Homology
BLAST of Lcy06g009850 vs. ExPASy Swiss-Prot
Match:
Q3EDA9 (Putative pentatricopeptide repeat-containing protein At1g16830 OS=Arabidopsis thaliana OX=3702 GN=At1g16830 PE=3 SV=2)
HSP 1 Score: 424.1 bits (1089), Expect = 2.9e-117
Identity = 216/535 (40.37%), Postives = 335/535 (62.62%), Query Frame = 0
Query: 60 LTNELAHTTLLNCPSDLVALSFFLWCAKQPNFFHNAAAFDYMVGVVSRLMKRYETVNEIL 119
LT++ ++ L P+DL L+FF WCAKQ N+FH+ AFD+MVGVV +L + Y +++ I+
Sbjct: 37 LTHDNVYSCLRESPADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRII 96
Query: 120 GGLESVGNVTKAQTFLLLLRIYWHGGMYELVFEAFDHMGHCGFTPNTFARNVIMDVLFKV 179
L+ G K + FLLLL I+W G +Y+ E + M GF PNT A N++MDV FK+
Sbjct: 97 ERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKL 156
Query: 180 GRADVALKVFKETLLPNFLTFNIVL---CNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFE 239
+ AL++F+ NF +F+I L C+ DL+G+K + M+ G+YPN F
Sbjct: 157 NVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFG 216
Query: 240 VVLNCFCKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKL 299
+L C+ G ++EA+QV+G+M GIS+SVN+W+++V GF R A L KM ++
Sbjct: 217 QILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQI 276
Query: 300 GCSPNIVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEA 359
GCSPN+VTYT+LIKG++D +V +AF VLS ++SEG +PD VL N++I + ++GRF+EA
Sbjct: 277 GCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEA 336
Query: 360 LSIFLSFDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVDGLFVEVDLVACNSLLSYLGK 419
+F S +K+ ++PD YTF+S+L++LCLS +F L+P++ G+ + DLV N L + K
Sbjct: 337 RKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSK 396
Query: 420 AGFPSLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHLYNGILLNYTGVDAHI 479
G+ S AL++ M K D Y+ L+ LC A+ +Y I+ +DAH
Sbjct: 397 IGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHF 456
Query: 480 HTVIMGGLIKAGKCHSAIRVFRKILLEENSLDIISYSVAIRGLLKVGRDTEACNLYNDMK 539
H+ I+ LI+ GK ++A+ +F++ +LE+ LD++SY+VAI+GL++ R EA +L DMK
Sbjct: 457 HSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMK 516
Query: 540 EAGINPNAHICNVLLSSFCKERNFESVKHMLQEMIDLRIELSCTNFFRLCNAICR 592
E GI PN ++S CKE+ E V+ +L+E I +EL F++ + + R
Sbjct: 517 EGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSR 571
BLAST of Lcy06g009850 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 180.3 bits (456), Expect = 7.4e-44
Identity = 138/557 (24.78%), Postives = 257/557 (46.14%), Query Frame = 0
Query: 68 TLLNCPSDLVALSFFLWCAKQPNFFHNAAAFDYMVGVVSRLMKRYETVNEILGGLESVGN 127
+L + P D AL F +K+PNF A ++ ++ + R ++ + +IL ++S
Sbjct: 56 SLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGR-SGSFDDMKKILEDMKSSRC 115
Query: 128 VTKAQTFLLLLRIYWHGGMYELVFEAFDHM-GHCGFTPNTFARNVIMDVLFKVGRADVA- 187
TFL+L+ Y + + + D M G P+T N ++++L +
Sbjct: 116 EMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVE 175
Query: 188 ---LKVFKETLLPNFLTFNIVLCNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFEVVLNCF 247
K+ + P+ TFN+++ L + L M G P+ TF V+ +
Sbjct: 176 ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 235
Query: 248 CKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKL-GCSPN 307
+ G L A ++ M FG S S ++V GF + R DA + +++M G P+
Sbjct: 236 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 295
Query: 308 IVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEALSIFL 367
T+ TL+ G A V A ++ ++ EG+ PD YN +I L K+G EA+ +
Sbjct: 296 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 355
Query: 368 SFDKQNILPDSYTFSSLLNTLCLSKRF---FLLPKLVDGLFVEVDLVACNSLLSYLGKAG 427
++ P++ T+++L++TLC + L +++ + D+ NSL+ L
Sbjct: 356 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 415
Query: 428 FPSLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHLYNGILLNYTGVDAHIHT 487
+A+EL++EM KG PD+++ ++ LC ++DEA+++ + L+ +
Sbjct: 416 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 475
Query: 488 VIMGGLIKAGKCHSAIRVFRKILLEENSLDIISYSVAIRGLLKVGRDTEACNLYNDMKEA 547
++ G KA K A +F ++ + S + ++Y+ I GL K R +A L + M
Sbjct: 476 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 535
Query: 548 GINPNAHICNVLLSSFCKERNFESVKHMLQEMIDLRIELSCTNFFRLCNAICRSSYNYHL 607
G P+ + N LL+ FC+ + + ++Q M E + L + +C++ +
Sbjct: 536 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG-RVEV 595
Query: 608 VVYLL--IEMKDLELLP 614
LL I+MK + L P
Sbjct: 596 ASKLLRSIQMKGINLTP 610
BLAST of Lcy06g009850 vs. ExPASy Swiss-Prot
Match:
Q3ECK2 (Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62680 PE=2 SV=2)
HSP 1 Score: 174.1 bits (440), Expect = 5.3e-42
Identity = 108/417 (25.90%), Postives = 210/417 (50.36%), Query Frame = 0
Query: 164 PNTFARNVIMDVLFKVGRADVALKVFKET----LLPNFLTFNIVL---CNLSKIKDLIGI 223
P+ N ++ + K+ + DV + + K+ + + TFNIV+ C ++ + I
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 224 KDAFRCMLRMGYYPNPGTFEVVLNCFCKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDG 283
ML++GY P+ T ++N FC+ R+++A ++ M G + + ++D
Sbjct: 143 LGK---MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 202
Query: 284 FRRLHRTADASSLVKKMEKLGCSPNIVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPD 343
+ R DA K++E+ G PN+VTYT L+ G ++ SDA +LS + + +P+
Sbjct: 203 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 262
Query: 344 CVLYNVLIDSLAKIGRFDEALSIFLSFDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVD 403
+ Y+ L+D+ K G+ EA +F + +I PD T+SSL+N LCL R ++ D
Sbjct: 263 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 322
Query: 404 GLFVE---VDLVACNSLLSYLGKAGFPSLALELYDEMLDKGLMPDKYSVLGVLTGLCESR 463
+ + D+V+ N+L++ KA ++L+ EM +GL+ + + ++ G ++
Sbjct: 323 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 382
Query: 464 RIDEAVHLYNGILLNYTGVDAHIHTVIMGGLIKAGKCHSAIRVFRKILLEENSLDIISYS 523
+D+A ++ + D + +++GGL G+ A+ +F + E LDI++Y+
Sbjct: 383 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 442
Query: 524 VAIRGLLKVGRDTEACNLYNDMKEAGINPNAHICNVLLSSFCKERNFESVKHMLQEM 571
IRG+ K G+ EA +L+ + G+ P+ ++S C + V+ + +M
Sbjct: 443 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
BLAST of Lcy06g009850 vs. ExPASy Swiss-Prot
Match:
Q9SI78 (Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana OX=3702 GN=At1g62720 PE=2 SV=1)
HSP 1 Score: 172.6 bits (436), Expect = 1.5e-41
Identity = 110/423 (26.00%), Postives = 204/423 (48.23%), Query Frame = 0
Query: 183 DVALKVFKETLLPNFLTFNIVLCNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFEVVLNCF 242
D+ K+ + LP+ + F+ VL ++K K+ + F M G + ++ +V+NC
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 243 CKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKLGCSPNI 302
C+ R A V+G M FG V + +++GF + +R DA LV KME++G P++
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 303 VTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEALSIFLS 362
V Y T+I G LV+DA + +E +G D V YN L+ L GR+ +A +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 363 FDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVDGL---FVEVDLVACNSLLSYLGKAGF 422
++I+P+ TF+++++ +F KL + + V+ D+ NSL++ L G
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 423 PSLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHL---------------YNG 482
A ++ D M+ KG +PD + ++ G C+S+R+DE L YN
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 483 ILLNY-----------------TGVDAHIHTVIMGGLIKAGKCHSAIRVFRKILLEENSL 542
I+ Y + + +++++ GL + A+ +F + E L
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 543 DIISYSVAIRGLLKVGRDTEACNLYNDMKEAGINPNAHICNVLLSSFCKERNFESVKHML 571
DI +Y++ I G+ K+G +A +L+ + G+ P+ ++S FC++R ++ +
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 474
BLAST of Lcy06g009850 vs. ExPASy Swiss-Prot
Match:
Q9C8T7 (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX=3702 GN=At1g63330 PE=2 SV=2)
HSP 1 Score: 172.2 bits (435), Expect = 2.0e-41
Identity = 120/483 (24.84%), Postives = 228/483 (47.20%), Query Frame = 0
Query: 98 FDYMVGVVSRLMKRYETVNEILGGLESVGNVTKAQTFLLLLRIYWHGGMYELVFEAFDHM 157
F+ ++ +++ MK+++ V + ++ +G T+ +L+ + L M
Sbjct: 13 FNKLLSAIAK-MKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 72
Query: 158 GHCGFTPNTFARNVIMDVLFKVGRADVALKVFKETL----LPNFLTFNIVLCNL---SKI 217
G+ P+ + +++ R A+ + + + P+ +TF ++ L +K
Sbjct: 73 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 132
Query: 218 KDLIGIKDAFRCMLRMGYYPNPGTFEVVLNCFCKLGRLAEAYQVLGVMTTFGISMSVNIW 277
+ + + D M++ G PN T+ VV+N CK G + A+ +L M I V I+
Sbjct: 133 SEAVALVDR---MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 192
Query: 278 TIMVDGFRRLHRTADASSLVKKMEKLGCSPNIVTYTTLIKGYMDAQLVSDAFGVLSIIES 337
++D + DA +L K+ME G PN+VTY++LI SDA +LS +
Sbjct: 193 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 252
Query: 338 EGHSPDCVLYNVLIDSLAKIGRFDEALSIFLSFDKQNILPDSYTFSSLLNTLCLSKRFFL 397
+ +P+ V +N LID+ K G+F EA + K++I PD +T++SL+N C+ R
Sbjct: 253 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 312
Query: 398 LPKLVDGLFVE---VDLVACNSLLSYLGKAGFPSLALELYDEMLDKGLMPDKYSVLGVLT 457
++ + + + DL N+L+ K+ EL+ EM +GL+ D + ++
Sbjct: 313 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 372
Query: 458 GLCESRRIDEAVHLYNGILLNYTGVDAHIHTVIMGGLIKAGKCHSAIRVFRKILLEENSL 517
GL D A ++ ++ + D +++++ GL GK A+ VF + E L
Sbjct: 373 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 432
Query: 518 DIISYSVAIRGLLKVGRDTEACNLYNDMKEAGINPNAHICNVLLSSFCKERNFESVKHML 571
DI Y+ I G+ K G+ + +L+ + G+ PN N ++S C +R + +L
Sbjct: 433 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 491
BLAST of Lcy06g009850 vs. ExPASy TrEMBL
Match:
A0A6J1CES7 (putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010829 PE=4 SV=1)
HSP 1 Score: 1133.6 bits (2931), Expect = 0.0e+00
Identity = 559/665 (84.06%), Postives = 599/665 (90.08%), Query Frame = 0
Query: 1 MIWRHGCNLFQIAPRQILRTFSHQSNRKCSAPLVNLTKNLHNRLNEDIEHKFSEKRQVIL 60
M WRHG +LFQIAPRQ LRT +HQS KCS PLVNLT+ LHNRLN++ E K+SEK QVIL
Sbjct: 1 MKWRHGRSLFQIAPRQFLRTLAHQSGPKCSTPLVNLTEKLHNRLNQNAERKYSEKGQVIL 60
Query: 61 TNELAHTTLLNCPSDLVALSFFLWCAKQPNFFHNAAAFDYMVGVVSRLMKRYETVNEILG 120
TNEL HTTLLNCPSDLVALSFFLWCAKQP+FFH+A AFDYMVGVVSRLMKRYETVN ++G
Sbjct: 61 TNELVHTTLLNCPSDLVALSFFLWCAKQPDFFHSATAFDYMVGVVSRLMKRYETVNGVVG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWHGGMYELVFEAFDHMGHCGFTPNTFARNVIMDVLFKVG 180
GLESVGNVTKAQTFLLLLRIYW GGMYELVFEAFD MGHCGFTPNTFARNVI+DVLFKVG
Sbjct: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDQMGHCGFTPNTFARNVIVDVLFKVG 180
Query: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFEVVLN 240
RADVALKVFKET LPNFLTFNIVLCNLSKIKD +GI DA R MLRMGYYPNPGTFE VLN
Sbjct: 181 RADVALKVFKETPLPNFLTFNIVLCNLSKIKDFVGIGDAVRRMLRMGYYPNPGTFEGVLN 240
Query: 241 CFCKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKLGCSP 300
CFCKLGRLAEAYQVLG+MTT GISMSVNIWTI+VDGF RLHRTADASSLVKKM++ GC P
Sbjct: 241 CFCKLGRLAEAYQVLGIMTTLGISMSVNIWTIIVDGFCRLHRTADASSLVKKMKRTGCFP 300
Query: 301 NIVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEALSIF 360
NIVTYTTLIK Y++AQL SDA VLSIIESEGHSPD VLYNVLIDSLAKIGR+D+ALSIF
Sbjct: 301 NIVTYTTLIKAYLEAQLFSDASSVLSIIESEGHSPDRVLYNVLIDSLAKIGRYDKALSIF 360
Query: 361 LSFDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVDGLFVEVDLVACNSLLSYLGKAGFP 420
LS DKQNI PDSYTFSSLLN +CLSK FFLLPKLVDG FVE DLVACNSLL+YL KAGFP
Sbjct: 361 LSLDKQNIYPDSYTFSSLLNVICLSKMFFLLPKLVDGFFVEADLVACNSLLNYLSKAGFP 420
Query: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHLYNGILLNYTGVDAHIHTVI 480
SLALELYDEMLDKGLMPDKYSVLGVLTGLC SRRIDEAVHLYNGILLN+TGVDAHIHTVI
Sbjct: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCGSRRIDEAVHLYNGILLNHTGVDAHIHTVI 480
Query: 481 MGGLIKAGKCHSAIRVFRKILLEENSLDIISYSVAIRGLLKVGRDTEACNLYNDMKEAGI 540
+ GLIKAGKCHSAIRVFRK LLEENSLD++S++V IRGLL V R TEA NLYN MKE GI
Sbjct: 481 IDGLIKAGKCHSAIRVFRKTLLEENSLDVVSFTVGIRGLLMVSRHTEALNLYNHMKEVGI 540
Query: 541 NPNAHICNVLLSSFCKERNFESVKHMLQEMIDLRIELSCTNFFRLCNAICRSSYNYHLVV 600
NPN HICN++L +FCKERN ESV+ MLQEMIDLRIE+SC NF RLCNAICRSSYN LV+
Sbjct: 541 NPNGHICNLMLFNFCKERNLESVEQMLQEMIDLRIEMSCNNFVRLCNAICRSSYNSRLVI 600
Query: 601 YLLIEMKDLELLPGKQACKTLVHEPPKTMNFSEKHHKLLNGCIEYGLFDDTSGSEEHTDA 660
YLLIEM+DL LLP K ACK LVH+PPK +N EKHH+LLNGCIEYGLF TSGSEE+TD
Sbjct: 601 YLLIEMRDLGLLPAKLACKILVHKPPKVVNVFEKHHELLNGCIEYGLFGYTSGSEEYTDV 660
Query: 661 AASVG 666
+ASVG
Sbjct: 661 SASVG 665
BLAST of Lcy06g009850 vs. ExPASy TrEMBL
Match:
A0A6J1KFA9 (putative pentatricopeptide repeat-containing protein At1g16830 OS=Cucurbita maxima OX=3661 GN=LOC111495287 PE=4 SV=1)
HSP 1 Score: 1112.4 bits (2876), Expect = 0.0e+00
Identity = 556/665 (83.61%), Postives = 598/665 (89.92%), Query Frame = 0
Query: 1 MIWRHGCNLFQIAPRQILRTFSHQSNRKCSAPLVNLTKNLHNRLNEDIEHKFSEKRQVIL 60
MIWRHGCN+F+IA RQILRTF+HQ RKCSA L+NLTKNLHN+LNEDIE KFSE RQVIL
Sbjct: 1 MIWRHGCNIFRIASRQILRTFAHQPYRKCSASLINLTKNLHNQLNEDIEQKFSENRQVIL 60
Query: 61 TNELAHTTLLNCPSDLVALSFFLWCAKQPNFFHNAAAFDYMVGVVSRLMKRYETVNEILG 120
TNEL HTTLL C SDLV LSFF+WCAKQPNFFHN AF+YMVGVVSRLM+RYETV+ ILG
Sbjct: 61 TNELVHTTLLTCSSDLVTLSFFMWCAKQPNFFHNTTAFEYMVGVVSRLMERYETVSGILG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWHGGMYELVFEAFDHMGHCGFTPNTFARNVIMDVLFKVG 180
LESVG VTKAQTFLLLLRIYW GGMYELVFEAFDHM CGFTPNTFARNVIMDVLFKVG
Sbjct: 121 ALESVGIVTKAQTFLLLLRIYWRGGMYELVFEAFDHMDRCGFTPNTFARNVIMDVLFKVG 180
Query: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFEVVLN 240
RADVALKVFKETLLPNFLTFNIVLCNLSKI+DLIGI+DAFRCMLRMGY PNPGTFEVVLN
Sbjct: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIRDLIGIRDAFRCMLRMGYSPNPGTFEVVLN 240
Query: 241 CFCKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKLGCSP 300
CKLGRL EAYQVLG+MTT GISMSVNIWTIM+DG RRL+RT+DASSLVKKMEK GCSP
Sbjct: 241 DLCKLGRLVEAYQVLGIMTTIGISMSVNIWTIMIDGLRRLNRTSDASSLVKKMEKSGCSP 300
Query: 301 NIVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEALSIF 360
NIVTYTTLIKGYMDAQLVSDAF VLSII EG PD VLYNVLID LAKIGR+DEAL IF
Sbjct: 301 NIVTYTTLIKGYMDAQLVSDAFDVLSIIRLEGLPPDRVLYNVLIDGLAKIGRYDEALCIF 360
Query: 361 LSFDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVDGLFVEVDLVACNSLLSYLGKAGFP 420
LS DKQNILPD YTFSSLLNT+CLSKR FLLPKLVDG FVEVDLVACNSLLSYL KAGFP
Sbjct: 361 LSMDKQNILPDCYTFSSLLNTICLSKRVFLLPKLVDGFFVEVDLVACNSLLSYLAKAGFP 420
Query: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHLYNGILLNYTGVDAHIHTVI 480
SLALELYDEMLDKGLMPDKYSVLGVLTGLC+++RIDEAV+LYNGILLNYTGVDAHIHTVI
Sbjct: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCQAKRIDEAVNLYNGILLNYTGVDAHIHTVI 480
Query: 481 MGGLIKAGKCHSAIRVFRKILLEENSLDIISYSVAIRGLLKVGRDTEACNLYNDMKEAGI 540
+ GLIKAGKCHSAIRVFRK LLE++SLD +SYSVAIRGLL VGR TEA NLYN MKEAGI
Sbjct: 481 INGLIKAGKCHSAIRVFRKKLLEKSSLDAVSYSVAIRGLLMVGRGTEAYNLYNYMKEAGI 540
Query: 541 NPNAHICNVLLSSFCKERNFESVKHMLQEMIDLRIELSCTNFFRLCNAICRSSYNYHLVV 600
NPN +CNV+LSSFCKE++FESVK MLQEMIDL IE+S NFFRLCNAI SSYN++LV
Sbjct: 541 NPNGDMCNVMLSSFCKEKDFESVKQMLQEMIDLGIEISWNNFFRLCNAIYSSSYNFYLVS 600
Query: 601 YLLIEMKDLELLPGKQACKTLVHEPPKTMNFSEKHHKLLNGCIEYGLFDDTSGSEEHTDA 660
+LL+EMK L LLP K ACKTLV++ K +N SE+HHKLLNG +EY LF DTS S+E+T+
Sbjct: 601 HLLVEMKGLGLLPDKLACKTLVYKRLKAVNISEEHHKLLNGHLEYCLFGDTSSSDEYTNV 660
Query: 661 AASVG 666
AASVG
Sbjct: 661 AASVG 665
BLAST of Lcy06g009850 vs. ExPASy TrEMBL
Match:
A0A0A0M137 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G537540 PE=4 SV=1)
HSP 1 Score: 1083.2 bits (2800), Expect = 0.0e+00
Identity = 541/665 (81.35%), Postives = 590/665 (88.72%), Query Frame = 0
Query: 1 MIWRHGCNLFQIAPRQILRTFSHQSNRKCSAPLVNLTKNLHNRLNEDIEHKFSEKRQVIL 60
MIWR+GCN+FQIA RQI+RTF+HQS R+C+ P +NLTK LHNRL+EDIE KFSE RQVIL
Sbjct: 1 MIWRYGCNIFQIASRQIIRTFAHQSYRRCTTPHINLTKILHNRLDEDIEQKFSENRQVIL 60
Query: 61 TNELAHTTLLNCPSDLVALSFFLWCAKQPNFFHNAAAFDYMVGVVSRLMKRYETVNEILG 120
TN+L +TTLLNC SDL+ALSFF+WCAKQPNFFHN AAFDYMVGVVSRLMK+YETVN ILG
Sbjct: 61 TNDLVYTTLLNCSSDLIALSFFMWCAKQPNFFHNPAAFDYMVGVVSRLMKQYETVNGILG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWHGGMYELVFEAFDHMGHCGFTPNTFARNVIMDVLFKVG 180
GLESVGNVTKAQTFLLLLRIYW GGMY+LVFEAFDHM GFTPNTFARNVIMDVLFKVG
Sbjct: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYDLVFEAFDHMDRYGFTPNTFARNVIMDVLFKVG 180
Query: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFEVVLN 240
RADVALKVFKETLLPNFLTFNIVLCNLSK KDLIGI D FRCMLRMGY PNPGTFEVVLN
Sbjct: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKTKDLIGIGDTFRCMLRMGYCPNPGTFEVVLN 240
Query: 241 CFCKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKLGCSP 300
CKLGRLAEAYQV G+MTTFGISMSVNIWTIM+DGF RL RT +ASSLVKKM+K GCSP
Sbjct: 241 GLCKLGRLAEAYQVWGIMTTFGISMSVNIWTIMIDGFCRLRRTEEASSLVKKMKKSGCSP 300
Query: 301 NIVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEALSIF 360
NIVTYTTLIKGY+ AQ +SDAF VLSIIESEG SPD +LYNVLIDSLAK R+++ALSIF
Sbjct: 301 NIVTYTTLIKGYIYAQRISDAFDVLSIIESEGPSPDLILYNVLIDSLAKNERYNDALSIF 360
Query: 361 LSFDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVDGLFVEVDLVACNSLLSYLGKAGFP 420
LS K+NILPD YTFSSLLNT+CLSKR FLLPKLVDG VEVDLVACNSLLSYLGKAGF
Sbjct: 361 LSLHKRNILPDCYTFSSLLNTICLSKRLFLLPKLVDGFLVEVDLVACNSLLSYLGKAGFA 420
Query: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHLYNGILLNYTGVDAHIHTVI 480
+LALELY+ M++ GLMPDKYSVLGVLTGLCESRRI EAV LYNGILLNYTGVDAHIHTVI
Sbjct: 421 ALALELYNNMVNGGLMPDKYSVLGVLTGLCESRRIGEAVRLYNGILLNYTGVDAHIHTVI 480
Query: 481 MGGLIKAGKCHSAIRVFRKILLEENSLDIISYSVAIRGLLKVGRDTEACNLYNDMKEAGI 540
+ GLIKAGK HSAIR+FR+ LLEENSLD++SYSVAIRGLL VGR+TEA NLYN MKEAGI
Sbjct: 481 IDGLIKAGKFHSAIRIFRRNLLEENSLDVVSYSVAIRGLLLVGRNTEASNLYNYMKEAGI 540
Query: 541 NPNAHICNVLLSSFCKERNFESVKHMLQEMIDLRIELSCTNFFRLCNAICRSSYNYHLVV 600
NPN H+CNV+LS+FCKE+ F VK MLQEMIDL I++S NFFRL NAICRSS HLV+
Sbjct: 541 NPNGHVCNVMLSTFCKEKKFALVKQMLQEMIDLGIKMSRNNFFRLYNAICRSSNGSHLVI 600
Query: 601 YLLIEMKDLELLPGKQACKTLVHEPPKTMNFSEKHHKLLNGCIEYGLFDDTSGSEEHTDA 660
YLLIEMK L LLP K+ C+TLVH PPK +N SEKH+KLLNGC+EY L DTS SEE+TD
Sbjct: 601 YLLIEMKVLGLLPRKRDCETLVHNPPKDVNISEKHYKLLNGCLEYCLCGDTSSSEEYTDV 660
Query: 661 AASVG 666
AA VG
Sbjct: 661 AAFVG 665
BLAST of Lcy06g009850 vs. ExPASy TrEMBL
Match:
A0A6J1EGE1 (putative pentatricopeptide repeat-containing protein At1g16830 OS=Cucurbita moschata OX=3662 GN=LOC111434100 PE=4 SV=1)
HSP 1 Score: 1066.2 bits (2756), Expect = 5.4e-308
Identity = 529/618 (85.60%), Postives = 564/618 (91.26%), Query Frame = 0
Query: 1 MIWRHGCNLFQIAPRQILRTFSHQSNRKCSAPLVNLTKNLHNRLNEDIEHKFSEKRQVIL 60
MIW HGCN+F+IAPRQILRTF+HQ +RKC APL+NLTKNLHN+LN+DIE KFSE RQVIL
Sbjct: 1 MIWGHGCNIFRIAPRQILRTFAHQPHRKCLAPLINLTKNLHNQLNQDIEQKFSENRQVIL 60
Query: 61 TNELAHTTLLNCPSDLVALSFFLWCAKQPNFFHNAAAFDYMVGVVSRLMKRYETVNEILG 120
TNEL HTTLLNC SDLV LSFF+WCAKQPNFFHN AF+YMVGVVSRLM+RYETV+ ILG
Sbjct: 61 TNELVHTTLLNCSSDLVTLSFFMWCAKQPNFFHNTTAFEYMVGVVSRLMERYETVSGILG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWHGGMYELVFEAFDHMGHCGFTPNTFARNVIMDVLFKVG 180
LESVG VTKAQTFLLLLRIYW GGMYELVFEAFDHM CGFTPNTFARNVIMDVLFKVG
Sbjct: 121 ALESVGIVTKAQTFLLLLRIYWRGGMYELVFEAFDHMDRCGFTPNTFARNVIMDVLFKVG 180
Query: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFEVVLN 240
RADVAL+VFKETLLPNFLTFNIVLCNLSKI+DLIGI+DAFRCMLRMGYYPNPGTFEVVLN
Sbjct: 181 RADVALEVFKETLLPNFLTFNIVLCNLSKIRDLIGIRDAFRCMLRMGYYPNPGTFEVVLN 240
Query: 241 CFCKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKLGCSP 300
CKLGRL EAYQVLG+MTT GISMSVNIWTIM+DGFRRLHRTADASSLVKKME GCSP
Sbjct: 241 DLCKLGRLVEAYQVLGIMTTIGISMSVNIWTIMIDGFRRLHRTADASSLVKKMEISGCSP 300
Query: 301 NIVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEALSIF 360
NIVTYTTLIKGYMDAQLVSDAF VLSIIE EG SPD VLYNVLID LAKIGR+DEAL IF
Sbjct: 301 NIVTYTTLIKGYMDAQLVSDAFDVLSIIELEGLSPDRVLYNVLIDGLAKIGRYDEALCIF 360
Query: 361 LSFDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVDGLFVEVDLVACNSLLSYLGKAGFP 420
LS DKQNILPD YTFSSLLNT+CLSKR FLLPKLVDG FVEVDLVACNSLLSYLGKAGFP
Sbjct: 361 LSMDKQNILPDCYTFSSLLNTICLSKRVFLLPKLVDGFFVEVDLVACNSLLSYLGKAGFP 420
Query: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHLYNGILLNYTGVDAHIHTVI 480
SLALELYDEMLDKGLMPDKYSVLGVLTGLC+++RIDEAV+LYNGILLNYTGVDAHIHTVI
Sbjct: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCQAKRIDEAVNLYNGILLNYTGVDAHIHTVI 480
Query: 481 MGGLIKAGKCHSAIRVFRKILLEENSLDIISYSVAIRGLLKVGRDTEACNLYNDMKEAGI 540
+ GLIKAGKCHSAIRVFRK LLE++SLD +SYSVAIRGLL VGR TEAC LYN MKEAGI
Sbjct: 481 INGLIKAGKCHSAIRVFRKKLLEKSSLDAVSYSVAIRGLLMVGRGTEACKLYNYMKEAGI 540
Query: 541 NPNAHICNVLLSSFCKERNFESVKHMLQEMIDLRIELSCTNFFRLCNAICRSSYNYHLVV 600
NPN +CNV+LSSFCKE++FESVK MLQEMIDL IE+S NFFRLCNAI SSYN++ V
Sbjct: 541 NPNGDMCNVMLSSFCKEKDFESVKQMLQEMIDLGIEISWNNFFRLCNAIYSSSYNFYPVS 600
Query: 601 YLLIEMKDLELLPGKQAC 619
+LL+EMK L LLP K C
Sbjct: 601 HLLVEMKGLGLLPDKLGC 618
BLAST of Lcy06g009850 vs. ExPASy TrEMBL
Match:
A0A6J1CES3 (putative pentatricopeptide repeat-containing protein At1g16830 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010829 PE=4 SV=1)
HSP 1 Score: 968.8 bits (2503), Expect = 1.2e-278
Identity = 480/565 (84.96%), Postives = 512/565 (90.62%), Query Frame = 0
Query: 101 MVGVVSRLMKRYETVNEILGGLESVGNVTKAQTFLLLLRIYWHGGMYELVFEAFDHMGHC 160
MVGVVSRLMKRYETVN ++GGLESVGNVTKAQTFLLLLRIYW GGMYELVFEAFD MGHC
Sbjct: 1 MVGVVSRLMKRYETVNGVVGGLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDQMGHC 60
Query: 161 GFTPNTFARNVIMDVLFKVGRADVALKVFKETLLPNFLTFNIVLCNLSKIKDLIGIKDAF 220
GFTPNTFARNVI+DVLFKVGRADVALKVFKET LPNFLTFNIVLCNLSKIKD +GI DA
Sbjct: 61 GFTPNTFARNVIVDVLFKVGRADVALKVFKETPLPNFLTFNIVLCNLSKIKDFVGIGDAV 120
Query: 221 RCMLRMGYYPNPGTFEVVLNCFCKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRL 280
R MLRMGYYPNPGTFE VLNCFCKLGRLAEAYQVLG+MTT GISMSVNIWTI+VDGF RL
Sbjct: 121 RRMLRMGYYPNPGTFEGVLNCFCKLGRLAEAYQVLGIMTTLGISMSVNIWTIIVDGFCRL 180
Query: 281 HRTADASSLVKKMEKLGCSPNIVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLY 340
HRTADASSLVKKM++ GC PNIVTYTTLIK Y++AQL SDA VLSIIESEGHSPD VLY
Sbjct: 181 HRTADASSLVKKMKRTGCFPNIVTYTTLIKAYLEAQLFSDASSVLSIIESEGHSPDRVLY 240
Query: 341 NVLIDSLAKIGRFDEALSIFLSFDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVDGLFV 400
NVLIDSLAKIGR+D+ALSIFLS DKQNI PDSYTFSSLLN +CLSK FFLLPKLVDG FV
Sbjct: 241 NVLIDSLAKIGRYDKALSIFLSLDKQNIYPDSYTFSSLLNVICLSKMFFLLPKLVDGFFV 300
Query: 401 EVDLVACNSLLSYLGKAGFPSLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVH 460
E DLVACNSLL+YL KAGFPSLALELYDEMLDKGLMPDKYSVLGVLTGLC SRRIDEAVH
Sbjct: 301 EADLVACNSLLNYLSKAGFPSLALELYDEMLDKGLMPDKYSVLGVLTGLCGSRRIDEAVH 360
Query: 461 LYNGILLNYTGVDAHIHTVIMGGLIKAGKCHSAIRVFRKILLEENSLDIISYSVAIRGLL 520
LYNGILLN+TGVDAHIHTVI+ GLIKAGKCHSAIRVFRK LLEENSLD++S++V IRGLL
Sbjct: 361 LYNGILLNHTGVDAHIHTVIIDGLIKAGKCHSAIRVFRKTLLEENSLDVVSFTVGIRGLL 420
Query: 521 KVGRDTEACNLYNDMKEAGINPNAHICNVLLSSFCKERNFESVKHMLQEMIDLRIELSCT 580
V R TEA NLYN MKE GINPN HICN++L +FCKERN ESV+ MLQEMIDLRIE+SC
Sbjct: 421 MVSRHTEALNLYNHMKEVGINPNGHICNLMLFNFCKERNLESVEQMLQEMIDLRIEMSCN 480
Query: 581 NFFRLCNAICRSSYNYHLVVYLLIEMKDLELLPGKQACKTLVHEPPKTMNFSEKHHKLLN 640
NF RLCNAICRSSYN LV+YLLIEM+DL LLP K ACK LVH+PPK +N EKHH+LLN
Sbjct: 481 NFVRLCNAICRSSYNSRLVIYLLIEMRDLGLLPAKLACKILVHKPPKVVNVFEKHHELLN 540
Query: 641 GCIEYGLFDDTSGSEEHTDAAASVG 666
GCIEYGLF TSGSEE+TD +ASVG
Sbjct: 541 GCIEYGLFGYTSGSEEYTDVSASVG 565
BLAST of Lcy06g009850 vs. NCBI nr
Match:
XP_022140090.1 (putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Momordica charantia] >XP_022140091.1 putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Momordica charantia] >XP_022140093.1 putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Momordica charantia])
HSP 1 Score: 1133.6 bits (2931), Expect = 0.0e+00
Identity = 559/665 (84.06%), Postives = 599/665 (90.08%), Query Frame = 0
Query: 1 MIWRHGCNLFQIAPRQILRTFSHQSNRKCSAPLVNLTKNLHNRLNEDIEHKFSEKRQVIL 60
M WRHG +LFQIAPRQ LRT +HQS KCS PLVNLT+ LHNRLN++ E K+SEK QVIL
Sbjct: 1 MKWRHGRSLFQIAPRQFLRTLAHQSGPKCSTPLVNLTEKLHNRLNQNAERKYSEKGQVIL 60
Query: 61 TNELAHTTLLNCPSDLVALSFFLWCAKQPNFFHNAAAFDYMVGVVSRLMKRYETVNEILG 120
TNEL HTTLLNCPSDLVALSFFLWCAKQP+FFH+A AFDYMVGVVSRLMKRYETVN ++G
Sbjct: 61 TNELVHTTLLNCPSDLVALSFFLWCAKQPDFFHSATAFDYMVGVVSRLMKRYETVNGVVG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWHGGMYELVFEAFDHMGHCGFTPNTFARNVIMDVLFKVG 180
GLESVGNVTKAQTFLLLLRIYW GGMYELVFEAFD MGHCGFTPNTFARNVI+DVLFKVG
Sbjct: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYELVFEAFDQMGHCGFTPNTFARNVIVDVLFKVG 180
Query: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFEVVLN 240
RADVALKVFKET LPNFLTFNIVLCNLSKIKD +GI DA R MLRMGYYPNPGTFE VLN
Sbjct: 181 RADVALKVFKETPLPNFLTFNIVLCNLSKIKDFVGIGDAVRRMLRMGYYPNPGTFEGVLN 240
Query: 241 CFCKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKLGCSP 300
CFCKLGRLAEAYQVLG+MTT GISMSVNIWTI+VDGF RLHRTADASSLVKKM++ GC P
Sbjct: 241 CFCKLGRLAEAYQVLGIMTTLGISMSVNIWTIIVDGFCRLHRTADASSLVKKMKRTGCFP 300
Query: 301 NIVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEALSIF 360
NIVTYTTLIK Y++AQL SDA VLSIIESEGHSPD VLYNVLIDSLAKIGR+D+ALSIF
Sbjct: 301 NIVTYTTLIKAYLEAQLFSDASSVLSIIESEGHSPDRVLYNVLIDSLAKIGRYDKALSIF 360
Query: 361 LSFDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVDGLFVEVDLVACNSLLSYLGKAGFP 420
LS DKQNI PDSYTFSSLLN +CLSK FFLLPKLVDG FVE DLVACNSLL+YL KAGFP
Sbjct: 361 LSLDKQNIYPDSYTFSSLLNVICLSKMFFLLPKLVDGFFVEADLVACNSLLNYLSKAGFP 420
Query: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHLYNGILLNYTGVDAHIHTVI 480
SLALELYDEMLDKGLMPDKYSVLGVLTGLC SRRIDEAVHLYNGILLN+TGVDAHIHTVI
Sbjct: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCGSRRIDEAVHLYNGILLNHTGVDAHIHTVI 480
Query: 481 MGGLIKAGKCHSAIRVFRKILLEENSLDIISYSVAIRGLLKVGRDTEACNLYNDMKEAGI 540
+ GLIKAGKCHSAIRVFRK LLEENSLD++S++V IRGLL V R TEA NLYN MKE GI
Sbjct: 481 IDGLIKAGKCHSAIRVFRKTLLEENSLDVVSFTVGIRGLLMVSRHTEALNLYNHMKEVGI 540
Query: 541 NPNAHICNVLLSSFCKERNFESVKHMLQEMIDLRIELSCTNFFRLCNAICRSSYNYHLVV 600
NPN HICN++L +FCKERN ESV+ MLQEMIDLRIE+SC NF RLCNAICRSSYN LV+
Sbjct: 541 NPNGHICNLMLFNFCKERNLESVEQMLQEMIDLRIEMSCNNFVRLCNAICRSSYNSRLVI 600
Query: 601 YLLIEMKDLELLPGKQACKTLVHEPPKTMNFSEKHHKLLNGCIEYGLFDDTSGSEEHTDA 660
YLLIEM+DL LLP K ACK LVH+PPK +N EKHH+LLNGCIEYGLF TSGSEE+TD
Sbjct: 601 YLLIEMRDLGLLPAKLACKILVHKPPKVVNVFEKHHELLNGCIEYGLFGYTSGSEEYTDV 660
Query: 661 AASVG 666
+ASVG
Sbjct: 661 SASVG 665
BLAST of Lcy06g009850 vs. NCBI nr
Match:
XP_023001025.1 (putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima] >XP_023001026.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima] >XP_023001027.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima] >XP_023001028.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima] >XP_023001029.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima])
HSP 1 Score: 1112.4 bits (2876), Expect = 0.0e+00
Identity = 556/665 (83.61%), Postives = 598/665 (89.92%), Query Frame = 0
Query: 1 MIWRHGCNLFQIAPRQILRTFSHQSNRKCSAPLVNLTKNLHNRLNEDIEHKFSEKRQVIL 60
MIWRHGCN+F+IA RQILRTF+HQ RKCSA L+NLTKNLHN+LNEDIE KFSE RQVIL
Sbjct: 1 MIWRHGCNIFRIASRQILRTFAHQPYRKCSASLINLTKNLHNQLNEDIEQKFSENRQVIL 60
Query: 61 TNELAHTTLLNCPSDLVALSFFLWCAKQPNFFHNAAAFDYMVGVVSRLMKRYETVNEILG 120
TNEL HTTLL C SDLV LSFF+WCAKQPNFFHN AF+YMVGVVSRLM+RYETV+ ILG
Sbjct: 61 TNELVHTTLLTCSSDLVTLSFFMWCAKQPNFFHNTTAFEYMVGVVSRLMERYETVSGILG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWHGGMYELVFEAFDHMGHCGFTPNTFARNVIMDVLFKVG 180
LESVG VTKAQTFLLLLRIYW GGMYELVFEAFDHM CGFTPNTFARNVIMDVLFKVG
Sbjct: 121 ALESVGIVTKAQTFLLLLRIYWRGGMYELVFEAFDHMDRCGFTPNTFARNVIMDVLFKVG 180
Query: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFEVVLN 240
RADVALKVFKETLLPNFLTFNIVLCNLSKI+DLIGI+DAFRCMLRMGY PNPGTFEVVLN
Sbjct: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIRDLIGIRDAFRCMLRMGYSPNPGTFEVVLN 240
Query: 241 CFCKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKLGCSP 300
CKLGRL EAYQVLG+MTT GISMSVNIWTIM+DG RRL+RT+DASSLVKKMEK GCSP
Sbjct: 241 DLCKLGRLVEAYQVLGIMTTIGISMSVNIWTIMIDGLRRLNRTSDASSLVKKMEKSGCSP 300
Query: 301 NIVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEALSIF 360
NIVTYTTLIKGYMDAQLVSDAF VLSII EG PD VLYNVLID LAKIGR+DEAL IF
Sbjct: 301 NIVTYTTLIKGYMDAQLVSDAFDVLSIIRLEGLPPDRVLYNVLIDGLAKIGRYDEALCIF 360
Query: 361 LSFDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVDGLFVEVDLVACNSLLSYLGKAGFP 420
LS DKQNILPD YTFSSLLNT+CLSKR FLLPKLVDG FVEVDLVACNSLLSYL KAGFP
Sbjct: 361 LSMDKQNILPDCYTFSSLLNTICLSKRVFLLPKLVDGFFVEVDLVACNSLLSYLAKAGFP 420
Query: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHLYNGILLNYTGVDAHIHTVI 480
SLALELYDEMLDKGLMPDKYSVLGVLTGLC+++RIDEAV+LYNGILLNYTGVDAHIHTVI
Sbjct: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCQAKRIDEAVNLYNGILLNYTGVDAHIHTVI 480
Query: 481 MGGLIKAGKCHSAIRVFRKILLEENSLDIISYSVAIRGLLKVGRDTEACNLYNDMKEAGI 540
+ GLIKAGKCHSAIRVFRK LLE++SLD +SYSVAIRGLL VGR TEA NLYN MKEAGI
Sbjct: 481 INGLIKAGKCHSAIRVFRKKLLEKSSLDAVSYSVAIRGLLMVGRGTEAYNLYNYMKEAGI 540
Query: 541 NPNAHICNVLLSSFCKERNFESVKHMLQEMIDLRIELSCTNFFRLCNAICRSSYNYHLVV 600
NPN +CNV+LSSFCKE++FESVK MLQEMIDL IE+S NFFRLCNAI SSYN++LV
Sbjct: 541 NPNGDMCNVMLSSFCKEKDFESVKQMLQEMIDLGIEISWNNFFRLCNAIYSSSYNFYLVS 600
Query: 601 YLLIEMKDLELLPGKQACKTLVHEPPKTMNFSEKHHKLLNGCIEYGLFDDTSGSEEHTDA 660
+LL+EMK L LLP K ACKTLV++ K +N SE+HHKLLNG +EY LF DTS S+E+T+
Sbjct: 601 HLLVEMKGLGLLPDKLACKTLVYKRLKAVNISEEHHKLLNGHLEYCLFGDTSSSDEYTNV 660
Query: 661 AASVG 666
AASVG
Sbjct: 661 AASVG 665
BLAST of Lcy06g009850 vs. NCBI nr
Match:
XP_023519013.1 (putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita pepo subsp. pepo] >XP_023519014.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita pepo subsp. pepo] >XP_023519015.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1105.9 bits (2859), Expect = 0.0e+00
Identity = 551/654 (84.25%), Postives = 590/654 (90.21%), Query Frame = 0
Query: 1 MIWRHGCNLFQIAPRQILRTFSHQSNRKCSAPLVNLTKNLHNRLNEDIEHKFSEKRQVIL 60
MIWRHGCN+F+IAP +ILRTF+HQ +RKCSAPL+NLTKNLHN+LNED+E KFSE RQVIL
Sbjct: 1 MIWRHGCNIFRIAPCKILRTFAHQPHRKCSAPLINLTKNLHNQLNEDMEQKFSENRQVIL 60
Query: 61 TNELAHTTLLNCPSDLVALSFFLWCAKQPNFFHNAAAFDYMVGVVSRLMKRYETVNEILG 120
TNEL HTTLLNC SDLV LSFF+WCAKQPNFFHN AF+YMVGVVSRLMKRYETV+ IL
Sbjct: 61 TNELVHTTLLNCSSDLVTLSFFMWCAKQPNFFHNTTAFEYMVGVVSRLMKRYETVSGILS 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWHGGMYELVFEAFDHMGHCGFTPNTFARNVIMDVLFKVG 180
GLESVG VTKAQTFLLLLRIYW GGMYELVFEAFDHM GFTPNTFARNVIMDVLFKVG
Sbjct: 121 GLESVGIVTKAQTFLLLLRIYWRGGMYELVFEAFDHMDRRGFTPNTFARNVIMDVLFKVG 180
Query: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFEVVLN 240
RADVALKVFKETLLPNFLTFNIVLCNLSKI+DLIGI+DAFRCMLRMGYYPNPGTFEVVLN
Sbjct: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIRDLIGIRDAFRCMLRMGYYPNPGTFEVVLN 240
Query: 241 CFCKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKLGCSP 300
CKLGRL EAYQVLG+MTT GISMSVNIWTIM+DGFRRLHRTADASSLVKKMEK GCSP
Sbjct: 241 DLCKLGRLVEAYQVLGIMTTIGISMSVNIWTIMIDGFRRLHRTADASSLVKKMEKSGCSP 300
Query: 301 NIVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEALSIF 360
NIVTYTTLIKGYMDAQLVSDAF VLSIIE EG SPD VLYNVLID LAKIGR+DEAL IF
Sbjct: 301 NIVTYTTLIKGYMDAQLVSDAFDVLSIIELEGLSPDRVLYNVLIDGLAKIGRYDEALCIF 360
Query: 361 LSFDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVDGLFVEVDLVACNSLLSYLGKAGFP 420
LS DKQNILPD YTFSSLLNT+CLSKR FLLPKLVDG F +VDLVACNSLLSYL KAGFP
Sbjct: 361 LSMDKQNILPDCYTFSSLLNTICLSKRVFLLPKLVDGFFADVDLVACNSLLSYLAKAGFP 420
Query: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHLYNGILLNYTGVDAHIHTVI 480
SLALELYDEMLDKGLMPDKYSVLGVLTGLC+++RIDEAV+LYNGILLNYTGVDAHIHTVI
Sbjct: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCQAKRIDEAVNLYNGILLNYTGVDAHIHTVI 480
Query: 481 MGGLIKAGKCHSAIRVFRKILLEENSLDIISYSVAIRGLLKVGRDTEACNLYNDMKEAGI 540
+ GLIKAGKCHSAIRVFRK LL +SLD +SYSVAIRGLL VGR TEACNLYN MKEAGI
Sbjct: 481 INGLIKAGKCHSAIRVFRKNLLGRSSLDAVSYSVAIRGLLMVGRGTEACNLYNYMKEAGI 540
Query: 541 NPNAHICNVLLSSFCKERNFESVKHMLQEMIDLRIELSCTNFFRLCNAICRSSYNYHLVV 600
NPN +CNV+LSSFCKE++ ESVK MLQEMIDL IE+S NF RLCNAI SSYN++LV
Sbjct: 541 NPNGDMCNVMLSSFCKEKDLESVKQMLQEMIDLGIEISWNNFCRLCNAIYSSSYNFYLVS 600
Query: 601 YLLIEMKDLELLPGKQACKTLVHEPPKTMNFSEKHHKLLNGCIEYGLFDDTSGS 655
+LL+EMK L LLP K ACKTLV++ K +N SE+HHKLLNG +EY LF DTS S
Sbjct: 601 HLLVEMKGLGLLPDKLACKTLVYKRLKAVNISEEHHKLLNGHLEYCLFGDTSSS 654
BLAST of Lcy06g009850 vs. NCBI nr
Match:
XP_038894703.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g16830 [Benincasa hispida])
HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 549/665 (82.56%), Postives = 593/665 (89.17%), Query Frame = 0
Query: 1 MIWRHGCNLFQIAPRQILRTFSHQSNRKCSAPLVNLTKNLHNRLNEDIEHKFSEKRQVIL 60
MIWRHGCN+FQIAPRQILRTF+HQS+RK SAP +NLTKNLHNRL+EDIE KFSE RQVIL
Sbjct: 1 MIWRHGCNIFQIAPRQILRTFAHQSHRKWSAPFLNLTKNLHNRLDEDIEQKFSENRQVIL 60
Query: 61 TNELAHTTLLNCPSDLVALSFFLWCAKQPNFFHNAAAFDYMVGVVSRLMKRYETVNEILG 120
TN+ TTLLNC SDLVALSFF+WCAKQPNFFHN AAFDYMVGVVSRLMKRYETVN I+G
Sbjct: 61 TNDRVLTTLLNCSSDLVALSFFMWCAKQPNFFHNTAAFDYMVGVVSRLMKRYETVNGIIG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWHGGMYELVFEAFDHMGHCGFTPNTFARNVIMDVLFKVG 180
GLESVGNVTKAQTFLLLLRIYW GGMY LVFEAFDHM HCG+TPNTFA NVI+D+LFKVG
Sbjct: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYNLVFEAFDHMDHCGYTPNTFAHNVIIDMLFKVG 180
Query: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFEVVLN 240
RADVALKVFKETL+PNFLTFNIVLCNLSKIKDLIGI+D FRCM RMGY PNPGTFEVVLN
Sbjct: 181 RADVALKVFKETLMPNFLTFNIVLCNLSKIKDLIGIRDVFRCMWRMGYCPNPGTFEVVLN 240
Query: 241 CFCKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKLGCSP 300
CKLGRLAEA+QVLGVM TFG+SMSVNIWTIM+DG RLHRT DAS LVKKME+ GCSP
Sbjct: 241 GLCKLGRLAEAHQVLGVMITFGLSMSVNIWTIMIDGLCRLHRT-DASFLVKKMERSGCSP 300
Query: 301 NIVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEALSIF 360
NIVT+TTLIKGY+ A+ VSDAF VLSIIESEG SPD +LYNVLIDSLAK RF++ALSIF
Sbjct: 301 NIVTHTTLIKGYIYAKRVSDAFDVLSIIESEGPSPDQILYNVLIDSLAKNERFNDALSIF 360
Query: 361 LSFDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVDGLFVEVDLVACNSLLSYLGKAGFP 420
L+ DK+NILPD YTFSSLLNT+CLSKRFFLLPKLVD FVEVDLVACNSLLSYLGKAGFP
Sbjct: 361 LNMDKRNILPDCYTFSSLLNTICLSKRFFLLPKLVDEFFVEVDLVACNSLLSYLGKAGFP 420
Query: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHLYNGILLNYTGVDAHIHTVI 480
LALE+YDEM+DKGL PDKYSVLGVL GLCESRRI EAV LYN ILLNYTGVDAHIHTV
Sbjct: 421 LLALEVYDEMVDKGLTPDKYSVLGVLIGLCESRRIGEAVRLYNDILLNYTGVDAHIHTVT 480
Query: 481 MGGLIKAGKCHSAIRVFRKILLEENSLDIISYSVAIRGLLKVGRDTEACNLYNDMKEAGI 540
+ GLIKAGK HSAIRVFR LLEENSLD++SYSVAI GLL VGRDTEACN+YN MKE GI
Sbjct: 481 IDGLIKAGKYHSAIRVFRTNLLEENSLDVVSYSVAICGLLMVGRDTEACNMYNYMKEVGI 540
Query: 541 NPNAHICNVLLSSFCKERNFESVKHMLQEMIDLRIELSCTNFFRLCNAICRSSYNYHLVV 600
NPN HICN++LSSFCKE+NFES+K MLQEMIDL IE+S NFFRL NAICRSS + HLV+
Sbjct: 541 NPNRHICNIMLSSFCKEKNFESMKQMLQEMIDLGIEMSRNNFFRLYNAICRSSNDPHLVI 600
Query: 601 YLLIEMKDLELLPGKQACKTLVHEPPKTMNFSEKHHKLLNGCIEYGLFDDTSGSEEHTDA 660
LLIEMK L LLPGK ACKTLV PK +N +EKH+KLLNGC+EY LF DTS SEE+TD
Sbjct: 601 CLLIEMKVLGLLPGKXACKTLVDNSPKAVNITEKHYKLLNGCLEYCLFCDTSSSEEYTDV 660
Query: 661 AASVG 666
AASVG
Sbjct: 661 AASVG 664
BLAST of Lcy06g009850 vs. NCBI nr
Match:
XP_011659004.1 (putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Cucumis sativus] >KGN65906.1 hypothetical protein Csa_023183 [Cucumis sativus])
HSP 1 Score: 1083.2 bits (2800), Expect = 0.0e+00
Identity = 541/665 (81.35%), Postives = 590/665 (88.72%), Query Frame = 0
Query: 1 MIWRHGCNLFQIAPRQILRTFSHQSNRKCSAPLVNLTKNLHNRLNEDIEHKFSEKRQVIL 60
MIWR+GCN+FQIA RQI+RTF+HQS R+C+ P +NLTK LHNRL+EDIE KFSE RQVIL
Sbjct: 1 MIWRYGCNIFQIASRQIIRTFAHQSYRRCTTPHINLTKILHNRLDEDIEQKFSENRQVIL 60
Query: 61 TNELAHTTLLNCPSDLVALSFFLWCAKQPNFFHNAAAFDYMVGVVSRLMKRYETVNEILG 120
TN+L +TTLLNC SDL+ALSFF+WCAKQPNFFHN AAFDYMVGVVSRLMK+YETVN ILG
Sbjct: 61 TNDLVYTTLLNCSSDLIALSFFMWCAKQPNFFHNPAAFDYMVGVVSRLMKQYETVNGILG 120
Query: 121 GLESVGNVTKAQTFLLLLRIYWHGGMYELVFEAFDHMGHCGFTPNTFARNVIMDVLFKVG 180
GLESVGNVTKAQTFLLLLRIYW GGMY+LVFEAFDHM GFTPNTFARNVIMDVLFKVG
Sbjct: 121 GLESVGNVTKAQTFLLLLRIYWRGGMYDLVFEAFDHMDRYGFTPNTFARNVIMDVLFKVG 180
Query: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFEVVLN 240
RADVALKVFKETLLPNFLTFNIVLCNLSK KDLIGI D FRCMLRMGY PNPGTFEVVLN
Sbjct: 181 RADVALKVFKETLLPNFLTFNIVLCNLSKTKDLIGIGDTFRCMLRMGYCPNPGTFEVVLN 240
Query: 241 CFCKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKLGCSP 300
CKLGRLAEAYQV G+MTTFGISMSVNIWTIM+DGF RL RT +ASSLVKKM+K GCSP
Sbjct: 241 GLCKLGRLAEAYQVWGIMTTFGISMSVNIWTIMIDGFCRLRRTEEASSLVKKMKKSGCSP 300
Query: 301 NIVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEALSIF 360
NIVTYTTLIKGY+ AQ +SDAF VLSIIESEG SPD +LYNVLIDSLAK R+++ALSIF
Sbjct: 301 NIVTYTTLIKGYIYAQRISDAFDVLSIIESEGPSPDLILYNVLIDSLAKNERYNDALSIF 360
Query: 361 LSFDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVDGLFVEVDLVACNSLLSYLGKAGFP 420
LS K+NILPD YTFSSLLNT+CLSKR FLLPKLVDG VEVDLVACNSLLSYLGKAGF
Sbjct: 361 LSLHKRNILPDCYTFSSLLNTICLSKRLFLLPKLVDGFLVEVDLVACNSLLSYLGKAGFA 420
Query: 421 SLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHLYNGILLNYTGVDAHIHTVI 480
+LALELY+ M++ GLMPDKYSVLGVLTGLCESRRI EAV LYNGILLNYTGVDAHIHTVI
Sbjct: 421 ALALELYNNMVNGGLMPDKYSVLGVLTGLCESRRIGEAVRLYNGILLNYTGVDAHIHTVI 480
Query: 481 MGGLIKAGKCHSAIRVFRKILLEENSLDIISYSVAIRGLLKVGRDTEACNLYNDMKEAGI 540
+ GLIKAGK HSAIR+FR+ LLEENSLD++SYSVAIRGLL VGR+TEA NLYN MKEAGI
Sbjct: 481 IDGLIKAGKFHSAIRIFRRNLLEENSLDVVSYSVAIRGLLLVGRNTEASNLYNYMKEAGI 540
Query: 541 NPNAHICNVLLSSFCKERNFESVKHMLQEMIDLRIELSCTNFFRLCNAICRSSYNYHLVV 600
NPN H+CNV+LS+FCKE+ F VK MLQEMIDL I++S NFFRL NAICRSS HLV+
Sbjct: 541 NPNGHVCNVMLSTFCKEKKFALVKQMLQEMIDLGIKMSRNNFFRLYNAICRSSNGSHLVI 600
Query: 601 YLLIEMKDLELLPGKQACKTLVHEPPKTMNFSEKHHKLLNGCIEYGLFDDTSGSEEHTDA 660
YLLIEMK L LLP K+ C+TLVH PPK +N SEKH+KLLNGC+EY L DTS SEE+TD
Sbjct: 601 YLLIEMKVLGLLPRKRDCETLVHNPPKDVNISEKHYKLLNGCLEYCLCGDTSSSEEYTDV 660
Query: 661 AASVG 666
AA VG
Sbjct: 661 AAFVG 665
BLAST of Lcy06g009850 vs. TAIR 10
Match:
AT1G16830.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 424.1 bits (1089), Expect = 2.1e-118
Identity = 216/535 (40.37%), Postives = 335/535 (62.62%), Query Frame = 0
Query: 60 LTNELAHTTLLNCPSDLVALSFFLWCAKQPNFFHNAAAFDYMVGVVSRLMKRYETVNEIL 119
LT++ ++ L P+DL L+FF WCAKQ N+FH+ AFD+MVGVV +L + Y +++ I+
Sbjct: 37 LTHDNVYSCLRESPADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRII 96
Query: 120 GGLESVGNVTKAQTFLLLLRIYWHGGMYELVFEAFDHMGHCGFTPNTFARNVIMDVLFKV 179
L+ G K + FLLLL I+W G +Y+ E + M GF PNT A N++MDV FK+
Sbjct: 97 ERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKL 156
Query: 180 GRADVALKVFKETLLPNFLTFNIVL---CNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFE 239
+ AL++F+ NF +F+I L C+ DL+G+K + M+ G+YPN F
Sbjct: 157 NVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFG 216
Query: 240 VVLNCFCKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKL 299
+L C+ G ++EA+QV+G+M GIS+SVN+W+++V GF R A L KM ++
Sbjct: 217 QILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQI 276
Query: 300 GCSPNIVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEA 359
GCSPN+VTYT+LIKG++D +V +AF VLS ++SEG +PD VL N++I + ++GRF+EA
Sbjct: 277 GCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEA 336
Query: 360 LSIFLSFDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVDGLFVEVDLVACNSLLSYLGK 419
+F S +K+ ++PD YTF+S+L++LCLS +F L+P++ G+ + DLV N L + K
Sbjct: 337 RKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSK 396
Query: 420 AGFPSLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHLYNGILLNYTGVDAHI 479
G+ S AL++ M K D Y+ L+ LC A+ +Y I+ +DAH
Sbjct: 397 IGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHF 456
Query: 480 HTVIMGGLIKAGKCHSAIRVFRKILLEENSLDIISYSVAIRGLLKVGRDTEACNLYNDMK 539
H+ I+ LI+ GK ++A+ +F++ +LE+ LD++SY+VAI+GL++ R EA +L DMK
Sbjct: 457 HSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMK 516
Query: 540 EAGINPNAHICNVLLSSFCKERNFESVKHMLQEMIDLRIELSCTNFFRLCNAICR 592
E GI PN ++S CKE+ E V+ +L+E I +EL F++ + + R
Sbjct: 517 EGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSR 571
BLAST of Lcy06g009850 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 180.3 bits (456), Expect = 5.3e-45
Identity = 138/557 (24.78%), Postives = 257/557 (46.14%), Query Frame = 0
Query: 68 TLLNCPSDLVALSFFLWCAKQPNFFHNAAAFDYMVGVVSRLMKRYETVNEILGGLESVGN 127
+L + P D AL F +K+PNF A ++ ++ + R ++ + +IL ++S
Sbjct: 56 SLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGR-SGSFDDMKKILEDMKSSRC 115
Query: 128 VTKAQTFLLLLRIYWHGGMYELVFEAFDHM-GHCGFTPNTFARNVIMDVLFKVGRADVA- 187
TFL+L+ Y + + + D M G P+T N ++++L +
Sbjct: 116 EMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVE 175
Query: 188 ---LKVFKETLLPNFLTFNIVLCNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFEVVLNCF 247
K+ + P+ TFN+++ L + L M G P+ TF V+ +
Sbjct: 176 ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 235
Query: 248 CKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKL-GCSPN 307
+ G L A ++ M FG S S ++V GF + R DA + +++M G P+
Sbjct: 236 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 295
Query: 308 IVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEALSIFL 367
T+ TL+ G A V A ++ ++ EG+ PD YN +I L K+G EA+ +
Sbjct: 296 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 355
Query: 368 SFDKQNILPDSYTFSSLLNTLCLSKRF---FLLPKLVDGLFVEVDLVACNSLLSYLGKAG 427
++ P++ T+++L++TLC + L +++ + D+ NSL+ L
Sbjct: 356 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 415
Query: 428 FPSLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHLYNGILLNYTGVDAHIHT 487
+A+EL++EM KG PD+++ ++ LC ++DEA+++ + L+ +
Sbjct: 416 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 475
Query: 488 VIMGGLIKAGKCHSAIRVFRKILLEENSLDIISYSVAIRGLLKVGRDTEACNLYNDMKEA 547
++ G KA K A +F ++ + S + ++Y+ I GL K R +A L + M
Sbjct: 476 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 535
Query: 548 GINPNAHICNVLLSSFCKERNFESVKHMLQEMIDLRIELSCTNFFRLCNAICRSSYNYHL 607
G P+ + N LL+ FC+ + + ++Q M E + L + +C++ +
Sbjct: 536 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG-RVEV 595
Query: 608 VVYLL--IEMKDLELLP 614
LL I+MK + L P
Sbjct: 596 ASKLLRSIQMKGINLTP 610
BLAST of Lcy06g009850 vs. TAIR 10
Match:
AT1G62680.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 174.1 bits (440), Expect = 3.8e-43
Identity = 108/417 (25.90%), Postives = 210/417 (50.36%), Query Frame = 0
Query: 164 PNTFARNVIMDVLFKVGRADVALKVFKET----LLPNFLTFNIVL---CNLSKIKDLIGI 223
P+ N ++ + K+ + DV + + K+ + + TFNIV+ C ++ + I
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 224 KDAFRCMLRMGYYPNPGTFEVVLNCFCKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDG 283
ML++GY P+ T ++N FC+ R+++A ++ M G + + ++D
Sbjct: 143 LGK---MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 202
Query: 284 FRRLHRTADASSLVKKMEKLGCSPNIVTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPD 343
+ R DA K++E+ G PN+VTYT L+ G ++ SDA +LS + + +P+
Sbjct: 203 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 262
Query: 344 CVLYNVLIDSLAKIGRFDEALSIFLSFDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVD 403
+ Y+ L+D+ K G+ EA +F + +I PD T+SSL+N LCL R ++ D
Sbjct: 263 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 322
Query: 404 GLFVE---VDLVACNSLLSYLGKAGFPSLALELYDEMLDKGLMPDKYSVLGVLTGLCESR 463
+ + D+V+ N+L++ KA ++L+ EM +GL+ + + ++ G ++
Sbjct: 323 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 382
Query: 464 RIDEAVHLYNGILLNYTGVDAHIHTVIMGGLIKAGKCHSAIRVFRKILLEENSLDIISYS 523
+D+A ++ + D + +++GGL G+ A+ +F + E LDI++Y+
Sbjct: 383 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 442
Query: 524 VAIRGLLKVGRDTEACNLYNDMKEAGINPNAHICNVLLSSFCKERNFESVKHMLQEM 571
IRG+ K G+ EA +L+ + G+ P+ ++S C + V+ + +M
Sbjct: 443 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
BLAST of Lcy06g009850 vs. TAIR 10
Match:
AT1G62720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 172.6 bits (436), Expect = 1.1e-42
Identity = 110/423 (26.00%), Postives = 204/423 (48.23%), Query Frame = 0
Query: 183 DVALKVFKETLLPNFLTFNIVLCNLSKIKDLIGIKDAFRCMLRMGYYPNPGTFEVVLNCF 242
D+ K+ + LP+ + F+ VL ++K K+ + F M G + ++ +V+NC
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 243 CKLGRLAEAYQVLGVMTTFGISMSVNIWTIMVDGFRRLHRTADASSLVKKMEKLGCSPNI 302
C+ R A V+G M FG V + +++GF + +R DA LV KME++G P++
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 303 VTYTTLIKGYMDAQLVSDAFGVLSIIESEGHSPDCVLYNVLIDSLAKIGRFDEALSIFLS 362
V Y T+I G LV+DA + +E +G D V YN L+ L GR+ +A +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 363 FDKQNILPDSYTFSSLLNTLCLSKRFFLLPKLVDGL---FVEVDLVACNSLLSYLGKAGF 422
++I+P+ TF+++++ +F KL + + V+ D+ NSL++ L G
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 423 PSLALELYDEMLDKGLMPDKYSVLGVLTGLCESRRIDEAVHL---------------YNG 482
A ++ D M+ KG +PD + ++ G C+S+R+DE L YN
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 483 ILLNY-----------------TGVDAHIHTVIMGGLIKAGKCHSAIRVFRKILLEENSL 542
I+ Y + + +++++ GL + A+ +F + E L
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 543 DIISYSVAIRGLLKVGRDTEACNLYNDMKEAGINPNAHICNVLLSSFCKERNFESVKHML 571
DI +Y++ I G+ K+G +A +L+ + G+ P+ ++S FC++R ++ +
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 474
BLAST of Lcy06g009850 vs. TAIR 10
Match:
AT1G63330.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 172.2 bits (435), Expect = 1.4e-42
Identity = 120/483 (24.84%), Postives = 228/483 (47.20%), Query Frame = 0
Query: 98 FDYMVGVVSRLMKRYETVNEILGGLESVGNVTKAQTFLLLLRIYWHGGMYELVFEAFDHM 157
F+ ++ +++ MK+++ V + ++ +G T+ +L+ + L M
Sbjct: 13 FNKLLSAIAK-MKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 72
Query: 158 GHCGFTPNTFARNVIMDVLFKVGRADVALKVFKETL----LPNFLTFNIVLCNL---SKI 217
G+ P+ + +++ R A+ + + + P+ +TF ++ L +K
Sbjct: 73 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 132
Query: 218 KDLIGIKDAFRCMLRMGYYPNPGTFEVVLNCFCKLGRLAEAYQVLGVMTTFGISMSVNIW 277
+ + + D M++ G PN T+ VV+N CK G + A+ +L M I V I+
Sbjct: 133 SEAVALVDR---MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 192
Query: 278 TIMVDGFRRLHRTADASSLVKKMEKLGCSPNIVTYTTLIKGYMDAQLVSDAFGVLSIIES 337
++D + DA +L K+ME G PN+VTY++LI SDA +LS +
Sbjct: 193 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 252
Query: 338 EGHSPDCVLYNVLIDSLAKIGRFDEALSIFLSFDKQNILPDSYTFSSLLNTLCLSKRFFL 397
+ +P+ V +N LID+ K G+F EA + K++I PD +T++SL+N C+ R
Sbjct: 253 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 312
Query: 398 LPKLVDGLFVE---VDLVACNSLLSYLGKAGFPSLALELYDEMLDKGLMPDKYSVLGVLT 457
++ + + + DL N+L+ K+ EL+ EM +GL+ D + ++
Sbjct: 313 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 372
Query: 458 GLCESRRIDEAVHLYNGILLNYTGVDAHIHTVIMGGLIKAGKCHSAIRVFRKILLEENSL 517
GL D A ++ ++ + D +++++ GL GK A+ VF + E L
Sbjct: 373 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 432
Query: 518 DIISYSVAIRGLLKVGRDTEACNLYNDMKEAGINPNAHICNVLLSSFCKERNFESVKHML 571
DI Y+ I G+ K G+ + +L+ + G+ PN N ++S C +R + +L
Sbjct: 433 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 491
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q3EDA9 | 2.9e-117 | 40.37 | Putative pentatricopeptide repeat-containing protein At1g16830 OS=Arabidopsis th... | [more] |
Q9LFF1 | 7.4e-44 | 24.78 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q3ECK2 | 5.3e-42 | 25.90 | Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidop... | [more] |
Q9SI78 | 1.5e-41 | 26.00 | Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana OX... | [more] |
Q9C8T7 | 2.0e-41 | 24.84 | Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CES7 | 0.0e+00 | 84.06 | putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 OS=Mom... | [more] |
A0A6J1KFA9 | 0.0e+00 | 83.61 | putative pentatricopeptide repeat-containing protein At1g16830 OS=Cucurbita maxi... | [more] |
A0A0A0M137 | 0.0e+00 | 81.35 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G537540 PE=4 SV=1 | [more] |
A0A6J1EGE1 | 5.4e-308 | 85.60 | putative pentatricopeptide repeat-containing protein At1g16830 OS=Cucurbita mosc... | [more] |
A0A6J1CES3 | 1.2e-278 | 84.96 | putative pentatricopeptide repeat-containing protein At1g16830 isoform X2 OS=Mom... | [more] |
Match Name | E-value | Identity | Description | |
XP_022140090.1 | 0.0e+00 | 84.06 | putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Momor... | [more] |
XP_023001025.1 | 0.0e+00 | 83.61 | putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima... | [more] |
XP_023519013.1 | 0.0e+00 | 84.25 | putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita pepo s... | [more] |
XP_038894703.1 | 0.0e+00 | 82.56 | LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g16... | [more] |
XP_011659004.1 | 0.0e+00 | 81.35 | putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Cucum... | [more] |
Match Name | E-value | Identity | Description | |
AT1G16830.1 | 2.1e-118 | 40.37 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 5.3e-45 | 24.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G62680.1 | 3.8e-43 | 25.90 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G62720.1 | 1.1e-42 | 26.00 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G63330.1 | 1.4e-42 | 24.84 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |