Lcy06g006130 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTCGAATGGTTCCACGATCTGCATCGGATTTCAACAAATTAACCAAAAATGGCCTATCATTTATCAAGTACCTAGAAGCTAAAGCCATCTTGGAAGGCTTGAAGATGGTGAGTGATACCTGTCTTCGGAACAACATCCCTTTGGAAATCGAGTCTGACGCCATAGAAGTCGTCCAAATTCTTTCAGGGACGGCGAAGGATTTATCGGAGACGAAGACGATTACGGACGCCATTCTCGATCTCTCATCTCGATTTCAAGATGTCTCATTTAGACATTGTGGTAGAAATTCCAATACAGTAGCCCACTGTGGGGCAAAGTTTGGTTGTAATTTTGTTTTTGATGTTGTAGACTCTCAGGCAGCCTCCCATTCGTGGGAAAAAGGGCAGTTGTTTTGGGCTCCTGATCTTCCTCCTTGGTTCTTTTAG ATGACTCGAATGGTTCCACGATCTGCATCGGATTTCAACAAATTAACCAAAAATGGCCTATCATTTATCAAGTACCTAGAAGCTAAAGCCATCTTGGAAGGCTTGAAGATGGTGAGTGATACCTGTCTTCGGAACAACATCCCTTTGGAAATCGAGTCTGACGCCATAGAAGTCGTCCAAATTCTTTCAGGGACGGCGAAGGATTTATCGGAGACGAAGACGATTACGGACGCCATTCTCGATCTCTCATCTCGATTTCAAGATGTCTCATTTAGACATTGTGGTAGAAATTCCAATACAGTAGCCCACTGTGGGGCAAAGTTTGGTTGTAATTTTGTTTTTGATGTTGTAGACTCTCAGGCAGCCTCCCATTCGTGGGAAAAAGGGCAGTTGTTTTGGGCTCCTGATCTTCCTCCTTGGTTCTTTTAG ATGACTCGAATGGTTCCACGATCTGCATCGGATTTCAACAAATTAACCAAAAATGGCCTATCATTTATCAAGTACCTAGAAGCTAAAGCCATCTTGGAAGGCTTGAAGATGGTGAGTGATACCTGTCTTCGGAACAACATCCCTTTGGAAATCGAGTCTGACGCCATAGAAGTCGTCCAAATTCTTTCAGGGACGGCGAAGGATTTATCGGAGACGAAGACGATTACGGACGCCATTCTCGATCTCTCATCTCGATTTCAAGATGTCTCATTTAGACATTGTGGTAGAAATTCCAATACAGTAGCCCACTGTGGGGCAAAGTTTGGTTGTAATTTTGTTTTTGATGTTGTAGACTCTCAGGCAGCCTCCCATTCGTGGGAAAAAGGGCAGTTGTTTTGGGCTCCTGATCTTCCTCCTTGGTTCTTTTAG MTRMVPRSASDFNKLTKNGLSFIKYLEAKAILEGLKMVSDTCLRNNIPLEIESDAIEVVQILSGTAKDLSETKTITDAILDLSSRFQDVSFRHCGRNSNTVAHCGAKFGCNFVFDVVDSQAASHSWEKGQLFWAPDLPPWFF Homology
BLAST of Lcy06g006130 vs. ExPASy TrEMBL
Match: A0A803L9N8 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 2.2e-04 Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 0
BLAST of Lcy06g006130 vs. NCBI nr
Match: KAF7814608.1 (putative ZmL1 non-LTR retrotransposon protein [Senna tora]) HSP 1 Score: 63.5 bits (153), Expect = 1.6e-06 Identity = 43/120 (35.83%), Postives = 61/120 (50.83%), Query Frame = 0
BLAST of Lcy06g006130 vs. NCBI nr
Match: XP_021753633.1 (uncharacterized protein LOC110719026 [Chenopodium quinoa]) HSP 1 Score: 62.0 bits (149), Expect = 4.8e-06 Identity = 41/116 (35.34%), Postives = 56/116 (48.28%), Query Frame = 0
BLAST of Lcy06g006130 vs. NCBI nr
Match: KAF7821986.1 (putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Senna tora]) HSP 1 Score: 60.5 bits (145), Expect = 1.4e-05 Identity = 43/127 (33.86%), Postives = 60/127 (47.24%), Query Frame = 0
BLAST of Lcy06g006130 vs. NCBI nr
Match: KAF7822031.1 (putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Senna tora]) HSP 1 Score: 56.6 bits (135), Expect = 2.0e-04 Identity = 39/117 (33.33%), Postives = 53/117 (45.30%), Query Frame = 0
BLAST of Lcy06g006130 vs. NCBI nr
Match: XP_021763631.1 (uncharacterized protein LOC110728264 [Chenopodium quinoa]) HSP 1 Score: 55.5 bits (132), Expect = 4.5e-04 Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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