Lcy06g002350 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g002350
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Down syndrome critical region protein 3 homolog isoform X1
Location	Chr06: 2249565 .. 2252875 (+)
RNA-Seq Expression	Lcy06g002350
Synteny	Lcy06g002350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATGCTATTGTCTTCGCTTCGTCTGGCCCGTTTCAGCTTTCGCGGTTGCAATGCCAGTAGAGCTCAGGCTTTCTCGAACTAATCGAATCTACCGGCCTTCTGTAAGCCTTCTCTTTCCATCTTCAATTCTCCTTATCATCATTCCACTCATCGATTTCTCTCGCTCTTGCAATGTTCAGGAACATCTTCAAGGCCAAATCATCGTCAATTCTCGTTCCTCGATTTCCCACAGTGGAATTCGCCTCGCCGTCAATGGATCCGTCAATTTGCAGGTTCAATACTCTTTTGTTTTGTTTTGTTTTGCTTTGTTTCTTCAAAAATAGTTGCGTACTATGTATTTCAATCAAGTACTATCTGAGCTACCGAACACCTGTTAAGCAACAGAGTTGTACACGGAGGGTTATTGCTTTACCTGTAATTTTAACTCTGTTCTTTTTCTTCTTCCGTTGGATGCATTTTATGGTAAAAAGGTTCGTGGAGGTTCTGCCGGAGTTATTGAGTCGGTTTACGGTGTCATCAAGCCTATTTCGATAGTGTGAGTTGGCTTTCTTTACGATTTTTAAGTGAATTGTGTATTCTGTAGACATAGTAGTTATATGACTTTAGTTGCAAATTCATTTCCGACTTTTGAAGATGACAGCAATCTCTTTATTGTCTACATAATTGCCGATCACAAAAGTAGAAGTTTTCTTTCGTACTTGTTGTGACTTTTGAATAATACAAAATGAAATCAACTAGGATATGGTTAGGGATTGGGGAATTTAATGCTTCCACTAGTGATAACTATTACTGAGCTTCTCTTACTGTCTCCGACCTGAAATTTATATTGGACATGGTTCGCACATCGTTTTATAAACGAGATCAGTTATAGTTTATCCGACTTTTCTATTGATTTTGTTTCCTTCGCCCTCATAATGATAGGAATAGGACCATTGAGGTAAGGCCATCTGGAAAGCTTGCTTCAGGTACAACTGAGGTATAATTGCTGTTGAAAGCTATAAAATTTTAGATTTTTATATGAATCAATGTTATGAATGTTTATTCACTTAGATTGTTCAATTAAATTTGCTCAAATATTTAACTTCCTTATTAAATGATTGCATGTTTTGTATATGGTTATTTTGTGTGGTTGTACCCTTACGGCATGTCATATCTTCTTGACCCTGGATAACAGCCTCTTATGAATGGTGCATGTTGGAGTCGGATATCTTGTGTATTTATATAGTTGCTTGCTTATTTGTTGCCCGAACTTTCAGATGGTTAACTGAACTGATTCCCTCAAAATCTTTCCAGATTCCATTTTCCATAATTCTGAGACAGCCAAGTGAAAACTTCGGAAGATTTTATGAGACTTTTCATGGAACTGACATTAACATTCAGGTGAGTGTTGTGAATCTTTCTACTTTGCGTTTGACTATTCAGACTATGTGTAAATGATTTGGTGTTTTAGTTTTCACTCTTATTCACCTTCCCACTCCAAAAAGAAACGAGATTTCTCTTAACATGAACCTGATATTTTGTCAATTACTGAATAATACGATAGTATTTAGTAACTGTAGATATAAGTAGAGGATACCTACACAAGTCGTTATCTGCCACGATGGAGTTTATAGTTGAAAGTGATACAGGTATGATGTATTTGACACTTCAACATTATATATTTAACACAAGTAAATGAAAATAATTGTTTTTCTTTTGTTCTGTTCCTAGCTGATTTTCTTGAGCGGCCATTGTCGTCTGAGATGGTTATCTTTTACATCACTCAGGATACACAAAGGCATCCACTACTTCCTGAACTAAAATCAGGTTTTCATCATTGTTCCTTTTCTTTCATGTTTTATCTCTTTCAGGTGTGATTTATTTTATTCATTGTCATATGGGAATATTTGCATATAAGCCATCTATGGTAGCATATAGAAGAAGTAAACCATTGCTTATTTATTTTCTATTTTGTTTTATCTTTTTATATTTCAGTATCCTTTTGCTGATGAGAGATACTTCTAAATAGGTGGTTTTCGAGTGACTGGGAAAATGTCAACTCTGTGCTCTCTTTCAGATCCCATCACTGGTGAATTAATAGTTGAAGCATCAACAGTTCCCATTAATTCAATTGACATTCACTTGTGTCGTGTGGAATCAGTCATTCTTGGGGAGAGAATCATAACTGAAACATCTGTGATCCAAACTACCCAGGTATGAGACATCTCATCTTCTCTGTGTATATTAGTTTTTGCCTATACAAAAATTCATATAAAATTCGGATTTCTTTTTATTTTATCACCAGATAGCAGATGGAGATGTCTGTCGCAACATTACTCTGCCTATTTATGCTATACTACCCCGCCTTTTAACTTCCCCAACAGTCTTTGCTGGGTGAGTTACAAATACTATTACTGTTATACTACATTTTCAATCAAATACTATAATTGTGTGATGGGAAGTGAGGACACGCATGGAACCAAATATAGAAACCCACGCTATGTGAGACATCAAACGTCTGAAATAAGCACTTCATGATGCCACGTTCAGCTATTGGACTGGGATTTCTAAAGCATATGTACTAAATTAAGTTCGGCCTTTTCATTTCCCCATATGATTGTAAATTTGCAATGAATGTAATATTGTGTGTCGAATAATTTTATTTCGTTGATGATTGGAAACAACTTTGGTAATTTGTTCCTTCGAAGTTCTCTCTGTGATTGGTATCAGATCTTGTTGAAATGCGGTTTATCAGTTAATGGCGTGTCCACTTGTTTATTCCCTGTCATTCTCATCTGTGACTTGGCATTTGTATTCAGCAAATAACTTGTCCTGATTGTTTTTGACAGTCCATTTTCAATTGAATTCATAGTCTACATCGTTATAACCTTTCAGTCAGAGCTATCAAAATTACATCCCAAGACTGATCCAAGAACTCCAAGACTATGGGTGAGCATCTCTCTCTCGATCGGGTTGTATGAACTTTCTCTTGTTTAACCAATCTAACTTGTTCTCTTGTTTTCAATTCCAGCTTGCAATTGAATCTCTACCCCTTGAGCTTCTTCGAACTCATTGAGACGATTAGTTCAGCAGATCATTATACTGTATTTTGTTTGTCCTCTTGTGGATGATGTAAAATAAATCATATTGTACCTTCATCTTTTGGGTTCTGATTCTGGTTTTTCTTGGAGTGGGGGTTAATGGTCGGTGTAAAGTACCATGTTCAAGACCTAGTTTATGCTGATAATACTATGGTGTTATGTAGATTTTTTCCCCCTTTTTGTATATTTTTTCAGTATATGTCAATATTCATGGATTATTGATCTATGAG

mRNA sequence

ATATGCTATTGTCTTCGCTTCGTCTGGCCCGTTTCAGCTTTCGCGGTTGCAATGCCAGTAGAGCTCAGGCTTTCTCGAACTAATCGAATCTACCGGCCTTCTGAACATCTTCAAGGCCAAATCATCGTCAATTCTCGTTCCTCGATTTCCCACAGTGGAATTCGCCTCGCCGTCAATGGATCCGTCAATTTGCAGGTTCGTGGAGGTTCTGCCGGAGTTATTGAGTCGGTTTACGGTGTCATCAAGCCTATTTCGATAGTGAATAGGACCATTGAGGTAAGGCCATCTGGAAAGCTTGCTTCAGGTACAACTGAGATTCCATTTTCCATAATTCTGAGACAGCCAAGTGAAAACTTCGGAAGATTTTATGAGACTTTTCATGGAACTGACATTAACATTCAGTATTTAGTAACTGTAGATATAAGTAGAGGATACCTACACAAGTCGTTATCTGCCACGATGGAGTTTATAGTTGAAAGTGATACAGCTGATTTTCTTGAGCGGCCATTGTCGTCTGAGATGGTTATCTTTTACATCACTCAGGATACACAAAGGCATCCACTACTTCCTGAACTAAAATCAGGTGGTTTTCGAGTGACTGGGAAAATGTCAACTCTGTGCTCTCTTTCAGATCCCATCACTGGTGAATTAATAGTTGAAGCATCAACAGTTCCCATTAATTCAATTGACATTCACTTGTGTCGTGTGGAATCAGTCATTCTTGGGGAGAGAATCATAACTGAAACATCTGTGATCCAAACTACCCAGATAGCAGATGGAGATGTCTGTCGCAACATTACTCTGCCTATTTATGCTATACTACCCCGCCTTTTAACTTCCCCAACAGTCTTTGCTGGTCAGAGCTATCAAAATTACATCCCAAGACTGATCCAAGAACTCCAAGACTATGGCTTGCAATTGAATCTCTACCCCTTGAGCTTCTTCGAACTCATTGAGACGATTAGTTCAGCAGATCATTATACTGTATTTTGTTTGTCCTCTTGTGGATGATGTAAAATAAATCATATTGTACCTTCATCTTTTGGGTTCTGATTCTGGTTTTTCTTGGAGTGGGGGTTAATGGTCGGTGTAAAGTACCATGTTCAAGACCTAGTTTATGCTGATAATACTATGGTGTTATGTAGATTTTTTCCCCCTTTTTGTATATTTTTTCAGTATATGTCAATATTCATGGATTATTGATCTATGAG

Coding sequence (CDS)

ATGCCAGTAGAGCTCAGGCTTTCTCGAACTAATCGAATCTACCGGCCTTCTGAACATCTTCAAGGCCAAATCATCGTCAATTCTCGTTCCTCGATTTCCCACAGTGGAATTCGCCTCGCCGTCAATGGATCCGTCAATTTGCAGGTTCGTGGAGGTTCTGCCGGAGTTATTGAGTCGGTTTACGGTGTCATCAAGCCTATTTCGATAGTGAATAGGACCATTGAGGTAAGGCCATCTGGAAAGCTTGCTTCAGGTACAACTGAGATTCCATTTTCCATAATTCTGAGACAGCCAAGTGAAAACTTCGGAAGATTTTATGAGACTTTTCATGGAACTGACATTAACATTCAGTATTTAGTAACTGTAGATATAAGTAGAGGATACCTACACAAGTCGTTATCTGCCACGATGGAGTTTATAGTTGAAAGTGATACAGCTGATTTTCTTGAGCGGCCATTGTCGTCTGAGATGGTTATCTTTTACATCACTCAGGATACACAAAGGCATCCACTACTTCCTGAACTAAAATCAGGTGGTTTTCGAGTGACTGGGAAAATGTCAACTCTGTGCTCTCTTTCAGATCCCATCACTGGTGAATTAATAGTTGAAGCATCAACAGTTCCCATTAATTCAATTGACATTCACTTGTGTCGTGTGGAATCAGTCATTCTTGGGGAGAGAATCATAACTGAAACATCTGTGATCCAAACTACCCAGATAGCAGATGGAGATGTCTGTCGCAACATTACTCTGCCTATTTATGCTATACTACCCCGCCTTTTAACTTCCCCAACAGTCTTTGCTGGTCAGAGCTATCAAAATTACATCCCAAGACTGATCCAAGAACTCCAAGACTATGGCTTGCAATTGAATCTCTACCCCTTGAGCTTCTTCGAACTCATTGAGACGATTAGTTCAGCAGATCATTATACTGTATTTTGTTTGTCCTCTTGTGGATGA

Protein sequence

MPVELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESVYGVIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLVTVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGFRVTGKMSTLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQIADGDVCRNITLPIYAILPRLLTSPTVFAGQSYQNYIPRLIQELQDYGLQLNLYPLSFFELIETISSADHYTVFCLSSCG

Homology

[Close]

BLAST of Lcy06g002350 vs. ExPASy Swiss-Prot
Match: O35075 (Vacuolar protein sorting-associated protein 26C OS=Mus musculus OX=10090 GN=Vps26c PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 9.0e-48
Identity = 104/265 (39.25%), Postives = 157/265 (59.25%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESVYG 62
           +++++ R N++Y   E L G ++++S+ S+ H G+ L + G+VNLQ+   S GV E+ Y 
Sbjct: 5   LDIKIKRANKVYHAGEMLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYN 64

Query: 63  VIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLVTV 122
            +KPI I+N TI+V   GK+ SG TE+PF   L          YET+HG  +NIQY +  
Sbjct: 65  SVKPIQIINSTIDVLKPGKIPSGKTEVPFEFPLLVKGSKV--LYETYHGVFVNIQYTLRC 124

Query: 123 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGFRV 182
           D+ R  L K L+ T EFIV S      +  L+   V F IT +T ++ +        F +
Sbjct: 125 DMRRSLLAKDLTKTCEFIVHSAPQ---KGKLTPSPVDFTITPETLQN-VKERASLPKFFI 184

Query: 183 TGKM-STLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQIA 242
            G + ST C+++ P+TGEL+VE S   I SI++ L RVE+    E    + + IQ  QIA
Sbjct: 185 RGHLNSTNCAITQPLTGELVVEHSDAAIRSIELQLVRVETCGCAEGYARDATEIQNIQIA 244

Query: 243 DGDVCRNITLPIYAILPRLLTSPTV 267
           DGD+CRN+++P+Y + PRL T PT+
Sbjct: 245 DGDICRNLSVPLYMVFPRLFTCPTL 263

[Close]

BLAST of Lcy06g002350 vs. ExPASy Swiss-Prot
Match: O14972 (Vacuolar protein sorting-associated protein 26C OS=Homo sapiens OX=9606 GN=VPS26C PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.0e-47
Identity = 106/266 (39.85%), Postives = 154/266 (57.89%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESVYG 62
           +++++ R N++Y   E L G ++++S+ S+ H G+ L + G+VNLQ+   S GV E+ Y 
Sbjct: 5   LDIKIKRANKVYHAGEVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYN 64

Query: 63  VIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLVTV 122
            +KPI I+N TIE+   GK  SG TEIPF   L          YET+HG  +NIQY +  
Sbjct: 65  SVKPIQIINSTIEMVKPGKFPSGKTEIPFEFPLHLKGNKV--LYETYHGVFVNIQYTLRC 124

Query: 123 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYIT-QDTQRHPLLPELKSGGFR 182
           D+ R  L K L+ T EFIV S        P   +  I   T Q+ +   LLP+     F 
Sbjct: 125 DMKRSLLAKDLTKTCEFIVHSAPQKGKFTPSPVDFTITPETLQNVKERALLPK-----FL 184

Query: 183 VTGKM-STLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQI 242
           + G + ST C ++ P+TGEL+VE+S   I S+++ L RVE+    E    + + IQ  QI
Sbjct: 185 LRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQI 244

Query: 243 ADGDVCRNITLPIYAILPRLLTSPTV 267
           ADGDVCR +++PIY + PRL T PT+
Sbjct: 245 ADGDVCRGLSVPIYMVFPRLFTCPTL 263

[Close]

BLAST of Lcy06g002350 vs. ExPASy Swiss-Prot
Match: Q5RF33 (Vacuolar protein sorting-associated protein 26C OS=Pongo abelii OX=9601 GN=VPS26C PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.5e-47
Identity = 107/269 (39.78%), Postives = 155/269 (57.62%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESVYG 62
           +++++ R N++Y   E L G ++++S+ S+ H G+ L + G+VNLQ+   S GV E+ Y 
Sbjct: 5   LDIKIKRANKVYHAGEVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYN 64

Query: 63  VIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLVTV 122
            +KPI I+N  IE+   GK  SG TEIPF   L          YET+HG  +NIQY +  
Sbjct: 65  SVKPIQIINSNIEMVKPGKFPSGKTEIPFEFPLHVKGNKV--LYETYHGVFVNIQYTLRC 124

Query: 123 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYIT----QDTQRHPLLPELKSG 182
           D+ R  L K L+ T EFIV S      +   S   V F IT    Q+ +   LLP+    
Sbjct: 125 DMKRSLLAKDLTKTCEFIVHSAPQ---KGKFSPSPVHFTITPETLQNARERALLPK---- 184

Query: 183 GFRVTGKM-STLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQT 242
            F + G + ST C ++ P+TGEL+VE+S   I S+++ L RVE+    E    + + IQ 
Sbjct: 185 -FLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQN 244

Query: 243 TQIADGDVCRNITLPIYAILPRLLTSPTV 267
            QIADGDVCR +++PIY + PRL T PT+
Sbjct: 245 IQIADGDVCRGLSVPIYMVFPRLFTCPTL 263

[Close]

BLAST of Lcy06g002350 vs. ExPASy Swiss-Prot
Match: Q54DI8 (Vacuolar protein sorting-associated protein 26C OS=Dictyostelium discoideum OX=44689 GN=vps26c PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.5e-44
Identity = 102/299 (34.11%), Postives = 175/299 (58.53%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESVYG 62
           ++L+L + ++IYRP   + G +++NS+  +SHSG+ + V G+V LQ+   S G+ E+ Y 
Sbjct: 5   LDLKLKKIDKIYRPGSKVSGNVVINSKDDMSHSGVTIVVEGTVQLQLSSKSVGLFEAFYN 64

Query: 63  VIKPISIVNRTIEV-RPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLVT 122
            +KPI++++ TI V    GK  +G TE+PF   L +P  N  + Y+T+HG  +NIQY + 
Sbjct: 65  SLKPITLMHYTISVTNGGGKFQAGITELPFEFTL-EPLPN-QQLYDTYHGVFVNIQYSIK 124

Query: 123 VDISRGYLHKSLSATMEFIVE--SDTADFLERPLSSEMVIFYITQDT-QRHPLLPELKSG 182
            D+ RG L K LS T+EFIVE  S   + L +     ++ F IT D+      + +    
Sbjct: 125 CDVKRGILSKDLSKTIEFIVEVPSQNKEVLMKSTPESLITFNITPDSLVNFKKISKADVP 184

Query: 183 GFRVTGKM-STLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQT 242
            F+++G + S +C++++   G +I+E++   I S+++ L RVE+    +    E + IQ 
Sbjct: 185 TFKISGGLVSAICNINEAFQGHMIIESADTVIKSVELQLVRVETCGCADGYAREVTEIQN 244

Query: 243 TQIADGDVCRNITLPIYAILPRLLTSPTVFAGQSYQ-NYIPRLIQELQDYGLQLNLYPL 296
            QIADGD+ RN  +P+Y + PRL T  +  AG++++  +   L+  L+D  L    +P+
Sbjct: 245 IQIADGDIWRNFKIPLYMVFPRLFTCIST-AGKTFKIEFEVNLVIMLEDGHLITENFPI 300

[Close]

BLAST of Lcy06g002350 vs. ExPASy TrEMBL
Match: A0A0A0LT45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042860 PE=3 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 7.7e-135
Identity = 250/267 (93.63%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESVYG 62
           VEL+LSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLA+NGSVNLQVRGGSAGVIESVYG
Sbjct: 4   VELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESVYG 63

Query: 63  VIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLVTV 122
           VIKPISIVNR+I V PSGKLASGT EIPFS+ILRQP+EN G++YETFHGTDINIQYLVTV
Sbjct: 64  VIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYLVTV 123

Query: 123 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGFRV 182
           DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPEL+SGGFRV
Sbjct: 124 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGGFRV 183

Query: 183 TGKMSTLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQIAD 242
           TGKMSTLCSLSDP+TGELIVE S VPINSIDIHLCRVESVILGERIITETSVIQTTQIAD
Sbjct: 184 TGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIAD 243

Query: 243 GDVCRNITLPIYAILPRLLTSPTVFAG 270
           GDVCRNITLPIY ILPRLLT PTVFAG
Sbjct: 244 GDVCRNITLPIYVILPRLLTCPTVFAG 270

[Close]

BLAST of Lcy06g002350 vs. ExPASy TrEMBL
Match: A0A6J1C810 (Down syndrome critical region protein 3 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009075 PE=3 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.3e-134
Identity = 252/269 (93.68%), Postives = 258/269 (95.91%), Query Frame = 0


Query: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESV 60
           MPVELRLSRTNRIYRPSEHLQGQIIVNS SSISHSGIRLAVNGSVNLQ+RGGSAGVIESV
Sbjct: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESV 60

Query: 61  YGVIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLV 120
           YGVIKP  IVN++IEVRPSGKLASGTTEIPFSIILRQPSE  GRFYETFHGT+INIQYLV
Sbjct: 61  YGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLV 120

Query: 121 TVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180
           TVDISRGYLHKSLSAT+EFIVESDTAD LERPLSSEMVIFYITQDTQRHPLLPELKSGGF
Sbjct: 121 TVDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180

Query: 181 RVTGKMSTLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQI 240
           RVTGKMSTLCSLSDPITGEL VEAS VPINSIDIHLCRVESVILGERIITETSVIQ+TQI
Sbjct: 181 RVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI 240

Query: 241 ADGDVCRNITLPIYAILPRLLTSPTVFAG 270
           ADGDVCRNITLPIY I PRLLT PTVFAG
Sbjct: 241 ADGDVCRNITLPIYVIPPRLLTCPTVFAG 269

[Close]

BLAST of Lcy06g002350 vs. ExPASy TrEMBL
Match: A0A6J1EBR4 (Down syndrome critical region protein 3 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431725 PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.9e-134
Identity = 250/269 (92.94%), Postives = 259/269 (96.28%), Query Frame = 0


Query: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESV 60
           M VE+RLSRTNRIYRPSEHLQGQIIVNSRSSISH GI L +NGSVNLQVRGGSAGVIESV
Sbjct: 1   MAVEIRLSRTNRIYRPSEHLQGQIIVNSRSSISHYGISLLLNGSVNLQVRGGSAGVIESV 60

Query: 61  YGVIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLV 120
           YGVIKP+SIVNR+IEVRPSGKL SGTTEIPFS+ILRQPSEN G+FYETFHGTDINIQYLV
Sbjct: 61  YGVIKPLSIVNRSIEVRPSGKLPSGTTEIPFSVILRQPSENLGKFYETFHGTDINIQYLV 120

Query: 121 TVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180
           TV ISRGYLHKSLSAT+EFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF
Sbjct: 121 TVGISRGYLHKSLSATIEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180

Query: 181 RVTGKMSTLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQI 240
           RVTGKM+TLCSLSDPITGEL VEAS VPI+SIDIHLCRVESVILGERIITETSVIQTTQI
Sbjct: 181 RVTGKMATLCSLSDPITGELTVEASAVPISSIDIHLCRVESVILGERIITETSVIQTTQI 240

Query: 241 ADGDVCRNITLPIYAILPRLLTSPTVFAG 270
           ADGDVCRNITLPIYAILPRLLT PTVFAG
Sbjct: 241 ADGDVCRNITLPIYAILPRLLTCPTVFAG 269

[Close]

BLAST of Lcy06g002350 vs. ExPASy TrEMBL
Match: A0A6J1E8A3 (Down syndrome critical region protein 3 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431725 PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.9e-134
Identity = 250/269 (92.94%), Postives = 259/269 (96.28%), Query Frame = 0


Query: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESV 60
           M VE+RLSRTNRIYRPSEHLQGQIIVNSRSSISH GI L +NGSVNLQVRGGSAGVIESV
Sbjct: 1   MAVEIRLSRTNRIYRPSEHLQGQIIVNSRSSISHYGISLLLNGSVNLQVRGGSAGVIESV 60

Query: 61  YGVIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLV 120
           YGVIKP+SIVNR+IEVRPSGKL SGTTEIPFS+ILRQPSEN G+FYETFHGTDINIQYLV
Sbjct: 61  YGVIKPLSIVNRSIEVRPSGKLPSGTTEIPFSVILRQPSENLGKFYETFHGTDINIQYLV 120

Query: 121 TVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180
           TV ISRGYLHKSLSAT+EFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF
Sbjct: 121 TVGISRGYLHKSLSATIEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180

Query: 181 RVTGKMSTLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQI 240
           RVTGKM+TLCSLSDPITGEL VEAS VPI+SIDIHLCRVESVILGERIITETSVIQTTQI
Sbjct: 181 RVTGKMATLCSLSDPITGELTVEASAVPISSIDIHLCRVESVILGERIITETSVIQTTQI 240

Query: 241 ADGDVCRNITLPIYAILPRLLTSPTVFAG 270
           ADGDVCRNITLPIYAILPRLLT PTVFAG
Sbjct: 241 ADGDVCRNITLPIYAILPRLLTCPTVFAG 269

[Close]

BLAST of Lcy06g002350 vs. ExPASy TrEMBL
Match: A0A1S3CMM2 (Down syndrome critical region protein 3 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502664 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 8.5e-134
Identity = 250/267 (93.63%), Postives = 257/267 (96.25%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESVYG 62
           VEL+LSRTNRIYRP EHLQGQIIVNSRSSISHSGIR+A+NGSVNLQVRGGSAGVIESVYG
Sbjct: 4   VELKLSRTNRIYRPCEHLQGQIIVNSRSSISHSGIRIALNGSVNLQVRGGSAGVIESVYG 63

Query: 63  VIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLVTV 122
           VIKPI IVNR+I VRPSGKLASGT EIPFS+ILRQPSEN G+FYETFHGTDINIQYLVTV
Sbjct: 64  VIKPILIVNRSILVRPSGKLASGTNEIPFSVILRQPSENLGKFYETFHGTDINIQYLVTV 123

Query: 123 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGFRV 182
           DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPEL+SGGFRV
Sbjct: 124 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGGFRV 183

Query: 183 TGKMSTLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQIAD 242
           TGKMSTLCSLSDPITGELIVE S V INSIDIHLCRVESVILGERIITETSVIQTTQIAD
Sbjct: 184 TGKMSTLCSLSDPITGELIVETSAVLINSIDIHLCRVESVILGERIITETSVIQTTQIAD 243

Query: 243 GDVCRNITLPIYAILPRLLTSPTVFAG 270
           GDVCRNITLPIY ILPRLLT PTVFAG
Sbjct: 244 GDVCRNITLPIYVILPRLLTCPTVFAG 270

[Close]

BLAST of Lcy06g002350 vs. NCBI nr
Match: XP_038895697.1 (vacuolar protein sorting-associated protein 26C isoform X1 [Benincasa hispida])

HSP 1 Score: 492.3 bits (1266), Expect = 3.2e-135
Identity = 251/269 (93.31%), Postives = 260/269 (96.65%), Query Frame = 0


Query: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESV 60
           MPVEL+LSRTNRIYRPSEHLQG IIVNSRSSISHSGIRLA+NGSVNLQVRGGSAGVIESV
Sbjct: 1   MPVELKLSRTNRIYRPSEHLQGHIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESV 60

Query: 61  YGVIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLV 120
           YGVIKPI+IVNR +EVRPSGKLASGTTEIPFS+ILRQP+E  G+FYETFHGTDINIQYLV
Sbjct: 61  YGVIKPIAIVNRIVEVRPSGKLASGTTEIPFSVILRQPNEILGKFYETFHGTDINIQYLV 120

Query: 121 TVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180
           TVDISRGYLHKSLSAT+EFIVESDTADF+ERPLSSEMVIFYITQDTQRHPLLPELKSGGF
Sbjct: 121 TVDISRGYLHKSLSATIEFIVESDTADFVERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180

Query: 181 RVTGKMSTLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQI 240
           RVTGKMSTLCSLSDPITGELIVE S VPINSIDIHLCRVESVILGERIITETSVIQTTQI
Sbjct: 181 RVTGKMSTLCSLSDPITGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQI 240

Query: 241 ADGDVCRNITLPIYAILPRLLTSPTVFAG 270
           ADGDVCR ITLPIY ILPRLLT PTVFAG
Sbjct: 241 ADGDVCRKITLPIYVILPRLLTCPTVFAG 269

[Close]

BLAST of Lcy06g002350 vs. NCBI nr
Match: XP_004137506.1 (vacuolar protein sorting-associated protein 26C [Cucumis sativus] >KGN64179.1 hypothetical protein Csa_013429 [Cucumis sativus])

HSP 1 Score: 490.0 bits (1260), Expect = 1.6e-134
Identity = 250/267 (93.63%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESVYG 62
           VEL+LSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLA+NGSVNLQVRGGSAGVIESVYG
Sbjct: 4   VELKLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLALNGSVNLQVRGGSAGVIESVYG 63

Query: 63  VIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLVTV 122
           VIKPISIVNR+I V PSGKLASGT EIPFS+ILRQP+EN G++YETFHGTDINIQYLVTV
Sbjct: 64  VIKPISIVNRSILVSPSGKLASGTNEIPFSVILRQPNENLGKYYETFHGTDINIQYLVTV 123

Query: 123 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGFRV 182
           DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPEL+SGGFRV
Sbjct: 124 DISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELRSGGFRV 183

Query: 183 TGKMSTLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQIAD 242
           TGKMSTLCSLSDP+TGELIVE S VPINSIDIHLCRVESVILGERIITETSVIQTTQIAD
Sbjct: 184 TGKMSTLCSLSDPLTGELIVETSAVPINSIDIHLCRVESVILGERIITETSVIQTTQIAD 243

Query: 243 GDVCRNITLPIYAILPRLLTSPTVFAG 270
           GDVCRNITLPIY ILPRLLT PTVFAG
Sbjct: 244 GDVCRNITLPIYVILPRLLTCPTVFAG 270

[Close]

BLAST of Lcy06g002350 vs. NCBI nr
Match: XP_022137704.1 (Down syndrome critical region protein 3 homolog isoform X1 [Momordica charantia])

HSP 1 Score: 489.2 bits (1258), Expect = 2.7e-134
Identity = 252/269 (93.68%), Postives = 258/269 (95.91%), Query Frame = 0


Query: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESV 60
           MPVELRLSRTNRIYRPSEHLQGQIIVNS SSISHSGIRLAVNGSVNLQ+RGGSAGVIESV
Sbjct: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSPSSISHSGIRLAVNGSVNLQIRGGSAGVIESV 60

Query: 61  YGVIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLV 120
           YGVIKP  IVN++IEVRPSGKLASGTTEIPFSIILRQPSE  GRFYETFHGT+INIQYLV
Sbjct: 61  YGVIKPTPIVNKSIEVRPSGKLASGTTEIPFSIILRQPSETLGRFYETFHGTNINIQYLV 120

Query: 121 TVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180
           TVDISRGYLHKSLSAT+EFIVESDTAD LERPLSSEMVIFYITQDTQRHPLLPELKSGGF
Sbjct: 121 TVDISRGYLHKSLSATIEFIVESDTADLLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180

Query: 181 RVTGKMSTLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQI 240
           RVTGKMSTLCSLSDPITGEL VEAS VPINSIDIHLCRVESVILGERIITETSVIQ+TQI
Sbjct: 181 RVTGKMSTLCSLSDPITGELTVEASAVPINSIDIHLCRVESVILGERIITETSVIQSTQI 240

Query: 241 ADGDVCRNITLPIYAILPRLLTSPTVFAG 270
           ADGDVCRNITLPIY I PRLLT PTVFAG
Sbjct: 241 ADGDVCRNITLPIYVIPPRLLTCPTVFAG 269

[Close]

BLAST of Lcy06g002350 vs. NCBI nr
Match: XP_022924207.1 (Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita moschata] >XP_023520407.1 Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 488.0 bits (1255), Expect = 6.1e-134
Identity = 250/269 (92.94%), Postives = 259/269 (96.28%), Query Frame = 0


Query: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESV 60
           M VE+RLSRTNRIYRPSEHLQGQIIVNSRSSISH GI L +NGSVNLQVRGGSAGVIESV
Sbjct: 1   MAVEIRLSRTNRIYRPSEHLQGQIIVNSRSSISHYGISLLLNGSVNLQVRGGSAGVIESV 60

Query: 61  YGVIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLV 120
           YGVIKP+SIVNR+IEVRPSGKL SGTTEIPFS+ILRQPSEN G+FYETFHGTDINIQYLV
Sbjct: 61  YGVIKPLSIVNRSIEVRPSGKLPSGTTEIPFSVILRQPSENLGKFYETFHGTDINIQYLV 120

Query: 121 TVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180
           TV ISRGYLHKSLSAT+EFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF
Sbjct: 121 TVGISRGYLHKSLSATIEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180

Query: 181 RVTGKMSTLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQI 240
           RVTGKM+TLCSLSDPITGEL VEAS VPI+SIDIHLCRVESVILGERIITETSVIQTTQI
Sbjct: 181 RVTGKMATLCSLSDPITGELTVEASAVPISSIDIHLCRVESVILGERIITETSVIQTTQI 240

Query: 241 ADGDVCRNITLPIYAILPRLLTSPTVFAG 270
           ADGDVCRNITLPIYAILPRLLT PTVFAG
Sbjct: 241 ADGDVCRNITLPIYAILPRLLTCPTVFAG 269

[Close]

BLAST of Lcy06g002350 vs. NCBI nr
Match: XP_022924208.1 (Down syndrome critical region protein 3 homolog isoform X2 [Cucurbita moschata] >XP_023520408.1 Down syndrome critical region protein 3 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 488.0 bits (1255), Expect = 6.1e-134
Identity = 250/269 (92.94%), Postives = 259/269 (96.28%), Query Frame = 0


Query: 1   MPVELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESV 60
           M VE+RLSRTNRIYRPSEHLQGQIIVNSRSSISH GI L +NGSVNLQVRGGSAGVIESV
Sbjct: 1   MAVEIRLSRTNRIYRPSEHLQGQIIVNSRSSISHYGISLLLNGSVNLQVRGGSAGVIESV 60

Query: 61  YGVIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENFGRFYETFHGTDINIQYLV 120
           YGVIKP+SIVNR+IEVRPSGKL SGTTEIPFS+ILRQPSEN G+FYETFHGTDINIQYLV
Sbjct: 61  YGVIKPLSIVNRSIEVRPSGKLPSGTTEIPFSVILRQPSENLGKFYETFHGTDINIQYLV 120

Query: 121 TVDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180
           TV ISRGYLHKSLSAT+EFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF
Sbjct: 121 TVGISRGYLHKSLSATIEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGF 180

Query: 181 RVTGKMSTLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQI 240
           RVTGKM+TLCSLSDPITGEL VEAS VPI+SIDIHLCRVESVILGERIITETSVIQTTQI
Sbjct: 181 RVTGKMATLCSLSDPITGELTVEASAVPISSIDIHLCRVESVILGERIITETSVIQTTQI 240

Query: 241 ADGDVCRNITLPIYAILPRLLTSPTVFAG 270
           ADGDVCRNITLPIYAILPRLLT PTVFAG
Sbjct: 241 ADGDVCRNITLPIYAILPRLLTCPTVFAG 269

[Close]

BLAST of Lcy06g002350 vs. TAIR 10
Match: AT1G48550.1 (Vacuolar protein sorting-associated protein 26 )

HSP 1 Score: 391.0 bits (1003), Expect = 9.4e-109
Identity = 194/268 (72.39%), Postives = 231/268 (86.19%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESVYG 62
           V ++LSR+NRIYR SE ++G+I++ S +SISH  IRL+VNGSVNLQVRGGSAGVIES YG
Sbjct: 7   VNVKLSRSNRIYRSSEPVEGKIVIKSATSISHQAIRLSVNGSVNLQVRGGSAGVIESFYG 66

Query: 63  VIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENF-GRFYETFHGTDINIQYLVT 122
           VIKPI IV +TIEV+ SGK+  GTTEIPFS+ LR+P E    +FYETFHGT+INIQYL+T
Sbjct: 67  VIKPIQIVKKTIEVKSSGKIPPGTTEIPFSLNLREPGEGIVEKFYETFHGTNINIQYLLT 126

Query: 123 VDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGFR 182
            DI RGYLHK LSATMEFI+ES   D  ERP+  E+VIFYITQDTQRHPLLP++K+GGFR
Sbjct: 127 ADIPRGYLHKPLSATMEFIIESGRVDLPERPIPPEIVIFYITQDTQRHPLLPDIKTGGFR 186

Query: 183 VTGKMSTLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQIA 242
           VTGK++T CSL DP++GEL VEAS+VPI SIDIHL RVES+I+GERI+TETS+IQ+TQIA
Sbjct: 187 VTGKLATQCSLQDPLSGELTVEASSVPITSIDIHLLRVESIIVGERIVTETSLIQSTQIA 246

Query: 243 DGDVCRNITLPIYAILPRLLTSPTVFAG 270
           DGDVCRN+TLPIY +LPRLL  P+VFAG
Sbjct: 247 DGDVCRNMTLPIYVLLPRLLMCPSVFAG 274

[Close]

BLAST of Lcy06g002350 vs. TAIR 10
Match: AT1G48550.2 (Vacuolar protein sorting-associated protein 26 )

HSP 1 Score: 376.3 bits (965), Expect = 2.4e-104
Identity = 190/268 (70.90%), Postives = 227/268 (84.70%), Query Frame = 0


Query: 3   VELRLSRTNRIYRPSEHLQGQIIVNSRSSISHSGIRLAVNGSVNLQVRGGSAGVIESVYG 62
           V ++LSR+NRIYR SE ++G+I++ S +SISH  IRL+VNGSVNLQVRGGSAGVIES YG
Sbjct: 7   VNVKLSRSNRIYRSSEPVEGKIVIKSATSISHQAIRLSVNGSVNLQVRGGSAGVIESFYG 66

Query: 63  VIKPISIVNRTIEVRPSGKLASGTTEIPFSIILRQPSENF-GRFYETFHGTDINIQYLVT 122
           VIKPI IV +TIEV+ SGK+  GTTEIPFS+ LR+P E    +FYETFHGT+INIQ    
Sbjct: 67  VIKPIQIVKKTIEVKSSGKIPPGTTEIPFSLNLREPGEGIVEKFYETFHGTNINIQ---V 126

Query: 123 VDISRGYLHKSLSATMEFIVESDTADFLERPLSSEMVIFYITQDTQRHPLLPELKSGGFR 182
            +I RGYLHK LSATMEFI+ES   D  ERP+  E+VIFYITQDTQRHPLLP++K+GGFR
Sbjct: 127 SNIPRGYLHKPLSATMEFIIESGRVDLPERPIPPEIVIFYITQDTQRHPLLPDIKTGGFR 186

Query: 183 VTGKMSTLCSLSDPITGELIVEASTVPINSIDIHLCRVESVILGERIITETSVIQTTQIA 242
           VTGK++T CSL DP++GEL VEAS+VPI SIDIHL RVES+I+GERI+TETS+IQ+TQIA
Sbjct: 187 VTGKLATQCSLQDPLSGELTVEASSVPITSIDIHLLRVESIIVGERIVTETSLIQSTQIA 246

Query: 243 DGDVCRNITLPIYAILPRLLTSPTVFAG 270
           DGDVCRN+TLPIY +LPRLL  P+VFAG
Sbjct: 247 DGDVCRNMTLPIYVLLPRLLMCPSVFAG 271

The following BLAST results are available for this feature:

BLAST of Lcy06g002350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O35075	9.0e-48	39.25	Vacuolar protein sorting-associated protein 26C OS=Mus musculus OX=10090 GN=Vps2...	[more]
O14972	2.0e-47	39.85	Vacuolar protein sorting-associated protein 26C OS=Homo sapiens OX=9606 GN=VPS26...	[more]
Q5RF33	4.5e-47	39.78	Vacuolar protein sorting-associated protein 26C OS=Pongo abelii OX=9601 GN=VPS26...	[more]
Q54DI8	3.5e-44	34.11	Vacuolar protein sorting-associated protein 26C OS=Dictyostelium discoideum OX=4...	[more]

BLAST of Lcy06g002350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT45	7.7e-135	93.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042860 PE=3 SV=1	[more]
A0A6J1C810	1.3e-134	93.68	Down syndrome critical region protein 3 homolog isoform X1 OS=Momordica charanti...	[more]
A0A6J1EBR4	2.9e-134	92.94	Down syndrome critical region protein 3 homolog isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1E8A3	2.9e-134	92.94	Down syndrome critical region protein 3 homolog isoform X1 OS=Cucurbita moschata...	[more]
A0A1S3CMM2	8.5e-134	93.63	Down syndrome critical region protein 3 homolog isoform X1 OS=Cucumis melo OX=36...	[more]

BLAST of Lcy06g002350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895697.1	3.2e-135	93.31	vacuolar protein sorting-associated protein 26C isoform X1 [Benincasa hispida]	[more]
XP_004137506.1	1.6e-134	93.63	vacuolar protein sorting-associated protein 26C [Cucumis sativus] >KGN64179.1 hy...	[more]
XP_022137704.1	2.7e-134	93.68	Down syndrome critical region protein 3 homolog isoform X1 [Momordica charantia]	[more]
XP_022924207.1	6.1e-134	92.94	Down syndrome critical region protein 3 homolog isoform X1 [Cucurbita moschata] ...	[more]
XP_022924208.1	6.1e-134	92.94	Down syndrome critical region protein 3 homolog isoform X2 [Cucurbita moschata] ...	[more]

BLAST of Lcy06g002350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48550.1	9.4e-109	72.39	Vacuolar protein sorting-associated protein 26	[more]
AT1G48550.2	2.4e-104	70.90	Vacuolar protein sorting-associated protein 26	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014752	Arrestin-like, C-terminal	GENE3D	2.60.40.640		coord: 2..144 e-value: 2.4E-27 score: 97.2
IPR014752	Arrestin-like, C-terminal	GENE3D	2.60.40.640		coord: 184..276 e-value: 7.0E-18 score: 66.6
IPR028934	Vacuolar protein sorting protein 26 related	PFAM	PF03643	Vps26	coord: 10..266 e-value: 1.7E-30 score: 106.0
IPR028934	Vacuolar protein sorting protein 26 related	PANTHER	PTHR12233	VACUOLAR PROTEIN SORTING 26 RELATED	coord: 3..269
None	No IPR available	PANTHER	PTHR12233:SF2	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 26C	coord: 3..269
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 2..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g002350.1	Lcy06g002350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0042147	retrograde transport, endosome to Golgi
biological_process	GO:0048768	root hair cell tip growth
cellular_component	GO:0005829	cytosol
cellular_component	GO:0010008	endosome membrane
cellular_component	GO:0030904	retromer complex