Lcy06g012380 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGGCCAAACAAAGTTGGAGGCTGCTAAGGAATACCAATAGTATCCTGTACAAGATCCTGAGAGGAAGATATTTCAAAGGAAGAAATTTTCTCGAAGCCCCTATAGGAAATTCGCCTTCCCTCCCGTGGAGAAGTATTTGTTGGGGTCGCAACCTCTTCCTTAAAGGCTTCAAGTGGAGGGTGGGGAATGAAAATCTTATAACTATTGATAAGGACCCTTGGATCAGTAGAGAAGGCAACCCAAAAATTTACTCAAACCTTTCCTCTCTTAAAGGCAAAAGAGTCAAGGAGCTTCTTGATGAAAACAACAATTGGAGAGAGAAGGTGATCTTTCAAGAATTCTCCCCCCAAGAGGTTTTGGACATTCTGAACATGCCGACCGGAAGTAGGGACACAAAAGATGAAATAATGTGGTATCTTGATAAGAGAGGAATATTCTCTGTCAAAAGTGTTTACAAACTCGCCATGGAAGGAATCTCCCAACAAGAAAGCTCTCAATCGGATACATCTAAGTCTACAACTCTTTGGAAGTGTTTGTGGAAATCTAATGTGTTGCCTAGATCAAAAGTTTGTGCATGGAAGATAATAAACGACATTATCCCATCCAAGGCAAACATAAAAAAAAAAGGGAGTAGATCTCAACCCTTTGTGCTCTTTTTGTAGGAAAAAACCAGAAACTTCCCATCTAATATGGGGTTGTAAATTCTCGAGAGGCCTATGGTCCAGATACATCCCTAAATTTCTCTCTTTGTTTTCTTTTTGCAGAGATGAGTGGTCGACGAAGGAATTTTGGAGCTGGATGGAATCAAATTTGAATAAAGAAGAAATATCAATCGGGATCATCATTATGTGGAAAATTTGGGAATACAGAAACCAATTATAAGCTTTCAATCAACTGCCAGCAGAGGAGATAATTCAAAACAGAATTGAAGCAAGTTTAAAGGATTGAAGTTCTTCTTACCTCAAGACCCAATCCCAAAATAGGTTGGGGAGCCATGTGAGTCAGGTGCATCGGGAGAAGCCACCACCAAACATCTGGAGAATGAACTGCGATGCCACCTGGAACGAACAAGAAGGGCGAGGAGGATTAGGGTGGGTAATGCATGACTCAGATGGATCCCTGATTTGTGGTTGTATGCATCAAATTTCAAAGAAATGGGCAATCAAATCGTTGGAGGCAAAAACAATTTTAGAAGGAATCAAGCATACCTCGAAAATGTGCAGCCAGTAAAGCATTCCCCTCGTGATCAAATCAGATGCCTTAACTGTGGTGAAGGTCCTCAATGGCGAATCAGAAGACCTCTCCGATCTGAAAACTCTCACAGATGAAATCGCCTTTAGGGCCGACCGAGCTCATTCCACTTCTTTTCGTTACTGTAATAGGCTTTTGAACACAGACGCGCACTGTGATGTGAAGAGAGCAGCTACTCTTCCCCTCTGGTCTTCTTCATCCCTCTCTTCTGGTTCTTCATTTTTTGTTCGGACAGAGGAGCCTCTCTCTCACGGGAAATGGAACAGGTCTTTTGGGCTCCCAATAACCCAAGTTGTTTTTTCCCTCTCTTTGAAGAGATTAGTGTAA ATGCTGGCCAAACAAAGTTGGAGGCTGCTAAGGAATACCAATAGTATCCTGTACAAGATCCTGAGAGGAAGATATTTCAAAGGAAGAAATTTTCTCGAAGCCCCTATAGGAAATTCGCCTTCCCTCCCGTGGAGAAGTATTTGTTGGGGTCGCAACCTCTTCCTTAAAGGCTTCAAGTGGAGGGTGGGGAATGAAAATCTTATAACTATTGATAAGGACCCTTGGATCAGTAGAGAAGGCAACCCAAAAATTTACTCAAACCTTTCCTCTCTTAAAGGCAAAAGAGTCAAGGAGCTTCTTGATGAAAACAACAATTGGAGAGAGAAGGTGATCTTTCAAGAATTCTCCCCCCAAGAGGTTTTGGACATTCTGAACATGCCGACCGGAAGTAGGGACACAAAAGATGAAATAATGTGGTTGGGGAGCCATGTGAGTCAGGTGCATCGGGAGAAGCCACCACCAAACATCTGGAGAATGAACTGCGATGCCACCTGGAACGAACAAGAAGGGCGAGGAGGATTAGGGTGGGTCCTCAATGGCGAATCAGAAGACCTCTCCGATCTGAAAACTCTCACAGATGAAATCGCCTTTAGGGCCGACCGAGCTCATTCCACTTCTTTTCGTTACTGTAATAGGCTTTTGAACACAGACGCGCACTGTGATGTGAAGAGAGCAGCTACTCTTCCCCTCTGGTCTTCTTCATCCCTCTCTTCTGGTTCTTCATTTTTTGTTCGGACAGAGGAGCCTCTCTCTCACGGGAAATGGAACAGGTCTTTTGGGCTCCCAATAACCCAAGTTGTTTTTTCCCTCTCTTTGAAGAGATTAGTGTAA ATGCTGGCCAAACAAAGTTGGAGGCTGCTAAGGAATACCAATAGTATCCTGTACAAGATCCTGAGAGGAAGATATTTCAAAGGAAGAAATTTTCTCGAAGCCCCTATAGGAAATTCGCCTTCCCTCCCGTGGAGAAGTATTTGTTGGGGTCGCAACCTCTTCCTTAAAGGCTTCAAGTGGAGGGTGGGGAATGAAAATCTTATAACTATTGATAAGGACCCTTGGATCAGTAGAGAAGGCAACCCAAAAATTTACTCAAACCTTTCCTCTCTTAAAGGCAAAAGAGTCAAGGAGCTTCTTGATGAAAACAACAATTGGAGAGAGAAGGTGATCTTTCAAGAATTCTCCCCCCAAGAGGTTTTGGACATTCTGAACATGCCGACCGGAAGTAGGGACACAAAAGATGAAATAATGTGGTTGGGGAGCCATGTGAGTCAGGTGCATCGGGAGAAGCCACCACCAAACATCTGGAGAATGAACTGCGATGCCACCTGGAACGAACAAGAAGGGCGAGGAGGATTAGGGTGGGTCCTCAATGGCGAATCAGAAGACCTCTCCGATCTGAAAACTCTCACAGATGAAATCGCCTTTAGGGCCGACCGAGCTCATTCCACTTCTTTTCGTTACTGTAATAGGCTTTTGAACACAGACGCGCACTGTGATGTGAAGAGAGCAGCTACTCTTCCCCTCTGGTCTTCTTCATCCCTCTCTTCTGGTTCTTCATTTTTTGTTCGGACAGAGGAGCCTCTCTCTCACGGGAAATGGAACAGGTCTTTTGGGCTCCCAATAACCCAAGTTGTTTTTTCCCTCTCTTTGAAGAGATTAGTGTAA MLAKQSWRLLRNTNSILYKILRGRYFKGRNFLEAPIGNSPSLPWRSICWGRNLFLKGFKWRVGNENLITIDKDPWISREGNPKIYSNLSSLKGKRVKELLDENNNWREKVIFQEFSPQEVLDILNMPTGSRDTKDEIMWLGSHVSQVHREKPPPNIWRMNCDATWNEQEGRGGLGWVLNGESEDLSDLKTLTDEIAFRADRAHSTSFRYCNRLLNTDAHCDVKRAATLPLWSSSSLSSGSSFFVRTEEPLSHGKWNRSFGLPITQVVFSLSLKRLV Homology
BLAST of Lcy06g012380 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.2e-09 Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0
BLAST of Lcy06g012380 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.0e-26 Identity = 62/139 (44.60%), Postives = 85/139 (61.15%), Query Frame = 0
BLAST of Lcy06g012380 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 2.5e-25 Identity = 59/140 (42.14%), Postives = 86/140 (61.43%), Query Frame = 0
BLAST of Lcy06g012380 vs. ExPASy TrEMBL
Match: A0A803PM68 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.1e-24 Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 0
BLAST of Lcy06g012380 vs. ExPASy TrEMBL
Match: A0A803P9P5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-23 Identity = 59/141 (41.84%), Postives = 81/141 (57.45%), Query Frame = 0
BLAST of Lcy06g012380 vs. ExPASy TrEMBL
Match: A0A6J1CUD6 (uncharacterized protein LOC111014663 OS=Momordica charantia OX=3673 GN=LOC111014663 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 6.9e-23 Identity = 61/132 (46.21%), Postives = 76/132 (57.58%), Query Frame = 0
BLAST of Lcy06g012380 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia]) HSP 1 Score: 130.6 bits (327), Expect = 2.1e-26 Identity = 62/139 (44.60%), Postives = 85/139 (61.15%), Query Frame = 0
BLAST of Lcy06g012380 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia]) HSP 1 Score: 125.9 bits (315), Expect = 5.2e-25 Identity = 59/140 (42.14%), Postives = 86/140 (61.43%), Query Frame = 0
BLAST of Lcy06g012380 vs. NCBI nr
Match: XP_024041860.1 (uncharacterized protein LOC112098995 [Citrus clementina]) HSP 1 Score: 120.2 bits (300), Expect = 2.9e-23 Identity = 53/146 (36.30%), Postives = 86/146 (58.90%), Query Frame = 0
BLAST of Lcy06g012380 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina]) HSP 1 Score: 119.4 bits (298), Expect = 4.9e-23 Identity = 52/139 (37.41%), Postives = 82/139 (58.99%), Query Frame = 0
BLAST of Lcy06g012380 vs. NCBI nr
Match: XP_024035599.1 (uncharacterized protein LOC112096407 [Citrus clementina]) HSP 1 Score: 119.0 bits (297), Expect = 6.4e-23 Identity = 56/139 (40.29%), Postives = 80/139 (57.55%), Query Frame = 0
BLAST of Lcy06g012380 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 75.1 bits (183), Expect = 9.9e-14 Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = 0
BLAST of Lcy06g012380 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 63.5 bits (153), Expect = 3.0e-10 Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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