Lcy05g006540 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g006540
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	rRNA-processing protein FYV7
Location	Chr05: 6136368 .. 6140442 (+)
RNA-Seq Expression	Lcy05g006540
Synteny	Lcy05g006540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAGCTGTTTCACTTTCCCTCCCTGTTCTGTTTTTTGCCCTAATTCTAATTGTTCTTAATTTCATTGAATCTCTCAGCAAGTTCTCTATCCAACAATGAAGAAGGGAACTGGAAAAGACGAAGAAAAGAGTCGCCCCAAATCGACATTTATGAAGAACAAGAAGAATATGAAACGATTGGGAGGGAAGGGTCTTTCACTCGAAGCGTTTGCGAATGCGAAATCAACAACCGATTACTATAATCCAGCTTTGATAAGTATGATTCTGCTGAAATTTTGTTAATTTTTACTTCTTTTTGTCTTAATGATCGTCTGATAGCCCTTTAGGTTTTTTTGCTGCTCACTCTTGACGGCTATGTGAAATCTAGGTTTTGGGTTTTTGTTTAAATGTCATGCGGCTAGAAGTGGTGTTGTAAATTCAGTATTTGGGTGGAGAATGAAAATTACAGGGAAAAATTTAAATTCATTGTAGTTCGATTGGGGGAATACATTGCAAAATCTAGTTTGATGGTTTGCTTTAGGAATTGGAAATTACCGACTGAATGTGGAAGTTGCTAAAATTGATATATATAATCAAATTGCTAAAATTGTGGAAGTTGGTAAGAGAATTAAGAAAATTGATATATATATGAATTGAATTTTAATTATGAAAGATAATTCACAAAATATTTTAGGGTTGAATTTGATTGTGAAAGGAATTCACACCAAGAATAGGATTTCGTCTGTGTCTTTCCTTTCTCTTCTCATTCACTGTAAAAAAGCCCTCTTTTGTTTCTCTGATCTCTGTTCACCGAATTCTCGCTGTCTCCCTTCTTGTTCGTGAACACTGTCTCTTTTCTTTCTTCTTCACCCAAATTTCAGTCTCCTTTGGATTTCTTCTTCCCTCTTTTCTTTCTCTCTCTTTTCTCATTCTACGACGTCGGCACAAGCTTAAGCTTTCCCTTTCCCTTTCCCTTTCCTTTCTTGTTCTTCAAACCCTCACAAAACTAAACTTCTGAAAACAAAGTCTCATCTCCAGTCGTCGGTTTCAGAGAGCCTTCGAAAACTACCAAACACGATTTTCGCCCATCCATGAACAGCCCTAGTGGGAGGAGTATTTATTTTGACTATCTGACCACACAACTCCTCCTCCTCCCATCTCCTTCCCTTTCCTTCTCTGTTTTGCCCTAATTGTTCTTAATCTCATACCATCTCTCACCAAATTCTCTATTCAACAATGAAGAAGCCAACTGGAAAAGACGAACAACAGAGTCGCCCCAAATCGACATTTATGAAGAACAAGAAACACAACAATATGAAACGATTGGGAGGGAAGAGTCTTTCACTCGAAGCATTTGCGAATGCGAAATCAACTACTGGTTACTATAATCCAGCCTTGATAAGTATGATTCTGCTAAAATTTTGTTAATTTTTATTTCTTTTTGTCTTACTGATTGTTTAATAGTCCTTTAGTTTTTTTGCTGCTCACTCGTTGATGATTATGTGAATTCTAGGATTTAGGTTCTTGTTTAAATGTTATGCGGCTTGAAGTGGTGTTGTAAATTCAAGAAAATTATAGAGAAAAATTTAAATTCATTGGTGTTCAATTGCAAAATCTAGTTTGATGGTTTGCTTTAGGGAATCAGAAATTACTGAGTGAAAATATGTGAATTTCTTATAGTTTATGAATTTAATAGTCTCTGTTTATGGTAGTGATTGAACTCTCTTATATGTATCTTTTGTTCAGAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAGCAAGTATAAGAAGTTGGTAAAGCATCAAAATCAGCGGGATGAGAGGCCCTCTAGCTCAACTGTTGGACTTGTCGAGGTATGACTCTTTGATAAGTATCTATTATTGCCTAAAACTTCAAATATGTTTGTTAACCTTCAATGCTTGGTGAGTTTTGGACTCTTGAGATGCCCTTTTTTGTGGAATGAGAAAATGGTACTGCAAAATATTGCATAAGATAATCTGTTGCAAGTTTTCCTATGGGGGGGAGATAGAGCTTTATTTTCTTTTTGGTTGTTGAAGTTATTTCGGGTCACAATTTTTTTATTTGTTTAGGCATTCAACCCAATGAGCATCTGTTTTGTTCCATTCTTGTTATAGAGAGAGAGAGAGAAGCTTTGTTTCTTGAAGTTATTTCAGTTGCCTCTTTCACTATTTGTTGATTGTGATTTTGGTAGACATTGATCCCAACGAGCATCTGTTTTGTTTGGTTCTTGTGATAACAAGAGAGAGGAGCATTGTTTCTTTTGTTTGTTGAAGTTCCTTTGTCACTTAAGGTGTTCAAAAAACCCAATCTACCCAACCCAACCCATATGGTTTTGAGTTGGTGGGTTCAGTGTTTTTTAAAGCTCATGGCGCACTAAAGTACAATAGCGTTTCTGAACTTAAGCACTCAAGGCACACTATAGGAAGATGTAATGAATTAATATGTTTCTTTCTAGAAAATTGAAAAATTAAAAAAAGAAAGTAAAAAGTCAGGCTTGAGGCACTGAGGCACACATCACACAAGTGCTGAAGAGCGTATCTCAAGCAAGCTTTGCAGAGGCCGTGCCTTGGGCTTAGACTTTTTAAAACACTGGTTGGGTTATAAATTTGTTTGAGTTGGGTTGAGTTGGGTCAACATAAATGAAAACCTATAGGATGGATTGGTTCATGGGTTTTCCACTTTACCTAAATTTACTTTAGTTGAATCAAATCTACCTAACATATTATTAAATGAAATGGTTTGAACATATTATATATCTATATTCTCCAATATTTTGAGGTGAACCAAGGTGAAGTGACTTTGAGTTACTAGTGTTGTTGAGGTGAACTAAGGCGCTCACTAACTGGCCTTACCACCTTGAAGATATCCATGGCAGGCACCTTGAACATAACGCCATGGTTCGCCATCGCCGAAAGGCAAGGTGAGTGGCTTATGGGAAGAGAAAATAAGTAGGGGAAGAAGAAAGCTGGTCTGAAGACAAGCATAAGAAAAGTCAAGATAAAGACTTTTCTAGAAGTATTAATGAAATTCCGACTGCCATCATTTATGAAAATGAAGCTAGTGCTTGCTGCATTTAATTTTTCTCCAATTTTTTTCTTCTTTAAATATCCTTAATTTTTTTAATTATTTAAGTTGATTTGTAGTTAAATATTAAATGATTTTGTTAATATTTTTGCATTTATACTTTAATTTTTTTTAATCTATTATTTATGAAGTGTGTCTGCTTCATTCAAGGGATTCATTATTTGATAATGGTTGTTTTGTTGAAAGAACTCCCAAAACCCGAACAATTGGGTTGGATCTAAAAGGTATCTCAACCCAATCTAATCCAACCTATAGATACCCGTCTGTCTCTATTTGTTGATTGTGATTTGGAGAGACATCGAACCCAACGAGCATCTGTTTCATTCCATTCATGTTATGAAAAGAATCTGCTGTGTATAGAATGTGCTGCTTGAACTATCAACTGACTCACTTTCTTGCTGGTTCTTAAAGGGTGAAAACGAAATGAAATTCGAGAATCAGACGAACAGAAGATGTGCGAAAGAAAGGAATAAAGGCGTACCTAGTCTCCAGGGACTGTATGAGAGAAAGCATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCAGCGAAAAAGGAAGAACAAGAAAAGGCTAAAGCTAGACGAAACTCCACTAGGGAAAAAATGTTCAAAAGGACACAAAAAGGTCAGCCTGTTATGAAGTACCGAATTGAGCATCTTTTGGAGACTATTGGAGCCTCAATGAACCACTGAGGCTTTGGCTGTTTTGACTGTAGTTTGTGAAAGAAAATTTTGTCTCTTTAGGATGTATATTTCTCTTGTACCTTTTTAGATTGCTTCATTATACAATCAAATTCTAGTGTATTACATTTTACAATGGATTCCAAATGATCCATATGCTTAACATTATCATATTGCCGTCCCTTGGGAAGGTCTTGGATTTAAGTCTCCAAGTCTTTAGTGGAATGTTCAATAAGAAAATATTCTCGTCTTTTAGAGTTTGTGTTCACACGTAAAGTCTTGTCGCAGC

mRNA sequence

GGAAGCTGTTTCACTTTCCCTCCCTGTTCTGTTTTTTGCCCTAATTCTAATTGTTCTTAATTTCATTGAATCTCTCAGCAAGTTCTCTATCCAACAATGAAGAAGGGAACTGGAAAAGACGAAGAAAAGAGTCGCCCCAAATCGACATTTATGAAGAACAAGAAGAATATGAAACGATTGGGAGGGAAGGGTCTTTCACTCGAAGCGTTTGCGAATGCGAAATCAACAACCGATTACTATAATCCAGCTTTGATAAGTATGATTCTGCTGAAATTTTGTTAATTTTTACTTCTTTTTGTCTTAATGATCGTCTGATAGCCCTTTAGGTTTTTTTGCTGCTCACTCTTGACGGCTATGTGAAATCTAGGTTTTGGGTTTTTGTTTAAATGTCATGCGGCTAGAAGTGGTGTTGTAAATTCAGTATTTGGGTGGAGAATGAAAATTACAGGGAAAAATTTAAATTCATTGTAGTTCGATTGGGGGAATACATTGCAAAATCTAGTTTGATGGTTTGCTTTAGGAATTGGAAATTACCGACTGAATGTGGAAGTTGCTAAAATTGATATATATAATCAAATTGCTAAAATTGTGGAAGTTGGTAAGAGAATTAAGAAAATTGATATATATATGAATTGAATTTTAATTATGAAAGATAATTCACAAAATATTTTAGGGTTGAATTTGATTGTGAAAGGAATTCACACCAAGAATAGGATTTCGTCTGTGTCTTTCCTTTCTCTTCTCATTCACTGTAAAAAAGCCCTCTTTTGTTTCTCTGATCTCTGTTCACCGAATTCTCGCTGTCTCCCTTCTTGTTCGTGAACACTGTCTCTTTTCTTTCTTCTTCACCCAAATTTCAGTCTCCTTTGGATTTCTTCTTCCCTCTTTTCTTTCTCTCTCTTTTCTCATTCTACGACGTCGGCACAAGCTTAAGCTTTCCCTTTCCCTTTCCCTTTCCTTTCTTGTTCTTCAAACCCTCACAAAACTAAACTTCTGAAAACAAAGTCTCATCTCCAGTCGTCGGTTTCAGAGAGCCTTCGAAAACTACCAAACACGATTTTCGCCCATCCATGAACAGCCCTAGTGGGAGGAGTATTTATTTTGACTATCTGACCACACAACTCCTCCTCCTCCCATCTCCTTCCCTTTCCTTCTCTGTTTTGCCCTAATTGTTCTTAATCTCATACCATCTCTCACCAAATTCTCTATTCAACAATGAAGAAGCCAACTGGAAAAGACGAACAACAGAGTCGCCCCAAATCGACATTTATGAAGAACAAGAAACACAACAATATGAAACGATTGGGAGGGAAGAGTCTTTCACTCGAAGCATTTGCGAATGCGAAATCAACTACTGGTTACTATAATCCAGCCTTGATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAGCAAGTATAAGAAGTTGGTAAAGCATCAAAATCAGCGGGATGAGAGGCCCTCTAGCTCAACTGTTGGACTTGTCGAGGGTGAAAACGAAATGAAATTCGAGAATCAGACGAACAGAAGATGTGCGAAAGAAAGGAATAAAGGCGTACCTAGTCTCCAGGGACTGTATGAGAGAAAGCATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCAGCGAAAAAGGAAGAACAAGAAAAGGCTAAAGCTAGACGAAACTCCACTAGGGAAAAAATGTTCAAAAGGACACAAAAAGGTCAGCCTGTTATGAAGTACCGAATTGAGCATCTTTTGGAGACTATTGGAGCCTCAATGAACCACTGAGGCTTTGGCTGTTTTGACTGTAGTTTGTGAAAGAAAATTTTGTCTCTTTAGGATGTATATTTCTCTTGTACCTTTTTAGATTGCTTCATTATACAATCAAATTCTAGTGTATTACATTTTACAATGGATTCCAAATGATCCATATGCTTAACATTATCATATTGCCGTCCCTTGGGAAGGTCTTGGATTTAAGTCTCCAAGTCTTTAGTGGAATGTTCAATAAGAAAATATTCTCGTCTTTTAGAGTTTGTGTTCACACGTAAAGTCTTGTCGCAGC

Coding sequence (CDS)

ATGAAGAAGCCAACTGGAAAAGACGAACAACAGAGTCGCCCCAAATCGACATTTATGAAGAACAAGAAACACAACAATATGAAACGATTGGGAGGGAAGAGTCTTTCACTCGAAGCATTTGCGAATGCGAAATCAACTACTGGTTACTATAATCCAGCCTTGATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTCAGCAAGTATAAGAAGTTGGTAAAGCATCAAAATCAGCGGGATGAGAGGCCCTCTAGCTCAACTGTTGGACTTGTCGAGGGTGAAAACGAAATGAAATTCGAGAATCAGACGAACAGAAGATGTGCGAAAGAAAGGAATAAAGGCGTACCTAGTCTCCAGGGACTGTATGAGAGAAAGCATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCAGCGAAAAAGGAAGAACAAGAAAAGGCTAAAGCTAGACGAAACTCCACTAGGGAAAAAATGTTCAAAAGGACACAAAAAGGTCAGCCTGTTATGAAGTACCGAATTGAGCATCTTTTGGAGACTATTGGAGCCTCAATGAACCACTGA

Protein sequence

MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCAKERNKGVPSLQGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASMNH

Homology

[Close]

BLAST of Lcy05g006540 vs. ExPASy TrEMBL
Match: A0A1S3BRH3 (uncharacterized protein LOC103492733 OS=Cucumis melo OX=3656 GN=LOC103492733 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.8e-81
Identity = 166/191 (86.91%), Postives = 176/191 (92.15%), Query Frame = 0


Query: 1   MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQRE 60
           MK P GK E ++R KS FM   KHNN+KRLGGK+LSLEAFANAKSTT YYNPALIKKQRE
Sbjct: 1   MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKALSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCAKERNKGVPSL 120
           FYKNAKHV+KYKKLVKHQNQ++ERPSSSTVGLVEGENE KFENQTN RC KERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETKFENQTNGRCGKERNKGVPSL 120

Query: 121 QGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH+EKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASMNH 192
           LLETIGAS NH
Sbjct: 181 LLETIGASTNH 191

[Close]

BLAST of Lcy05g006540 vs. ExPASy TrEMBL
Match: A0A0A0K7L3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G393990 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.8e-79
Identity = 165/191 (86.39%), Postives = 172/191 (90.05%), Query Frame = 0


Query: 1   MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQRE 60
           MK   GK E  +R KS FM N KHNN+KRLGGK LSLEAFANAKSTT YYNPALIKKQRE
Sbjct: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCAKERNKGVPSL 120
           FYKNAKHV+KYKKLVKHQNQ +ERPSSSTV LVEGENE KFENQTN RC KERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120

Query: 121 QGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH+EKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASMNH 192
           LLETIGAS NH
Sbjct: 181 LLETIGASTNH 191

[Close]

BLAST of Lcy05g006540 vs. ExPASy TrEMBL
Match: A0A6J1GP14 (uncharacterized protein LOC111455827 OS=Cucurbita moschata OX=3662 GN=LOC111455827 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.7e-79
Identity = 165/190 (86.84%), Postives = 173/190 (91.05%), Query Frame = 0


Query: 1   MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQRE 60
           MKK TG+DE Q+RPKS FMKNKKH NMKRLGGK LSLEAFAN KSTT YYNPALIKKQRE
Sbjct: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCAKERNKGVPSL 120
           FYKNAKHVSKYKKLVKHQN  +ERPSSSTVGLVEGEN  K ENQTN R  KERNKG+PSL
Sbjct: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120

Query: 121 QGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH+EKEKARMEKEAIIAAKKEEQE+AKARRN+TREKM KRTQKGQPVMKYRIEH
Sbjct: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASMN 191
           LL+TIGASMN
Sbjct: 181 LLKTIGASMN 190

[Close]

BLAST of Lcy05g006540 vs. ExPASy TrEMBL
Match: A0A6J1H9B9 (uncharacterized protein LOC111461241 OS=Cucurbita moschata OX=3662 GN=LOC111461241 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.4e-78
Identity = 164/191 (85.86%), Postives = 174/191 (91.10%), Query Frame = 0


Query: 1   MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQRE 60
           MK   GKDE+Q+R KS FMK  KH NMKRLGGK  S +AFANAKSTT YYNPALIKKQRE
Sbjct: 1   MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCAKERNKGVPSL 120
           FYKNAKHV+KYKKLVKHQN ++ERPSSS+VGLVEGENEMKFEN+TN R   ERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMKFENKTNGRRGNERNKGVPSL 120

Query: 121 QGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEH 180
           QGLYERKHQEKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASMNH 192
           LLETIGASMNH
Sbjct: 181 LLETIGASMNH 191

[Close]

BLAST of Lcy05g006540 vs. ExPASy TrEMBL
Match: A0A6J1KV89 (uncharacterized protein LOC111497895 OS=Cucurbita maxima OX=3661 GN=LOC111497895 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 8.9e-78
Identity = 162/191 (84.82%), Postives = 172/191 (90.05%), Query Frame = 0


Query: 1   MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQRE 60
           MK   GKDE+Q+R KS F K  KH NMKRLGGK  S +AFANAKSTT YYNPA IKKQRE
Sbjct: 1   MKNRAGKDEEQTRSKSKFTKGNKHKNMKRLGGKGPSPQAFANAKSTTDYYNPAFIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCAKERNKGVPSL 120
           FYKNAKHV+KYKKLVKHQN ++ERPS+STVGLVEGENEMKFEN+TN R   ERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNNQNERPSNSTVGLVEGENEMKFENRTNGRRGNERNKGVPSL 120

Query: 121 QGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEH 180
           QGLYERKHQEKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASMNH 192
           LLETIGASMNH
Sbjct: 181 LLETIGASMNH 191

[Close]

BLAST of Lcy05g006540 vs. NCBI nr
Match: XP_008451439.1 (PREDICTED: uncharacterized protein LOC103492733 [Cucumis melo])

HSP 1 Score: 310.8 bits (795), Expect = 7.9e-81
Identity = 166/191 (86.91%), Postives = 176/191 (92.15%), Query Frame = 0


Query: 1   MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQRE 60
           MK P GK E ++R KS FM   KHNN+KRLGGK+LSLEAFANAKSTT YYNPALIKKQRE
Sbjct: 1   MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKALSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCAKERNKGVPSL 120
           FYKNAKHV+KYKKLVKHQNQ++ERPSSSTVGLVEGENE KFENQTN RC KERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETKFENQTNGRCGKERNKGVPSL 120

Query: 121 QGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH+EKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASMNH 192
           LLETIGAS NH
Sbjct: 181 LLETIGASTNH 191

[Close]

BLAST of Lcy05g006540 vs. NCBI nr
Match: XP_004136058.2 (uncharacterized protein LOC101216293 [Cucumis sativus] >KGN44879.1 hypothetical protein Csa_016715 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 5.7e-79
Identity = 165/191 (86.39%), Postives = 172/191 (90.05%), Query Frame = 0


Query: 1   MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQRE 60
           MK   GK E  +R KS FM N KHNN+KRLGGK LSLEAFANAKSTT YYNPALIKKQRE
Sbjct: 1   MKHSNGKHEHNNRSKSKFMNNNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCAKERNKGVPSL 120
           FYKNAKHV+KYKKLVKHQNQ +ERPSSSTV LVEGENE KFENQTN RC KERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNQPNERPSSSTVTLVEGENETKFENQTNDRCGKERNKGVPSL 120

Query: 121 QGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH+EKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASMNH 192
           LLETIGAS NH
Sbjct: 181 LLETIGASTNH 191

[Close]

BLAST of Lcy05g006540 vs. NCBI nr
Match: XP_022953215.1 (uncharacterized protein LOC111455827 [Cucurbita moschata] >KAG6575862.1 hypothetical protein SDJN03_26501, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 303.9 bits (777), Expect = 9.7e-79
Identity = 165/190 (86.84%), Postives = 173/190 (91.05%), Query Frame = 0


Query: 1   MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQRE 60
           MKK TG+DE Q+RPKS FMKNKKH NMKRLGGK LSLEAFAN KSTT YYNPALIKKQRE
Sbjct: 1   MKKRTGEDEVQNRPKSAFMKNKKHKNMKRLGGKGLSLEAFANVKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCAKERNKGVPSL 120
           FYKNAKHVSKYKKLVKHQN  +ERPSSSTVGLVEGEN  K ENQTN R  KERNKG+PSL
Sbjct: 61  FYKNAKHVSKYKKLVKHQNHHNERPSSSTVGLVEGENGTKLENQTNGRRGKERNKGIPSL 120

Query: 121 QGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH+EKEKARMEKEAIIAAKKEEQE+AKARRN+TREKM KRTQKGQPVMKYRIEH
Sbjct: 121 QELYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNTTREKMLKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASMN 191
           LL+TIGASMN
Sbjct: 181 LLKTIGASMN 190

[Close]

BLAST of Lcy05g006540 vs. NCBI nr
Match: XP_038876713.1 (uncharacterized protein LOC120069103 [Benincasa hispida])

HSP 1 Score: 303.5 bits (776), Expect = 1.3e-78
Identity = 167/192 (86.98%), Postives = 175/192 (91.15%), Query Frame = 0


Query: 1   MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQRE 60
           MK PTGKDE Q+R  S FMK+KKH NMKRLGGK LSLEAFANAKSTT YYNPALIKKQRE
Sbjct: 1   MKNPTGKDEDQNRSNSKFMKSKKHKNMKRLGGKGLSLEAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCAKERNKGVPSL 120
           FYKNAKHVSKYKKLVK+QNQ++ERPSSSTVGLVE ENE KFEN TN R  KERNKGVPSL
Sbjct: 61  FYKNAKHVSKYKKLVKYQNQQNERPSSSTVGLVEDENETKFENHTNGRRGKERNKGVPSL 120

Query: 121 QGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEH 180
           Q LYERKH+EKEKARMEKEAIIAAKKEEQE+AKARRN+TREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QALYERKHEEKEKARMEKEAIIAAKKEEQERAKARRNATREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETI-GASMNH 192
           LLETI GASM H
Sbjct: 181 LLETIGGASMKH 192

[Close]

BLAST of Lcy05g006540 vs. NCBI nr
Match: XP_022960530.1 (uncharacterized protein LOC111461241 [Cucurbita moschata])

HSP 1 Score: 302.4 bits (773), Expect = 2.8e-78
Identity = 164/191 (85.86%), Postives = 174/191 (91.10%), Query Frame = 0


Query: 1   MKKPTGKDEQQSRPKSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQRE 60
           MK   GKDE+Q+R KS FMK  KH NMKRLGGK  S +AFANAKSTT YYNPALIKKQRE
Sbjct: 1   MKNRAGKDEEQTRSKSKFMKANKHKNMKRLGGKGPSPQAFANAKSTTDYYNPALIKKQRE 60

Query: 61  FYKNAKHVSKYKKLVKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCAKERNKGVPSL 120
           FYKNAKHV+KYKKLVKHQN ++ERPSSS+VGLVEGENEMKFEN+TN R   ERNKGVPSL
Sbjct: 61  FYKNAKHVNKYKKLVKHQNNQNERPSSSSVGLVEGENEMKFENKTNGRRGNERNKGVPSL 120

Query: 121 QGLYERKHQEKEKARMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEH 180
           QGLYERKHQEKEKARMEKEAIIAAKKEE+E+AKARRNSTREKMFKRTQKGQPVMKYRIEH
Sbjct: 121 QGLYERKHQEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEH 180

Query: 181 LLETIGASMNH 192
           LLETIGASMNH
Sbjct: 181 LLETIGASMNH 191

[Close]

BLAST of Lcy05g006540 vs. TAIR 10
Match: AT4G03180.1 (CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink). )

HSP 1 Score: 135.6 bits (340), Expect = 4.3e-32
Identity = 80/174 (45.98%), Postives = 117/174 (67.24%), Query Frame = 0


Query: 15  KSTFMKNKKHNNMKRLGGKSLSLEAFANAKSTTGYYNPALIKKQREFYKNAKHVSKYKKL 74
           KS   + KK  NM+RLGG  LSL+ FAN KS    YNP+LIKKQ+EFYKNAK+VSK++K 
Sbjct: 14  KSKSAETKKRKNMRRLGGGGLSLQTFANMKSENNRYNPSLIKKQKEFYKNAKYVSKFRKS 73

Query: 75  VKHQNQRDERPSSSTVGLVEGENEMKFENQTNRRCAKERNKGVPSLQGLYERKHQEKEKA 134
           +K QN  D+  +  T  + + +++ K + ++N+R           ++ LY++  +E E+ 
Sbjct: 74  LKQQNIPDKNETGETSKVGDDDDDDKRKGKSNKRI---------GVEDLYKQTREEMERV 133

Query: 135 RMEKEAIIAAKKEEQEKAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS 189
           R E+EA+  AKKE +E+A++RR   + KM ++T+ GQPVMKYRIEHLLE+I  S
Sbjct: 134 RKEREAMFQAKKEAKEEAESRRKEAKGKMLRKTRHGQPVMKYRIEHLLESIKKS 178

The following BLAST results are available for this feature:

BLAST of Lcy05g006540 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g006540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BRH3	3.8e-81	86.91	uncharacterized protein LOC103492733 OS=Cucumis melo OX=3656 GN=LOC103492733 PE=...	[more]
A0A0A0K7L3	2.8e-79	86.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G393990 PE=4 SV=1	[more]
A0A6J1GP14	4.7e-79	86.84	uncharacterized protein LOC111455827 OS=Cucurbita moschata OX=3662 GN=LOC1114558...	[more]
A0A6J1H9B9	1.4e-78	85.86	uncharacterized protein LOC111461241 OS=Cucurbita moschata OX=3662 GN=LOC1114612...	[more]
A0A6J1KV89	8.9e-78	84.82	uncharacterized protein LOC111497895 OS=Cucurbita maxima OX=3661 GN=LOC111497895...	[more]

BLAST of Lcy05g006540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451439.1	7.9e-81	86.91	PREDICTED: uncharacterized protein LOC103492733 [Cucumis melo]	[more]
XP_004136058.2	5.7e-79	86.39	uncharacterized protein LOC101216293 [Cucumis sativus] >KGN44879.1 hypothetical ...	[more]
XP_022953215.1	9.7e-79	86.84	uncharacterized protein LOC111455827 [Cucurbita moschata] >KAG6575862.1 hypothet...	[more]
XP_038876713.1	1.3e-78	86.98	uncharacterized protein LOC120069103 [Benincasa hispida]	[more]
XP_022960530.1	2.8e-78	85.86	uncharacterized protein LOC111461241 [Cucurbita moschata]	[more]

BLAST of Lcy05g006540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03180.1	4.3e-32	45.98	CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 131..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..104
IPR013730	Fyv7/TAP26	PFAM	PF08524	rRNA_processing	coord: 55..185 e-value: 1.1E-11 score: 45.0
IPR013730	Fyv7/TAP26	PANTHER	PTHR15657	UNCHARACTERIZED	coord: 1..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g006540.1	Lcy05g006540.1	mRNA