Lcy05g006090 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g006090
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	rapid alkalinization factor-like
Location	Chr05: 5666511 .. 5668166 (-)
RNA-Seq Expression	Lcy05g006090
Synteny	Lcy05g006090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCAAGCAACTTGCTTGTATTTCAATATAAAGTATTAAAGAAGTGGGTTGTCAAGACATACCAAGAGGAGAGCAGAGAAAGCAACAATGGCGGCCAAGGTTTCTTTTCTCCTTCCATTCTGCTTCATCACTGCAATCCTTACCGTCTCCTCCACTGCAGTATTGGCCACCAGCACCGAGAGTCCGAGCTGGGTCTTGGATGGAGCTCGAGCTCGCTGTCACGGCTCCATGGCAAAGTGCATGATGGACGACATTGAATTCGAGATGGACTCAGAAATCAATAGGCGCATATTGGCAGATCTAAAGTACATAAGCTATGACGCACTCAAGGCCAACAAGGTGCCATGCTCACGCAGAGGAGCATCTTACTACAATTGCCAGCCAGGTGCCGAGGCGAACCCCTACAACCGAGGCTGCAGTGCTATTGCTCGTTGCCGAAGCTAAAGACTTGTATTTACTTTTGCCAAAGATAAAGCAGTAGATATATGAAGTCATCATAGAGTATAATCAATCACTATATTATCAATAAGAAATTATGCAGAAATAGCAAGTCCAAGTCTAGAACATATTGCAATCTTCTGTCTCATCCTAAGCTTTAGCTTCAATTTCACAAAGGTAATAGCAAAATGAGAATACTGCAAGTGATCAAACTCATCAATAGAACATACACACTCAACTATTTCTAGGCAGAACCTTCATCTTTCTTTGCTTCATCTGCATTTGACTTGGAAGGAGCCAATGGCGACGGTGAGCCCTCAACACCCATCTCAGCTTTTAGGTCATTGATGCTTTGCTCCAATTCATTTATGCGGCTTCCCATCTCATCGAGTATTTTCAAGTTAAAGAAAGCATATTTACTAATTACTATCAAATGCTACAATAAAACTATCCTATAGTCTACTTTTCCTATGAATTTGAAGCCCCAAAGTTGAATTAGAAAGTCAAAATTCTACCTACAATCAAGGTGGCTTACACAGAGGTTCTCAGATTGTACTGGATTCAAAGATTGTACTGGATTCAAACATCCCATTAGAAGAAATTAAGGTTCATACAAATTCAATCCATTTCAAAATCATTACTATCATTTCCATTAAGAATGTTTCAACTATATATAACTTCTACTAGATCATTGTTTACTAGAATGAAAGAAAATGCTCTAATACTCAGGAAATTGCACCATCTAGCCTATTTTACCACAAATATAATTATAGGATTTATTTTGCATAACTCAAAACTCATGCCTATTAAAAACAATTACCATCATATTTACAACTTAAGAGAAATTGCTAACAATAAACAAAATTATTTTGAAAGGATATTCTTTGTGATAATGGAGTCAGACATGGTTTGGAACCTAGATTGCTGCATAAAAAAGATTTTGTTAGATATAAATTTCTCTGCCGGAAACTTACACTTAATGAAACTCACCATCTGTTGAAGAAGATTTTGCACCTGAAAAAAGAAAAGGAAAAAAAAAAGTTAATACCAATTTAACTTACCCACCAAGAAACAATCAAGAGTACCTTAGGGATCAAATGTTAGCCAGAAAGAGAGTACCCATCAACAGAAAAATCAAAACTTCATAAAACCAGCCTATCAAAAAAGTCAGGCTTGACTCTCAAATTGGGAAAAACAAAGAGAATAAACAGAAAGAA

mRNA sequence

ATTCCAAGCAACTTGCTTGTATTTCAATATAAAGTATTAAAGAAGTGGGTTGTCAAGACATACCAAGAGGAGAGCAGAGAAAGCAACAATGGCGGCCAAGGTTTCTTTTCTCCTTCCATTCTGCTTCATCACTGCAATCCTTACCGTCTCCTCCACTGCAGTATTGGCCACCAGCACCGAGAGTCCGAGCTGGGTCTTGGATGGAGCTCGAGCTCGCTGTCACGGCTCCATGGCAAAGTGCATGATGGACGACATTGAATTCGAGATGGACTCAGAAATCAATAGGCGCATATTGGCAGATCTAAAGTACATAAGCTATGACGCACTCAAGGCCAACAAGGTGCCATGCTCACGCAGAGGAGCATCTTACTACAATTGCCAGCCAGGTGCCGAGGCGAACCCCTACAACCGAGGCTGCAGTGCTATTGCTCGTTGCCGAAGCTAAAGACTTGTATTTACTTTTGCCAAAGATAAAGCAGTAGATATATGAAGTCATCATAGAGTATAATCAATCACTATATTATCAATAAGAAATTATGCAGAAATAGCAAGTCCAAGTCTAGAACATATTGCAATCTTCTGTCTCATCCTAAGCTTTAGCTTCAATTTCACAAAGGTAATAGCAAAATGAGAATACTGCAAGTGATCAAACTCATCAATAGAACATACACACTCAACTATTTCTAGGCAGAACCTTCATCTTTCTTTGCTTCATCTGCATTTGACTTGGAAGGAGCCAATGGCGACGGTGAGCCCTCAACACCCATCTCAGCTTTTAGGTCATTGATGCTTTGCTCCAATTCATTTATGCGGCTTCCCATCTCATCGAGTATTTTCAAGTTAAAGAAAGCATATTTACTAATTACTATCAAATGCTACAATAAAACTATCCTATAGTCTACTTTTCCTATGAATTTGAAGCCCCAAAGTTGAATTAGAAAGTCAAAATTCTACCTACAATCAAGGTGGCTTACACAGAGGTTCTCAGATTGTACTGGATTCAAAGATTGTACTGGATTCAAACATCCCATTAGAAGAAATTAAGGTTCATACAAATTCAATCCATTTCAAAATCATTACTATCATTTCCATTAAGAATGTTTCAACTATATATAACTTCTACTAGATCATTGTTTACTAGAATGAAAGAAAATGCTCTAATACTCAGGAAATTGCACCATCTAGCCTATTTTACCACAAATATAATTATAGGATTTATTTTGCATAACTCAAAACTCATGCCTATTAAAAACAATTACCATCATATTTACAACTTAAGAGAAATTGCTAACAATAAACAAAATTATTTTGAAAGGATATTCTTTGTGATAATGGAGTCAGACATGGTTTGGAACCTAGATTGCTGCATAAAAAAGATTTTGTTAGATATAAATTTCTCTGCCGGAAACTTACACTTAATGAAACTCACCATCTGTTGAAGAAGATTTTGCACCTGAAAAAAGAAAAGGAAAAAAAAAAGTTAATACCAATTTAACTTACCCACCAAGAAACAATCAAGAGTACCTTAGGGATCAAATGTTAGCCAGAAAGAGAGTACCCATCAACAGAAAAATCAAAACTTCATAAAACCAGCCTATCAAAAAAGTCAGGCTTGACTCTCAAATTGGGAAAAACAAAGAGAATAAACAGAAAGAA

Coding sequence (CDS)

ATGGCGGCCAAGGTTTCTTTTCTCCTTCCATTCTGCTTCATCACTGCAATCCTTACCGTCTCCTCCACTGCAGTATTGGCCACCAGCACCGAGAGTCCGAGCTGGGTCTTGGATGGAGCTCGAGCTCGCTGTCACGGCTCCATGGCAAAGTGCATGATGGACGACATTGAATTCGAGATGGACTCAGAAATCAATAGGCGCATATTGGCAGATCTAAAGTACATAAGCTATGACGCACTCAAGGCCAACAAGGTGCCATGCTCACGCAGAGGAGCATCTTACTACAATTGCCAGCCAGGTGCCGAGGCGAACCCCTACAACCGAGGCTGCAGTGCTATTGCTCGTTGCCGAAGCTAA

Protein sequence

MAAKVSFLLPFCFITAILTVSSTAVLATSTESPSWVLDGARARCHGSMAKCMMDDIEFEMDSEINRRILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCRS

Homology

[Close]

BLAST of Lcy05g006090 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.2e-27
Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 10  PFCFITAILTVSSTAVLATSTESPSWVLDGARARCHGSMAKCMMD--DIEFEMDSEINRR 69
           P   I AILTV       TS  S  +V     ++C+G++A+C +   + EFEMDSEINRR
Sbjct: 8   PVAIIIAILTVHFLFAAVTSQSSGDFV--PIESKCNGTIAECSLSTAEEEFEMDSEINRR 67

Query: 70  ILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCR 118
           ILA  KYISY AL+ N VPCSRRGASYYNC+ GA+ANPY+RGCSAI RCR
Sbjct: 68  ILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Lcy05g006090 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.1e-26
Identity = 61/111 (54.95%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 9   LPFCFITAILTVSSTAVLATSTESPSWVLDG-ARARCHGSMAKCMMDDIEFEMDSEINRR 68
           L  C +     +S  A  A  + +  WV+   +   C GS+ +C+ ++ EFE+DSE NRR
Sbjct: 7   LILCVLIGAFFISMAA--AGDSGAYDWVMPARSGGGCKGSIGECIAEEEEFELDSESNRR 66

Query: 69  ILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCRS 119
           ILA  KYISY AL+ N VPCSRRGASYYNC+PGA+ANPY+RGCSAI RCRS
Sbjct: 67  ILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of Lcy05g006090 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-25
Identity = 64/109 (58.72%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 14  ITAILTVSSTAV---LATSTESPSWVLDGAR-ARCHGSMAKCMMDDIEFEMDSEINRRIL 73
           I  +  +SS  V    A      +W   G   + CHGS+A+C+  + E EMDSEINRRIL
Sbjct: 13  ILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAE-EEEMDSEINRRIL 72

Query: 74  ADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCRS 119
           A  KYISY +LK N VPCSRRGASYYNCQ GA+ANPY+RGCS IARCRS
Sbjct: 73  ATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Lcy05g006090 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.4e-24
Identity = 61/111 (54.95%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 14  ITAILTVSSTAVLATSTESPSWVLDGARA-------RCHGSMAKCMMDDIEFEMDSEINR 73
           + AIL +  +AV +T     S  LD  RA        C GS+A+C+ ++ E E DS+I+R
Sbjct: 10  VIAILAIVISAVESTGDFGDS--LDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDISR 69

Query: 74  RILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCR 118
           RILA  KYISY A++ N VPCSRRGASYYNCQ GA+ANPY+RGCS I RCR
Sbjct: 70  RILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of Lcy05g006090 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.4e-22
Identity = 62/122 (50.82%), Postives = 78/122 (63.93%), Query Frame = 0


Query: 14  ITAILTVSSTAVLATSTESPSWVLD--GARARCHGSMAKCMMD-------DI-------- 73
           I  IL V + +V A S++S  +  D       C G++A+C +        D+        
Sbjct: 16  ILLILAVHNWSV-AVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGEMG 75

Query: 74  -EFEMDSEINRRILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIAR 118
            EFEMDSEINRRILA  +YISY AL+ N +PCSRRGASYYNC+ GA+ANPY+RGCSAI R
Sbjct: 76  EEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAITR 135

[Close]

BLAST of Lcy05g006090 vs. ExPASy TrEMBL
Match: A0A6J1DJJ4 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111021064 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.4e-51
Identity = 104/118 (88.14%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MAAKVSFLLPFCFITAILTVSSTAVLATSTESPSWVLDGARARCHGSMAKCMMDDIEFEM 60
           MAAKVSFLLPFC ITAILTVSSTAV A STESPSWVLDGARARCHGSMA+CMMD+IE+EM
Sbjct: 1   MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 60

Query: 61  DSEINRRILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCRS 119
           +SEINRRILA   YISY+ALKAN VPCSRRGASYYNCQPGAEANPY+RGCSAI RCRS
Sbjct: 61  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 118

[Close]

BLAST of Lcy05g006090 vs. ExPASy TrEMBL
Match: A0A6J1GNW5 (rapid alkalinization factor-like OS=Cucurbita moschata OX=3662 GN=LOC111455786 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.1e-49
Identity = 101/118 (85.59%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MAAKVSFLLPFCFITAILTVSSTAVLATSTESPSWVLDGARARCHGSMAKCMMDDIEFEM 60
           MAAK+SFLLPFCFI A LTV STAV AT+T+ PSWVLD A A CHGSMA CMMDDIEF+M
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTAVSATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 61  DSEINRRILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCRS 119
           DSEINRRILAD+ YISYDAL+ANKVPCSRRGASYYNCQPGAEANPY+RGCSAIARCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of Lcy05g006090 vs. ExPASy TrEMBL
Match: A0A0A0K607 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396340 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.0e-44
Identity = 93/118 (78.81%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 1   MAAKVSFLLPFCFITAILTVSSTAVLATSTESPSWVLDGARARCHGSMAKCMMDDIEFEM 60
           MA  VSFLLP   + AILTVSSTA      ++PSWVLDGA ARCHGSMA+CMM+DIEF+M
Sbjct: 1   MATTVSFLLPIFLLVAILTVSSTA------KTPSWVLDGAHARCHGSMAECMMEDIEFQM 60

Query: 61  DSEINRRILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCRS 119
           DSEINRRILADL YISYDALKAN VPCSR+GASYYNCQPGAEANPY+RGC+AI+RCRS
Sbjct: 61  DSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of Lcy05g006090 vs. ExPASy TrEMBL
Match: A0A5A7VLB3 (Rapid alkalinization factor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00450 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.2e-43
Identity = 93/118 (78.81%), Postives = 102/118 (86.44%), Query Frame = 0


Query: 1   MAAKVSFLLPFCFITAILTVSSTAVLATSTESPSWVLDGARARCHGSMAKCMMDDIEFEM 60
           MAAKVSFLLP   + AILTVSSTA       +PSWVL GA ARCHGSMA+CM +DIEFEM
Sbjct: 1   MAAKVSFLLPIFLLVAILTVSSTAT------TPSWVLGGAHARCHGSMAECMKEDIEFEM 60

Query: 61  DSEINRRILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCRS 119
           DSEINRRILADL YISYDAL+AN VPCSR+GASYYNCQPGAEANPY+RGC+AI+RCRS
Sbjct: 61  DSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of Lcy05g006090 vs. ExPASy TrEMBL
Match: A0A1S3BRF1 (rapid alkalinization factor-like OS=Cucumis melo OX=3656 GN=LOC103492893 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.2e-43
Identity = 93/118 (78.81%), Postives = 102/118 (86.44%), Query Frame = 0


Query: 1   MAAKVSFLLPFCFITAILTVSSTAVLATSTESPSWVLDGARARCHGSMAKCMMDDIEFEM 60
           MAAKVSFLLP   + AILTVSSTA       +PSWVL GA ARCHGSMA+CM +DIEFEM
Sbjct: 1   MAAKVSFLLPIFLLVAILTVSSTAT------TPSWVLGGAHARCHGSMAECMKEDIEFEM 60

Query: 61  DSEINRRILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCRS 119
           DSEINRRILADL YISYDAL+AN VPCSR+GASYYNCQPGAEANPY+RGC+AI+RCRS
Sbjct: 61  DSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of Lcy05g006090 vs. NCBI nr
Match: XP_022153599.1 (protein RALF-like 33 [Momordica charantia])

HSP 1 Score: 210.3 bits (534), Expect = 9.0e-51
Identity = 104/118 (88.14%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MAAKVSFLLPFCFITAILTVSSTAVLATSTESPSWVLDGARARCHGSMAKCMMDDIEFEM 60
           MAAKVSFLLPFC ITAILTVSSTAV A STESPSWVLDGARARCHGSMA+CMMD+IE+EM
Sbjct: 1   MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 60

Query: 61  DSEINRRILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCRS 119
           +SEINRRILA   YISY+ALKAN VPCSRRGASYYNCQPGAEANPY+RGCSAI RCRS
Sbjct: 61  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 118

[Close]

BLAST of Lcy05g006090 vs. NCBI nr
Match: XP_038896330.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 208.0 bits (528), Expect = 4.5e-50
Identity = 102/118 (86.44%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 1   MAAKVSFLLPFCFITAILTVSSTAVLATSTESPSWVLDGARARCHGSMAKCMMDDIEFEM 60
           MAAKVSFLLPF  + AILTVSSTAVL TST++PSWVLDGARARCHGSMA+CMM DIEFEM
Sbjct: 1   MAAKVSFLLPFFLVAAILTVSSTAVLTTSTKTPSWVLDGARARCHGSMAECMMGDIEFEM 60

Query: 61  DSEINRRILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCRS 119
           +S+INRRILADL YISYDALKAN VPCSRRGASYYNCQPGAEANPY+RGC+AI+RCRS
Sbjct: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYDRGCNAISRCRS 118

[Close]

BLAST of Lcy05g006090 vs. NCBI nr
Match: KAG7014377.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206.5 bits (524), Expect = 1.3e-49
Identity = 101/118 (85.59%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MAAKVSFLLPFCFITAILTVSSTAVLATSTESPSWVLDGARARCHGSMAKCMMDDIEFEM 60
           MAAK+SFLLPFCFI A LTV ST VLAT+T+ PSWVLD A A CHGSMA CMMDDIEF+M
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 61  DSEINRRILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCRS 119
           DSEINRRILAD+ YISYDAL+ANKVPCSRRGASYYNCQPGAEANPY+RGCSAIARCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of Lcy05g006090 vs. NCBI nr
Match: XP_022953165.1 (rapid alkalinization factor-like [Cucurbita moschata])

HSP 1 Score: 205.7 bits (522), Expect = 2.2e-49
Identity = 101/118 (85.59%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 1   MAAKVSFLLPFCFITAILTVSSTAVLATSTESPSWVLDGARARCHGSMAKCMMDDIEFEM 60
           MAAK+SFLLPFCFI A LTV STAV AT+T+ PSWVLD A A CHGSMA CMMDDIEF+M
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTAVSATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 61  DSEINRRILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCRS 119
           DSEINRRILAD+ YISYDAL+ANKVPCSRRGASYYNCQPGAEANPY+RGCSAIARCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of Lcy05g006090 vs. NCBI nr
Match: XP_011659776.1 (rapid alkalinization factor [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 6.3e-44
Identity = 93/118 (78.81%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 1   MAAKVSFLLPFCFITAILTVSSTAVLATSTESPSWVLDGARARCHGSMAKCMMDDIEFEM 60
           MA  VSFLLP   + AILTVSSTA      ++PSWVLDGA ARCHGSMA+CMM+DIEF+M
Sbjct: 1   MATTVSFLLPIFLLVAILTVSSTA------KTPSWVLDGAHARCHGSMAECMMEDIEFQM 60

Query: 61  DSEINRRILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCRS 119
           DSEINRRILADL YISYDALKAN VPCSR+GASYYNCQPGAEANPY+RGC+AI+RCRS
Sbjct: 61  DSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of Lcy05g006090 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 121.3 bits (303), Expect = 5.1e-28
Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 10  PFCFITAILTVSSTAVLATSTESPSWVLDGARARCHGSMAKCMMD--DIEFEMDSEINRR 69
           P   I AILTV       TS  S  +V     ++C+G++A+C +   + EFEMDSEINRR
Sbjct: 8   PVAIIIAILTVHFLFAAVTSQSSGDFV--PIESKCNGTIAECSLSTAEEEFEMDSEINRR 67

Query: 70  ILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCR 118
           ILA  KYISY AL+ N VPCSRRGASYYNC+ GA+ANPY+RGCSAI RCR
Sbjct: 68  ILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Lcy05g006090 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 117.1 bits (292), Expect = 9.7e-27
Identity = 64/109 (58.72%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 14  ITAILTVSSTAV---LATSTESPSWVLDGAR-ARCHGSMAKCMMDDIEFEMDSEINRRIL 73
           I  +  +SS  V    A      +W   G   + CHGS+A+C+  + E EMDSEINRRIL
Sbjct: 13  ILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAE-EEEMDSEINRRIL 72

Query: 74  ADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCRS 119
           A  KYISY +LK N VPCSRRGASYYNCQ GA+ANPY+RGCS IARCRS
Sbjct: 73  ATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Lcy05g006090 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 112.5 bits (280), Expect = 2.4e-25
Identity = 61/111 (54.95%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 14  ITAILTVSSTAVLATSTESPSWVLDGARA-------RCHGSMAKCMMDDIEFEMDSEINR 73
           + AIL +  +AV +T     S  LD  RA        C GS+A+C+ ++ E E DS+I+R
Sbjct: 10  VIAILAIVISAVESTGDFGDS--LDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDISR 69

Query: 74  RILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIARCR 118
           RILA  KYISY A++ N VPCSRRGASYYNCQ GA+ANPY+RGCS I RCR
Sbjct: 70  RILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of Lcy05g006090 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 105.1 bits (261), Expect = 3.8e-23
Identity = 62/122 (50.82%), Postives = 78/122 (63.93%), Query Frame = 0


Query: 14  ITAILTVSSTAVLATSTESPSWVLD--GARARCHGSMAKCMMD-------DI-------- 73
           I  IL V + +V A S++S  +  D       C G++A+C +        D+        
Sbjct: 16  ILLILAVHNWSV-AVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGEMG 75

Query: 74  -EFEMDSEINRRILADLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSAIAR 118
            EFEMDSEINRRILA  +YISY AL+ N +PCSRRGASYYNC+ GA+ANPY+RGCSAI R
Sbjct: 76  EEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAITR 135

[Close]

BLAST of Lcy05g006090 vs. TAIR 10
Match: AT1G28270.1 (ralf-like 4 )

HSP 1 Score: 81.3 bits (199), Expect = 5.9e-16
Identity = 40/64 (62.50%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 54  DDIEFEMDSEINRRILA-DLKYISYDALKANKVPCSRRGASYYNCQPGAEANPYNRGCSA 113
           D++E  MDSE NRR LA   +YI YDALK N VPCSRRG SYY+C+     NPY RGCSA
Sbjct: 42  DELESLMDSETNRRQLARGRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSA 101

Query: 114 IARC 117
           I  C
Sbjct: 102 ITHC 105

The following BLAST results are available for this feature:

BLAST of Lcy05g006090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9P8	7.2e-27	59.09	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q945T0	6.1e-26	54.95	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9SRY3	1.4e-25	58.72	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q9MA62	3.4e-24	54.95	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]
Q9LUS7	5.4e-22	50.82	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]

BLAST of Lcy05g006090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJJ4	4.4e-51	88.14	protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111021064 PE=3 SV=1	[more]
A0A6J1GNW5	1.1e-49	85.59	rapid alkalinization factor-like OS=Cucurbita moschata OX=3662 GN=LOC111455786 P...	[more]
A0A0A0K607	3.0e-44	78.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396340 PE=3 SV=1	[more]
A0A5A7VLB3	1.2e-43	78.81	Rapid alkalinization factor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BRF1	1.2e-43	78.81	rapid alkalinization factor-like OS=Cucumis melo OX=3656 GN=LOC103492893 PE=3 SV...	[more]

BLAST of Lcy05g006090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153599.1	9.0e-51	88.14	protein RALF-like 33 [Momordica charantia]	[more]
XP_038896330.1	4.5e-50	86.44	protein RALF-like 33 [Benincasa hispida]	[more]
KAG7014377.1	1.3e-49	85.59	Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022953165.1	2.2e-49	85.59	rapid alkalinization factor-like [Cucurbita moschata]	[more]
XP_011659776.1	6.3e-44	78.81	rapid alkalinization factor [Cucumis sativus]	[more]

BLAST of Lcy05g006090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15800.1	5.1e-28	59.09	ralf-like 33	[more]
AT1G02900.1	9.7e-27	58.72	rapid alkalinization factor 1	[more]
AT3G05490.1	2.4e-25	54.95	ralf-like 22	[more]
AT3G16570.1	3.8e-23	50.82	rapid alkalinization factor 23	[more]
AT1G28270.1	5.9e-16	62.50	ralf-like 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 57..117 e-value: 2.5E-29 score: 102.0
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 7..118
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 7..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g006090.1	Lcy05g006090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane