Lcy06g012380 (gene) Sponge gourd (P93075) v1

Overview
NameLcy06g012380
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibonuclease H-like superfamily protein
LocationChr06: 15851711 .. 15853292 (+)
RNA-Seq ExpressionLcy06g012380
SyntenyLcy06g012380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGCCAAACAAAGTTGGAGGCTGCTAAGGAATACCAATAGTATCCTGTACAAGATCCTGAGAGGAAGATATTTCAAAGGAAGAAATTTTCTCGAAGCCCCTATAGGAAATTCGCCTTCCCTCCCGTGGAGAAGTATTTGTTGGGGTCGCAACCTCTTCCTTAAAGGCTTCAAGTGGAGGGTGGGGAATGAAAATCTTATAACTATTGATAAGGACCCTTGGATCAGTAGAGAAGGCAACCCAAAAATTTACTCAAACCTTTCCTCTCTTAAAGGCAAAAGAGTCAAGGAGCTTCTTGATGAAAACAACAATTGGAGAGAGAAGGTGATCTTTCAAGAATTCTCCCCCCAAGAGGTTTTGGACATTCTGAACATGCCGACCGGAAGTAGGGACACAAAAGATGAAATAATGTGGTATCTTGATAAGAGAGGAATATTCTCTGTCAAAAGTGTTTACAAACTCGCCATGGAAGGAATCTCCCAACAAGAAAGCTCTCAATCGGATACATCTAAGTCTACAACTCTTTGGAAGTGTTTGTGGAAATCTAATGTGTTGCCTAGATCAAAAGTTTGTGCATGGAAGATAATAAACGACATTATCCCATCCAAGGCAAACATAAAAAAAAAAGGGAGTAGATCTCAACCCTTTGTGCTCTTTTTGTAGGAAAAAACCAGAAACTTCCCATCTAATATGGGGTTGTAAATTCTCGAGAGGCCTATGGTCCAGATACATCCCTAAATTTCTCTCTTTGTTTTCTTTTTGCAGAGATGAGTGGTCGACGAAGGAATTTTGGAGCTGGATGGAATCAAATTTGAATAAAGAAGAAATATCAATCGGGATCATCATTATGTGGAAAATTTGGGAATACAGAAACCAATTATAAGCTTTCAATCAACTGCCAGCAGAGGAGATAATTCAAAACAGAATTGAAGCAAGTTTAAAGGATTGAAGTTCTTCTTACCTCAAGACCCAATCCCAAAATAGGTTGGGGAGCCATGTGAGTCAGGTGCATCGGGAGAAGCCACCACCAAACATCTGGAGAATGAACTGCGATGCCACCTGGAACGAACAAGAAGGGCGAGGAGGATTAGGGTGGGTAATGCATGACTCAGATGGATCCCTGATTTGTGGTTGTATGCATCAAATTTCAAAGAAATGGGCAATCAAATCGTTGGAGGCAAAAACAATTTTAGAAGGAATCAAGCATACCTCGAAAATGTGCAGCCAGTAAAGCATTCCCCTCGTGATCAAATCAGATGCCTTAACTGTGGTGAAGGTCCTCAATGGCGAATCAGAAGACCTCTCCGATCTGAAAACTCTCACAGATGAAATCGCCTTTAGGGCCGACCGAGCTCATTCCACTTCTTTTCGTTACTGTAATAGGCTTTTGAACACAGACGCGCACTGTGATGTGAAGAGAGCAGCTACTCTTCCCCTCTGGTCTTCTTCATCCCTCTCTTCTGGTTCTTCATTTTTTGTTCGGACAGAGGAGCCTCTCTCTCACGGGAAATGGAACAGGTCTTTTGGGCTCCCAATAACCCAAGTTGTTTTTTCCCTCTCTTTGAAGAGATTAGTGTAA

mRNA sequence

ATGCTGGCCAAACAAAGTTGGAGGCTGCTAAGGAATACCAATAGTATCCTGTACAAGATCCTGAGAGGAAGATATTTCAAAGGAAGAAATTTTCTCGAAGCCCCTATAGGAAATTCGCCTTCCCTCCCGTGGAGAAGTATTTGTTGGGGTCGCAACCTCTTCCTTAAAGGCTTCAAGTGGAGGGTGGGGAATGAAAATCTTATAACTATTGATAAGGACCCTTGGATCAGTAGAGAAGGCAACCCAAAAATTTACTCAAACCTTTCCTCTCTTAAAGGCAAAAGAGTCAAGGAGCTTCTTGATGAAAACAACAATTGGAGAGAGAAGGTGATCTTTCAAGAATTCTCCCCCCAAGAGGTTTTGGACATTCTGAACATGCCGACCGGAAGTAGGGACACAAAAGATGAAATAATGTGGTTGGGGAGCCATGTGAGTCAGGTGCATCGGGAGAAGCCACCACCAAACATCTGGAGAATGAACTGCGATGCCACCTGGAACGAACAAGAAGGGCGAGGAGGATTAGGGTGGGTCCTCAATGGCGAATCAGAAGACCTCTCCGATCTGAAAACTCTCACAGATGAAATCGCCTTTAGGGCCGACCGAGCTCATTCCACTTCTTTTCGTTACTGTAATAGGCTTTTGAACACAGACGCGCACTGTGATGTGAAGAGAGCAGCTACTCTTCCCCTCTGGTCTTCTTCATCCCTCTCTTCTGGTTCTTCATTTTTTGTTCGGACAGAGGAGCCTCTCTCTCACGGGAAATGGAACAGGTCTTTTGGGCTCCCAATAACCCAAGTTGTTTTTTCCCTCTCTTTGAAGAGATTAGTGTAA

Coding sequence (CDS)

ATGCTGGCCAAACAAAGTTGGAGGCTGCTAAGGAATACCAATAGTATCCTGTACAAGATCCTGAGAGGAAGATATTTCAAAGGAAGAAATTTTCTCGAAGCCCCTATAGGAAATTCGCCTTCCCTCCCGTGGAGAAGTATTTGTTGGGGTCGCAACCTCTTCCTTAAAGGCTTCAAGTGGAGGGTGGGGAATGAAAATCTTATAACTATTGATAAGGACCCTTGGATCAGTAGAGAAGGCAACCCAAAAATTTACTCAAACCTTTCCTCTCTTAAAGGCAAAAGAGTCAAGGAGCTTCTTGATGAAAACAACAATTGGAGAGAGAAGGTGATCTTTCAAGAATTCTCCCCCCAAGAGGTTTTGGACATTCTGAACATGCCGACCGGAAGTAGGGACACAAAAGATGAAATAATGTGGTTGGGGAGCCATGTGAGTCAGGTGCATCGGGAGAAGCCACCACCAAACATCTGGAGAATGAACTGCGATGCCACCTGGAACGAACAAGAAGGGCGAGGAGGATTAGGGTGGGTCCTCAATGGCGAATCAGAAGACCTCTCCGATCTGAAAACTCTCACAGATGAAATCGCCTTTAGGGCCGACCGAGCTCATTCCACTTCTTTTCGTTACTGTAATAGGCTTTTGAACACAGACGCGCACTGTGATGTGAAGAGAGCAGCTACTCTTCCCCTCTGGTCTTCTTCATCCCTCTCTTCTGGTTCTTCATTTTTTGTTCGGACAGAGGAGCCTCTCTCTCACGGGAAATGGAACAGGTCTTTTGGGCTCCCAATAACCCAAGTTGTTTTTTCCCTCTCTTTGAAGAGATTAGTGTAA

Protein sequence

MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELLDENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMWLGSHVSQVHREKPPPNIWRMNCDATWNEQEGRGGLGWVLNGESEDLSDLKTLTDEIAFRADRAHSTSFRYCNRLLNTDAHCDVKRAATLPLWSSSSLSSGSSFFVRTEEPLSHGKWNRSFGLPITQVVFSLSLKRLV
Homology
BLAST of Lcy06g012380 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.2e-09
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0

Query: 1   MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKW 60
           +LAKQS+R++   +++L ++LR RYF   + +E  +G  PS  WRSI  GR L  +G   
Sbjct: 69  LLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLR 128

Query: 61  RVGNENLITIDKDPWISRE 80
            +G+     +  D WI  E
Sbjct: 129 TIGDGIHTKVWLDRWIMDE 147

BLAST of Lcy06g012380 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-26
Identity = 62/139 (44.60%), Postives = 85/139 (61.15%), Query Frame = 0

Query: 1   MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKW 60
           MLAKQSWR+LR+ +S+L K LRG+YFK  +FL+A +G  PS  WRSI WGR+LF KG++W
Sbjct: 530 MLAKQSWRILRHPDSLLAKTLRGKYFKTGSFLQAKLGARPSYAWRSILWGRDLFKKGYRW 589

Query: 61  RVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELLDENNNWREKVIFQEFSPQEV 120
           +VGN   I +  DPW+ R+GN         ++   V  L++    W E  + + F   E 
Sbjct: 590 KVGNGFSINLSSDPWLPRDGNFSPVFTHIHVRNFSVAWLMEGRGRWDEIKVRESFIVSEA 649

Query: 121 LDILNMPTGSRDTKDEIMW 140
             IL  P  S+D  DEI+W
Sbjct: 650 DIILQTPLPSQDKDDEIIW 668

BLAST of Lcy06g012380 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.5e-25
Identity = 59/140 (42.14%), Postives = 86/140 (61.43%), Query Frame = 0

Query: 1   MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKW 60
           +LAKQ WR+L + NS+L ++L+GRYFK  +F+EA I  +PS  WRSI WGR+L  KG +W
Sbjct: 658 LLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRSILWGRDLLKKGLRW 717

Query: 61  RVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELLD-ENNNWREKVIFQEFSPQE 120
           R+GN + + I  D W+  +   KI S+       RV  L+D E   W+  V+  EF+P E
Sbjct: 718 RIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDE 777

Query: 121 VLDILNMPTGSRDTKDEIMW 140
              IL++P G    +D ++W
Sbjct: 778 AKGILSIPIGRGAEEDRLIW 797

BLAST of Lcy06g012380 vs. ExPASy TrEMBL
Match: A0A803PM68 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-24
Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 0

Query: 1   MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKW 60
           +LAKQ WR +R  NS+  K+L+  YF     LEA  GN  S  WRS+ WG+ +  KG++W
Sbjct: 205 LLAKQIWRCIRYPNSLCSKVLKASYFPNVGVLEAKSGNHASFVWRSLVWGKKIIQKGYRW 264

Query: 61  RVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELLDENNNWREKVIFQEFSPQEV 120
           R+GN N + + +DPW+ R    K+Y   S  +G  V +L+  N  W E+ I   F+P + 
Sbjct: 265 RIGNGNSVRVLEDPWLPRPVTFKVYDKPSLPEGMYVVDLMKGNGEWDEEFIRAFFNPTDA 324

Query: 121 LDILNMPTGSRDTKDEIMW 140
             IL MPT   + +D+I+W
Sbjct: 325 ELILGMPTSEWEIEDKILW 343

BLAST of Lcy06g012380 vs. ExPASy TrEMBL
Match: A0A803P9P5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-23
Identity = 59/141 (41.84%), Postives = 81/141 (57.45%), Query Frame = 0

Query: 1   MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKW 60
           +LAKQSW +  N +S+L+KIL+ RYFK   FLEA IG+ PSL WRSI WG+ L  KG +W
Sbjct: 344 LLAKQSWFIFDNPSSLLHKILKARYFKYNTFLEAEIGSYPSLTWRSIIWGKELLTKGLRW 403

Query: 61  RVGNENLITIDKDPWIS--REGNPKIYSNLSSLKGKRVKELLDENNNWREKVIFQEFSPQ 120
           +VGN N I    DPW+       P I+ N S     +V EL+     W   ++ Q F   
Sbjct: 404 KVGNGNQILCASDPWLPGITSFKPLIFKNPS--LSMKVSELITNQRQWNHSLLQQCFLES 463

Query: 121 EVLDILNMPTGSRDTKDEIMW 140
           +V  I ++P    D  D+++W
Sbjct: 464 DVAKIQSIPLTLCDQSDQLIW 482

BLAST of Lcy06g012380 vs. ExPASy TrEMBL
Match: A0A6J1CUD6 (uncharacterized protein LOC111014663 OS=Momordica charantia OX=3673 GN=LOC111014663 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 6.9e-23
Identity = 61/132 (46.21%), Postives = 76/132 (57.58%), Query Frame = 0

Query: 1   MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKW 60
           MLAKQSWR+LR+  S L K LRG+YF+  +FL+A +GNSPS  WRSI W R LF KG++W
Sbjct: 154 MLAKQSWRILRHPTSPLVKTLRGKYFRTGSFLKAKLGNSPSYAWRSILWERELFEKGYQW 213

Query: 61  RVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELLDENNNWREKVIFQEFSPQEV 120
           RVGN   I+I  D WI R+   +     SS+    V  L+ E   W E  I   F   E 
Sbjct: 214 RVGNGYSISIGLDSWIHRDSPYRPVFTPSSIFEHLVAWLMTERGRWNEHKIRDNFIISEA 273

Query: 121 LDILNMPTGSRD 133
             IL +P    D
Sbjct: 274 EQILKIPLPRED 285

BLAST of Lcy06g012380 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia])

HSP 1 Score: 130.6 bits (327), Expect = 2.1e-26
Identity = 62/139 (44.60%), Postives = 85/139 (61.15%), Query Frame = 0

Query: 1   MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKW 60
           MLAKQSWR+LR+ +S+L K LRG+YFK  +FL+A +G  PS  WRSI WGR+LF KG++W
Sbjct: 530 MLAKQSWRILRHPDSLLAKTLRGKYFKTGSFLQAKLGARPSYAWRSILWGRDLFKKGYRW 589

Query: 61  RVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELLDENNNWREKVIFQEFSPQEV 120
           +VGN   I +  DPW+ R+GN         ++   V  L++    W E  + + F   E 
Sbjct: 590 KVGNGFSINLSSDPWLPRDGNFSPVFTHIHVRNFSVAWLMEGRGRWDEIKVRESFIVSEA 649

Query: 121 LDILNMPTGSRDTKDEIMW 140
             IL  P  S+D  DEI+W
Sbjct: 650 DIILQTPLPSQDKDDEIIW 668

BLAST of Lcy06g012380 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 125.9 bits (315), Expect = 5.2e-25
Identity = 59/140 (42.14%), Postives = 86/140 (61.43%), Query Frame = 0

Query: 1   MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKW 60
           +LAKQ WR+L + NS+L ++L+GRYFK  +F+EA I  +PS  WRSI WGR+L  KG +W
Sbjct: 658 LLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRSILWGRDLLKKGLRW 717

Query: 61  RVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELLD-ENNNWREKVIFQEFSPQE 120
           R+GN + + I  D W+  +   KI S+       RV  L+D E   W+  V+  EF+P E
Sbjct: 718 RIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDE 777

Query: 121 VLDILNMPTGSRDTKDEIMW 140
              IL++P G    +D ++W
Sbjct: 778 AKGILSIPIGRGAEEDRLIW 797

BLAST of Lcy06g012380 vs. NCBI nr
Match: XP_024041860.1 (uncharacterized protein LOC112098995 [Citrus clementina])

HSP 1 Score: 120.2 bits (300), Expect = 2.9e-23
Identity = 53/146 (36.30%), Postives = 86/146 (58.90%), Query Frame = 0

Query: 1   MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKW 60
           ++AKQ WR+L+  NS++ +IL+ RYF+ + FL A +G+ PS  WRSI WGR +  +G +W
Sbjct: 61  LIAKQGWRILQFPNSLVARILQARYFQNKEFLNAGLGSQPSFIWRSILWGRQVISQGSRW 120

Query: 61  RVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELLDENNNWREKVIFQEFSPQEV 120
           RVGN   I + K  W+ R  + K  + L+      V EL+D+ + W E++I+  F   + 
Sbjct: 121 RVGNGQSILVHKSNWLPRPSSFKPIARLNLPADAIVVELIDDEHCWNERLIYSFFDKIDA 180

Query: 121 LDILNMPTGSRDTKDEIMWLGSHVSQ 147
             I+ +P   R  +DE++W    + Q
Sbjct: 181 SAIVRIPLPRRPMRDEVIWHYDKIGQ 206

BLAST of Lcy06g012380 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 119.4 bits (298), Expect = 4.9e-23
Identity = 52/139 (37.41%), Postives = 82/139 (58.99%), Query Frame = 0

Query: 1   MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKW 60
           ++AKQ WR+++  +S++ ++L+ RYFK   F+ A +G+ PS  WRSI WGR +  KG +W
Sbjct: 664 LVAKQGWRIMQFPSSLVARVLKARYFKHTGFMNAGLGSKPSFVWRSIVWGRQVLHKGARW 723

Query: 61  RVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELLDENNNWREKVIFQEFSPQEV 120
           R+GN   + +  + WI R    K  S  S      V EL+DE   WRE +I Q F P++ 
Sbjct: 724 RIGNGQNVLVYGNNWIPRPTTFKPISAPSMGTDTTVAELIDEKQQWREDLILQHFRPEDA 783

Query: 121 LDILNMPTGSRDTKDEIMW 140
             I+ +P   R  +D+++W
Sbjct: 784 EAIMQIPLPKRPKEDQLIW 802

BLAST of Lcy06g012380 vs. NCBI nr
Match: XP_024035599.1 (uncharacterized protein LOC112096407 [Citrus clementina])

HSP 1 Score: 119.0 bits (297), Expect = 6.4e-23
Identity = 56/139 (40.29%), Postives = 80/139 (57.55%), Query Frame = 0

Query: 1   MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKW 60
           +LAKQ WRLL+N  S++ K+++ RY+K  +FL A +G+SPS  WRSI WGR +  KG +W
Sbjct: 593 LLAKQGWRLLQNPESLVAKVIKARYYKNTDFLNAKVGSSPSFIWRSILWGRQVLQKGTRW 652

Query: 61  RVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELLDENNNWREKVIFQEFSPQEV 120
           R+GN   I I    WI R    K+    S   G +V EL+  N  W E +I Q F+  + 
Sbjct: 653 RIGNGEKIQIQASNWIPRPTTFKLIVEPSLPTGAKVSELILPNQQWNESMINQSFARMDA 712

Query: 121 LDILNMPTGSRDTKDEIMW 140
             I ++       +DEI+W
Sbjct: 713 DIIKSILLPRTPQEDEIIW 731

BLAST of Lcy06g012380 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 9.9e-14
Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = 0

Query: 1   MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKW 60
           +L KQ WR+L    S++ K+ + RYF   + L AP+G+ PS  W+SI   + +  +G + 
Sbjct: 68  LLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQGARA 127

Query: 61  RVGNENLITIDKDPWIS----------REGNPKIYSNLSSLKGKRVKELLDEN-NNWREK 120
            VGN   I I +  W+           +   P+ Y+++SS+   +V +L+DE+   WR+ 
Sbjct: 128 VVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSI--LKVSDLIDESGREWRKD 187

Query: 121 VIFQEFSPQEVLDILNMPTGSRDTKDEIMW 140
           VI   F   E   I  +  G R   D   W
Sbjct: 188 VIEMLFPEVERKLIGELRPGGRRILDSYTW 215

BLAST of Lcy06g012380 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-10
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0

Query: 1   MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKW 60
           +LAKQS+R++   +++L ++LR RYF   + +E  +G  PS  WRSI  GR L  +G   
Sbjct: 69  LLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLR 128

Query: 61  RVGNENLITIDKDPWISRE 80
            +G+     +  D WI  E
Sbjct: 129 TIGDGIHTKVWLDRWIMDE 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P932954.2e-0936.71Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A6J1DRA01.0e-2644.60uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DAR42.5e-2542.14uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A803PM682.1e-2439.57Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803P9P51.1e-2341.84Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J1CUD66.9e-2346.21uncharacterized protein LOC111014663 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
Match NameE-valueIdentityDescription
XP_022155286.12.1e-2644.60uncharacterized protein LOC111022423 [Momordica charantia][more]
XP_022150918.15.2e-2542.14uncharacterized protein LOC111018954 [Momordica charantia][more]
XP_024041860.12.9e-2336.30uncharacterized protein LOC112098995 [Citrus clementina][more]
XP_024037590.14.9e-2337.41uncharacterized protein LOC112097210 [Citrus clementina][more]
XP_024035599.16.4e-2340.29uncharacterized protein LOC112096407 [Citrus clementina][more]
Match NameE-valueIdentityDescription
AT4G29090.19.9e-1430.67Ribonuclease H-like superfamily protein [more]
ATMG00310.13.0e-1036.71RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33116:SF41SUBFAMILY NOT NAMEDcoord: 1..144
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 1..144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy06g012380.1Lcy06g012380.1mRNA