Lcy06g010020 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g010020
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	PMD domain-containing protein
Location	Chr06: 10502738 .. 10503750 (-)
RNA-Seq Expression	Lcy06g010020
Synteny	Lcy06g010020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAAAAAGTCCAAACAACCATCAGTATGTGAAGATGAATTTTTTTATGGAGTTCCTAGCGCATCACAATTTCTTGAACTCCCTACACCACTAGTAAGTATTTTCATTCCCTCTTCATTATAATATTTTACTATTATTATTATCATTATTACTTACACTTTTTTTTGCAGTCACCTTTAAATGGTCCCCTTATAGAAGTCAAAGGGCATCATAGTCCTCCTTCTTTTGTAAGTCCAGACGCTTTTGACTCTGTAGCTGTGCGTGTGGGCAATTCCAAAGCGCCAATGGATAGAGTTGTAATTCAATCTTGTCATCCTGTAATTGATGAAATTCCTAGACAAAAGAAGACAACAACCCATGCAGCTGCGTCTGCGATCTCTGATTATTGTGCTGACGATGCGATTTCCAACTATAGGAAATAGGTTGCCCTTACCCTGTGGGAGAGCATACACCAGAAGATCATACGCACTCCCTTCGAAAAAATACCTCGTCTTGAACAAGAGACAGTCAAAATACTTCAAGCAATTTCTGAGGCCCGTGCACCCGACTTAGATCCTCTTAAAGAAATTGTAAGTGCGTATTTCAAGAAGGTAGATAAGTATAACCAGCTGCAGTCGTCATTTTCTTCTCAATTAACTTTGGAGAGTAAGAATAGCCAATTGGAAGAGACTAAATTTAGTTTGGAGAAGATACTATACAGTGAAAGTGAACTACTCACAGCGAAAGGTTCACTTCAGCAACAACATCTGCAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAGGCTTGAAGCTGTGAAAGCTAAGCGAGGTGAGATTTCTAAGTCGATTGTCGAGAAGGAGGATCTTTTAAAACAACATCAATTCGAGGCTTCCAAACTACGAGGAACTATAAGTAGTATTGAAAATGCCACTGTTCTTACTGATGCTGATGCAAAAACTTTGACGATACTTCGTGGAATGTTAGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGATACCGTGA

mRNA sequence

ATGTCTAAAAAGTCCAAACAACCATCAGTATGTGAAGATGAATTTTTTTATGGAGTTCCTAGCGCATCACAATTTCTTGAACTCCCTACACCACTATCACCTTTAAATGGTCCCCTTATAGAAGTCAAAGGGCATCATAGTCCTCCTTCTTTTGTAAGTCCAGACGCTTTTGACTCTGTAGCTGTGCGTGTGGGCAATTCCAAAGCGCCAATGGATAGAGTTGTAATTCAATCTTGTCATCCTGTTGCCCTTACCCTGTGGGAGAGCATACACCAGAAGATCATACGCACTCCCTTCGAAAAAATACCTCGTCTTGAACAAGAGACAGTCAAAATACTTCAAGCAATTTCTGAGGCCCGTGCACCCGACTTAGATCCTCTTAAAGAAATTGTAAGTGCGTATTTCAAGAAGGTAGATAAGTATAACCAGCTGCAGTCGTCATTTTCTTCTCAATTAACTTTGGAGAGTAAGAATAGCCAATTGGAAGAGACTAAATTTAGTTTGGAGAAGATACTATACAGTGAAAGTGAACTACTCACAGCGAAAGGTTCACTTCAGCAACAACATCTGCAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAGGCTTGAAGCTGTGAAAGCTAAGCGAGGTGAGATTTCTAAGTCGATTGTCGAGAAGGAGGATCTTTTAAAACAACATCAATTCGAGGCTTCCAAACTACGAGGAACTATAAGTAGTATTGAAAATGCCACTGTTCTTACTGATGCTGATGCAAAAACTTTGACGATACTTCGTGGAATGTTAGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGATACCGTGA

Coding sequence (CDS)

ATGTCTAAAAAGTCCAAACAACCATCAGTATGTGAAGATGAATTTTTTTATGGAGTTCCTAGCGCATCACAATTTCTTGAACTCCCTACACCACTATCACCTTTAAATGGTCCCCTTATAGAAGTCAAAGGGCATCATAGTCCTCCTTCTTTTGTAAGTCCAGACGCTTTTGACTCTGTAGCTGTGCGTGTGGGCAATTCCAAAGCGCCAATGGATAGAGTTGTAATTCAATCTTGTCATCCTGTTGCCCTTACCCTGTGGGAGAGCATACACCAGAAGATCATACGCACTCCCTTCGAAAAAATACCTCGTCTTGAACAAGAGACAGTCAAAATACTTCAAGCAATTTCTGAGGCCCGTGCACCCGACTTAGATCCTCTTAAAGAAATTGTAAGTGCGTATTTCAAGAAGGTAGATAAGTATAACCAGCTGCAGTCGTCATTTTCTTCTCAATTAACTTTGGAGAGTAAGAATAGCCAATTGGAAGAGACTAAATTTAGTTTGGAGAAGATACTATACAGTGAAAGTGAACTACTCACAGCGAAAGGTTCACTTCAGCAACAACATCTGCAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAGGCTTGAAGCTGTGAAAGCTAAGCGAGGTGAGATTTCTAAGTCGATTGTCGAGAAGGAGGATCTTTTAAAACAACATCAATTCGAGGCTTCCAAACTACGAGGAACTATAAGTAGTATTGAAAATGCCACTGTTCTTACTGATGCTGATGCAAAAACTTTGACGATACTTCGTGGAATGTTAGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGATACCGTGA

Protein sequence

MSKKSKQPSVCEDEFFYGVPSASQFLELPTPLSPLNGPLIEVKGHHSPPSFVSPDAFDSVAVRVGNSKAPMDRVVIQSCHPVALTLWESIHQKIIRTPFEKIPRLEQETVKILQAISEARAPDLDPLKEIVSAYFKKVDKYNQLQSSFSSQLTLESKNSQLEETKFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEAVKAKRGEISKSIVEKEDLLKQHQFEASKLRGTISSIENATVLTDADAKTLTILRGMLEDAQEELKNYKWIP

Homology

[Close]

BLAST of Lcy06g010020 vs. ExPASy TrEMBL
Match: A0A5A7V3X5 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00140 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 7.9e-27
Identity = 80/241 (33.20%), Postives = 135/241 (56.02%), Query Frame = 0


Query: 38  PLIEVKGHHSPPSFVSPDAFDSVAVRVGNSKAPM----DRVVIQSCHPVALTLWESIHQK 97
           PL +V   H+P  + S    D+    +  S  P     ++VV+      AL +WE I  K
Sbjct: 250 PLQKVSSTHAPLKY-SESPLDASNRHITRSPEPSQWVGEKVVLNFFKKTALCMWEDIQDK 309

Query: 98  IIRTPFEKIPRLEQETVKILQAISEARAPDLDPLKEIVSAYFKKVDKYNQLQSSFSSQLT 157
           I+RTPFE IPRL  E   +L  I +     L PL+E +++Y K+VD +N +QSS+S+QL 
Sbjct: 310 IMRTPFEYIPRLRPEIATVLSGIEKIHTNGLTPLEEYLNSYLKRVDNFNDVQSSYSAQLL 369

Query: 158 LESKNSQLEETKFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEAVKAKRGEI 217
              K  QL+E   ++E+ L    +L      +Q++ +Q   E++ELE RL+++ A+  ++
Sbjct: 370 STDKARQLDEKTSAIEEALTLMEKLREDANVIQERAMQLSLEKKELERRLQSLNAESEQL 429

Query: 218 SKSIVEKEDLLKQHQFEASKLRGTISSIENATVLTDADAKTLTILRGMLEDAQEELKNYK 275
           S    EK + + Q + E +KL+  ++++E    +T+   + L ++R  +E A+EE KN+K
Sbjct: 430 SILSCEKIEAIYQQELEVAKLQDEVNTLEGTPAITEEVIEALAMVRRSMEAAREEFKNFK 489

[Close]

BLAST of Lcy06g010020 vs. ExPASy TrEMBL
Match: A0A5A7V4F4 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004890 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 5.6e-25
Identity = 88/278 (31.65%), Postives = 148/278 (53.24%), Query Frame = 0


Query: 2   SKKSKQPSVCEDEFFYGVPSASQFLELPTPLSP----LNGPLIEVKGHHSPPSFVSPDAF 61
           +++S +PS   +E   G  +  +  +L +P S     L   L +V   H+P S +   AF
Sbjct: 605 AEQSLRPSALLEEIRRGKMTVGR-KDLESPSSKEGVCLKASLQKVSSAHAPLSELPLGAF 664

Query: 62  DSVAVRVGN-SKAPMDRVVIQSCHPVALTLWESIHQKIIRTPFEKIPRLEQETVKILQAI 121
           ++   R    S+   ++VV       AL +WE I  KI+RTPFE IPRL  E   +L  I
Sbjct: 665 NNQTARNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRPEIATVLSGI 724

Query: 122 SEARAPDLDPLKEIVSAYFKKVDKYNQLQSSFSSQLTLESKNSQLEETKFSLEKILYSES 181
            +  A  L  L+E +++Y K+VD +N +QSS S+QL    K  QL E   ++++ L    
Sbjct: 725 EKIHADGLTSLEEYLNSYLKRVDNFNDVQSSHSTQLLSMDKARQLNEKTSAIKEALTLVK 784

Query: 182 ELLTAKGSLQQQHLQALREEEELEARLEAVKAKRGEISKSIVEKEDLLKQHQFEASKLRG 241
           +L      +Q++  +   E +ELE RL ++ A+  ++S    EK + + Q + E +KLR 
Sbjct: 785 QLRGDAKVIQERIAELSLERKELEKRLRSINAESEQLSILSCEKAEAIDQQELEVAKLRD 844

Query: 242 TISSIENATVLTDADAKTLTILRGMLEDAQEELKNYKW 275
            ++++E+   +T+   + L  +R  +E A+EE KN+KW
Sbjct: 845 EVNTLESTPAITEEAIEALATVRQSMEAAREEFKNFKW 881

[Close]

BLAST of Lcy06g010020 vs. ExPASy TrEMBL
Match: A0A5D3BRA8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00620 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 5.6e-25
Identity = 88/278 (31.65%), Postives = 148/278 (53.24%), Query Frame = 0


Query: 2   SKKSKQPSVCEDEFFYGVPSASQFLELPTPLSP----LNGPLIEVKGHHSPPSFVSPDAF 61
           +++S +PS   +E   G  +  +  +L +P S     L   L +V   H+P S +   AF
Sbjct: 605 AEQSLRPSALLEEIRRGKMTVGR-KDLESPSSKEGVCLKASLQKVSSAHAPLSELPLGAF 664

Query: 62  DSVAVRVGN-SKAPMDRVVIQSCHPVALTLWESIHQKIIRTPFEKIPRLEQETVKILQAI 121
           ++   R    S+   ++VV       AL +WE I  KI+RTPFE IPRL  E   +L  I
Sbjct: 665 NNQTARNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRPEIATVLSGI 724

Query: 122 SEARAPDLDPLKEIVSAYFKKVDKYNQLQSSFSSQLTLESKNSQLEETKFSLEKILYSES 181
            +  A  L  L+E +++Y K+VD +N +QSS S+QL    K  QL E   ++++ L    
Sbjct: 725 EKIHADGLTSLEEYLNSYLKRVDNFNDVQSSHSTQLLSMDKARQLNEKTSAIKEALTLVK 784

Query: 182 ELLTAKGSLQQQHLQALREEEELEARLEAVKAKRGEISKSIVEKEDLLKQHQFEASKLRG 241
           +L      +Q++  +   E +ELE RL ++ A+  ++S    EK + + Q + E +KLR 
Sbjct: 785 QLRGDAKVIQERIAELSLERKELEKRLRSINAESEQLSILSCEKAEAIDQQELEVAKLRD 844

Query: 242 TISSIENATVLTDADAKTLTILRGMLEDAQEELKNYKW 275
            ++++E+   +T+   + L  +R  +E A+EE KN+KW
Sbjct: 845 EVNTLESTPAITEEAIEALATVRQSMEAAREEFKNFKW 881

[Close]

BLAST of Lcy06g010020 vs. ExPASy TrEMBL
Match: A0A5A7UJE9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2750G00310 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-24
Identity = 85/261 (32.57%), Postives = 132/261 (50.57%), Query Frame = 0


Query: 28  LPTPLSPLNGPLIEVKGHHSPPSFVSPDAFDSVAVRVGNSKAPMDRVVIQSCHPVA---- 87
           L  P SPLN  L  +    S  S   P A DSV   VG    P+ +   QS  P A    
Sbjct: 101 LGVPDSPLNDCLEGLIELGSDESLTGPYAVDSVIEEVGTLNTPVSKPAEQSLRPSALLKE 160

Query: 88  ----------LTLWESIHQKIIRTPFEKIPRLEQETVKILQAISEARAPDLDPLKEIVSA 147
                     L +WE I  KI RTPFE I RL  +   +L  I +     L PL+E +++
Sbjct: 161 IRRGKMKKTTLCMWEDIQDKIRRTPFEYIRRLRPKIATVLSGIKKIHVDSLTPLEEYLNS 220

Query: 148 YFKKVDKYNQLQSSFSSQLTLESKNSQLEETKFSLEKILYSESELLTAKGSLQQQHLQAL 207
           Y K+VD +N +QSS+S+QL    K  QL+E    +++ L    +L      +Q+  +Q  
Sbjct: 221 YLKRVDNFNDVQSSYSAQLLSTDKARQLDEKTSVIKEALTLMDQLRGDTKVIQEIVVQLS 280

Query: 208 REEEELEARLEAVKAKRGEISKSIVEKEDLLKQHQFEASKLRGTISSIENATVLTDADAK 267
            E +ELE RL+++  +  ++S    EK +++ Q + E +KL   ++++E+   +T+   +
Sbjct: 281 LENKELERRLQSINVEFEQLSILPCEKAEVIDQQKLEVAKLHDEVNTLESTPPITEEAIE 340

Query: 268 TLTILRGMLEDAQEELKNYKW 275
            L  +R  +E A EE KN+KW
Sbjct: 341 VLARVRKSMEVAHEEFKNFKW 361

[Close]

BLAST of Lcy06g010020 vs. ExPASy TrEMBL
Match: A0A5A7VAY8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001930 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-24
Identity = 79/241 (32.78%), Postives = 129/241 (53.53%), Query Frame = 0


Query: 35  LNGPLIEVKGHHSPPSFVSPDAFDSVAVRVGN-SKAPMDRVVIQSCHPVALTLWESIHQK 94
           L   L +V   H+P S +   AF+    R    S+   ++VV       AL +WE I  K
Sbjct: 134 LKASLQKVSSAHAPLSELPLGAFNKQTARNPEPSQWVGEKVVSNFFQKTALCMWEDIQDK 193

Query: 95  IIRTPFEKIPRLEQETVKILQAISEARAPDLDPLKEIVSAYFKKVDKYNQLQSSFSSQLT 154
           I+RTPFE IPRL  E   +L  I +  A  L  L+E +++Y K+VD +N +QSS+S+ L 
Sbjct: 194 IMRTPFEYIPRLRLEIATVLSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAHLL 253

Query: 155 LESKNSQLEETKFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEAVKAKRGEI 214
              K  QL E   ++++ L    +L      +Q++  +   E +ELE RL ++ A+  ++
Sbjct: 254 STDKARQLNEKTSAIKEALTLVKQLRGDAKVIQERTAELSLERKELEKRLRSINAESEQL 313

Query: 215 SKSIVEKEDLLKQHQFEASKLRGTISSIENATVLTDADAKTLTILRGMLEDAQEELKNYK 274
           S    EK + + Q + E SKL+  I+++E+   +T+   + L  +R  +E  +EE KN+K
Sbjct: 314 SILSCEKAEAINQQELEVSKLQDEINTLESTPAITEEAIEALATVRQSMEAVREEFKNFK 373

[Close]

BLAST of Lcy06g010020 vs. NCBI nr
Match: KAA0060431.1 (hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa] >TYK18520.1 hypothetical protein E5676_scaffold119G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-26
Identity = 80/241 (33.20%), Postives = 135/241 (56.02%), Query Frame = 0


Query: 38  PLIEVKGHHSPPSFVSPDAFDSVAVRVGNSKAPM----DRVVIQSCHPVALTLWESIHQK 97
           PL +V   H+P  + S    D+    +  S  P     ++VV+      AL +WE I  K
Sbjct: 250 PLQKVSSTHAPLKY-SESPLDASNRHITRSPEPSQWVGEKVVLNFFKKTALCMWEDIQDK 309

Query: 98  IIRTPFEKIPRLEQETVKILQAISEARAPDLDPLKEIVSAYFKKVDKYNQLQSSFSSQLT 157
           I+RTPFE IPRL  E   +L  I +     L PL+E +++Y K+VD +N +QSS+S+QL 
Sbjct: 310 IMRTPFEYIPRLRPEIATVLSGIEKIHTNGLTPLEEYLNSYLKRVDNFNDVQSSYSAQLL 369

Query: 158 LESKNSQLEETKFSLEKILYSESELLTAKGSLQQQHLQALREEEELEARLEAVKAKRGEI 217
              K  QL+E   ++E+ L    +L      +Q++ +Q   E++ELE RL+++ A+  ++
Sbjct: 370 STDKARQLDEKTSAIEEALTLMEKLREDANVIQERAMQLSLEKKELERRLQSLNAESEQL 429

Query: 218 SKSIVEKEDLLKQHQFEASKLRGTISSIENATVLTDADAKTLTILRGMLEDAQEELKNYK 275
           S    EK + + Q + E +KL+  ++++E    +T+   + L ++R  +E A+EE KN+K
Sbjct: 430 SILSCEKIEAIYQQELEVAKLQDEVNTLEGTPAITEEVIEALAMVRRSMEAAREEFKNFK 489

[Close]

BLAST of Lcy06g010020 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-26
Identity = 106/337 (31.45%), Postives = 165/337 (48.96%), Query Frame = 0


Query: 3    KKSKQPSVCEDEFFYGVPSASQFLELPTPL---------------SPL-------NGPLI 62
            KK  + S+ ++E    VP A+QF ++P+P+               SPL       N  L 
Sbjct: 667  KKPNKQSIDDEESPIRVPDAAQFFDVPSPMVSFRLPFYLFIYCIFSPLLLLFLVVNIILQ 726

Query: 63   EVKGHH------SPPSFVSPDAFDSVAVRVGNSKAPMDRVVIQSCHPV------------ 122
               G H      +  S  + +  + V    GNSK P+   ++ +C PV            
Sbjct: 727  SSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTE 786

Query: 123  -----------------------ALTLWESIHQKIIRTPFEKIPRLEQETVKILQAISEA 182
                                   A+TLWE++ QKIIRTPFE++  LE E  KI  AI+ +
Sbjct: 787  PITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPEMHKIFDAIATS 846

Query: 183  RAPDLDPLKEIVSAYFKKVDKYNQLQSSFSSQLTLESKNSQLEETKFSLEKILYSESELL 242
             + +L  L+E+V+ YF+ V+ +NQ+ SSF  Q T   K+ QL E K  ++ +   E+ +L
Sbjct: 847  GSDNLIVLRELVNGYFQGVENHNQIHSSFLLQST---KDVQLTEAKGFVKTLRVDENRIL 906

Query: 243  TAKGSLQQQHLQALREEEELEARLEAVKAKRGEISKSIVEKEDLLKQHQFEASKLRGTIS 277
                + +++  +   +E +LEA+L+ V+A+  ++S  I + +  LKQ Q E SK    I 
Sbjct: 907  AETNTAKRRLTRLSAKEAKLEAKLKMVRAESAKLSGIIFKNDLELKQKQHEISKTCEEID 966

[Close]

BLAST of Lcy06g010020 vs. NCBI nr
Match: TYK02261.1 (hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-24
Identity = 88/278 (31.65%), Postives = 148/278 (53.24%), Query Frame = 0


Query: 2   SKKSKQPSVCEDEFFYGVPSASQFLELPTPLSP----LNGPLIEVKGHHSPPSFVSPDAF 61
           +++S +PS   +E   G  +  +  +L +P S     L   L +V   H+P S +   AF
Sbjct: 605 AEQSLRPSALLEEIRRGKMTVGR-KDLESPSSKEGVCLKASLQKVSSAHAPLSELPLGAF 664

Query: 62  DSVAVRVGN-SKAPMDRVVIQSCHPVALTLWESIHQKIIRTPFEKIPRLEQETVKILQAI 121
           ++   R    S+   ++VV       AL +WE I  KI+RTPFE IPRL  E   +L  I
Sbjct: 665 NNQTARNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRPEIATVLSGI 724

Query: 122 SEARAPDLDPLKEIVSAYFKKVDKYNQLQSSFSSQLTLESKNSQLEETKFSLEKILYSES 181
            +  A  L  L+E +++Y K+VD +N +QSS S+QL    K  QL E   ++++ L    
Sbjct: 725 EKIHADGLTSLEEYLNSYLKRVDNFNDVQSSHSTQLLSMDKARQLNEKTSAIKEALTLVK 784

Query: 182 ELLTAKGSLQQQHLQALREEEELEARLEAVKAKRGEISKSIVEKEDLLKQHQFEASKLRG 241
           +L      +Q++  +   E +ELE RL ++ A+  ++S    EK + + Q + E +KLR 
Sbjct: 785 QLRGDAKVIQERIAELSLERKELEKRLRSINAESEQLSILSCEKAEAIDQQELEVAKLRD 844

Query: 242 TISSIENATVLTDADAKTLTILRGMLEDAQEELKNYKW 275
            ++++E+   +T+   + L  +R  +E A+EE KN+KW
Sbjct: 845 EVNTLESTPAITEEAIEALATVRQSMEAAREEFKNFKW 881

[Close]

BLAST of Lcy06g010020 vs. NCBI nr
Match: KAA0060611.1 (hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa])

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-24
Identity = 88/278 (31.65%), Postives = 148/278 (53.24%), Query Frame = 0


Query: 2   SKKSKQPSVCEDEFFYGVPSASQFLELPTPLSP----LNGPLIEVKGHHSPPSFVSPDAF 61
           +++S +PS   +E   G  +  +  +L +P S     L   L +V   H+P S +   AF
Sbjct: 605 AEQSLRPSALLEEIRRGKMTVGR-KDLESPSSKEGVCLKASLQKVSSAHAPLSELPLGAF 664

Query: 62  DSVAVRVGN-SKAPMDRVVIQSCHPVALTLWESIHQKIIRTPFEKIPRLEQETVKILQAI 121
           ++   R    S+   ++VV       AL +WE I  KI+RTPFE IPRL  E   +L  I
Sbjct: 665 NNQTARNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRPEIATVLSGI 724

Query: 122 SEARAPDLDPLKEIVSAYFKKVDKYNQLQSSFSSQLTLESKNSQLEETKFSLEKILYSES 181
            +  A  L  L+E +++Y K+VD +N +QSS S+QL    K  QL E   ++++ L    
Sbjct: 725 EKIHADGLTSLEEYLNSYLKRVDNFNDVQSSHSTQLLSMDKARQLNEKTSAIKEALTLVK 784

Query: 182 ELLTAKGSLQQQHLQALREEEELEARLEAVKAKRGEISKSIVEKEDLLKQHQFEASKLRG 241
           +L      +Q++  +   E +ELE RL ++ A+  ++S    EK + + Q + E +KLR 
Sbjct: 785 QLRGDAKVIQERIAELSLERKELEKRLRSINAESEQLSILSCEKAEAIDQQELEVAKLRD 844

Query: 242 TISSIENATVLTDADAKTLTILRGMLEDAQEELKNYKW 275
            ++++E+   +T+   + L  +R  +E A+EE KN+KW
Sbjct: 845 EVNTLESTPAITEEAIEALATVRQSMEAAREEFKNFKW 881

[Close]

BLAST of Lcy06g010020 vs. NCBI nr
Match: KAA0054406.1 (hypothetical protein E6C27_scaffold24G001560 [Cucumis melo var. makuwa] >TYJ96833.1 hypothetical protein E5676_scaffold2750G00310 [Cucumis melo var. makuwa])

HSP 1 Score: 122.5 bits (306), Expect = 5.8e-24
Identity = 85/261 (32.57%), Postives = 132/261 (50.57%), Query Frame = 0


Query: 28  LPTPLSPLNGPLIEVKGHHSPPSFVSPDAFDSVAVRVGNSKAPMDRVVIQSCHPVA---- 87
           L  P SPLN  L  +    S  S   P A DSV   VG    P+ +   QS  P A    
Sbjct: 101 LGVPDSPLNDCLEGLIELGSDESLTGPYAVDSVIEEVGTLNTPVSKPAEQSLRPSALLKE 160

Query: 88  ----------LTLWESIHQKIIRTPFEKIPRLEQETVKILQAISEARAPDLDPLKEIVSA 147
                     L +WE I  KI RTPFE I RL  +   +L  I +     L PL+E +++
Sbjct: 161 IRRGKMKKTTLCMWEDIQDKIRRTPFEYIRRLRPKIATVLSGIKKIHVDSLTPLEEYLNS 220

Query: 148 YFKKVDKYNQLQSSFSSQLTLESKNSQLEETKFSLEKILYSESELLTAKGSLQQQHLQAL 207
           Y K+VD +N +QSS+S+QL    K  QL+E    +++ L    +L      +Q+  +Q  
Sbjct: 221 YLKRVDNFNDVQSSYSAQLLSTDKARQLDEKTSVIKEALTLMDQLRGDTKVIQEIVVQLS 280

Query: 208 REEEELEARLEAVKAKRGEISKSIVEKEDLLKQHQFEASKLRGTISSIENATVLTDADAK 267
            E +ELE RL+++  +  ++S    EK +++ Q + E +KL   ++++E+   +T+   +
Sbjct: 281 LENKELERRLQSINVEFEQLSILPCEKAEVIDQQKLEVAKLHDEVNTLESTPPITEEAIE 340

Query: 268 TLTILRGMLEDAQEELKNYKW 275
            L  +R  +E A EE KN+KW
Sbjct: 341 VLARVRKSMEVAHEEFKNFKW 361

The following BLAST results are available for this feature:

BLAST of Lcy06g010020 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g010020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V3X5	7.9e-27	33.20	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7V4F4	5.6e-25	31.65	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3BRA8	5.6e-25	31.65	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7UJE9	2.8e-24	32.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VAY8	2.8e-24	32.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Lcy06g010020 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060431.1	1.6e-26	33.20	hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa] >TYK1852...	[more]
XP_031745312.1	1.6e-26	31.45	uncharacterized protein LOC116405439 [Cucumis sativus]	[more]
TYK02261.1	1.2e-24	31.65	hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]	[more]
KAA0060611.1	1.2e-24	31.65	hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]	[more]
KAA0054406.1	5.8e-24	32.57	hypothetical protein E6C27_scaffold24G001560 [Cucumis melo var. makuwa] >TYJ9683...	[more]

BLAST of Lcy06g010020 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 182..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g010020.1	Lcy06g010020.1	mRNA