E E R +   E N+    P+ F     P G ++  G   ++  ++ + 
Sbjct: 231 PELAVSAAEV-AEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMP 290

Query: 272 YAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNI 331
           Y  PY     F     G  ++ EK A  V+HE+LSLT+EK   V+ L HFR +F    ++
Sbjct: 291 YISPY---SDFSHLRSGSAEK-EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSL 350

Query: 332 RELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGRRHTKQL 391
           R +L++HP +FY+S KG+   VFLREAY    LVE + + +++ KM+ LV + R   + +
Sbjct: 351 RGMLIRHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGV 410

Query: 392 ESSMENDSAAYNGDWLSQSEGS 404
            ++ E ++   NG     SEGS
Sbjct: 411 PATSE-EADRTNGAAQMLSEGS 423

BLAST of Lcy06g016470 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 8.7e-35
Identity = 111/390 (28.46%), Postives = 192/390 (49.23%), Query Frame = 0

Query: 3   SFESALSLSTTNFSRIRF--------GPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKL 62
           S +S L +ST   +R +F          +  +  +R  + VV        R ++L  D +
Sbjct: 28  SVKSGLPMSTIRAARSQFMGEGLILGNKYGFWSTSRKTRVVVEPVRAAVKRRKELTFDSV 87

Query: 63  ATQLRKLRIILKLHELMIDRKRGPFVSLQIMSRWRNIVAL--NIGIGEFVHKYPHVFDVF 122
             + +KL+++L + ++++ +     +SL+ + ++R  + L         + KYP VF++ 
Sbjct: 88  VQRDKKLKLVLNIRKILVSQP-DRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEIV 147

Query: 123 SHPVRRNLCCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISK 182
                 +L  ++T +   L   E  + N+LE   V +L+KL+MMS++  + +  +  +  
Sbjct: 148 EEGA-YSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHLKT 207

Query: 183 ELGLPNGFRESILAKYSDDFRLVDL---EIVELVEKHENGAVAEVE----QWREREFREK 242
           +LGLP  FR++I  +Y   FR+V       +EL       AV+  E      R RE  E+
Sbjct: 208 DLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAELSEDDNRTRESEER 267

Query: 243 WLSEFNVKYAFPINFPTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEK 302
            L          +  P G  +      K+  ++ + Y  PY   + F     G +++ EK
Sbjct: 268 NLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPY---KDFSHLRSGTLEK-EK 327

Query: 303 RAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFL 362
            A  V+HELLSLT EK   V+ L HFR +F     +R +L++HP +FY+S KG    VFL
Sbjct: 328 HACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFL 387

Query: 363 REAYAKGCLVEPNPIYMVRRKMQDLVLLGR 376
           REAY    L++ +P+ +V+ KM+ LV + R
Sbjct: 388 REAYRNSELIDKDPLTLVKEKMRALVSVPR 411

BLAST of Lcy06g016470 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 8.7e-35
Identity = 114/362 (31.49%), Postives = 185/362 (51.10%), Query Frame = 0

Query: 30  RWRKPVVNAQTRLEDRTRDLKLDKLATQLRKLRIILKLHELMID--------RKRGPFVS 89
           R R   V AQ  ++ R ++   D +  + +KL+++LKL  +++         R+ G F  
Sbjct: 43  RPRPAAVVAQAAVK-RRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRR 102

Query: 90  LQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVIND 149
              ++R R ++AL       + ++P VFDV    V  +L  R+T     L   E  + N+
Sbjct: 103 DLGLTRKRRLIAL-------LRRFPGVFDVVEEGV-YSLRFRLTPAAERLYLDELRLRNE 162

Query: 150 LETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLVDLE--- 209
            E   V +L+KLLMMS    + +  +  +  +LGLP  FR+++  +Y   FR+V ++   
Sbjct: 163 SEGLAVAKLRKLLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGP 222

Query: 210 IVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINF-----PTGFRIEAGFREK 269
            +EL       AV+  E   E E R +   E N+    P+ F     P G ++  G   +
Sbjct: 223 ALELTHWDPELAVSAAE-LAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARR 282

Query: 270 LRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRR 329
           +  ++ + Y  PY       +RS  G    EK A  V+HE+LSLTVEK   V+ L HFR 
Sbjct: 283 IARFKEMPYISPYADFS--HLRS--GSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFRE 342

Query: 330 DFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLL 376
           +F    ++R ++++HP +FY+S KG+   VFLREAY    LVE N + +++ KM+ LV +
Sbjct: 343 EFRFSQSLRGMIIRHPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAV 390

BLAST of Lcy06g016470 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.2e-21
Identity = 92/343 (26.82%), Postives = 156/343 (45.48%), Query Frame = 0

Query: 47  RDLKLDKLATQLR--KLRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHK 106
           RD   D +   LR  +L+ ++ L   ++ ++    + +  +S+      ++  I  F+ K
Sbjct: 33  RDPYFDNIEHILRSSQLKSVVSLKNCIV-QEPNRCIPISAISKKTRQFDVSTKIAHFLRK 92

Query: 107 YPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHV 166
           +P +F+ F  P       R+T +   L +QE  V      +   RLKKL++MS +  L +
Sbjct: 93  FPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPL 152

Query: 167 HALRLISKELGLPNGFRESILAKYSDDFRLVDLE--IVELVEKHENG-AVAEVEQWRERE 226
             ++ +   LGLP+ + +         FR VD+E  +  L   +  G  V  V Q    +
Sbjct: 153 SIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNAMK 212

Query: 227 FREKWLSEFNVKYAFPINFPTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQ 286
            R   +S   ++  FP+    G R+     + L  +Q+L Y  PY+        S     
Sbjct: 213 KRRGEVSLEEIE--FPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSS----D 272

Query: 287 RHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ 346
             EKR V  LHELL L VE   + ++L+  ++ F +   + +   +HP IFY+S K  T 
Sbjct: 273 IAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTC 332

Query: 347 VVFLREAYAKGCLVEPNPIYMVRRKM------QDLVLLGRRHT 379
              LRE Y     VE +P+  VR+K        +L+L  RR++
Sbjct: 333 TAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNS 368

BLAST of Lcy06g016470 vs. ExPASy TrEMBL
Match: A0A6J1FCB5 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444101 PE=4 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 9.5e-210
Identity = 368/416 (88.46%), Postives = 388/416 (93.27%), Query Frame = 0

Query: 1   MKSFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRK 60
           MK FESA SLSTT+FSR+RFGPFNHFCQ RW KP V AQTRLEDRTRDLKLDKLATQ+RK
Sbjct: 1   MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRK 60

Query: 61  LRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNL 120
           LRII KL ELMIDRKRGPFVSLQIMSRWRN V L IGIG+FVHKYPHVFDVF HP+RRNL
Sbjct: 61  LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120

Query: 121 CCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGF 180
           CCRITGKM AL+KQEENVIND E ETV+RLKKLLMMSVNG LH+HALRLISKELGLP+GF
Sbjct: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGF 180

Query: 181 RESILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINF 240
           RESIL KYSDDFRLVDLEIVELV+KHEN AVAEVEQWREREFREKWLSEF+VK+AFPINF
Sbjct: 181 RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF 240

Query: 241 PTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVE 300
           PTGF+I+ GFREKLRNWQRL YA PYEKRQGFGVRSCGG+ R EKRAVAVLHELLSLTVE
Sbjct: 241 PTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE 300

Query: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPI 360
           KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAYAKGCLVEPNPI
Sbjct: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPI 360

Query: 361 YMVRRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
           Y+VRRKMQDL+LLGRRHTKQLESSM   E+ SAA NGDWLS+SEGSWVLPILQGFD
Sbjct: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416

BLAST of Lcy06g016470 vs. ExPASy TrEMBL
Match: A0A6J1I6W3 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470166 PE=4 SV=1)

HSP 1 Score: 729.9 bits (1883), Expect = 5.7e-207
Identity = 364/416 (87.50%), Postives = 385/416 (92.55%), Query Frame = 0

Query: 1   MKSFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRK 60
           MK FESA SLSTT+FSR+RFGPFNHFCQ RW KP V AQTRLEDR RDLKLD LATQ+RK
Sbjct: 1   MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRK 60

Query: 61  LRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNL 120
           LRII KL ELMIDRKRGPFVSLQIMSRWRN V L IGIG+FVHKYPHVFDVF HP+RRNL
Sbjct: 61  LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120

Query: 121 CCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGF 180
           CCRITGKM AL+KQEENVIND E ETV+RLKKLLMMS NG LH+HALRLISKELGLP+GF
Sbjct: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGF 180

Query: 181 RESILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINF 240
           RESIL KYSDDFRLVDLEIVELV+KHEN AVAEVEQWREREFREKWLSEF+VK+AFPINF
Sbjct: 181 RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF 240

Query: 241 PTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVE 300
           PTG++I+ GFREKLRNWQRL YA PYEKRQGFGVRSCGG+ RHEKRAVAVLHELLSLTVE
Sbjct: 241 PTGYKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVE 300

Query: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPI 360
           KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAYAKGCLVEPNPI
Sbjct: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPI 360

Query: 361 YMVRRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
           Y+VRRKMQDL+LLGRRHTKQLESSM   E+ SAA NGD LS+SEGSWVLPILQGFD
Sbjct: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 416

BLAST of Lcy06g016470 vs. ExPASy TrEMBL
Match: A0A0A0LFE1 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816690 PE=4 SV=1)

HSP 1 Score: 729.2 bits (1881), Expect = 9.8e-207
Identity = 360/413 (87.17%), Postives = 384/413 (92.98%), Query Frame = 0

Query: 4   FESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRKLRI 63
           FES + LS   FSRI FGPFNHFCQ RWRKP+VNAQTRLEDRTRDLKLDKLATQL+K R+
Sbjct: 7   FESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQLKKFRV 66

Query: 64  ILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCR 123
           ILKL+ELM +RKRGPFVSLQIMSRWRNIV + IGIGEF+HKYPH+FD+F HPVRRNLCCR
Sbjct: 67  ILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCCR 126

Query: 124 ITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRES 183
           ITGKM AL+KQEENVIND+E ETV+RLKKLLMMSVNG LHVHALRLIS+ELGLP+GFRES
Sbjct: 127 ITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRES 186

Query: 184 ILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTG 243
           IL KYSDDFRLVDLEIVELVEKH+NGA+AEVE+WREREFREKWLSEF+VKYAFPINFPTG
Sbjct: 187 ILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFPINFPTG 246

Query: 244 FRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLV 303
           F IE GFREKLRNWQRL Y  PYEKRQGFG RS GG+QRHEKRAVAVLHELLSLTVEKLV
Sbjct: 247 FIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLV 306

Query: 304 DVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMV 363
           DVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKG TQ+VFLREAYAKGCLVEPNPIY+V
Sbjct: 307 DVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEPNPIYIV 366

Query: 364 RRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
           RRKMQDLVLLGRRHTKQLESSM   END+A  NGDWLS+SEGSWVLPILQGFD
Sbjct: 367 RRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 419

BLAST of Lcy06g016470 vs. ExPASy TrEMBL
Match: A0A1S3B7J9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103486860 PE=4 SV=1)

HSP 1 Score: 725.7 bits (1872), Expect = 1.1e-205
Identity = 361/413 (87.41%), Postives = 382/413 (92.49%), Query Frame = 0

Query: 4   FESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRKLRI 63
           FES   LS   FSRI FGPFNHFCQ RWRKPVV+AQTRLE RTRDLKLDKLATQL+K R+
Sbjct: 7   FESPFFLSKPTFSRIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQLQKFRV 66

Query: 64  ILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCR 123
           ILKLHELM +RKRGPFVSLQIMSRWRNIV + IGIGEF+HKYPHVFDVF HPVRRNLCCR
Sbjct: 67  ILKLHELMTNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVRRNLCCR 126

Query: 124 ITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRES 183
           ITGKM AL+KQEENVIND+E ETV+RLKKLLMMSVNG LHVHALRLIS+ELGLP+GFRES
Sbjct: 127 ITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRES 186

Query: 184 ILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTG 243
           IL KYSDDFRLVDLEIVELVEKHE+GAVAEVE+WREREFREKWLSEF+VKYAFPINFPTG
Sbjct: 187 ILEKYSDDFRLVDLEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFPINFPTG 246

Query: 244 FRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLV 303
           F IE GFREKLRNWQRL Y  PYEKRQ FG RS GG+QRHEKRAVAVLHELLSLTVEKLV
Sbjct: 247 FIIEGGFREKLRNWQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLV 306

Query: 304 DVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMV 363
           DV+RLVHFRRDFAIEVNIRELLLKHPG+FYISTKG TQ+VFLREAYAKGCLVEPNPIY+V
Sbjct: 307 DVDRLVHFRRDFAIEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEPNPIYIV 366

Query: 364 RRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
           RRKMQDLVLLGRRHTKQLESSM   END+AA NGDWLS+SEGSWVLPILQGFD
Sbjct: 367 RRKMQDLVLLGRRHTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 419

BLAST of Lcy06g016470 vs. ExPASy TrEMBL
Match: A0A6J1FCD7 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444101 PE=4 SV=1)

HSP 1 Score: 717.6 bits (1851), Expect = 2.9e-203
Identity = 356/401 (88.78%), Postives = 375/401 (93.52%), Query Frame = 0

Query: 16  SRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRKLRIILKLHELMIDRK 75
           SR+RFGPFNHFCQ RW KP V AQTRLEDRTRDLKLDKLATQ+RKLRII KL ELMIDRK
Sbjct: 7   SRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRK 66

Query: 76  RGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQE 135
           RGPFVSLQIMSRWRN V L IGIG+FVHKYPHVFDVF HP+RRNLCCRITGKM AL+KQE
Sbjct: 67  RGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQE 126

Query: 136 ENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLV 195
           ENVIND E ETV+RLKKLLMMSVNG LH+HALRLISKELGLP+GFRESIL KYSDDFRLV
Sbjct: 127 ENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLV 186

Query: 196 DLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTGFRIEAGFREKLR 255
           DLEIVELV+KHEN AVAEVEQWREREFREKWLSEF+VK+AFPINFPTGF+I+ GFREKLR
Sbjct: 187 DLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLR 246

Query: 256 NWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDF 315
           NWQRL YA PYEKRQGFGVRSCGG+ R EKRAVAVLHELLSLTVEKLVDVERLVHFRRDF
Sbjct: 247 NWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDF 306

Query: 316 AIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGR 375
           AIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAYAKGCLVEPNPIY+VRRKMQDL+LLGR
Sbjct: 307 AIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR 366

Query: 376 RHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
           RHTKQLESSM   E+ SAA NGDWLS+SEGSWVLPILQGFD
Sbjct: 367 RHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 407

BLAST of Lcy06g016470 vs. NCBI nr
Match: XP_038903898.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038903899.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038903900.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida])

HSP 1 Score: 751.9 bits (1940), Expect = 2.9e-213
Identity = 377/414 (91.06%), Postives = 388/414 (93.72%), Query Frame = 0

Query: 3   SFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRKLR 62
           S ESALSLS    SRI FGPFNHFCQ RWRKPV NAQTRLEDRTRDLKLDKLATQ +K R
Sbjct: 6   SLESALSLSKPKISRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQFQKFR 65

Query: 63  IILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCC 122
           IILKL ELMIDRKRGPFVSLQIMSRWRNIV L IGIGEFVHKYPHVFDVF HPVRRNLCC
Sbjct: 66  IILKLRELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVRRNLCC 125

Query: 123 RITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRE 182
           RITGKM AL+KQEENVINDLE ETV+RLKKLLMMSVNGALHVHALRLISKELGLP+GF E
Sbjct: 126 RITGKMTALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLPDGFGE 185

Query: 183 SILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPT 242
           SIL KYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEF+VKYAFPINFPT
Sbjct: 186 SILEKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFDVKYAFPINFPT 245

Query: 243 GFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKL 302
           GFRIE GFREKLRNWQRL YA PYEKRQGFG RS GG+QRHEKRAVAVLHELLSLTVEKL
Sbjct: 246 GFRIEGGFREKLRNWQRLPYAKPYEKRQGFGFRSSGGMQRHEKRAVAVLHELLSLTVEKL 305

Query: 303 VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYM 362
           VD+ERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAYAKGCL+EPNPIY+
Sbjct: 306 VDIERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLIEPNPIYI 365

Query: 363 VRRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
           VRRKMQDLVLLGRRHTKQLESSM   ENDSAAYNGDWLS+SEGSWVLPILQGFD
Sbjct: 366 VRRKMQDLVLLGRRHTKQLESSMEIKENDSAAYNGDWLSKSEGSWVLPILQGFD 419

BLAST of Lcy06g016470 vs. NCBI nr
Match: XP_022937832.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata] >XP_022937840.1 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 739.2 bits (1907), Expect = 2.0e-209
Identity = 368/416 (88.46%), Postives = 388/416 (93.27%), Query Frame = 0

Query: 1   MKSFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRK 60
           MK FESA SLSTT+FSR+RFGPFNHFCQ RW KP V AQTRLEDRTRDLKLDKLATQ+RK
Sbjct: 1   MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRK 60

Query: 61  LRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNL 120
           LRII KL ELMIDRKRGPFVSLQIMSRWRN V L IGIG+FVHKYPHVFDVF HP+RRNL
Sbjct: 61  LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120

Query: 121 CCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGF 180
           CCRITGKM AL+KQEENVIND E ETV+RLKKLLMMSVNG LH+HALRLISKELGLP+GF
Sbjct: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGF 180

Query: 181 RESILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINF 240
           RESIL KYSDDFRLVDLEIVELV+KHEN AVAEVEQWREREFREKWLSEF+VK+AFPINF
Sbjct: 181 RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF 240

Query: 241 PTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVE 300
           PTGF+I+ GFREKLRNWQRL YA PYEKRQGFGVRSCGG+ R EKRAVAVLHELLSLTVE
Sbjct: 241 PTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE 300

Query: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPI 360
           KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAYAKGCLVEPNPI
Sbjct: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPI 360

Query: 361 YMVRRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
           Y+VRRKMQDL+LLGRRHTKQLESSM   E+ SAA NGDWLS+SEGSWVLPILQGFD
Sbjct: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416

BLAST of Lcy06g016470 vs. NCBI nr
Match: KAG7027720.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 734.2 bits (1894), Expect = 6.3e-208
Identity = 365/416 (87.74%), Postives = 385/416 (92.55%), Query Frame = 0

Query: 1   MKSFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRK 60
           MK FESA SLSTT+FSR+RFGPFNHFCQ RW KP V AQTRLEDRTRDLKLDKLATQ+RK
Sbjct: 1   MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRK 60

Query: 61  LRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNL 120
           LR I KL ELMIDRKRGPFVSLQIMSRWRN V L IGIG+FVHKYPHVFDVF HP+RRNL
Sbjct: 61  LRTIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120

Query: 121 CCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGF 180
           CCRITGKM AL+KQEENVIND E ETV+RLKKLLMMSVNG LH+HALRLISKELGLP+GF
Sbjct: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGF 180

Query: 181 RESILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINF 240
           RESIL KYSDDFRLVDLEIVELV+KHEN AVAEVEQWREREFREKWLSEF+VK+AFPINF
Sbjct: 181 RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF 240

Query: 241 PTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVE 300
           PTGF+I+ GFREKLRNWQRL Y  PYEKRQGFGVRSCGG+ R EKRAVAVLHELLSLTVE
Sbjct: 241 PTGFKIKGGFREKLRNWQRLPYVKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE 300

Query: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPI 360
           KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAY KGCLVEPNPI
Sbjct: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYTKGCLVEPNPI 360

Query: 361 YMVRRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
           Y+VRRKMQDL+LLGRRHTKQLESSM   E+ SAA NGDWLS+SEGSWVLPILQGFD
Sbjct: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416

BLAST of Lcy06g016470 vs. NCBI nr
Match: XP_023539959.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 734.2 bits (1894), Expect = 6.3e-208
Identity = 366/416 (87.98%), Postives = 387/416 (93.03%), Query Frame = 0

Query: 1   MKSFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRK 60
           MK FESA SLSTT+FSR+RFGPFNHFCQ RW KP V AQTRL+DRTRDLKLDKLATQ+RK
Sbjct: 1   MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLQDRTRDLKLDKLATQIRK 60

Query: 61  LRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNL 120
           LRII KL ELMIDRKRGPFVSLQIMSRWRN V L IGIG+FVHKYPHVFDVF HP+RRNL
Sbjct: 61  LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120

Query: 121 CCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGF 180
           CCRITGKM AL+KQEENVIND E ETV+RLKKLLMMSVNG LH+HALRLISKELGLP+GF
Sbjct: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGF 180

Query: 181 RESILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINF 240
           RESIL KYSDDFRLVDLEIVELV KHEN +VAEVEQWREREFREKWLSEF+VK+AFPINF
Sbjct: 181 RESILGKYSDDFRLVDLEIVELVGKHENVSVAEVEQWREREFREKWLSEFDVKFAFPINF 240

Query: 241 PTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVE 300
           PTGF+I+ GFREKLRNWQRL YA PYEKRQGFGVRSCGG+ RHEKRAVAVLHELLSLTVE
Sbjct: 241 PTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVE 300

Query: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPI 360
           KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAYAKG LVEPNPI
Sbjct: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGFLVEPNPI 360

Query: 361 YMVRRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
           Y+VRRKMQDL+LLGRRHTKQLESSM   E+ SAA NGDWLS+SEGSWVLPILQGFD
Sbjct: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHVSAADNGDWLSKSEGSWVLPILQGFD 416

BLAST of Lcy06g016470 vs. NCBI nr
Match: XP_022971448.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 729.9 bits (1883), Expect = 1.2e-206
Identity = 364/416 (87.50%), Postives = 385/416 (92.55%), Query Frame = 0

Query: 1   MKSFESALSLSTTNFSRIRFGPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRK 60
           MK FESA SLSTT+FSR+RFGPFNHFCQ RW KP V AQTRLEDR RDLKLD LATQ+RK
Sbjct: 1   MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRK 60

Query: 61  LRIILKLHELMIDRKRGPFVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNL 120
           LRII KL ELMIDRKRGPFVSLQIMSRWRN V L IGIG+FVHKYPHVFDVF HP+RRNL
Sbjct: 61  LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120

Query: 121 CCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGF 180
           CCRITGKM AL+KQEENVIND E ETV+RLKKLLMMS NG LH+HALRLISKELGLP+GF
Sbjct: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGF 180

Query: 181 RESILAKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINF 240
           RESIL KYSDDFRLVDLEIVELV+KHEN AVAEVEQWREREFREKWLSEF+VK+AFPINF
Sbjct: 181 RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF 240

Query: 241 PTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVE 300
           PTG++I+ GFREKLRNWQRL YA PYEKRQGFGVRSCGG+ RHEKRAVAVLHELLSLTVE
Sbjct: 241 PTGYKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVE 300

Query: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPI 360
           KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ+VFLREAYAKGCLVEPNPI
Sbjct: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPI 360

Query: 361 YMVRRKMQDLVLLGRRHTKQLESSM---ENDSAAYNGDWLSQSEGSWVLPILQGFD 414
           Y+VRRKMQDL+LLGRRHTKQLESSM   E+ SAA NGD LS+SEGSWVLPILQGFD
Sbjct: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 416

BLAST of Lcy06g016470 vs. TAIR 10
Match: AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 482.3 bits (1240), Expect = 4.0e-136
Identity = 237/398 (59.55%), Postives = 307/398 (77.14%), Query Frame = 0

Query: 22  PFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKLATQLRKLRIILKLHELMIDRKRGPFVS 81
           P   + Q RW KPV +AQTRLE+RTRD +LDK+  Q+RKL IIL++ +LM  +KRGPFVS
Sbjct: 45  PLYFYNQRRWLKPVDSAQTRLENRTRDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVS 104

Query: 82  LQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVIND 141
           LQ+MSRW+N+V LN+ +G F+ KYPH F++F+HP  +NLCC+IT K   LI +EENV+ +
Sbjct: 105 LQLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRE 164

Query: 142 LETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLVDLEIVE 201
            E + V+R+KKLL++S +G L VHALRLI KELGLP  FR+SILAKYS +FRLVDLE +E
Sbjct: 165 CEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLETLE 224

Query: 202 LVEK-HENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTGFRIEAGFREKLRNWQRL 261
           LV++  E+  VA+VE+WRE E+REKWLS+F   YAFPI+ PTGF+IE GFRE+L+NWQR+
Sbjct: 225 LVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRV 284

Query: 262 SYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVN 321
            Y  PY++++        G++R EKR VAV+HELLSLTVEK+V+VERL HFR+D  IEVN
Sbjct: 285 PYVKPYDRKE-----ISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVN 344

Query: 322 IRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGRRHTKQ 381
           +RE++LKHPGIFY+STKG++Q +FLREAY+KGCL+EPNPIY VRRKM DLVLL  R+++ 
Sbjct: 345 VREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRYSRM 404

Query: 382 L-----ESSMENDS----AAYNGDWLSQSEGSWVLPIL 410
           L     E+  E  S     + N DW    +G WVLPIL
Sbjct: 405 LLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLPIL 437

BLAST of Lcy06g016470 vs. TAIR 10
Match: AT5G45790.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 412.9 bits (1060), Expect = 3.0e-115
Identity = 200/341 (58.65%), Postives = 262/341 (76.83%), Query Frame = 0

Query: 79  FVSLQIMSRWRNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENV 138
           F + ++MSRW+N+V LN+ +G F+ KYPH F++F+HP  +NLCC+IT K   LI +EENV
Sbjct: 17  FSTNKLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENV 76

Query: 139 INDLETETVRRLKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLVDLE 198
           + + E + V+R+KKLL++S +G L VHALRLI KELGLP  FR+SILAKYS +FRLVDLE
Sbjct: 77  VRECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLE 136

Query: 199 IVELVEK-HENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTGFRIEAGFREKLRNW 258
            +ELV++  E+  VA+VE+WRE E+REKWLS+F   YAFPI+ PTGF+IE GFRE+L+NW
Sbjct: 137 TLELVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNW 196

Query: 259 QRLSYAMPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAI 318
           QR+ Y  PY++++        G++R EKR VAV+HELLSLTVEK+V+VERL HFR+D  I
Sbjct: 197 QRVPYVKPYDRKE-----ISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGI 256

Query: 319 EVNIRELLLKHPGIFYISTKGNTQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGRRH 378
           EVN+RE++LKHPGIFY+STKG++Q +FLREAY+KGCL+EPNPIY VRRKM DLVLL  R+
Sbjct: 257 EVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRY 316

Query: 379 TKQL-----ESSMENDS----AAYNGDWLSQSEGSWVLPIL 410
           ++ L     E+  E  S     + N DW    +G WVLPIL
Sbjct: 317 SRMLLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLPIL 352

BLAST of Lcy06g016470 vs. TAIR 10
Match: AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 253.4 bits (646), Expect = 3.0e-67
Identity = 142/359 (39.55%), Postives = 210/359 (58.50%), Query Frame = 0

Query: 33  KPVVNAQT--RLEDRTRDLKLDKLATQLRKLRIILKLHELMIDRKRGPFV--SLQIMSRW 92
           KP   + T  + +DR RD   D      +K+R ++K H L++ +         L  ++R 
Sbjct: 32  KPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARR 91

Query: 93  RNIVALNIGIGEFVHKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVINDLETETVR 152
             +       G F+ K+PHVF+++ HPV+R L CR+T K +  I+ E   + D   + V 
Sbjct: 92  LGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVT 151

Query: 153 RLKKLLMMSVNGALHVHALRLISKELGLPNGFRESILAKYSDDFRLVDLE-----IVELV 212
           RL+KL+MMS  G + +  +R+   E GLP  F  S++ K+   FRL+D E      +E+V
Sbjct: 152 RLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIV 211

Query: 213 EKHENGAVAEVEQWREREFREKWLSEFNVKYAFPINFPTGFRIEAGFREKLRNWQRLSYA 272
           EK  N ++  +E+ RE E+R K +   +V+++F +NFP GF+I   FR  +  WQRL Y 
Sbjct: 212 EKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYW 271

Query: 273 MPYEKRQGFGVRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRE 332
            PYE   G+ +RS     R EKR+VA +HELLSLTVEK + +ER+ HFR    +   ++E
Sbjct: 272 SPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKE 331

Query: 333 LLLKHPGIFYISTKGN---TQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGRRHTK 380
            LL+H GIFYIST+GN      VFLRE Y +G LVEPN +Y+ RR++ +LVL+  R  K
Sbjct: 332 FLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390

BLAST of Lcy06g016470 vs. TAIR 10
Match: AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 240.7 bits (613), Expect = 2.0e-63
Identity = 136/342 (39.77%), Postives = 208/342 (60.82%), Query Frame = 0

Query: 45  RTRDLKLDKLATQLRKLRIILKLHELMIDRKRG--PFVSLQIMSRWRNIVALNIGIGEFV 104
           R+RD   +KL  + + L  ++ + +L +       P +S++ +SR    + LN G   F+
Sbjct: 34  RSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLSQKLHLNRGAASFL 93

Query: 105 HKYPHVFDVFSHPVRRNLCCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGAL 164
            KYPH+F V   PV+    CR+T   + + +QE   I    +  V RL +LL MS++ ++
Sbjct: 94  RKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRLVRLLSMSISKSI 153

Query: 165 HVHALRLISKELGLPNGFRESILAKYSDDFRLVD-----LEIVELVEKHENGA--VAEVE 224
            + A+  + +ELGLP+ F +S+++K    F+L D       I+ELV++ E      A VE
Sbjct: 154 PLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQEEEKRLEFEAAVE 213

Query: 225 QWREREFREKWLS--EFNVKYAFPINFPTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFG 284
           +WR  E  ++  S     ++++F  ++P G R+   F+ K++ WQRL Y  PYE   G  
Sbjct: 214 KWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLPYVGPYEDMVG-K 273

Query: 285 VRSCGGIQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFY 344
            +S  G+   EKRAVA+ HE L+LTVEK+V+VE++ HFR+ F I++NIR+L L HPG+FY
Sbjct: 274 KKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNIRDLFLDHPGMFY 333

Query: 345 ISTKGNTQVVFLREAYAKGCLVEPNPIYMVRRKMQDLVLLGR 376
           +STKG    VFLREAY +G L++PNP+Y  RRK+ DLVLLGR
Sbjct: 334 VSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGR 374

BLAST of Lcy06g016470 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 149.4 bits (376), Expect = 6.2e-36
Identity = 111/390 (28.46%), Postives = 192/390 (49.23%), Query Frame = 0

Query: 3   SFESALSLSTTNFSRIRF--------GPFNHFCQTRWRKPVVNAQTRLEDRTRDLKLDKL 62
           S +S L +ST   +R +F          +  +  +R  + VV        R ++L  D +
Sbjct: 28  SVKSGLPMSTIRAARSQFMGEGLILGNKYGFWSTSRKTRVVVEPVRAAVKRRKELTFDSV 87

Query: 63  ATQLRKLRIILKLHELMIDRKRGPFVSLQIMSRWRNIVAL--NIGIGEFVHKYPHVFDVF 122
             + +KL+++L + ++++ +     +SL+ + ++R  + L         + KYP VF++ 
Sbjct: 88  VQRDKKLKLVLNIRKILVSQP-DRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEIV 147

Query: 123 SHPVRRNLCCRITGKMIALIKQEENVINDLETETVRRLKKLLMMSVNGALHVHALRLISK 182
                 +L  ++T +   L   E  + N+LE   V +L+KL+MMS++  + +  +  +  
Sbjct: 148 EEGA-YSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHLKT 207

Query: 183 ELGLPNGFRESILAKYSDDFRLVDL---EIVELVEKHENGAVAEVE----QWREREFREK 242
           +LGLP  FR++I  +Y   FR+V       +EL       AV+  E      R RE  E+
Sbjct: 208 DLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAELSEDDNRTRESEER 267

Query: 243 WLSEFNVKYAFPINFPTGFRIEAGFREKLRNWQRLSYAMPYEKRQGFGVRSCGGIQRHEK 302
            L          +  P G  +      K+  ++ + Y  PY   + F     G +++ EK
Sbjct: 268 NLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPY---KDFSHLRSGTLEK-EK 327

Query: 303 RAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQVVFL 362
            A  V+HELLSLT EK   V+ L HFR +F     +R +L++HP +FY+S KG    VFL
Sbjct: 328 HACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFL 387

Query: 363 REAYAKGCLVEPNPIYMVRRKMQDLVLLGR 376
           REAY    L++ +P+ +V+ KM+ LV + R
Sbjct: 388 REAYRNSELIDKDPLTLVKEKMRALVSVPR 411

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q689D64.3e-6639.55Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
Q65XL52.3e-3530.37Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... [more]
A0MFS58.7e-3528.46Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
B6TTV88.7e-3531.49Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... [more]
Q9ZUZ63.2e-2126.82Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... [more]
Match NameE-valueIdentityDescription
A0A6J1FCB59.5e-21088.46protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1I6W35.7e-20787.50protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A0A0LFE19.8e-20787.17PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816690 PE=4 S... [more]
A0A1S3B7J91.1e-20587.41protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103486860 PE=4... [more]
A0A6J1FCD72.9e-20388.78protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=... [more]
Match NameE-valueIdentityDescription
XP_038903898.12.9e-21391.06protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038903899.1 protein ... [more]
XP_022937832.12.0e-20988.46protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata] >XP_02293784... [more]
KAG7027720.16.3e-20887.74Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy... [more]
XP_023539959.16.3e-20887.98protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo][more]
XP_022971448.11.2e-20687.50protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G45790.24.0e-13659.55Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G45790.13.0e-11558.65Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G33495.13.0e-6739.55Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT1G06440.12.0e-6339.77Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G01037.16.2e-3628.46Ubiquitin carboxyl-terminal hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 47..375
e-value: 3.7E-107
score: 358.1
IPR045040PORR familyPANTHERPTHR31476PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTICcoord: 12..412
NoneNo IPR availablePANTHERPTHR31476:SF12UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEINcoord: 12..412

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy06g016470.1Lcy06g016470.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003723 RNA binding