Lcy05g004540 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g004540
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr05: 4094626 .. 4099332 (+)
RNA-Seq ExpressionLcy05g004540
SyntenyLcy05g004540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCATCAGTCCAGTATATTCCTTCGAATGGAGCCTCGCCTTCACGATGCCCCAATCTTCCGCTGGTCGTCAATTCCCCTAACCTCCACAGTCGCTTCAATGGTTTCCATAAGCTCCACTTCTTCCTTCATCACTTCTTCCTACTCACGGTCACTTAAGCGGAGTTCCAGCCAGTCCTCCGACGGCCTACAGAGAGATCCGAAGAAGGGTCTGTCTCGGATTCTGAGGAAAGACGCTGCCATTAGAGCTATAGAGAGGAAAGCCAACTCCAAGAAGTACAATAACCTTTGGCCCAAAGCTGTTTTGGAGGCTCTCGACGAGGCTATTCAGGAGAATCTCTGGGAAACCGCTCTTAAGGTTAGTTGATCTTCTTGAATCTTTTTTCTTTTGTTCTTCTTCTTCGTTTTCAGTGTTTTCCCCAAGATTATTGAATATTGGAACATCAAGTGGTTGTGAAATGATTGGAGCTTATTACTATCATGCTATGTGGTTAAGAATAGTCTTTGTCTTTGTTAAATTTGCAAGCGATAAGTGTTAAATCACAACTAAACCCGAAAGTTAAAACTTAAGTTGATGGGCTATGTTAAAGTTGACATTCCTCCACACCCTCCACTCGTGGTTTTAAGAATTTGCACAAGGTCCAAAAAATGGTTATGGAATGGATAATAATTGGGGAGAAAATCAAACTACGAGTTCGAACATAGGATATCAACCTCTTGCTTTGATACTATATAAAATCAAACCAGAAGTTTAAAGTTTAATGGGTTAGTGTAAATTTAATCTTTTATCAATACGTATATCCCGAACATGAATGTCCTATAAATTCTATATTAATTGCGGCTAGAATGAACAATTCTCACTCTATCATTGAGGAGTGAGCCAACTCCAACTCATGTCAAAAAGGTTTCTTCTTTGATGAAATTTCCAACTTTTCTCAGTACCCTTCCAGCAACCTTTAGCACTGGAAGTTATGTAAATATTAGGAAATGAAAGACTGAATGGAGAAGAAGCATCCTCCAAAATTCTAAGGCTTCTCCATTTCTCAACTCAGAGGCAATGCCTTTCTCCAGCAAAGCTCTAGTTTAAGCAATTTCAACCCATCGGCTAAAGCTTCTTCTACCTGAAATTTCTCTCATGAGCAAATCAAGGTTGTTATCGATCTCTTATCTATTTGAGATGATATGTCCAACATAGAGTGTTCTTCTCAGGAAAGAACCTCTAGAACTGTTTTGAGATTGAGAAGAGAGGGGTATTTCTGTTTCTGATGTTTGCTTTATTTCTGTTGTTCAGAACCCTTATTACTTCAGCAAAGCATCCTGTCTTGTTAGTGATCTTTTTAACCCACATAAGACAATTCTCACAGAAGGACTTTCTGAAGAACTTCTTATTCAAGAGGGTTAACACAAGATCTTTCAAGGTATCAGCTAACCAAACAACCGAGAATCCAAAGTTAGCTCACTTAGGTTTGAGAAATTCCTTTCCTTCCTCTTTAGAAGTCAATTGAAAAAAATATATCTATATACAGCATTTCCATAATAAAAATGAAGACACTCACGACTATAAACTGATTTTACCCTCGTATTTTGACAATAAGAGTTATGACCAAATAATTTGGTACGTCTCTTCAGATTTTTGGCCTACTTCGTCAGCAACAATGGTATGAACCAAGATGCCAAACATACACAAAATTGTTGATGATGCTGGGAAAGTGCAGGCAACCTGAGCAAGCAAGCTTGCTGTTTCAGATTATGTTGTCTGAGGGGTTGAAACCTTCTATTGATGTTTACACTGCTCTTGTTAGTGCTTATGGTCGCAGTGGCCTCCTTCACAAGGCCATTTCAACAGTAGATGAAATGAAATCAGTTTCTGACTGCAAGCCAGATGTACATACATATTCAATTCTCATTGATTGTTGCACAAGACTCCGTCGTCTCGATCTTCTGAAGGACATACTTGCTGATATGTCATATCTGGGGATCACATGTAATACGGTCACTTACAATACTATTATTAATGGATTTGGAAAGGCTAAAATGTTTGAGCAAATGGAAAGCTTGTTATTGGAAATGATTGAAAGTGATAGCTGCCTTCCAGATTTGATTACATTCAATTCTTTCATTAGAGCTTACGGAAATAGCGAGCAGATTGAGAAGATGGAGAAGTGGTATAATGAATTTCAGCTGATGGGAATTGAGCCAGACGTTTGGACATGCAATACTATGATCAGCTCATATGGGAAAGCTGGAATGTATGACAAAATGGTGTCTGTTTTAAGTTTCATGGAAAAACGCTTTTTCTCTCCAACAATTGTTACTATAAATACAATCATTGATGTGTTTGGAAGAGCTGGGAATATTGAGAAGATGGAAGAATACTTCAAAAAAATGAAATATCAGGGAATGAAGCCCAACTCTGTGACTTACTGTTCCCTTGTTAATGCTTATGGCAAATCTGGTAATATTGAGAAAGTTGATTCGATTTTGAGGCAAATTGAAAATTCTGATGTGGTACCAGATACCCCCCTATTTAACTGCCTTATCAATGTGTATGGCCTGGCTGGTGATGTGAGAAAGATGGGAGAGTTGTTCTTGGAAATGAAAGAGAATAAATGTGTGCCTGATAGCATAACATTTGCTACCATGATTCGTGTCTTAAATGCTCAAGGCATGACCGAGGCTGCTCAAAGATTGGAGAATAAGTTGATTGTCACCAGAGATGACAAGGTAAATTGATGCTTATTTATGATTTTGCATAACAGTTGTTTACAATAATAATGTTGTCATGTTGCCAAAATGAACATAGCTCGGTGGTTAAGGCATTACTACTTCTACTTCCTCCAAAAGGTCGTAGGTTCAAATTTCCCCAATCCATATGTGATGTAATACTCTAAAAAATAATGTTGTCATGTCACTCTTTTTCCTGTCCTATATATAAACGTCACGTTATGCTGACACAAGAAGATCTCTTACTTTCTAGTGCCTTTTCGTTTCAGCTGATTTCATGTTGTTCTCACGTACCAAAACTTTATGACCCTTCTACATCCCCTTTTTATCCTATTGGTTTGATGCAGTGAGGTGGGCTCTGAGAGAAAACCTGGCTTGACAAGGAAACAGTGCCTAACACTTCCCTAGTGTGGAAGACCCACAATGGTGTCACTAAGGGCATGGTTTTTTAAGTGATCTCTGTCTTCATTAGAGCAGGCCATTCTTCTCAATTCTTCAGGTAGATTCCATTAGTTTGTCACATTACAAATTTAAACCGAAGATTTCCATCTTGTTTCTTTTATTATTGCTCGCTTGTTTTATGAAAAATAATTTTCTGTTCCATTACACTTTCTGTAACTCCAAAGTTTTATGCTTATTCAGGCTCAATGTAGATCGCAAATCTTTCAAAAGTTGTGTCTTGTGATGGGGCAATGAATATCTTTCCACTACAAGGAAAGTTTCTTGATGGTCTTGAGTCTAAATGATCCATATGTTAACATGTAAGCGCACCTCTTTCCGTTCTCTATCTAATTGATTACGAAGAATTTCTCAAAATATAGTGTCACTAACACCATCCCAGCAGTTACCACTCATTTAAATTGCTTACATGAAAATGCGGAATGCTATTGGTTTAAAGAAAGGCTTAGTAACATAGTCTTAGTGAGTTCAATTTGAACCTAGCTCAATAGATTAGGTACCTGTAGCTATTCCAAAGGTCAATGGTTCAATCCCCACCCATGTACTTGTTGAACTTAAAAAAAACATAAACTTAGTGAGACCAACTCCACTCATAACCAAATCTAAATTCAACAAATTTTCAGTTCAATTTGCACTCGTGACACAGTATATGCATCTACTTTTACATTTCCACTCGTGATTACATTGCTAATTCCTGTATGATATTATTGTATTTGACAGGAAAACTATGTTCTTGACCAGTGACCCCACCCCCCATAAGCCTAATGGGACTACTATTTCTTCTCAAAACAATCAACCGTTAGCAACAAAACATTCCTCTCTGGTCTTTTCAGAGCTATCTGAATATCACAAATGATTTGGTGCTAGAGGAGCTCTAGCTCTCTAGCATATGGCTTGCAGTGGCTGGAATTGGACTACAGCTCAACTCAAGATGCTCCTCATACTGTTAACTGTGGCCAGACGCCTTATGCATAATCTTCTGGTATCTTTTCACTGTAGCTCATTGCCCTATTGCATAATCTTCTGGTATCTTTCACTGTGATCCAAGTTGTGCTCATCTAAAACTTGTCTATAGACATCCTTGCATCCACATTCCTACTTTACAGCTGCCTATAGAAGATGAAGAGGTCTAGGTTCTGACTTCTGAGGAAAATATAGCATTTGTTAGTCTTCTCCCTAAATGAGAGAATCTATTGTGTGCTTTAGACAGCTTTCAAAGAACAGAGTAATGGCTCTTACCATATTGACATATTTTTCTTAGTTGCATTTTCTGTCTTCTGATTATCATGTCTTGATAAGATTCTTTGTAGGGACTTAATTGAATAGGATAGGGAAGAGGATTTTTCCCCCTTAATTAATTTGGAGGATGGAGGACTTCTCTTCTAATCCCAATACTGGATCACACAGTATCCAGAGTTTGGTTGGGGGTTGATTTTCTATGTTCAAATGATGAACTGCTCAATAAGGTTCCCATTTATTTATTATTATTATATTTGTTTAATTTATAAATTTACAAGTTGGTTT

mRNA sequence

CTTTCATCAGTCCAGTATATTCCTTCGAATGGAGCCTCGCCTTCACGATGCCCCAATCTTCCGCTGGTCGTCAATTCCCCTAACCTCCACAGTCGCTTCAATGGTTTCCATAAGCTCCACTTCTTCCTTCATCACTTCTTCCTACTCACGGTCACTTAAGCGGAGTTCCAGCCAGTCCTCCGACGGCCTACAGAGAGATCCGAAGAAGGGTCTGTCTCGGATTCTGAGGAAAGACGCTGCCATTAGAGCTATAGAGAGGAAAGCCAACTCCAAGAAGTACAATAACCTTTGGCCCAAAGCTGTTTTGGAGGCTCTCGACGAGGCTATTCAGGAGAATCTCTGGGAAACCGCTCTTAAGATTTTTGGCCTACTTCGTCAGCAACAATGGTATGAACCAAGATGCCAAACATACACAAAATTGTTGATGATGCTGGGAAAGTGCAGGCAACCTGAGCAAGCAAGCTTGCTGTTTCAGATTATGTTGTCTGAGGGGTTGAAACCTTCTATTGATGTTTACACTGCTCTTGTTAGTGCTTATGGTCGCAGTGGCCTCCTTCACAAGGCCATTTCAACAGTAGATGAAATGAAATCAGTTTCTGACTGCAAGCCAGATGTACATACATATTCAATTCTCATTGATTGTTGCACAAGACTCCGTCGTCTCGATCTTCTGAAGGACATACTTGCTGATATGTCATATCTGGGGATCACATGTAATACGGTCACTTACAATACTATTATTAATGGATTTGGAAAGGCTAAAATGTTTGAGCAAATGGAAAGCTTGTTATTGGAAATGATTGAAAGTGATAGCTGCCTTCCAGATTTGATTACATTCAATTCTTTCATTAGAGCTTACGGAAATAGCGAGCAGATTGAGAAGATGGAGAAGTGGTATAATGAATTTCAGCTGATGGGAATTGAGCCAGACGTTTGGACATGCAATACTATGATCAGCTCATATGGGAAAGCTGGAATGTATGACAAAATGGTGTCTGTTTTAAGTTTCATGGAAAAACGCTTTTTCTCTCCAACAATTGTTACTATAAATACAATCATTGATGTGTTTGGAAGAGCTGGGAATATTGAGAAGATGGAAGAATACTTCAAAAAAATGAAATATCAGGGAATGAAGCCCAACTCTGTGACTTACTGTTCCCTTGTTAATGCTTATGGCAAATCTGGTAATATTGAGAAAGTTGATTCGATTTTGAGGCAAATTGAAAATTCTGATGTGGTACCAGATACCCCCCTATTTAACTGCCTTATCAATGTGTATGGCCTGGCTGGTGATGTGAGAAAGATGGGAGAGTTGTTCTTGGAAATGAAAGAGAATAAATGTGTGCCTGATAGCATAACATTTGCTACCATGATTCGTGTCTTAAATGCTCAAGGCATGACCGAGGCTGCTCAAAGATTGGAGAATAAGTTGATTGTCACCAGAGATGACAAGTGAGGTGGGCTCTGAGAGAAAACCTGGCTTGACAAGGAAACAGTGCCTAACACTTCCCTAGTGTGGAAGACCCACAATGGTGTCACTAAGGGCATGGTTTTTTAAGTGATCTCTGTCTTCATTAGAGCAGGCCATTCTTCTCAATTCTTCAGGCTCAATGTAGATCGCAAATCTTTCAAAAGTTGTGTCTTGTGATGGGGCAATGAATATCTTTCCACTACAAGGAAAGTTTCTTGATGGTCTTGAGTCTAAATGATCCATATGTTAACATGAAAACTATGTTCTTGACCAGTGACCCCACCCCCCATAAGCCTAATGGGACTACTATTTCTTCTCAAAACAATCAACCGTTAGCAACAAAACATTCCTCTCTGGTCTTTTCAGAGCTATCTGAATATCACAAATGATTTGGTGCTAGAGGAGCTCTAGCTCTCTAGCATATGGCTTGCAGTGGCTGGAATTGGACTACAGCTCAACTCAAGATGCTCCTCATACTGTTAACTGTGGCCAGACGCCTTATGCATAATCTTCTGGTATCTTTTCACTGTAGCTCATTGCCCTATTGCATAATCTTCTGGTATCTTTCACTGTGATCCAAGTTGTGCTCATCTAAAACTTGTCTATAGACATCCTTGCATCCACATTCCTACTTTACAGCTGCCTATAGAAGATGAAGAGGTCTAGGTTCTGACTTCTGAGGAAAATATAGCATTTGTTAGTCTTCTCCCTAAATGAGAGAATCTATTGTGTGCTTTAGACAGCTTTCAAAGAACAGAGTAATGGCTCTTACCATATTGACATATTTTTCTTAGTTGCATTTTCTGTCTTCTGATTATCATGTCTTGATAAGATTCTTTGTAGGGACTTAATTGAATAGGATAGGGAAGAGGATTTTTCCCCCTTAATTAATTTGGAGGATGGAGGACTTCTCTTCTAATCCCAATACTGGATCACACAGTATCCAGAGTTTGGTTGGGGGTTGATTTTCTATGTTCAAATGATGAACTGCTCAATAAGGTTCCCATTTATTTATTATTATTATATTTGTTTAATTTATAAATTTACAAGTTGGTTT

Coding sequence (CDS)

ATGGAGCCTCGCCTTCACGATGCCCCAATCTTCCGCTGGTCGTCAATTCCCCTAACCTCCACAGTCGCTTCAATGGTTTCCATAAGCTCCACTTCTTCCTTCATCACTTCTTCCTACTCACGGTCACTTAAGCGGAGTTCCAGCCAGTCCTCCGACGGCCTACAGAGAGATCCGAAGAAGGGTCTGTCTCGGATTCTGAGGAAAGACGCTGCCATTAGAGCTATAGAGAGGAAAGCCAACTCCAAGAAGTACAATAACCTTTGGCCCAAAGCTGTTTTGGAGGCTCTCGACGAGGCTATTCAGGAGAATCTCTGGGAAACCGCTCTTAAGATTTTTGGCCTACTTCGTCAGCAACAATGGTATGAACCAAGATGCCAAACATACACAAAATTGTTGATGATGCTGGGAAAGTGCAGGCAACCTGAGCAAGCAAGCTTGCTGTTTCAGATTATGTTGTCTGAGGGGTTGAAACCTTCTATTGATGTTTACACTGCTCTTGTTAGTGCTTATGGTCGCAGTGGCCTCCTTCACAAGGCCATTTCAACAGTAGATGAAATGAAATCAGTTTCTGACTGCAAGCCAGATGTACATACATATTCAATTCTCATTGATTGTTGCACAAGACTCCGTCGTCTCGATCTTCTGAAGGACATACTTGCTGATATGTCATATCTGGGGATCACATGTAATACGGTCACTTACAATACTATTATTAATGGATTTGGAAAGGCTAAAATGTTTGAGCAAATGGAAAGCTTGTTATTGGAAATGATTGAAAGTGATAGCTGCCTTCCAGATTTGATTACATTCAATTCTTTCATTAGAGCTTACGGAAATAGCGAGCAGATTGAGAAGATGGAGAAGTGGTATAATGAATTTCAGCTGATGGGAATTGAGCCAGACGTTTGGACATGCAATACTATGATCAGCTCATATGGGAAAGCTGGAATGTATGACAAAATGGTGTCTGTTTTAAGTTTCATGGAAAAACGCTTTTTCTCTCCAACAATTGTTACTATAAATACAATCATTGATGTGTTTGGAAGAGCTGGGAATATTGAGAAGATGGAAGAATACTTCAAAAAAATGAAATATCAGGGAATGAAGCCCAACTCTGTGACTTACTGTTCCCTTGTTAATGCTTATGGCAAATCTGGTAATATTGAGAAAGTTGATTCGATTTTGAGGCAAATTGAAAATTCTGATGTGGTACCAGATACCCCCCTATTTAACTGCCTTATCAATGTGTATGGCCTGGCTGGTGATGTGAGAAAGATGGGAGAGTTGTTCTTGGAAATGAAAGAGAATAAATGTGTGCCTGATAGCATAACATTTGCTACCATGATTCGTGTCTTAAATGCTCAAGGCATGACCGAGGCTGCTCAAAGATTGGAGAATAAGTTGATTGTCACCAGAGATGACAAGTGA

Protein sequence

MEPRLHDAPIFRWSSIPLTSTVASMVSISSTSSFITSSYSRSLKRSSSQSSDGLQRDPKKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQQWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEEYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVYGLAGDVRKMGELFLEMKENKCVPDSITFATMIRVLNAQGMTEAAQRLENKLIVTRDDK
Homology
BLAST of Lcy05g004540 vs. ExPASy Swiss-Prot
Match: Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 1.3e-162
Identity = 276/429 (64.34%), Postives = 344/429 (80.19%), Query Frame = 0

Query: 41  RSLKRSSSQSSDGLQRDPKKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAI 100
           R+ K +S   S   Q DPKK LSRILR DAA++ IERKANS+KY  LWPKAVLEALDEAI
Sbjct: 10  RTEKMNSGLISTRHQVDPKKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAI 69

Query: 101 QENLWETALKIFGLLRQQQWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSI 160
           +EN W++ALKIF LLR+Q WYEPRC+TYTKL  +LG C+QP+QASLLF++MLSEGLKP+I
Sbjct: 70  KENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTI 129

Query: 161 DVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDILA 220
           DVYT+L+S YG+S LL KA ST++ MKSVSDCKPDV T+++LI CC +L R DL+K I+ 
Sbjct: 130 DVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVL 189

Query: 221 DMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCLPDLITFNSFIRAYGNS 280
           +MSYLG+ C+TVTYNTII+G+GKA MFE+MES+L +MIE    LPD+ T NS I +YGN 
Sbjct: 190 EMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNG 249

Query: 281 EQIEKMEKWYNEFQLMGIEPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRFFSPTIVTI 340
             + KME WY+ FQLMG++PD+ T N +I S+GKAGMY KM SV+ FMEKRFFS T VT 
Sbjct: 250 RNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTY 309

Query: 341 NTIIDVFGRAGNIEKMEEYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIEN 400
           N +I+ FG+AG IEKM++ F+KMKYQG+KPNS+TYCSLVNAY K+G + K+DS+LRQI N
Sbjct: 310 NIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVN 369

Query: 401 SDVVPDTPLFNCLINVYGLAGDVRKMGELFLEMKENKCVPDSITFATMIRVLNAQGMTEA 460
           SDVV DTP FNC+IN YG AGD+  M EL+++M+E KC PD ITFATMI+   A G+ +A
Sbjct: 370 SDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDA 429

Query: 461 AQRLENKLI 470
            Q LE ++I
Sbjct: 430 VQELEKQMI 438

BLAST of Lcy05g004540 vs. ExPASy Swiss-Prot
Match: Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 370.9 bits (951), Expect = 2.1e-101
Identity = 190/406 (46.80%), Postives = 270/406 (66.50%), Query Frame = 0

Query: 59  KKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ 118
           +K +S ILR++A    IE+K  SKK   L P+ VLE+L E I    WE+A+++F LLR+Q
Sbjct: 87  RKAISIILRREATKSIIEKKKGSKK---LLPRTVLESLHERITALRWESAIQVFELLREQ 146

Query: 119 QWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK 178
            WY+P    Y KL++MLGKC+QPE+A  LFQ M++EG   + +VYTALVSAY RSG    
Sbjct: 147 LWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDA 206

Query: 179 AISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTII 238
           A + ++ MKS  +C+PDVHTYSILI    ++   D ++D+L+DM   GI  NT+TYNT+I
Sbjct: 207 AFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLI 266

Query: 239 NGFGKAKMFEQMESLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 298
           + +GKAKMF +MES L++M+  D C PD  T NS +RA+G + QIE ME  Y +FQ  GI
Sbjct: 267 DAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGI 326

Query: 299 EPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEE 358
           EP++ T N ++ SYGK+G Y KM +V+ +M+K  +S TIVT N +ID FGRAG++++ME 
Sbjct: 327 EPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEY 386

Query: 359 YFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVYG 418
            F+ M+ + + P+ VT CSLV AYG++   +K+  +LR IENSD+  D   FNCL++ YG
Sbjct: 387 LFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYG 446

Query: 419 LAGDVRKMGELFLEMKENKCVPDSITFATMIRVLNAQGMTEAAQRL 465
                 +M  +   M++    PD IT+ TM++     GMT   + L
Sbjct: 447 RMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489

BLAST of Lcy05g004540 vs. ExPASy Swiss-Prot
Match: Q9SQU6 (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=1 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 5.2e-84
Identity = 156/396 (39.39%), Postives = 240/396 (60.61%), Query Frame = 0

Query: 72  IRAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQQWYEPRCQTYTKL 131
           I+ +++K + +   N W   V E L + I +  W  AL++F +LR+Q +Y+P+  TY KL
Sbjct: 71  IKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKL 130

Query: 132 LMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSD 191
           L++LGK  QP +A  LF  ML EGL+P++++YTAL++AY RS L+  A S +D+MKS   
Sbjct: 131 LVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQ 190

Query: 192 CKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQME 251
           C+PDV TYS L+  C    + DL+  +  +M    IT NTVT N +++G+G+   F+QME
Sbjct: 191 CQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQME 250

Query: 252 SLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTCNTMISS 311
            +L +M+ S +C PD+ T N  +  +GN  +I+ ME WY +F+  GIEP+  T N +I S
Sbjct: 251 KVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGS 310

Query: 312 YGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEEYFKKMKYQGMKPN 371
           YGK  MYDKM SV+ +M K  F  T  T N II+ F   G+ + ME  F +M+ +GMK +
Sbjct: 311 YGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKAD 370

Query: 372 SVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVYGLAGDVRKMGELFL 431
           + T+C L+N Y  +G   KV S ++     ++  +T  +N +I+    A D+ +M  +++
Sbjct: 371 TKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYI 430

Query: 432 EMKENKCVPDSITFATMIRVLNAQGMTEAAQRLENK 468
            MKE +CV DS TF  M+     +GM +    LE +
Sbjct: 431 RMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQE 466

BLAST of Lcy05g004540 vs. ExPASy Swiss-Prot
Match: Q9SV96 (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.8e-43
Identity = 100/363 (27.55%), Postives = 187/363 (51.52%), Query Frame = 0

Query: 97  DEAIQENLWETALKIFGLLRQQQWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGL 156
           +E  + + W   L++F  +++Q+WY P    Y+KL+ ++GK  Q   A  LF  M + G 
Sbjct: 105 EELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGC 164

Query: 157 KPSIDVYTALVSAY----GRSGLLHKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRL 216
           +P   VY AL++A+     ++  L K    +D+MK +  C+P+V TY+IL+    +  ++
Sbjct: 165 RPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKV 224

Query: 217 DLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCLPDLITFNS 276
           D +  +  D+    ++ +  T+N +++ +GK  M ++ME++L  M  S+ C PD+ITFN 
Sbjct: 225 DQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNV 284

Query: 277 FIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRF 336
            I +YG  ++ EKME+ +        +P + T N+MI +YGKA M DK   V   M    
Sbjct: 285 LIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMN 344

Query: 337 FSPTIVTINTIIDVFGRAGNIEKMEEYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVD 396
           + P+ +T   +I ++G  G++ +  E F+++        + T  +++  Y ++G   + D
Sbjct: 345 YIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEAD 404

Query: 397 SILRQIENSDVVPDTPLFNCLINVYGLAGDVRKMGELFLEMKENKCVPDSITFATMIRVL 456
            +        V PD   +  L   Y  A    ++  L  +M+++  VP+   F   + V 
Sbjct: 405 KLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVF 464

BLAST of Lcy05g004540 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.7e-42
Identity = 106/407 (26.04%), Postives = 204/407 (50.12%), Query Frame = 0

Query: 60  KGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAI-QENLWETALKIFGLLRQQ 119
           KGL    + D A+RA +     K Y ++   +V+  +   + +E    +A  +F  L Q+
Sbjct: 143 KGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGL-QE 202

Query: 120 QWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGL-LH 179
             +     +YT L+       +  +A  +F+ M  +G KP++  Y  +++ +G+ G   +
Sbjct: 203 DGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWN 262

Query: 180 KAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTI 239
           K  S V++MKS     PD +TY+ LI CC R         +  +M   G + + VTYN +
Sbjct: 263 KITSLVEKMKS-DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 322

Query: 240 INGFGKAKMFEQMESLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMG 299
           ++ +GK+   ++   +L EM+  +   P ++T+NS I AY     +++  +  N+    G
Sbjct: 323 LDVYGKSHRPKEAMKVLNEMV-LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 382

Query: 300 IEPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKME 359
            +PDV+T  T++S + +AG  +  +S+   M      P I T N  I ++G  G   +M 
Sbjct: 383 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 442

Query: 360 EYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVY 419
           + F ++   G+ P+ VT+ +L+  +G++G   +V  + ++++ +  VP+   FN LI+ Y
Sbjct: 443 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 502

Query: 420 GLAGDVRKMGELFLEMKENKCVPDSITFATMIRVLNAQGMTEAAQRL 465
              G   +   ++  M +    PD  T+ T++  L   GM E ++++
Sbjct: 503 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546

BLAST of Lcy05g004540 vs. ExPASy TrEMBL
Match: A0A6J1HAD9 (pentatricopeptide repeat-containing protein At3g53170 OS=Cucurbita moschata OX=3662 GN=LOC111461045 PE=4 SV=1)

HSP 1 Score: 841.6 bits (2173), Expect = 1.6e-240
Identity = 427/477 (89.52%), Postives = 446/477 (93.50%), Query Frame = 0

Query: 1   MEP--RLHDAPIFRWSSIPLTSTVASMVSISSTSSFITSSYSRSLKRSSSQSSDGLQRDP 60
           MEP   LH+APIF W S P TSTVASM SI+ T  FI+SS SR L R+S QSSDGLQRDP
Sbjct: 1   MEPHLHLHNAPIFGWLSFPPTSTVASMASINPTPFFISSSRSRKLNRTSDQSSDGLQRDP 60

Query: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ 120
           KKGLSRILRKDAAIRAIERKANSKKYNNLWP+AVLEALDEAIQENLWET LKIFGLLRQQ
Sbjct: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPRAVLEALDEAIQENLWETTLKIFGLLRQQ 120

Query: 121 QWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK 180
            WYEPRC+TYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLH+
Sbjct: 121 HWYEPRCKTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHE 180

Query: 181 AISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTII 240
           AI TVDEMKS+SDCKPDVHTYSILIDCCTR RRLDLLKDILADMSYLGITCNTVTYNTII
Sbjct: 181 AIETVDEMKSISDCKPDVHTYSILIDCCTRFRRLDLLKDILADMSYLGITCNTVTYNTII 240

Query: 241 NGFGKAKMFEQMESLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300
           NGFGKAKMFEQMESLLLEMIES SCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI
Sbjct: 241 NGFGKAKMFEQMESLLLEMIESGSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300

Query: 301 EPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEE 360
           EPD WT NTMISSYGKA MYDKMVSVL+FMEKRFFSPTIVT+NTIIDVFGRAGN+++MEE
Sbjct: 301 EPDDWTYNTMISSYGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNVKRMEE 360

Query: 361 YFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVYG 420
           YF+KMK+QGMKPNSVTYCSLVNAYGK+GNIEKVDSILRQIENSDVV DTPLFNCLINVYG
Sbjct: 361 YFRKMKHQGMKPNSVTYCSLVNAYGKAGNIEKVDSILRQIENSDVVLDTPLFNCLINVYG 420

Query: 421 LAGDVRKMGELFLEMKENKCVPDSITFATMIRVLNAQGMTEAAQRLENKLIVTRDDK 476
            AGDVRKMGELFLEMKEN+CVPDSITFATM+  L   GMTEAAQRLENKLIV RD+K
Sbjct: 421 QAGDVRKMGELFLEMKENRCVPDSITFATMVHALKTHGMTEAAQRLENKLIVGRDNK 477

BLAST of Lcy05g004540 vs. ExPASy TrEMBL
Match: A0A1S3CEG4 (pentatricopeptide repeat-containing protein At3g53170 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499948 PE=4 SV=1)

HSP 1 Score: 839.0 bits (2166), Expect = 1.0e-239
Identity = 427/477 (89.52%), Postives = 447/477 (93.71%), Query Frame = 0

Query: 1   MEPRLH--DAPIFRWSSIPLTSTVASMVSISSTSSFITSSYSRSLKRSSSQSSDGLQRDP 60
           ME  LH  DA IFR  S   TSTV SM S+SST  FI+SS+SRSLKRSS+QSSD LQRDP
Sbjct: 1   MELYLHSPDATIFRCFSTSFTSTVISMTSMSSTPYFISSSHSRSLKRSSTQSSDALQRDP 60

Query: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ 120
           KKGLSRILRKDAAI+AIE+KANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ
Sbjct: 61  KKGLSRILRKDAAIKAIEKKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ 120

Query: 121 QWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK 180
           QWYEPRCQTYTKLLM+LGKCRQPEQASLLF+IM SEGLKPSIDVYTALVSAYG+SGLLHK
Sbjct: 121 QWYEPRCQTYTKLLMLLGKCRQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHK 180

Query: 181 AISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTII 240
           AISTVDEMKSVSDCKPDVHTYSILIDCCTRLRR DLLK++LADMSYLGITCNTVTYNTII
Sbjct: 181 AISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKELLADMSYLGITCNTVTYNTII 240

Query: 241 NGFGKAKMFEQMESLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300
           NGFGKAKMFEQMESLLLEMIESDSC PDLITFN+FIRAYGNSEQIEKMEKWY+EFQLMGI
Sbjct: 241 NGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYDEFQLMGI 300

Query: 301 EPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEE 360
           EPDVWT NTMISSYGKAGMYDKM SVL+FMEKRFFSPTIVT+NTIID FGR GNIE+MEE
Sbjct: 301 EPDVWTYNTMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDTFGRTGNIEEMEE 360

Query: 361 YFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVYG 420
           YFKKMK+QGMKPNSVTYCSLVNAYGKSG++EK+DSILRQIENSDVVPDTPLFNCLIN YG
Sbjct: 361 YFKKMKFQGMKPNSVTYCSLVNAYGKSGDLEKIDSILRQIENSDVVPDTPLFNCLINAYG 420

Query: 421 LAGDVRKMGELFLEMKENKCVPDSITFATMIRVLNAQGMTEAAQRLENKLIVTRDDK 476
            AGDVRKMGELFLEMKENKCVPD ITFATMIR L AQGMTEAAQRLENKLI T D K
Sbjct: 421 QAGDVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEAAQRLENKLIATNDVK 477

BLAST of Lcy05g004540 vs. ExPASy TrEMBL
Match: A0A1S3CFP9 (pentatricopeptide repeat-containing protein At3g53170 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499948 PE=4 SV=1)

HSP 1 Score: 838.2 bits (2164), Expect = 1.7e-239
Identity = 426/475 (89.68%), Postives = 446/475 (93.89%), Query Frame = 0

Query: 1   MEPRLH--DAPIFRWSSIPLTSTVASMVSISSTSSFITSSYSRSLKRSSSQSSDGLQRDP 60
           ME  LH  DA IFR  S   TSTV SM S+SST  FI+SS+SRSLKRSS+QSSD LQRDP
Sbjct: 1   MELYLHSPDATIFRCFSTSFTSTVISMTSMSSTPYFISSSHSRSLKRSSTQSSDALQRDP 60

Query: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ 120
           KKGLSRILRKDAAI+AIE+KANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ
Sbjct: 61  KKGLSRILRKDAAIKAIEKKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ 120

Query: 121 QWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK 180
           QWYEPRCQTYTKLLM+LGKCRQPEQASLLF+IM SEGLKPSIDVYTALVSAYG+SGLLHK
Sbjct: 121 QWYEPRCQTYTKLLMLLGKCRQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHK 180

Query: 181 AISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTII 240
           AISTVDEMKSVSDCKPDVHTYSILIDCCTRLRR DLLK++LADMSYLGITCNTVTYNTII
Sbjct: 181 AISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRFDLLKELLADMSYLGITCNTVTYNTII 240

Query: 241 NGFGKAKMFEQMESLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300
           NGFGKAKMFEQMESLLLEMIESDSC PDLITFN+FIRAYGNSEQIEKMEKWY+EFQLMGI
Sbjct: 241 NGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYDEFQLMGI 300

Query: 301 EPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEE 360
           EPDVWT NTMISSYGKAGMYDKM SVL+FMEKRFFSPTIVT+NTIID FGR GNIE+MEE
Sbjct: 301 EPDVWTYNTMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDTFGRTGNIEEMEE 360

Query: 361 YFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVYG 420
           YFKKMK+QGMKPNSVTYCSLVNAYGKSG++EK+DSILRQIENSDVVPDTPLFNCLIN YG
Sbjct: 361 YFKKMKFQGMKPNSVTYCSLVNAYGKSGDLEKIDSILRQIENSDVVPDTPLFNCLINAYG 420

Query: 421 LAGDVRKMGELFLEMKENKCVPDSITFATMIRVLNAQGMTEAAQRLENKLIVTRD 474
            AGDVRKMGELFLEMKENKCVPD ITFATMIR L AQGMTEAAQRLENKLI T D
Sbjct: 421 QAGDVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEAAQRLENKLIATND 475

BLAST of Lcy05g004540 vs. ExPASy TrEMBL
Match: A0A0A0K9Q1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426480 PE=4 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 4.4e-235
Identity = 419/475 (88.21%), Postives = 442/475 (93.05%), Query Frame = 0

Query: 1   MEPRLH--DAPIFRWSSIPLTSTVASMVSISSTSSFITSSYSRSLKRSSSQSSDGLQRDP 60
           ME  LH  DA +FR  S   TS V SM S+SST  FI+SS+SRSLKR+S+QSSD LQRDP
Sbjct: 1   MELCLHSPDATVFRCFSTSFTSKVISMASVSSTPYFISSSHSRSLKRTSTQSSDALQRDP 60

Query: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ 120
           KKGLSRILR+DAAI+AIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ
Sbjct: 61  KKGLSRILRRDAAIKAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ 120

Query: 121 QWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK 180
           QWYEPRCQTYTKLLM+LGKC+QPEQASLLF+IM SEGLKPSIDVYTALVSAYG+SGLLHK
Sbjct: 121 QWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHK 180

Query: 181 AISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTII 240
           AISTVDEMKS+SDCKPDVHTYSILIDCCTRLRR DLLK ILADMS LGITCNTVTYNTII
Sbjct: 181 AISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVTYNTII 240

Query: 241 NGFGKAKMFEQMESLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300
           NGFGKAKMFEQMESLLLEMIESDSC PDLITFN+FIRAYGNSEQIEKMEKWY EFQLMGI
Sbjct: 241 NGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGI 300

Query: 301 EPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEE 360
           EPD+WT N+MISSYGKAGMYDKM SVL+FMEKRFFSPTIVT+NTIID FGRAGNIE+MEE
Sbjct: 301 EPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEE 360

Query: 361 YFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVYG 420
           YFK MK+QGMKPNSVTYCSLVNAYGKSG++EKVDSILRQIENSDVVPDTPLFNCLINVYG
Sbjct: 361 YFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINVYG 420

Query: 421 LAGDVRKMGELFLEMKENKCVPDSITFATMIRVLNAQGMTEAAQRLENKLIVTRD 474
            AG+VRKMGELFLEMKENKCVPD ITFATMIR L AQGMTE AQRLENKLI T D
Sbjct: 421 QAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEDAQRLENKLIATND 475

BLAST of Lcy05g004540 vs. ExPASy TrEMBL
Match: A0A6J1KQP7 (pentatricopeptide repeat-containing protein At3g53170 OS=Cucurbita maxima OX=3661 GN=LOC111497808 PE=4 SV=1)

HSP 1 Score: 813.9 bits (2101), Expect = 3.5e-232
Identity = 412/451 (91.35%), Postives = 426/451 (94.46%), Query Frame = 0

Query: 25  MVSISSTSSFITSSYSRSLKRSSSQSSDGLQRDPKKGLSRILRKDAAIRAIERKANSKKY 84
           M SI+ T  FI+SS SR L R+S QSSDGLQRD KKGLSRILRKDAAIRAIERKANSKKY
Sbjct: 1   MASINPTPLFISSSRSRKLNRTSDQSSDGLQRDLKKGLSRILRKDAAIRAIERKANSKKY 60

Query: 85  NNLWPKAVLEALDEAIQENLWETALKIFGLLRQQQWYEPRCQTYTKLLMMLGKCRQPEQA 144
           NNLWP AVLEALDEAIQENLWET LKIFGLLRQQ WYEPRC+TYTKLLMMLGKCRQP+QA
Sbjct: 61  NNLWPSAVLEALDEAIQENLWETTLKIFGLLRQQHWYEPRCKTYTKLLMMLGKCRQPKQA 120

Query: 145 SLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILID 204
           SLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAI TVDEMKS+SDCKPDVHTYSILID
Sbjct: 121 SLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAIETVDEMKSISDCKPDVHTYSILID 180

Query: 205 CCTRLRRLDLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCL 264
           CCTR RRLDLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIES SCL
Sbjct: 181 CCTRFRRLDLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESGSCL 240

Query: 265 PDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTCNTMISSYGKAGMYDKMVSV 324
           PDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPD WT NTMISSYGKA MYDKMVSV
Sbjct: 241 PDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDDWTYNTMISSYGKARMYDKMVSV 300

Query: 325 LSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEEYFKKMKYQGMKPNSVTYCSLVNAYGK 384
           L+FMEKRFFSPTIVT+NTIIDVFGRAGNI++MEEYF+KMKYQGMKPNSVTYCSLVNAYGK
Sbjct: 301 LNFMEKRFFSPTIVTMNTIIDVFGRAGNIKRMEEYFRKMKYQGMKPNSVTYCSLVNAYGK 360

Query: 385 SGNIEKVDSILRQIENSDVVPDTPLFNCLINVYGLAGDVRKMGELFLEMKENKCVPDSIT 444
           +GNIEKVDSILRQIENSDVV DTPLFNCLINVYG AGDVRKMGELFLEM+ENKCVPDSIT
Sbjct: 361 AGNIEKVDSILRQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLEMEENKCVPDSIT 420

Query: 445 FATMIRVLNAQGMTEAAQRLENKLIVTRDDK 476
           FATM+  L   GMTEAAQRLENKLIVTRDDK
Sbjct: 421 FATMVHALKTHGMTEAAQRLENKLIVTRDDK 451

BLAST of Lcy05g004540 vs. NCBI nr
Match: KAG7025638.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 844.7 bits (2181), Expect = 3.8e-241
Identity = 429/477 (89.94%), Postives = 446/477 (93.50%), Query Frame = 0

Query: 1   MEPRLH--DAPIFRWSSIPLTSTVASMVSISSTSSFITSSYSRSLKRSSSQSSDGLQRDP 60
           MEP LH  +APIF W S P TSTVASM SI+ T  FI+SS SR L R+S QSSDGLQRDP
Sbjct: 1   MEPHLHLLNAPIFGWLSFPPTSTVASMASINPTPFFISSSRSRKLNRTSDQSSDGLQRDP 60

Query: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ 120
           KKGLSRILRKDAAIRAIERKANSKKYNNLWP+AVLEALDEAIQENLWET LKIFGLLRQQ
Sbjct: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPRAVLEALDEAIQENLWETTLKIFGLLRQQ 120

Query: 121 QWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK 180
            WYEPRC+TYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK
Sbjct: 121 HWYEPRCKTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK 180

Query: 181 AISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTII 240
           AI TVDEMKS+SDCKPDVHTYSILIDCCTR RRLDLLKDILADMSYLGITCNTVTYNTII
Sbjct: 181 AIETVDEMKSISDCKPDVHTYSILIDCCTRYRRLDLLKDILADMSYLGITCNTVTYNTII 240

Query: 241 NGFGKAKMFEQMESLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300
           NGFGKAKMFEQMESLLLEMIES SCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI
Sbjct: 241 NGFGKAKMFEQMESLLLEMIESGSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300

Query: 301 EPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEE 360
           EPD WT NTMISSYGKA MYDKMVSVL+FMEKRFFSPTIVT+NTIIDVFGRAGN+++MEE
Sbjct: 301 EPDDWTYNTMISSYGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNVKRMEE 360

Query: 361 YFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVYG 420
           YF+KMK+QGMKPNSVTYCSLVNAYGK+GNIEKVDSILRQIENSDVV DTPLFNCLINVYG
Sbjct: 361 YFRKMKHQGMKPNSVTYCSLVNAYGKAGNIEKVDSILRQIENSDVVLDTPLFNCLINVYG 420

Query: 421 LAGDVRKMGELFLEMKENKCVPDSITFATMIRVLNAQGMTEAAQRLENKLIVTRDDK 476
            AGDVRKMGELFLEMKENKC+PDSITFATM+  L   GMTEAAQRLENKLIV RDDK
Sbjct: 421 QAGDVRKMGELFLEMKENKCLPDSITFATMVHALKTHGMTEAAQRLENKLIVGRDDK 477

BLAST of Lcy05g004540 vs. NCBI nr
Match: XP_023515060.1 (pentatricopeptide repeat-containing protein At3g53170 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 844.7 bits (2181), Expect = 3.8e-241
Identity = 429/477 (89.94%), Postives = 446/477 (93.50%), Query Frame = 0

Query: 1   MEPRLH--DAPIFRWSSIPLTSTVASMVSISSTSSFITSSYSRSLKRSSSQSSDGLQRDP 60
           MEP LH  +APIF W S P TSTVASM SI+ T  FI+SS SR L R+S QSSDGLQRDP
Sbjct: 1   MEPHLHLSNAPIFGWLSFPPTSTVASMASINPTPFFISSSRSRKLNRTSDQSSDGLQRDP 60

Query: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ 120
           KKGLSRILRKDAAIRAIERKANSKKYNNLWP+AVLEALDEAIQENLWET LKIFGLLRQQ
Sbjct: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPRAVLEALDEAIQENLWETTLKIFGLLRQQ 120

Query: 121 QWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK 180
            WYEPRC+TYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK
Sbjct: 121 HWYEPRCKTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK 180

Query: 181 AISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTII 240
           AI TVDEMKS+SDCKPDVHTYSILIDCCTR RRLDLLKDILADMSYLGITCNTVTYNTII
Sbjct: 181 AIETVDEMKSISDCKPDVHTYSILIDCCTRYRRLDLLKDILADMSYLGITCNTVTYNTII 240

Query: 241 NGFGKAKMFEQMESLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300
           NGFGKAKMFEQMESLLLEMIE+ SCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI
Sbjct: 241 NGFGKAKMFEQMESLLLEMIETGSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300

Query: 301 EPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEE 360
           EPD WT NTMISSYGKA MYDKMVSVL+FMEKRFFSPTIVT+NTIIDVFGRAGN+++MEE
Sbjct: 301 EPDDWTYNTMISSYGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNVKRMEE 360

Query: 361 YFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVYG 420
           YF+KMK+QGMKPNSVTYCSLVNAYGK+GNIEKVDSILRQIENSDVV DTPLFNCLINVYG
Sbjct: 361 YFRKMKHQGMKPNSVTYCSLVNAYGKAGNIEKVDSILRQIENSDVVLDTPLFNCLINVYG 420

Query: 421 LAGDVRKMGELFLEMKENKCVPDSITFATMIRVLNAQGMTEAAQRLENKLIVTRDDK 476
            AGDVRKMGELFLEMKENKCVPDSITFATM+  L   GMTEAAQRLENKLIV RDDK
Sbjct: 421 QAGDVRKMGELFLEMKENKCVPDSITFATMVHALKTHGMTEAAQRLENKLIVGRDDK 477

BLAST of Lcy05g004540 vs. NCBI nr
Match: KAG6593286.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 844.0 bits (2179), Expect = 6.5e-241
Identity = 428/477 (89.73%), Postives = 446/477 (93.50%), Query Frame = 0

Query: 1   MEP--RLHDAPIFRWSSIPLTSTVASMVSISSTSSFITSSYSRSLKRSSSQSSDGLQRDP 60
           MEP   LH+AP+F W S P TSTVASM SI+ T  FI+SS SR L R+S QSSDGLQRDP
Sbjct: 1   MEPHLHLHNAPMFGWLSFPPTSTVASMASINPTPFFISSSRSRKLNRTSDQSSDGLQRDP 60

Query: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ 120
           KKGLSRILRKDAAIRAIERKANSKKYNNLWP+AVLEALDEAIQENLWET LKIFGLLRQQ
Sbjct: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPRAVLEALDEAIQENLWETTLKIFGLLRQQ 120

Query: 121 QWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK 180
            WYEPRC+TYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK
Sbjct: 121 HWYEPRCKTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK 180

Query: 181 AISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTII 240
           AI TVDEMKS+SDCKPDVHTYSILIDCCTR RRLDLLKDILADMSYLGITCNTVTYNTII
Sbjct: 181 AIETVDEMKSISDCKPDVHTYSILIDCCTRFRRLDLLKDILADMSYLGITCNTVTYNTII 240

Query: 241 NGFGKAKMFEQMESLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300
           NGFGKAKMFEQMESLLLEMIES SCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI
Sbjct: 241 NGFGKAKMFEQMESLLLEMIESGSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300

Query: 301 EPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEE 360
           EPD WT NTMISSYGKA MYDKMVSVL+FMEKRFFSPTIVT+NTIIDVFGRAGN+++MEE
Sbjct: 301 EPDDWTYNTMISSYGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNVKRMEE 360

Query: 361 YFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVYG 420
           YF+KMK+QGMKPNSVTYCSLVNAYGK+GNIEKVDSILRQIENSDVV DTPLFNCLINVYG
Sbjct: 361 YFRKMKHQGMKPNSVTYCSLVNAYGKAGNIEKVDSILRQIENSDVVLDTPLFNCLINVYG 420

Query: 421 LAGDVRKMGELFLEMKENKCVPDSITFATMIRVLNAQGMTEAAQRLENKLIVTRDDK 476
            AGDVRKMGELFLEMKENKC+PDSITFATM+  L   GMTEAAQRLENKLIV RDDK
Sbjct: 421 QAGDVRKMGELFLEMKENKCLPDSITFATMVHALKTHGMTEAAQRLENKLIVGRDDK 477

BLAST of Lcy05g004540 vs. NCBI nr
Match: XP_022960242.1 (pentatricopeptide repeat-containing protein At3g53170 [Cucurbita moschata] >XP_022960243.1 pentatricopeptide repeat-containing protein At3g53170 [Cucurbita moschata] >XP_022960244.1 pentatricopeptide repeat-containing protein At3g53170 [Cucurbita moschata])

HSP 1 Score: 841.6 bits (2173), Expect = 3.2e-240
Identity = 427/477 (89.52%), Postives = 446/477 (93.50%), Query Frame = 0

Query: 1   MEP--RLHDAPIFRWSSIPLTSTVASMVSISSTSSFITSSYSRSLKRSSSQSSDGLQRDP 60
           MEP   LH+APIF W S P TSTVASM SI+ T  FI+SS SR L R+S QSSDGLQRDP
Sbjct: 1   MEPHLHLHNAPIFGWLSFPPTSTVASMASINPTPFFISSSRSRKLNRTSDQSSDGLQRDP 60

Query: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ 120
           KKGLSRILRKDAAIRAIERKANSKKYNNLWP+AVLEALDEAIQENLWET LKIFGLLRQQ
Sbjct: 61  KKGLSRILRKDAAIRAIERKANSKKYNNLWPRAVLEALDEAIQENLWETTLKIFGLLRQQ 120

Query: 121 QWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK 180
            WYEPRC+TYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLH+
Sbjct: 121 HWYEPRCKTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHE 180

Query: 181 AISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTII 240
           AI TVDEMKS+SDCKPDVHTYSILIDCCTR RRLDLLKDILADMSYLGITCNTVTYNTII
Sbjct: 181 AIETVDEMKSISDCKPDVHTYSILIDCCTRFRRLDLLKDILADMSYLGITCNTVTYNTII 240

Query: 241 NGFGKAKMFEQMESLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300
           NGFGKAKMFEQMESLLLEMIES SCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI
Sbjct: 241 NGFGKAKMFEQMESLLLEMIESGSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 300

Query: 301 EPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEE 360
           EPD WT NTMISSYGKA MYDKMVSVL+FMEKRFFSPTIVT+NTIIDVFGRAGN+++MEE
Sbjct: 301 EPDDWTYNTMISSYGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNVKRMEE 360

Query: 361 YFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVYG 420
           YF+KMK+QGMKPNSVTYCSLVNAYGK+GNIEKVDSILRQIENSDVV DTPLFNCLINVYG
Sbjct: 361 YFRKMKHQGMKPNSVTYCSLVNAYGKAGNIEKVDSILRQIENSDVVLDTPLFNCLINVYG 420

Query: 421 LAGDVRKMGELFLEMKENKCVPDSITFATMIRVLNAQGMTEAAQRLENKLIVTRDDK 476
            AGDVRKMGELFLEMKEN+CVPDSITFATM+  L   GMTEAAQRLENKLIV RD+K
Sbjct: 421 QAGDVRKMGELFLEMKENRCVPDSITFATMVHALKTHGMTEAAQRLENKLIVGRDNK 477

BLAST of Lcy05g004540 vs. NCBI nr
Match: XP_038898944.1 (pentatricopeptide repeat-containing protein At3g53170 isoform X2 [Benincasa hispida])

HSP 1 Score: 839.7 bits (2168), Expect = 1.2e-239
Identity = 432/478 (90.38%), Postives = 449/478 (93.93%), Query Frame = 0

Query: 1   MEPRLH--DAPIFRWSSIPLTSTVASMVSI-SSTSSFITSSYSRSLKRSSSQSSDGLQRD 60
           MEP LH  +APIF  S   LTSTV SM SI SST SFI+SS+SRSLKRSS QSSD LQRD
Sbjct: 1   MEPYLHSQNAPIFPCSPTSLTSTVISMASIRSSTPSFISSSHSRSLKRSSGQSSDALQRD 60

Query: 61  PKKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQ 120
           PKKGLSRILRKDAAI+AIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQ
Sbjct: 61  PKKGLSRILRKDAAIKAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQ 120

Query: 121 QQWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLH 180
           QQWYEPRCQTYTKLLM+L KCRQPEQASLLFQIM SEGLKPSIDVYTALVSAYG+SGLLH
Sbjct: 121 QQWYEPRCQTYTKLLMLLSKCRQPEQASLLFQIMFSEGLKPSIDVYTALVSAYGQSGLLH 180

Query: 181 KAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTI 240
           KAISTV EMKSVSDCKPDV TYSILIDCCTR RR DLLK+I ADMSYLGITCNTVTYNTI
Sbjct: 181 KAISTVVEMKSVSDCKPDVRTYSILIDCCTRHRRFDLLKEIFADMSYLGITCNTVTYNTI 240

Query: 241 INGFGKAKMFEQMESLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMG 300
           INGFGKAKMFEQMESLLLEMIESDSC PDLITFN+FIRAYGNSEQIEKMEKWYNEFQLMG
Sbjct: 241 INGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYNEFQLMG 300

Query: 301 IEPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKME 360
           IEPD+WT NTMI+SYGKAGMYDKMVSVL+FMEKRFFSPTIVT+NTIIDVFGRAGNIE+ME
Sbjct: 301 IEPDIWTYNTMITSYGKAGMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNIEEME 360

Query: 361 EYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVY 420
           EYFKKMK+QGMKPNSVT+CSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVY
Sbjct: 361 EYFKKMKFQGMKPNSVTFCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVY 420

Query: 421 GLAGDVRKMGELFLEMKENKCVPDSITFATMIRVLNAQGMTEAAQRLENKLIVTRDDK 476
           G AGDVRKMG+LFLEMKENKC PD ITFATMIR L AQGMTEAAQRLENKLIV RDD+
Sbjct: 421 GQAGDVRKMGDLFLEMKENKCEPDGITFATMIRALKAQGMTEAAQRLENKLIVGRDDE 478

BLAST of Lcy05g004540 vs. TAIR 10
Match: AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 570.9 bits (1470), Expect = 9.9e-163
Identity = 281/455 (61.76%), Postives = 352/455 (77.36%), Query Frame = 0

Query: 15  SIPLTSTVASMVSISSTSSFITSSYSRSLKRSSSQSSDGLQRDPKKGLSRILRKDAAIRA 74
           S P+       +SI+ T         R+ K +S   S   Q DPKK LSRILR DAA++ 
Sbjct: 34  SSPVYFRCIPTISITPTMCSTKVPNERTEKMNSGLISTRHQVDPKKELSRILRTDAAVKG 93

Query: 75  IERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQQWYEPRCQTYTKLLMM 134
           IERKANS+KY  LWPKAVLEALDEAI+EN W++ALKIF LLR+Q WYEPRC+TYTKL  +
Sbjct: 94  IERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKV 153

Query: 135 LGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKP 194
           LG C+QP+QASLLF++MLSEGLKP+IDVYT+L+S YG+S LL KA ST++ MKSVSDCKP
Sbjct: 154 LGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKP 213

Query: 195 DVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLL 254
           DV T+++LI CC +L R DL+K I+ +MSYLG+ C+TVTYNTII+G+GKA MFE+MES+L
Sbjct: 214 DVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVL 273

Query: 255 LEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTCNTMISSYGK 314
            +MIE    LPD+ T NS I +YGN   + KME WY+ FQLMG++PD+ T N +I S+GK
Sbjct: 274 ADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGK 333

Query: 315 AGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEEYFKKMKYQGMKPNSVT 374
           AGMY KM SV+ FMEKRFFS T VT N +I+ FG+AG IEKM++ F+KMKYQG+KPNS+T
Sbjct: 334 AGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSIT 393

Query: 375 YCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVYGLAGDVRKMGELFLEMK 434
           YCSLVNAY K+G + K+DS+LRQI NSDVV DTP FNC+IN YG AGD+  M EL+++M+
Sbjct: 394 YCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQME 453

Query: 435 ENKCVPDSITFATMIRVLNAQGMTEAAQRLENKLI 470
           E KC PD ITFATMI+   A G+ +A Q LE ++I
Sbjct: 454 ERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMI 488

BLAST of Lcy05g004540 vs. TAIR 10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 370.9 bits (951), Expect = 1.5e-102
Identity = 190/406 (46.80%), Postives = 270/406 (66.50%), Query Frame = 0

Query: 59  KKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQ 118
           +K +S ILR++A    IE+K  SKK   L P+ VLE+L E I    WE+A+++F LLR+Q
Sbjct: 87  RKAISIILRREATKSIIEKKKGSKK---LLPRTVLESLHERITALRWESAIQVFELLREQ 146

Query: 119 QWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHK 178
            WY+P    Y KL++MLGKC+QPE+A  LFQ M++EG   + +VYTALVSAY RSG    
Sbjct: 147 LWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDA 206

Query: 179 AISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTII 238
           A + ++ MKS  +C+PDVHTYSILI    ++   D ++D+L+DM   GI  NT+TYNT+I
Sbjct: 207 AFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLI 266

Query: 239 NGFGKAKMFEQMESLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGI 298
           + +GKAKMF +MES L++M+  D C PD  T NS +RA+G + QIE ME  Y +FQ  GI
Sbjct: 267 DAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGI 326

Query: 299 EPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEE 358
           EP++ T N ++ SYGK+G Y KM +V+ +M+K  +S TIVT N +ID FGRAG++++ME 
Sbjct: 327 EPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEY 386

Query: 359 YFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVYG 418
            F+ M+ + + P+ VT CSLV AYG++   +K+  +LR IENSD+  D   FNCL++ YG
Sbjct: 387 LFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYG 446

Query: 419 LAGDVRKMGELFLEMKENKCVPDSITFATMIRVLNAQGMTEAAQRL 465
                 +M  +   M++    PD IT+ TM++     GMT   + L
Sbjct: 447 RMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489

BLAST of Lcy05g004540 vs. TAIR 10
Match: AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 313.2 bits (801), Expect = 3.7e-85
Identity = 156/396 (39.39%), Postives = 240/396 (60.61%), Query Frame = 0

Query: 72  IRAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQQWYEPRCQTYTKL 131
           I+ +++K + +   N W   V E L + I +  W  AL++F +LR+Q +Y+P+  TY KL
Sbjct: 71  IKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKL 130

Query: 132 LMMLGKCRQPEQASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSD 191
           L++LGK  QP +A  LF  ML EGL+P++++YTAL++AY RS L+  A S +D+MKS   
Sbjct: 131 LVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQ 190

Query: 192 CKPDVHTYSILIDCCTRLRRLDLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQME 251
           C+PDV TYS L+  C    + DL+  +  +M    IT NTVT N +++G+G+   F+QME
Sbjct: 191 CQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQME 250

Query: 252 SLLLEMIESDSCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTCNTMISS 311
            +L +M+ S +C PD+ T N  +  +GN  +I+ ME WY +F+  GIEP+  T N +I S
Sbjct: 251 KVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGS 310

Query: 312 YGKAGMYDKMVSVLSFMEKRFFSPTIVTINTIIDVFGRAGNIEKMEEYFKKMKYQGMKPN 371
           YGK  MYDKM SV+ +M K  F  T  T N II+ F   G+ + ME  F +M+ +GMK +
Sbjct: 311 YGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKAD 370

Query: 372 SVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVPDTPLFNCLINVYGLAGDVRKMGELFL 431
           + T+C L+N Y  +G   KV S ++     ++  +T  +N +I+    A D+ +M  +++
Sbjct: 371 TKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYI 430

Query: 432 EMKENKCVPDSITFATMIRVLNAQGMTEAAQRLENK 468
            MKE +CV DS TF  M+     +GM +    LE +
Sbjct: 431 RMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQE 466

BLAST of Lcy05g004540 vs. TAIR 10
Match: AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 176.8 bits (447), Expect = 4.1e-44
Identity = 100/363 (27.55%), Postives = 187/363 (51.52%), Query Frame = 0

Query: 97  DEAIQENLWETALKIFGLLRQQQWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGL 156
           +E  + + W   L++F  +++Q+WY P    Y+KL+ ++GK  Q   A  LF  M + G 
Sbjct: 105 EELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGC 164

Query: 157 KPSIDVYTALVSAY----GRSGLLHKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRL 216
           +P   VY AL++A+     ++  L K    +D+MK +  C+P+V TY+IL+    +  ++
Sbjct: 165 RPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKV 224

Query: 217 DLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCLPDLITFNS 276
           D +  +  D+    ++ +  T+N +++ +GK  M ++ME++L  M  S+ C PD+ITFN 
Sbjct: 225 DQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNV 284

Query: 277 FIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRF 336
            I +YG  ++ EKME+ +        +P + T N+MI +YGKA M DK   V   M    
Sbjct: 285 LIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMN 344

Query: 337 FSPTIVTINTIIDVFGRAGNIEKMEEYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVD 396
           + P+ +T   +I ++G  G++ +  E F+++        + T  +++  Y ++G   + D
Sbjct: 345 YIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEAD 404

Query: 397 SILRQIENSDVVPDTPLFNCLINVYGLAGDVRKMGELFLEMKENKCVPDSITFATMIRVL 456
            +        V PD   +  L   Y  A    ++  L  +M+++  VP+   F   + V 
Sbjct: 405 KLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVF 464

BLAST of Lcy05g004540 vs. TAIR 10
Match: AT4G39620.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 176.8 bits (447), Expect = 4.1e-44
Identity = 100/363 (27.55%), Postives = 187/363 (51.52%), Query Frame = 0

Query: 97  DEAIQENLWETALKIFGLLRQQQWYEPRCQTYTKLLMMLGKCRQPEQASLLFQIMLSEGL 156
           +E  + + W   L++F  +++Q+WY P    Y+KL+ ++GK  Q   A  LF  M + G 
Sbjct: 105 EELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGC 164

Query: 157 KPSIDVYTALVSAY----GRSGLLHKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRL 216
           +P   VY AL++A+     ++  L K    +D+MK +  C+P+V TY+IL+    +  ++
Sbjct: 165 RPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKV 224

Query: 217 DLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCLPDLITFNS 276
           D +  +  D+    ++ +  T+N +++ +GK  M ++ME++L  M  S+ C PD+ITFN 
Sbjct: 225 DQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNV 284

Query: 277 FIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTCNTMISSYGKAGMYDKMVSVLSFMEKRF 336
            I +YG  ++ EKME+ +        +P + T N+MI +YGKA M DK   V   M    
Sbjct: 285 LIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMN 344

Query: 337 FSPTIVTINTIIDVFGRAGNIEKMEEYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVD 396
           + P+ +T   +I ++G  G++ +  E F+++        + T  +++  Y ++G   + D
Sbjct: 345 YIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEAD 404

Query: 397 SILRQIENSDVVPDTPLFNCLINVYGLAGDVRKMGELFLEMKENKCVPDSITFATMIRVL 456
            +        V PD   +  L   Y  A    ++  L  +M+++  VP+   F   + V 
Sbjct: 405 KLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVF 464

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SCP41.3e-16264.34Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX... [more]
Q9FKC32.1e-10146.80Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... [more]
Q9SQU65.2e-8439.39Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop... [more]
Q9SV965.8e-4327.55Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop... [more]
Q9LYZ91.7e-4226.04Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1HAD91.6e-24089.52pentatricopeptide repeat-containing protein At3g53170 OS=Cucurbita moschata OX=3... [more]
A0A1S3CEG41.0e-23989.52pentatricopeptide repeat-containing protein At3g53170 isoform X1 OS=Cucumis melo... [more]
A0A1S3CFP91.7e-23989.68pentatricopeptide repeat-containing protein At3g53170 isoform X2 OS=Cucumis melo... [more]
A0A0A0K9Q14.4e-23588.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426480 PE=4 SV=1[more]
A0A6J1KQP73.5e-23291.35pentatricopeptide repeat-containing protein At3g53170 OS=Cucurbita maxima OX=366... [more]
Match NameE-valueIdentityDescription
KAG7025638.13.8e-24189.94Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023515060.13.8e-24189.94pentatricopeptide repeat-containing protein At3g53170 [Cucurbita pepo subsp. pep... [more]
KAG6593286.16.5e-24189.73Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022960242.13.2e-24089.52pentatricopeptide repeat-containing protein At3g53170 [Cucurbita moschata] >XP_0... [more]
XP_038898944.11.2e-23990.38pentatricopeptide repeat-containing protein At3g53170 isoform X2 [Benincasa hisp... [more]
Match NameE-valueIdentityDescription
AT3G53170.19.9e-16361.76Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G48730.11.5e-10246.80Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G06430.13.7e-8539.39Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G39620.14.1e-4427.55Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G39620.24.1e-4427.55Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 225..329
e-value: 1.3E-25
score: 92.0
coord: 400..469
e-value: 2.1E-14
score: 55.5
coord: 330..399
e-value: 8.3E-19
score: 69.8
coord: 40..224
e-value: 5.2E-36
score: 126.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 335..383
e-value: 1.5E-11
score: 44.3
coord: 230..277
e-value: 8.1E-10
score: 38.8
coord: 405..451
e-value: 1.8E-9
score: 37.7
coord: 158..206
e-value: 2.9E-11
score: 43.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 162..196
e-value: 1.4E-6
score: 26.1
coord: 410..442
e-value: 2.8E-8
score: 31.4
coord: 127..159
e-value: 9.0E-4
score: 17.3
coord: 338..371
e-value: 3.2E-8
score: 31.2
coord: 268..302
e-value: 7.7E-7
score: 26.9
coord: 197..226
e-value: 0.0015
score: 16.6
coord: 232..266
e-value: 5.1E-9
score: 33.8
coord: 304..336
e-value: 3.1E-8
score: 31.3
coord: 373..407
e-value: 1.5E-7
score: 29.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 304..331
e-value: 5.9E-6
score: 26.2
coord: 127..156
e-value: 0.043
score: 14.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 124..158
score: 9.371969
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 230..264
score: 10.347525
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 406..440
score: 10.369448
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 195..229
score: 8.911594
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 336..370
score: 11.246351
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 159..189
score: 8.53891
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 301..335
score: 10.98328
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 266..300
score: 10.314641
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 371..405
score: 11.081932
NoneNo IPR availablePANTHERPTHR47933:SF35OS03G0115300 PROTEINcoord: 17..473
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 17..473

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g004540.1Lcy05g004540.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding