Lcy05g006860 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g006860
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	auxin-binding protein T85
Location	Chr05: 6516268 .. 6520846 (+)
RNA-Seq Expression	Lcy05g006860
Synteny	Lcy05g006860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATGGTGAAATTGCGGAAGCGATTGGATGGCGGGACTTTCCTTAGCTCTGTTTTTTTGCTTAATTTCCCTCTCTGCAATCTCTGAAGCATCCCGTTGCTCCATCACTGGTGAGTACTTTTCTTCTTCAACCTTCACCCTTTAGCTTCCTGCGCCGATTCGCTCGTCTTGCTTCGTTGTTTTGCTGGTCTGTGCTCTGTGTACTCTAAAGAAGTTGAGTTCTGTCGTATTCAGTGGTCTTGACATTACATGTTTTTGTTCTAATCCTTTGGTTTTCATTTGGGTAGCTTTTGAAACCCTTTTGACCATTTGAGACCTTCAAGTTTCTCATAGAATTTTCCGGCATTTTGAAGAGGGAAATTGGATAAGTGGGAAGTGATAACTTCGTCCTTTAAAGAAGGCTGCATGTTTCTACTTGTCCAGATTTTGGAGATGCGATCGGCTAATGGGTTCCAAAAACCAGTTTTAAGAAATGTTACCTTTAAGTATTACCACCAAGAGGCATAACTATGAGCACAACTGCAGTTATTCGCTTGAATTATGTTTTTTTCACGATATCTTCATTGGGTTAGTGATCCTTTATGCTTTTGTGTTTTAAGATTAGAAATATGGTGGTTTTTGGTTTCTGGGTATTTGAGTATTGAACATTTATGTCATGATAGCATTCAGGAGAAAGAGCTTCAAGTTTCCTACTGAACTAATGGATGTTCTGCTTCGTTTTGAGTATTCAAATTGTTGCATATGAGCATGTCTATGCCTGTAAGCATTTGGATTTGAACCCAAGTGTTTTGATGTAAACTTGTAAAGTTAGGAAAGTGATAGGGACGGCCTGAAATCTGTTCTTTATTTTCCTAACCTGACTGACTTCTGTATGGTAATTCACATATTTTGTTCTTTCTAAATACGTCTGAAGCTTCCTTGATGCACAGGGTTGCCTCTGGTAAGAAACATCAGTGAGCTTCCACAAGATAACTATGGAAGGGGAGGCTTGTCTCACATTACCGTTGCAGGTTCAATATTGCACGGGCTGAAGGAGGTGTGGTGTGTTCATCCTTCTAGTTTCTATAACACAGTGAAGCTTTGTGAAAGATGAAACGAAAGATATTTTTCATTGGTTGCTTAGTTATTTACTGTTCTACTGGCTTTTGCAGGTGGAGGTGTGGCTCCAAACATTTTCTCCGGGATCACGCACACCCATTCACAGGCACTCCTGTGAAGAAGTATTTGTGGTTCTGAAGGGGACTGGAACTCTCTATCTTGCTCCTAGTTCTCATGCAAAGTACCCTGGAACACCAGAAGAATTTTCTATCTATTCAAACAGTACATTTCTCATTCCTGTTAATGATGCTCACCAGGTTCGTTGATCTACTTAAATCTCCTCCTTGCTTCAGAACTATCCATAAATTTTGTGGGCTTAGTTGATATACATCATTTCTGCTTGCTTACAAATTTTAGAATAGTAGACCCAAGTATCATTTGTCTTTGCCAGACACATCAGTGATCAGTCTTGCTATCCTTAGAATTCTTGTTGCCGTTGCAAAGATCATTGGAAAGCTTATGGAAGACTTCTTCCTGAAAGTTGATGAGGTTGATGGGGTTCTTTCCTTGTTAGGTGTAGTAAGGTGCAATATCCACTAGTTAGGGTTGGGTTGGGATAGCTAACTTGGATAAAAAAATCTTAGAGAAGATGCACTAAAGTGAAGGCGAAACTAGGAAATATAGCAAAACAAAGCTAAAGAAAACATTAATTGAACTTCTAAATTAACTCTAAGCAAAACACTCGAAACAAGAGAAAATACTAAATAGAATAGATCACTCCTTTGTCAATTTTTTTTTTTGATAAGAAACCTCAAAAGAGAATTTATTTTATCAAAAGAGAGAATACAACCTTGGGACCCGGGGTGGAGGCACTCCTTTGTCAAATAAAATCCATGAAAAGTGCTAAAGTGATCCCACTTCATGGCATTACCAATACCCATTGGAAAGCTACTGTTCCAATAAATCATATGACGTACTTCTTTCTTTATGGGGGGTGGGAGTGTATTTGCTCCTTATAAAAAAATCTCTAACCTATTTAAAATTTACATCTATTCTTCCCATGTTATTGCCCTTCAGCACGAGCACCGGCACTTGCACTCTAGTTTTTAGGTTTCGAAGAAATTTTTATAATTAATCTTTAGAGTTTTCATCAATGCTTCATTCTATAAAAGGAGCATCTTGAATTAGGGATAGGGGGGATAAGAGGACGTTGTTTCTTGATTTCTAAAGCTCCTTCTCAAGTAAAACTTGCTTGAATGTTCTTGGTTTATCCATGCCCTTTTTTTCTCTAACAATTGGTTATCCCTGTCCCTTTAAACTGCCATTTTGCTAATTGAGAATTTGGAAGGTGAAACTATCTAACAAGGTCAATTTTTTTTTTCTCAATTTGTGGTTATTGAGATTGGTAATTCTTTGGATCTTGAAAGGGGATTTGTGTGTCTATATGTTTTTTGTTGAAAAAAAATTAAATTACAAGGCAAAAGCCTACAAAATCCTCCCACTCCCACTAGGCTCTGCAAGCGTCTTCATTGCATGATTTTCCTGTGAAATGGAATGCTTGCTTTCCATCCCAGCCATGGAAAACGGAAAGAGGCAATCAGGTTGAACTCTGAAGCCTAGATGCATACATACGAATTACTTCCTCTTACCCTGTCTTTGAGGATTTGATGCCTTACCTCCCCTTCTTAGTTAATGAAGTTTTCTGTTTCCTATGAAAAAAAAAATGATGCCATAAGGAATGGGATTATGGTTATACGTTCCTCTCCTTTAGTGTAACAAAGATTCATGAAATCTGACTCTCAGATGAAACATTTCTCCAGTGATCTGTGAACTGTGAACCAATGTGCACGGTATCAGTTTTAACCACTGACCACAATTCAGCCCCTTGACCTTTGTAAATGAGCTTTCCTTGTGATAAATTTGGTATTAAAAATTAGTTTAAATTATCCATTAAGAGTAAATAGTTGAGAGCATCAAAGAATTTGCATCTTGTTCCAAATGCAAATGCAAATTCTGGATTGACACTTTGCAGGTTAGTTTGAAAATGATTGATCGATTGACATTACAATGGTCATTTGGTGGGACCAGGAGGAGGAACTAGTTGTTGACATTGCTGAAGTTGTAGAGGAATTTTATTAACGAGGAAACAAAAAATTGTCCTTGGAAAATTTGAATTTCTAGTATTCATTTTGCCATTAATTTCATTAGGATCGGATGTTATTTACTGTTAACGACAGGACAAGAAAAGTGCACTGATCAAGCTTGCTCTTGTACCTCTAGAATCCTACGATGTGGTTTTGGTGTTTGTTTGCAGTACTTGGTTTTATTATGTTGCCATTTTGACCTTATTTGGATTTTTTTTTCATCGGTTTAGAAAATAGACCACAGTGCTCGTAACAATTCCCAACTTGAACCAATACTCTGATTTAACTTGAATGTTTAACCATTAACACAGGTCTGGAATACGAATGAACATGAGGATTTACAGATGCTTGTCATCATTTCTAGGCCACCAGTTAAAGTGTGCGTATTTTTCCTTCCATTTTCATTCTATATTTCATCTTTATTTGTTTTTAATTGATTACAGATGGGTCTAATTTGAGCTTCCTGTGGTTTAAAGAAGCTAATTCATGGATCTTAATGAATTATACACGCGCGCGAGCGCGCACACGCACATCTAGGTCAATTCGACTTAACAATATGCTTACTTAACTATATCGATCTTTTGAGGCAGCAATTTCAAGCTGCTTGTAAGGCTCTAAGACTCTTGAACAATCAAGACACCATTGGCTTAGACCAAGGAATAAAGACTACAAAATGTCAAAAAATTTGATCTTCTATTTCTTCAGTCACAGGTTGCTTTTCCGGTTTGCTTGCAGGTTTATTTATGATGACTGGTTCATGCCCCACACTGCAGCAAGATTGAAGTTCCCCTACTATTGGGATGAACAGTGTTTCGAAGCGCCTGTAAAGGATGAACTTTGATGTTGATCGAAGTTGTTTTCACCTTCGACATGAAGTATAAAGTCGAACTCCCAAGAATACAGTGGAATATAAGGAACAATCAATCTTACTGTCATGGAATATAGTGTGAAGATCTTGAATCTGCATTGTTCTACTTCATATTTCTGGTTTTGTTAATAAAACATCATATTCCCCCGTCTTTGCTCATACACCATAGCAATGACCGAAAAAAGCGAGTCTTTTGCTAGTCACGAGTTACGTCGTACCATCCTCAAACCAATAGACACAAAACATGTGAAAGGTCTCATGGAAGAACATTCGAGACATTTGATTGTGGATGAAAGATCTTTAGGCCTAGTAAGGTTCTATTTGAGTAGAGGAGTATCAACTTTCAAACTATAGCTAGGATTTTCGAAGTGTTCGTTCTATGTTACAAGTGATGGATCGAGCCGAACTTAAGTAGTTAGATATTAGTGTTTTCTTTCCTGGGTTATAGGTTTGGACCTAGGTTCAAAATTCTTCCTTACGAGTTTGATAAAAAATTCGTTTGATAATCTTCAGCATTTTACTTTTAGT

mRNA sequence

AAAAATGGTGAAATTGCGGAAGCGATTGGATGGCGGGACTTTCCTTAGCTCTGTTTTTTTGCTTAATTTCCCTCTCTGCAATCTCTGAAGCATCCCGTTGCTCCATCACTGGGTTGCCTCTGGTAAGAAACATCAGTGAGCTTCCACAAGATAACTATGGAAGGGGAGGCTTGTCTCACATTACCGTTGCAGGTTCAATATTGCACGGGCTGAAGGAGGTGGAGGTGTGGCTCCAAACATTTTCTCCGGGATCACGCACACCCATTCACAGGCACTCCTGTGAAGAAGTATTTGTGGTTCTGAAGGGGACTGGAACTCTCTATCTTGCTCCTAGTTCTCATGCAAAGTACCCTGGAACACCAGAAGAATTTTCTATCTATTCAAACAGTACATTTCTCATTCCTGTTAATGATGCTCACCAGGTCTGGAATACGAATGAACATGAGGATTTACAGATGCTTGTCATCATTTCTAGGCCACCAGTTAAAGTGTTTATTTATGATGACTGGTTCATGCCCCACACTGCAGCAAGATTGAAGTTCCCCTACTATTGGGATGAACAGTGTTTCGAAGCGCCTGTAAAGGATGAACTTTGATGTTGATCGAAGTTGTTTTCACCTTCGACATGAAGTATAAAGTCGAACTCCCAAGAATACAGTGGAATATAAGGAACAATCAATCTTACTGTCATGGAATATAGTGTGAAGATCTTGAATCTGCATTGTTCTACTTCATATTTCTGGTTTTGTTAATAAAACATCATATTCCCCCGTCTTTGCTCATACACCATAGCAATGACCGAAAAAAGCGAGTCTTTTGCTAGTCACGAGTTACGTCGTACCATCCTCAAACCAATAGACACAAAACATGTGAAAGGTCTCATGGAAGAACATTCGAGACATTTGATTGTGGATGAAAGATCTTTAGGCCTAGTAAGGTTCTATTTGAGTAGAGGAGTATCAACTTTCAAACTATAGCTAGGATTTTCGAAGTGTTCGTTCTATGTTACAAGTGATGGATCGAGCCGAACTTAAGTAGTTAGATATTAGTGTTTTCTTTCCTGGGTTATAGGTTTGGACCTAGGTTCAAAATTCTTCCTTACGAGTTTGATAAAAAATTCGTTTGATAATCTTCAGCATTTTACTTTTAGT

Coding sequence (CDS)

ATGGCGGGACTTTCCTTAGCTCTGTTTTTTTGCTTAATTTCCCTCTCTGCAATCTCTGAAGCATCCCGTTGCTCCATCACTGGGTTGCCTCTGGTAAGAAACATCAGTGAGCTTCCACAAGATAACTATGGAAGGGGAGGCTTGTCTCACATTACCGTTGCAGGTTCAATATTGCACGGGCTGAAGGAGGTGGAGGTGTGGCTCCAAACATTTTCTCCGGGATCACGCACACCCATTCACAGGCACTCCTGTGAAGAAGTATTTGTGGTTCTGAAGGGGACTGGAACTCTCTATCTTGCTCCTAGTTCTCATGCAAAGTACCCTGGAACACCAGAAGAATTTTCTATCTATTCAAACAGTACATTTCTCATTCCTGTTAATGATGCTCACCAGGTCTGGAATACGAATGAACATGAGGATTTACAGATGCTTGTCATCATTTCTAGGCCACCAGTTAAAGTGTTTATTTATGATGACTGGTTCATGCCCCACACTGCAGCAAGATTGAAGTTCCCCTACTATTGGGATGAACAGTGTTTCGAAGCGCCTGTAAAGGATGAACTTTGA

Protein sequence

MAGLSLALFFCLISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHGLKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNSTFLIPVNDAHQVWNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPVKDEL

Homology

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BLAST of Lcy05g006860 vs. ExPASy Swiss-Prot
Match: P33490 (Auxin-binding protein T85 OS=Nicotiana tabacum OX=4097 GN=T85 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.5e-82
Identity = 137/177 (77.40%), Postives = 157/177 (88.70%), Query Frame = 0


Query: 13  ISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHGLKEVEVWLQTFS 72
           + L A +EAS+CSI GLPLVRNISELPQ+NYGR GLSH T+AGS+LHG+KE+EVWLQTF+
Sbjct: 11  VLLFATAEASQCSINGLPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEVWLQTFA 70

Query: 73  PGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNSTFLIPVNDAHQV 132
           PGSRTPIHRHSCEE+FVVLKG G LYL PSSH+KYPG P+EF I+ NSTF IPVND HQV
Sbjct: 71  PGSRTPIHRHSCEEIFVVLKGQGILYLTPSSHSKYPGNPQEFHIFPNSTFHIPVNDVHQV 130

Query: 133 WNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPV-KDEL 189
           WNT EHEDLQ+LV+ISRPPVKVF+YDDW MPHTAA+LKFPYYWDE+C++    KDEL
Sbjct: 131 WNTGEHEDLQVLVVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSWKDEL 187

[Close]

BLAST of Lcy05g006860 vs. ExPASy Swiss-Prot
Match: P33491 (Auxin-binding protein T92 OS=Nicotiana tabacum OX=4097 GN=T92 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.8e-80
Identity = 133/173 (76.88%), Postives = 152/173 (87.86%), Query Frame = 0


Query: 17  AISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHGLKEVEVWLQTFSPGSR 76
           A +EAS CSI GLPLVRNISELPQ+NYGR GLSH T+AGS+LHG+KE+EVWLQTF+PG R
Sbjct: 15  ATAEASHCSINGLPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEVWLQTFAPGFR 74

Query: 77  TPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNSTFLIPVNDAHQVWNTN 136
           TPIHRHSCEE+F+VLKG GTLYL PSSH+KYPG P+EF I+ NSTF IPVND HQVWNT 
Sbjct: 75  TPIHRHSCEEIFIVLKGQGTLYLTPSSHSKYPGNPQEFHIFPNSTFHIPVNDVHQVWNTG 134

Query: 137 EHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPV-KDEL 189
           E EDLQ+L +ISRPPVKVF+YDDW MPHTAA+LKFPYYWDE+C++    KDEL
Sbjct: 135 EQEDLQVLDVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSRKDEL 187

[Close]

BLAST of Lcy05g006860 vs. ExPASy Swiss-Prot
Match: P33487 (Auxin-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=ERABP1 PE=1 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.5e-74
Identity = 132/185 (71.35%), Postives = 154/185 (83.24%), Query Frame = 0


Query: 4   LSLALFFCLISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHGLKE 63
           ++L LF+     S  S  + C I GLP+VRNIS+LPQDNYGR GLSH+TVAGS+LHG+KE
Sbjct: 20  VALLLFY----FSETSLGAPCPINGLPIVRNISDLPQDNYGRPGLSHMTVAGSVLHGMKE 79

Query: 64  VEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNSTFL 123
           VE+WLQTF+PGS TPIHRHSCEEVFVVLKG+GTLYLA  +H  +PG P EF I++NST  
Sbjct: 80  VEIWLQTFAPGSETPIHRHSCEEVFVVLKGSGTLYLA-ETHGNFPGKPIEFPIFANSTIH 139

Query: 124 IPVNDAHQVWNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCFEAP 183
           IP+NDAHQV NT  HEDLQ+LVIISRPP+K+FIY+DWFMPHTAARLKFPYYWDEQC +  
Sbjct: 140 IPINDAHQVKNTG-HEDLQVLVIISRPPIKIFIYEDWFMPHTAARLKFPYYWDEQCIQES 198

Query: 184 VKDEL 189
            KDEL
Sbjct: 200 QKDEL 198

[Close]

BLAST of Lcy05g006860 vs. ExPASy Swiss-Prot
Match: P33488 (Auxin-binding protein 4 OS=Zea mays OX=4577 GN=ABP4 PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 3.9e-67
Identity = 117/158 (74.05%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 31  LVRNISELPQDNYGRGGLSHITVAGSILHGLKEVEVWLQTFSPGSRTPIHRHSCEEVFVV 90
           LVR+IS + Q NYGR G SHITV G++ HG KEVEVWLQTF PG RTPIHRHSCEEVF+V
Sbjct: 49  LVRDISRMQQRNYGREGFSHITVTGALAHGTKEVEVWLQTFGPGQRTPIHRHSCEEVFIV 108

Query: 91  LKGTGTLYLAPSSHAKYPGTPEEFSIYSNSTFLIPVNDAHQVWNTNEHEDLQMLVIISRP 150
           LKG GTL L  SS  KYPG P+E  ++ N+TF IPVND HQVWN+NEHEDLQ+LVIISRP
Sbjct: 109 LKGKGTLLLG-SSSLKYPGQPQEVPVFQNTTFSIPVNDPHQVWNSNEHEDLQVLVIISRP 168

Query: 151 PVKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPVKDEL 189
           PVK+FIYDDW MPHTAA+LKFPY+WDE C  AP KDEL
Sbjct: 169 PVKIFIYDDWSMPHTAAKLKFPYFWDEDCLPAP-KDEL 204

[Close]

BLAST of Lcy05g006860 vs. ExPASy Swiss-Prot
Match: P13689 (Auxin-binding protein 1 OS=Zea mays OX=4577 GN=ABP1 PE=1 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.7e-65
Identity = 121/188 (64.36%), Postives = 145/188 (77.13%), Query Frame = 0


Query: 1   MAGLSLALFFCLISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60
           +AG+ +A+   L++ S +  A    +    LVR+IS++PQ +YG  GLSHITVAG++ HG
Sbjct: 19  LAGVGVAV---LLAASFLPVAESSCVRDNSLVRDISQMPQSSYGIEGLSHITVAGALNHG 78

Query: 61  LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNS 120
           +KEVEVWLQT SPG RTPIHRHSCEEVF VLKG GTL L  SS  KYPG P+E   + N+
Sbjct: 79  MKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTL-LMGSSSLKYPGQPQEIPFFQNT 138

Query: 121 TFLIPVNDAHQVWNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TF IPVND HQVWN++EHEDLQ+LVIISRPP K+F+YDDW MPHTAA LKFP+ WDE CF
Sbjct: 139 TFSIPVNDPHQVWNSDEHEDLQVLVIISRPPAKIFLYDDWSMPHTAAVLKFPFVWDEDCF 198

Query: 181 EAPVKDEL 189
           EA  KDEL
Sbjct: 199 EA-AKDEL 201

[Close]

BLAST of Lcy05g006860 vs. ExPASy TrEMBL
Match: A0A6J1JQ76 (auxin-binding protein T85 OS=Cucurbita maxima OX=3661 GN=LOC111488844 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 3.8e-97
Identity = 173/188 (92.02%), Postives = 177/188 (94.15%), Query Frame = 0


Query: 1   MAGLSLALFFCLISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60
           MAGLSLAL  CLI L AISEASRCSI GLPLVRNISELPQDNYGRGGLSHITVAGS+LHG
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNS 120
           LKEVEVWLQTFSPGS TPIHRHSCEEVFVVLKGTGTL+LAPSSH KYPGTP+EFSIYSN 
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNC 120

Query: 121 TFLIPVNDAHQVWNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TF IPVNDAHQ+WNTNEHEDLQMLVIISRPP KVFIYDDW MPHTAARLKFPYYWDEQCF
Sbjct: 121 TFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPVKDEL 189
           EAPVKDEL
Sbjct: 181 EAPVKDEL 188

[Close]

BLAST of Lcy05g006860 vs. ExPASy TrEMBL
Match: A0A6J1GNG5 (auxin-binding protein T85 OS=Cucurbita moschata OX=3662 GN=LOC111456045 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.4e-96
Identity = 171/188 (90.96%), Postives = 177/188 (94.15%), Query Frame = 0


Query: 1   MAGLSLALFFCLISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60
           MAGLSLAL  CLI L AISEASRCSI GLPLVRNISELPQDNYGRGGLSHITVAGS+LHG
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNS 120
           LKEVEVWLQTFSPGS TPIHRHSCEEVF+VLKGTGTL+LAPSSH KYPGTP+EFSIYSN 
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNC 120

Query: 121 TFLIPVNDAHQVWNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TF IPVNDAHQ+WNTNEHEDLQMLVIISRPP KVFIY+DW MPHTAARLKFPYYWDEQCF
Sbjct: 121 TFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPVKDEL 189
           EAPVKDEL
Sbjct: 181 EAPVKDEL 188

[Close]

BLAST of Lcy05g006860 vs. ExPASy TrEMBL
Match: A0A6J1DA75 (auxin-binding protein T85 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018456 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.2e-96
Identity = 171/188 (90.96%), Postives = 175/188 (93.09%), Query Frame = 0


Query: 1   MAGLSLALFFCLISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60
           MAGL LAL FC I   AISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG
Sbjct: 1   MAGLHLALIFCSIFFPAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60

Query: 61  LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNS 120
           LKEVEVWLQTFSPGS TPIHRHSCEEVFVVLKGTGTLYLAP SH KYPGTP+EFSIYSNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLAPESHEKYPGTPKEFSIYSNS 120

Query: 121 TFLIPVNDAHQVWNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TF+IP+NDAHQVWNTNEHEDLQMLVIISRPP KVFIY+DW MPHTAARLKFPY WDEQCF
Sbjct: 121 TFIIPINDAHQVWNTNEHEDLQMLVIISRPPAKVFIYNDWSMPHTAARLKFPYSWDEQCF 180

Query: 181 EAPVKDEL 189
           E PVKDEL
Sbjct: 181 EPPVKDEL 188

[Close]

BLAST of Lcy05g006860 vs. ExPASy TrEMBL
Match: A0A1S3BS71 (auxin-binding protein T85 OS=Cucumis melo OX=3656 GN=6D05 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94
Identity = 172/189 (91.01%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 1   MAGLSLALFFCLISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60
           MAG S AL FC I L AI+EASRCSI GLPLVRNISELPQDNYGRGGLSHITVAGS+LHG
Sbjct: 1   MAGFSFALSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNS 120
           LKEVEVWLQTFSPGS TPIHRHSCEEVFVVLKGTGTLY APSSH KYPGTP+EF IYSNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120

Query: 121 TFLIPVNDAHQVWNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TFLIPVNDAHQV NTNEHEDLQMLVIISRPP KVFIYDDWFMPHTAARLKFPYYWDEQCF
Sbjct: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180

Query: 181 EA-PVKDEL 189
           EA PVKDEL
Sbjct: 181 EAPPVKDEL 189

[Close]

BLAST of Lcy05g006860 vs. ExPASy TrEMBL
Match: A0A0A0K905 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392300 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.3e-92
Identity = 170/189 (89.95%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MAGLSLALFFCLISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60
           MA  SLAL FC I L AI+EASRCSI G+PLVRNISELPQDNYGRGGLSHITVAGS+LHG
Sbjct: 1   MAVFSLALSFCSIFLFAIAEASRCSIIGVPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNS 120
           LKEVEVWLQTFSPGS TPIHRHSCEEVFVVLKGTGTLY APSSH K PGTP+EF IYSNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKCPGTPKEFPIYSNS 120

Query: 121 TFLIPVNDAHQVWNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TFLIPVNDAHQV NTNEHEDLQMLVIISRPP KVFIYDDWFMPHTAARLKFPYYWDEQCF
Sbjct: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180

Query: 181 EA-PVKDEL 189
           EA PVKDEL
Sbjct: 181 EAPPVKDEL 189

[Close]

BLAST of Lcy05g006860 vs. NCBI nr
Match: XP_038896169.1 (auxin-binding protein T85 [Benincasa hispida])

HSP 1 Score: 372.1 bits (954), Expect = 2.9e-99
Identity = 177/188 (94.15%), Postives = 179/188 (95.21%), Query Frame = 0


Query: 1   MAGLSLALFFCLISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60
           MAGLSLAL FCLI L AISEASRCSI GLPLVRNISELPQDNYGRGG SHITVAGS+LHG
Sbjct: 3   MAGLSLALSFCLIFLFAISEASRCSIIGLPLVRNISELPQDNYGRGGFSHITVAGSLLHG 62

Query: 61  LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNS 120
           LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSH KYPGTP+EF IYSNS
Sbjct: 63  LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHEKYPGTPKEFPIYSNS 122

Query: 121 TFLIPVNDAHQVWNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TFLIPVNDAHQVWNTNEHEDLQML IISRPP KVFIYDDWFMPHTAARLKFPYYWDEQCF
Sbjct: 123 TFLIPVNDAHQVWNTNEHEDLQMLAIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 182

Query: 181 EAPVKDEL 189
           EAPVKDEL
Sbjct: 183 EAPVKDEL 190

[Close]

BLAST of Lcy05g006860 vs. NCBI nr
Match: XP_022992557.1 (auxin-binding protein T85 [Cucurbita maxima])

HSP 1 Score: 364.0 bits (933), Expect = 7.8e-97
Identity = 173/188 (92.02%), Postives = 177/188 (94.15%), Query Frame = 0


Query: 1   MAGLSLALFFCLISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60
           MAGLSLAL  CLI L AISEASRCSI GLPLVRNISELPQDNYGRGGLSHITVAGS+LHG
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNS 120
           LKEVEVWLQTFSPGS TPIHRHSCEEVFVVLKGTGTL+LAPSSH KYPGTP+EFSIYSN 
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNC 120

Query: 121 TFLIPVNDAHQVWNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TF IPVNDAHQ+WNTNEHEDLQMLVIISRPP KVFIYDDW MPHTAARLKFPYYWDEQCF
Sbjct: 121 TFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPVKDEL 189
           EAPVKDEL
Sbjct: 181 EAPVKDEL 188

[Close]

BLAST of Lcy05g006860 vs. NCBI nr
Match: XP_022953527.1 (auxin-binding protein T85 [Cucurbita moschata] >KAG6575883.1 Auxin-binding protein T85, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 361.3 bits (926), Expect = 5.0e-96
Identity = 171/188 (90.96%), Postives = 177/188 (94.15%), Query Frame = 0


Query: 1   MAGLSLALFFCLISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60
           MAGLSLAL  CLI L AISEASRCSI GLPLVRNISELPQDNYGRGGLSHITVAGS+LHG
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNS 120
           LKEVEVWLQTFSPGS TPIHRHSCEEVF+VLKGTGTL+LAPSSH KYPGTP+EFSIYSN 
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNC 120

Query: 121 TFLIPVNDAHQVWNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TF IPVNDAHQ+WNTNEHEDLQMLVIISRPP KVFIY+DW MPHTAARLKFPYYWDEQCF
Sbjct: 121 TFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPVKDEL 189
           EAPVKDEL
Sbjct: 181 EAPVKDEL 188

[Close]

BLAST of Lcy05g006860 vs. NCBI nr
Match: XP_022150242.1 (auxin-binding protein T85 isoform X2 [Momordica charantia])

HSP 1 Score: 360.5 bits (924), Expect = 8.6e-96
Identity = 171/188 (90.96%), Postives = 175/188 (93.09%), Query Frame = 0


Query: 1   MAGLSLALFFCLISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60
           MAGL LAL FC I   AISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG
Sbjct: 1   MAGLHLALIFCSIFFPAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60

Query: 61  LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNS 120
           LKEVEVWLQTFSPGS TPIHRHSCEEVFVVLKGTGTLYLAP SH KYPGTP+EFSIYSNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLAPESHEKYPGTPKEFSIYSNS 120

Query: 121 TFLIPVNDAHQVWNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TF+IP+NDAHQVWNTNEHEDLQMLVIISRPP KVFIY+DW MPHTAARLKFPY WDEQCF
Sbjct: 121 TFIIPINDAHQVWNTNEHEDLQMLVIISRPPAKVFIYNDWSMPHTAARLKFPYSWDEQCF 180

Query: 181 EAPVKDEL 189
           E PVKDEL
Sbjct: 181 EPPVKDEL 188

[Close]

BLAST of Lcy05g006860 vs. NCBI nr
Match: XP_023549483.1 (auxin-binding protein T85 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 171/188 (90.96%), Postives = 176/188 (93.62%), Query Frame = 0


Query: 1   MAGLSLALFFCLISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60
           MAGLSLA+  CLI L AISEAS CSI GLPLVRNISELPQDNYGRGGLSHITVAGS+LHG
Sbjct: 1   MAGLSLAVSLCLIFLPAISEASPCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNS 120
           LKEVEVWLQTFSPGS TPIHRHSCEEVFVVLKGTGTL+LAPSSH KYPGTP+EFSIYSN 
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNC 120

Query: 121 TFLIPVNDAHQVWNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TF IPVNDAHQ+WNTNEHEDLQMLVIISRPP KVFIYDDW MPHTAARLKFPYYWDEQCF
Sbjct: 121 TFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPVKDEL 189
           EAPVKDEL
Sbjct: 181 EAPVKDEL 188

[Close]

BLAST of Lcy05g006860 vs. TAIR 10
Match: AT4G02980.1 (endoplasmic reticulum auxin binding protein 1 )

HSP 1 Score: 279.6 bits (714), Expect = 1.8e-75
Identity = 132/185 (71.35%), Postives = 154/185 (83.24%), Query Frame = 0


Query: 4   LSLALFFCLISLSAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHGLKE 63
           ++L LF+     S  S  + C I GLP+VRNIS+LPQDNYGR GLSH+TVAGS+LHG+KE
Sbjct: 20  VALLLFY----FSETSLGAPCPINGLPIVRNISDLPQDNYGRPGLSHMTVAGSVLHGMKE 79

Query: 64  VEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHAKYPGTPEEFSIYSNSTFL 123
           VE+WLQTF+PGS TPIHRHSCEEVFVVLKG+GTLYLA  +H  +PG P EF I++NST  
Sbjct: 80  VEIWLQTFAPGSETPIHRHSCEEVFVVLKGSGTLYLA-ETHGNFPGKPIEFPIFANSTIH 139

Query: 124 IPVNDAHQVWNTNEHEDLQMLVIISRPPVKVFIYDDWFMPHTAARLKFPYYWDEQCFEAP 183
           IP+NDAHQV NT  HEDLQ+LVIISRPP+K+FIY+DWFMPHTAARLKFPYYWDEQC +  
Sbjct: 140 IPINDAHQVKNTG-HEDLQVLVIISRPPIKIFIYEDWFMPHTAARLKFPYYWDEQCIQES 198

Query: 184 VKDEL 189
            KDEL
Sbjct: 200 QKDEL 198

The following BLAST results are available for this feature:

BLAST of Lcy05g006860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33490	1.5e-82	77.40	Auxin-binding protein T85 OS=Nicotiana tabacum OX=4097 GN=T85 PE=3 SV=1	[more]
P33491	1.8e-80	76.88	Auxin-binding protein T92 OS=Nicotiana tabacum OX=4097 GN=T92 PE=3 SV=1	[more]
P33487	2.5e-74	71.35	Auxin-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=ERABP1 PE=1 SV=1	[more]
P33488	3.9e-67	74.05	Auxin-binding protein 4 OS=Zea mays OX=4577 GN=ABP4 PE=2 SV=1	[more]
P13689	3.7e-65	64.36	Auxin-binding protein 1 OS=Zea mays OX=4577 GN=ABP1 PE=1 SV=1	[more]

BLAST of Lcy05g006860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JQ76	3.8e-97	92.02	auxin-binding protein T85 OS=Cucurbita maxima OX=3661 GN=LOC111488844 PE=4 SV=1	[more]
A0A6J1GNG5	2.4e-96	90.96	auxin-binding protein T85 OS=Cucurbita moschata OX=3662 GN=LOC111456045 PE=4 SV=...	[more]
A0A6J1DA75	4.2e-96	90.96	auxin-binding protein T85 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A1S3BS71	1.3e-94	91.01	auxin-binding protein T85 OS=Cucumis melo OX=3656 GN=6D05 PE=4 SV=1	[more]
A0A0A0K905	1.3e-92	89.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392300 PE=4 SV=1	[more]

BLAST of Lcy05g006860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896169.1	2.9e-99	94.15	auxin-binding protein T85 [Benincasa hispida]	[more]
XP_022992557.1	7.8e-97	92.02	auxin-binding protein T85 [Cucurbita maxima]	[more]
XP_022953527.1	5.0e-96	90.96	auxin-binding protein T85 [Cucurbita moschata] >KAG6575883.1 Auxin-binding prote...	[more]
XP_022150242.1	8.6e-96	90.96	auxin-binding protein T85 isoform X2 [Momordica charantia]	[more]
XP_023549483.1	1.1e-95	90.96	auxin-binding protein T85 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy05g006860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02980.1	1.8e-75	71.35	endoplasmic reticulum auxin binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000526	Auxin-binding protein	PRINTS	PR00655	AUXINBINDNGP	coord: 50..70 score: 79.22 coord: 73..97 score: 88.36 coord: 104..117 score: 55.19 coord: 117..132 score: 71.02 coord: 30..49 score: 75.0 coord: 160..179 score: 82.27 coord: 138..160 score: 84.19
IPR000526	Auxin-binding protein	PFAM	PF02041	Auxin_BP	coord: 21..188 e-value: 2.1E-99 score: 330.1
IPR000526	Auxin-binding protein	PANTHER	PTHR37236	AUXIN-BINDING PROTEIN 1	coord: 7..188
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 24..188 e-value: 2.9E-65 score: 220.4
None	No IPR available	PANTHER	PTHR37236:SF1	AUXIN-BINDING PROTEIN 1	coord: 7..188
None	No IPR available	CDD	cd02220	cupin_ABP1	coord: 30..181 e-value: 2.83204E-118 score: 329.76
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 29..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g006860.1	Lcy05g006860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0051781	positive regulation of cell division
biological_process	GO:0045793	positive regulation of cell size
biological_process	GO:0032877	positive regulation of DNA endoreduplication
biological_process	GO:0009826	unidimensional cell growth
cellular_component	GO:0005788	endoplasmic reticulum lumen
molecular_function	GO:0010011	auxin binding