Lcy05g004450 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g004450
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein TAB2 homolog, chloroplastic
Location	Chr05: 3948254 .. 3950578 (+)
RNA-Seq Expression	Lcy05g004450
Synteny	Lcy05g004450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCAACAAGACACAGATTCCCAGAAACGATATTTTGTGGCGGAAAAATAACTAACAAAACTGGCTCTCTCACAAAGCTTATCTTACTGAGAGAGCTCCACTTCCATGGCGACCTTGAGCTTCAACCCCACCAGAATAAGAACCCCAGGAGTGCTTCACCTTCGCAAATCCAGACCCAGTTCGTCGCCATTTTCACAACCGATCAAAACCGCGAACAGATTCTCAGCCAATTGCCGTATCAATCAACAACAACTACATCGTTTCCGATCGAATTCTGTATCGGAAAGCTCGGTTTCGGTGCCGGAAGAGGTGGAAGTGGACGAAGAAGAGGATGATCCGACCTTGGAGTTGGCCTATTTGGATCCGGAAACAGATCCTGAGAGCATTACGGAGTGGGAGCTGGATTTCTGCTCGAGACCGATTTTGGATATCAGAGGGAAGAAGGTGTGGGAGCTTGTAGCGTGTGATAATTCGCTCTCGCTTCAGTACACGAAGTATTTTCCTAACAATGTTATTAATAGCATTACTTTGAGAGACGCGATTTCGTCGATTACTGAAGAGTTGGGGGTGCCATTACCAGAGAAAATCCGCTTCTTCAGGTACATTTTCTGATTGATTGAGCTAATTTGGATGGATATGGTACCATACAATGTTGCGTTTATGCATTTGAACTTCAAATGTGTATGAAATTGTGGAGAAAGTCTCCTATGATTAAGTAGTTTTAGCAATTTGTTAAAGAATGGTGTCTCTGTCTTCATATGATCGACATGTTGATGGAATTATAGGTCACAGATGCAGACAATCATTACAAAAGCATGTACCGAGCTTGGCATAAAGCCCATTCCTAGTAAAAGGGTTTGTAGTTATGATTTTATAGGTGTTTTCTTTGATTCTGTTTCTTAGTGAAGTTGATTGGATTTAGATTATGGATTAGACTCTCTGTGCTCAAGAGTTTCCATTGTCCTACCAGTGTCTTTCCCTGCTTTTGTGGCTGGAAGAGCGATACGAGACCGTTTACACGCGTCATCCAGGTTTTCAGAAAGGATCTAAACCCCTCCTTGCATTAGATAATCCATTTCCAATGGAGCTTCCCGAGAATCTTTTTGGGGAGAGGTGGGCATTTGTCCAATTGCCTTTTTCAGGTATACCATTAGTTTTCCTTCTTTGTTTCGTGTGAACTCTAAACATGGCTGAAGAGTTGCTGCTTTACCAAGGGATGTTGCTTTGTTTTTCTTATAGTCTCTTCAGTAATAATTTGGTCTGCCATTGATTCTCAGCTGTTCAAGAGGAGGTCTCAAACTTAAAGGCAAGTTTTATGTTTGGTTCCAGTCTCGATCTGGATTTACTGGGAATCGAAATTGATGATAAGACGATGATCCCAGGGTTGTCGGTTGCATCTTCACGAGCTCAACCATTGGCAGGTATGGTATACCGCCACTTAATAATCAGTCAGAGTTATTGTGCTTTCGAACATATACAAACAAATGATTCACAACAAACTCCTTACTCTTTCTAATTTCGATCTTCTGAGTCAACTAAATTGTTCTTCCCAAAGATTTTATATGCCTATCATCATACGATAAATAATCCTATAAATCATGTCATCCATCACGAAGATTTTGTAATGTAAGAAATTTCAATTTGTTGTTTCATACATGTTCCCAAAACAATACTTTGCAATATGATATAAACAATCTGCCATTCGATCTCTTTTTCTGTATTCCACAGCTTGGATGAATGGAATGGAAGTATATTCAGTCGAAGCCGATACATCTCGCGCTTGTTTGATTCTATCCGTTGGGATCTCAACTCGATATGTCTATGCTACCTATAAAAAAACTCCAGTGACAACTGCCGAAGCTGAAGCTTGGGAAGCAGCAAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATACAAGACGACTTGGATTCAGAGGACTGTGTTGGATTCTGGCTCCTGCTAGACTTGCCGCCACCACCAGTATAGACAGTGAAGTAGATTTAAAAAAATTTCACTTTAAGAAGGTAGGTAGTCTTATAAAGCATGTTAAATTTTGTAACTTCATTTTTTCTTGGTTGTACAAACCAATGCATAATACAGGATATGGTTTCCTTTTGTGAGATGGGACTGATGAGCAAAGTTTTTTTTATGAGCACTGAGCTCCAACCAAGTATGGGAAATGAACTTAAACTTGGAATGCATTTTAGACACTACAAAACTTGTATATCTCCAAATCCATATTTAGAGACCTACAGAGACAAGTGAATCCCTTTCTGTTGCCCAGAAGTTTCAAAATCTATTTTATGTCACTACTGCTTCTGAT

mRNA sequence

GCCCAACAAGACACAGATTCCCAGAAACGATATTTTGTGGCGGAAAAATAACTAACAAAACTGGCTCTCTCACAAAGCTTATCTTACTGAGAGAGCTCCACTTCCATGGCGACCTTGAGCTTCAACCCCACCAGAATAAGAACCCCAGGAGTGCTTCACCTTCGCAAATCCAGACCCAGTTCGTCGCCATTTTCACAACCGATCAAAACCGCGAACAGATTCTCAGCCAATTGCCGTATCAATCAACAACAACTACATCGTTTCCGATCGAATTCTGTATCGGAAAGCTCGGTTTCGGTGCCGGAAGAGGTGGAAGTGGACGAAGAAGAGGATGATCCGACCTTGGAGTTGGCCTATTTGGATCCGGAAACAGATCCTGAGAGCATTACGGAGTGGGAGCTGGATTTCTGCTCGAGACCGATTTTGGATATCAGAGGGAAGAAGGTGTGGGAGCTTGTAGCGTGTGATAATTCGCTCTCGCTTCAGTACACGAAGTATTTTCCTAACAATGTTATTAATAGCATTACTTTGAGAGACGCGATTTCGTCGATTACTGAAGAGTTGGGGGTGCCATTACCAGAGAAAATCCGCTTCTTCAGGTCACAGATGCAGACAATCATTACAAAAGCATGTACCGAGCTTGGCATAAAGCCCATTCCTAGTAAAAGGTGTCTTTCCCTGCTTTTGTGGCTGGAAGAGCGATACGAGACCGTTTACACGCGTCATCCAGGTTTTCAGAAAGGATCTAAACCCCTCCTTGCATTAGATAATCCATTTCCAATGGAGCTTCCCGAGAATCTTTTTGGGGAGAGGTGGGCATTTGTCCAATTGCCTTTTTCAGCTGTTCAAGAGGAGGTCTCAAACTTAAAGGCAAGTTTTATGTTTGGTTCCAGTCTCGATCTGGATTTACTGGGAATCGAAATTGATGATAAGACGATGATCCCAGGGTTGTCGGTTGCATCTTCACGAGCTCAACCATTGGCAGCTTGGATGAATGGAATGGAAGTATATTCAGTCGAAGCCGATACATCTCGCGCTTGTTTGATTCTATCCGTTGGGATCTCAACTCGATATGTCTATGCTACCTATAAAAAAACTCCAGTGACAACTGCCGAAGCTGAAGCTTGGGAAGCAGCAAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATACAAGACGACTTGGATTCAGAGGACTGTGTTGGATTCTGGCTCCTGCTAGACTTGCCGCCACCACCAGTATAGACAGTGAAGTAGATTTAAAAAAATTTCACTTTAAGAAGGTAGGTAGTCTTATAAAGCATGTTAAATTTTGTAACTTCATTTTTTCTTGGTTGTACAAACCAATGCATAATACAGGATATGGTTTCCTTTTGTGAGATGGGACTGATGAGCAAAGTTTTTTTTATGAGCACTGAGCTCCAACCAAGTATGGGAAATGAACTTAAACTTGGAATGCATTTTAGACACTACAAAACTTGTATATCTCCAAATCCATATTTAGAGACCTACAGAGACAAGTGAATCCCTTTCTGTTGCCCAGAAGTTTCAAAATCTATTTTATGTCACTACTGCTTCTGAT

Coding sequence (CDS)

ATGGCGACCTTGAGCTTCAACCCCACCAGAATAAGAACCCCAGGAGTGCTTCACCTTCGCAAATCCAGACCCAGTTCGTCGCCATTTTCACAACCGATCAAAACCGCGAACAGATTCTCAGCCAATTGCCGTATCAATCAACAACAACTACATCGTTTCCGATCGAATTCTGTATCGGAAAGCTCGGTTTCGGTGCCGGAAGAGGTGGAAGTGGACGAAGAAGAGGATGATCCGACCTTGGAGTTGGCCTATTTGGATCCGGAAACAGATCCTGAGAGCATTACGGAGTGGGAGCTGGATTTCTGCTCGAGACCGATTTTGGATATCAGAGGGAAGAAGGTGTGGGAGCTTGTAGCGTGTGATAATTCGCTCTCGCTTCAGTACACGAAGTATTTTCCTAACAATGTTATTAATAGCATTACTTTGAGAGACGCGATTTCGTCGATTACTGAAGAGTTGGGGGTGCCATTACCAGAGAAAATCCGCTTCTTCAGGTCACAGATGCAGACAATCATTACAAAAGCATGTACCGAGCTTGGCATAAAGCCCATTCCTAGTAAAAGGTGTCTTTCCCTGCTTTTGTGGCTGGAAGAGCGATACGAGACCGTTTACACGCGTCATCCAGGTTTTCAGAAAGGATCTAAACCCCTCCTTGCATTAGATAATCCATTTCCAATGGAGCTTCCCGAGAATCTTTTTGGGGAGAGGTGGGCATTTGTCCAATTGCCTTTTTCAGCTGTTCAAGAGGAGGTCTCAAACTTAAAGGCAAGTTTTATGTTTGGTTCCAGTCTCGATCTGGATTTACTGGGAATCGAAATTGATGATAAGACGATGATCCCAGGGTTGTCGGTTGCATCTTCACGAGCTCAACCATTGGCAGCTTGGATGAATGGAATGGAAGTATATTCAGTCGAAGCCGATACATCTCGCGCTTGTTTGATTCTATCCGTTGGGATCTCAACTCGATATGTCTATGCTACCTATAAAAAAACTCCAGTGACAACTGCCGAAGCTGAAGCTTGGGAAGCAGCAAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATACAAGACGACTTGGATTCAGAGGACTGTGTTGGATTCTGGCTCCTGCTAGACTTGCCGCCACCACCAGTATAG

Protein sequence

MATLSFNPTRIRTPGVLHLRKSRPSSSPFSQPIKTANRFSANCRINQQQLHRFRSNSVSESSVSVPEEVEVDEEEDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

Homology

[Close]

BLAST of Lcy05g004450 vs. ExPASy Swiss-Prot
Match: Q9SFB3 (Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATAB2 PE=2 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 3.6e-160
Identity = 280/381 (73.49%), Postives = 326/381 (85.56%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGVLHLRKSRPSSSPFSQPIKTANRFSANCRINQQQLHRFRSNSVSE 60
           MATL FN  RI+TP +  +    P  S F++PIKT + FS+   + +    RF S S+ E
Sbjct: 1   MATLGFNTRRIQTPSLPRI----PKPSSFTKPIKTHHLFSSETLLKR---CRFVSRSLPE 60

Query: 61  SSVSVPEEVEV--DEEEDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SS+S+ +E EV  + EEDDPT EL+YLDPE+D +SI EWELDFCSRPILD RGKK+WELV
Sbjct: 61  SSLSITKEQEVANEVEEDDPTSELSYLDPESDADSIKEWELDFCSRPILDSRGKKIWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
            CD SLSLQ TKYFPNNVINSITL+DAI +IT++LGVPLPEKIRFFRSQMQTIITKAC E
Sbjct: 121 VCDASLSLQVTKYFPNNVINSITLKDAIVTITQDLGVPLPEKIRFFRSQMQTIITKACKE 180

Query: 181 LGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWA 240
           L IK +PSKRCLSL LWL+ERY+TVYTRHPGFQKGS PLL+LDNPFPM LPENLFGE+WA
Sbjct: 181 LAIKAVPSKRCLSLFLWLQERYDTVYTRHPGFQKGSLPLLSLDNPFPMNLPENLFGEKWA 240

Query: 241 FVQLPFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWMNG 300
           FVQLP+SAV+EE+S+    F+FG+SLDLDLLGIE+D+ T+IPGLSVA+SRA+PLAAWMNG
Sbjct: 241 FVQLPYSAVREEISDFDEKFVFGASLDLDLLGIEVDENTLIPGLSVATSRAKPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           +EV S+EAD+S+ CLILSVGI+TRYVYATYKKTPVTT EAEAWE+AKK  GGLHFLAIQD
Sbjct: 301 LEVCSIEADSSKGCLILSVGIATRYVYATYKKTPVTTDEAEAWESAKKTSGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 380
           DLDS+DCVGFWLL+DLPPPPV
Sbjct: 361 DLDSDDCVGFWLLIDLPPPPV 374

[Close]

BLAST of Lcy05g004450 vs. ExPASy Swiss-Prot
Match: B4FTR7 (Protein TAB2 homolog, chloroplastic OS=Zea mays OX=4577 GN=TAB2 PE=2 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 2.9e-138
Identity = 240/379 (63.32%), Postives = 299/379 (78.89%), Query Frame = 0


Query: 17  LHLRKSRPSSSP----------FSQPIKTANRFSANCRINQQQLHRFRSNSVSESSVSVP 76
           L LR+S P  +P           ++P+  A R       + +   R RS S SESS    
Sbjct: 13  LALRRSLPLPNPPGRATTSVSLSARPVTPARRMIVPASPSPRSPRRCRSIS-SESSTEAS 72

Query: 77  EEVEVDEEE------DDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELVAC 136
              ++ +EE       DP  E+ YLDP+ DPESI EWELDFCSRPILD RGKKVWELV C
Sbjct: 73  AAADIADEEVEAENKVDPQAEVCYLDPDVDPESIREWELDFCSRPILDARGKKVWELVVC 132

Query: 137 DNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELG 196
           D +LSLQ+T+YFPNN INS+TLRDA++S++E LGVP+P+++RFFRSQMQTIIT+AC +LG
Sbjct: 133 DATLSLQFTRYFPNNAINSVTLRDALASVSEALGVPMPDRVRFFRSQMQTIITRACGDLG 192

Query: 197 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 256
           +K +PS+RC+SLLLWLEERYE VY+RHPGFQ G++PLLALDNPFP  LPENLFG++WAFV
Sbjct: 193 VKAVPSRRCVSLLLWLEERYEVVYSRHPGFQAGTRPLLALDNPFPTTLPENLFGDKWAFV 252

Query: 257 QLPFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWMNGME 316
           QLPFSAV+EEV +L+  + FG+ LDL+LLG E+DD T++PG++V SSRA+PLAAWMNG+E
Sbjct: 253 QLPFSAVREEVESLERRYAFGAGLDLELLGFELDDTTLVPGVAVESSRAKPLAAWMNGLE 312

Query: 317 VYSVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL 376
           + ++EADT RA LILS G+STRYVY+ Y+KT  +T EAEAWEAAKKACGGLHFLAIQ++L
Sbjct: 313 ICAMEADTGRASLILSAGVSTRYVYSGYQKTAASTQEAEAWEAAKKACGGLHFLAIQENL 372

Query: 377 DSEDCVGFWLLLDLPPPPV 380
           +S+ CVGFWLLLDLPPPPV
Sbjct: 373 NSDGCVGFWLLLDLPPPPV 390

[Close]

BLAST of Lcy05g004450 vs. ExPASy Swiss-Prot
Match: Q6K9C1 (Protein TAB2 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0610800 PE=2 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 1.4e-135
Identity = 245/377 (64.99%), Postives = 293/377 (77.72%), Query Frame = 0


Query: 17  LHLRKSRPSSSPFS----QPIKTANRFSANCRINQQQLHRFRSNSVSESSVSV------- 76
           LHL  S+PS + FS     P     R          +  R RS S SESS +        
Sbjct: 19  LHL--SKPSCATFSARALPPAAHCCRTVVAAAAPSSRTCRCRSVS-SESSTAAAADTADD 78

Query: 77  PEEV---EVDEEEDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELVACDN 136
            EEV   + +EEE DP  E+ YLDPE D E I EWELDFCSRPILD RGKKVWELV CD 
Sbjct: 79  EEEVTKSDSEEEEMDPLAEVCYLDPEADAEGIREWELDFCSRPILDARGKKVWELVVCDA 138

Query: 137 SLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIK 196
           +LSLQ+T++FPN  INS+TLRDA++S+   LGVPLP++ RFFRSQMQTII++AC ELG+K
Sbjct: 139 TLSLQFTRFFPNTSINSVTLRDALASVATSLGVPLPDRARFFRSQMQTIISRACNELGVK 198

Query: 197 PIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQL 256
            +PS+RC+SLLLWLEERYETVY+RHPGFQ G+KPLL LDNPFP  LPENLFG++WAFVQL
Sbjct: 199 AVPSRRCVSLLLWLEERYETVYSRHPGFQSGTKPLLTLDNPFPTSLPENLFGDKWAFVQL 258

Query: 257 PFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWMNGMEVY 316
           PFSAV+EEV +L+  + FG+ LDLDLLG E+D+ T+IPG++V SSRA+PLAAWMNG+E+ 
Sbjct: 259 PFSAVREEVESLERRYAFGAGLDLDLLGFELDENTLIPGVAVESSRAKPLAAWMNGLEIC 318

Query: 317 SVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDS 376
           S+E DT RA LILS G+STRYVYA Y+K+  TT EAEAWEAAKKACGGLHFLAIQ++L+S
Sbjct: 319 SMEVDTGRANLILSAGVSTRYVYAGYQKSAATTQEAEAWEAAKKACGGLHFLAIQENLNS 378

Query: 377 EDCVGFWLLLDLPPPPV 380
           + CVGFWLLLDLPPPPV
Sbjct: 379 DGCVGFWLLLDLPPPPV 392

[Close]

BLAST of Lcy05g004450 vs. ExPASy TrEMBL
Match: A0A6J1KWL7 (protein TAB2 homolog, chloroplastic isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111497827 PE=4 SV=1)

HSP 1 Score: 712.6 bits (1838), Expect = 8.7e-202
Identity = 358/381 (93.96%), Postives = 365/381 (95.80%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGVLHLRKSRPSSSPFSQPIKTANRFSANCRINQQQLHRFRSNSVSE 60
           MATLSFNPTRIRTPG LHL K +P S PF Q IKTA RFSA+ RINQQ LHRFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSVSVPEEVE--VDEEEDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SS+SVPEEVE  VDE+EDDPTLELAYLD ETDPESITEWELDFCSRPILDIRGKKVWELV
Sbjct: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
           ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE
Sbjct: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180

Query: 181 LGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWA 240
           LG+KPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELP+NLFGERWA
Sbjct: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240

Query: 241 FVQLPFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWMNG 300
           FVQLPFSAVQEEVSNL ASFMFGSSLDLDLLGIEIDD +MIPGLSVASSRAQPLAAWMNG
Sbjct: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSVASSRAQPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           MEVYSVEADTSRACLILSVGISTRYVYATYKK PVTTAEAEAWEAAKKACGGLHFLAIQD
Sbjct: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 380
           DLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 DLDSEDCVGFWLLLDLPPPPV 381

[Close]

BLAST of Lcy05g004450 vs. ExPASy TrEMBL
Match: A0A6J1CU88 (protein TAB2 homolog, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014623 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 1.1e-201
Identity = 357/379 (94.20%), Postives = 364/379 (96.04%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGVLHLRKSRPSSSPFSQPIKTANRFSANCRINQQQLHRFRSNSVSE 60
           MATLSFNP RIRTP  LH+RK  PSSSP SQPIKTANRF  NCRINQQQL RF SNSVSE
Sbjct: 1   MATLSFNPARIRTP-ALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSE 60

Query: 61  SSVSVPEEVEVDEEEDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELVAC 120
           SSVS PEEVEVDEEEDDPTLELAYLDP+TD ESITEWELDFCSRPILDIRGKKVWELVAC
Sbjct: 61  SSVSAPEEVEVDEEEDDPTLELAYLDPDTDTESITEWELDFCSRPILDIRGKKVWELVAC 120

Query: 121 DNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELG 180
           DNSLSLQYTKYFPNNVINSITLRDAI+SI+EELGVPLPEKIRFFRSQMQTIITKACTELG
Sbjct: 121 DNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELG 180

Query: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240
           IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV
Sbjct: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240

Query: 241 QLPFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWMNGME 300
           QLPFS VQEEVSNLKA+FMFGSSLDLDLLGIEID+KTMIPGLSVASSRAQPLAAWMNGME
Sbjct: 241 QLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME 300

Query: 301 VYSVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL 360
           VYSVEADTSR+ LILSVGISTRYVYATYKKTPV TAEAEAWEAAKKACGGLHFLAIQDDL
Sbjct: 301 VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDL 360

Query: 361 DSEDCVGFWLLLDLPPPPV 380
           DSEDCVGFWLLLDLPPPPV
Sbjct: 361 DSEDCVGFWLLLDLPPPPV 378

[Close]

BLAST of Lcy05g004450 vs. ExPASy TrEMBL
Match: A0A6J1H921 (protein TAB2 homolog, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111460742 PE=4 SV=1)

HSP 1 Score: 711.1 bits (1834), Expect = 2.5e-201
Identity = 358/381 (93.96%), Postives = 364/381 (95.54%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGVLHLRKSRPSSSPFSQPIKTANRFSANCRINQQQLHRFRSNSVSE 60
           MATLSFNPTRIRTPG LHL K +P S PFSQ IKT  RFSA+ RINQQ L RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60

Query: 61  SSVSVPEEVE--VDEEEDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SS+SVPEEVE  VDE+EDDPTLELAYLD ETDPESITEWELDFCSRPILDIRGKKVWELV
Sbjct: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
           ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE
Sbjct: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180

Query: 181 LGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWA 240
           LG+KPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELP+NLFGERWA
Sbjct: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240

Query: 241 FVQLPFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWMNG 300
           FVQLPFSAVQEEVSNL ASFMFGSSLDLDLLGIEIDD TMIPGLSVASSRAQPLAAWMNG
Sbjct: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           MEVYSVEADTSRACLILSVGISTRYVYATYKK PVTTAEAEAWEAAKKACGGLHFLAIQD
Sbjct: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 380
           DLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 DLDSEDCVGFWLLLDLPPPPV 381

[Close]

BLAST of Lcy05g004450 vs. ExPASy TrEMBL
Match: A0A6J1KZX3 (protein TAB2 homolog, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497827 PE=4 SV=1)

HSP 1 Score: 710.7 bits (1833), Expect = 3.3e-201
Identity = 358/383 (93.47%), Postives = 364/383 (95.04%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGVLHLRKSRPSSSPFSQPIKTANRFSANCRINQQQLHRFRSNSVSE 60
           MATLSFNPTRIRTPG LHL K +P S PF Q IKTA RFSA+ RINQQ LHRFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSVSVPEEVEV----DEEEDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWE 120
           SS+SVPEEVEV    DE EDDPTLELAYLD ETDPESITEWELDFCSRPILDIRGKKVWE
Sbjct: 61  SSISVPEEVEVAVDEDEAEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWE 120

Query: 121 LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC 180
           LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC
Sbjct: 121 LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC 180

Query: 181 TELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGER 240
           TELG+KPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELP+NLFGER
Sbjct: 181 TELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGER 240

Query: 241 WAFVQLPFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWM 300
           WAFVQLPFSAVQEEVSNL ASFMFGSSLDLDLLGIEIDD +MIPGLSVASSRAQPLAAWM
Sbjct: 241 WAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSVASSRAQPLAAWM 300

Query: 301 NGMEVYSVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAI 360
           NGMEVYSVEADTSRACLILSVGISTRYVYATYKK PVTTAEAEAWEAAKKACGGLHFLAI
Sbjct: 301 NGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAI 360

Query: 361 QDDLDSEDCVGFWLLLDLPPPPV 380
           QDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 QDDLDSEDCVGFWLLLDLPPPPV 383

[Close]

BLAST of Lcy05g004450 vs. ExPASy TrEMBL
Match: A0A5A7UYM5 (DUF1092 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00880 PE=4 SV=1)

HSP 1 Score: 708.0 bits (1826), Expect = 2.1e-200
Identity = 353/379 (93.14%), Postives = 365/379 (96.31%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGVLHLRKSRPSSSPFSQPIKTANRFSANCRINQQQLHRFRSNSVSE 60
           MATLSFNPTRIRT   LH  KS+P SSPFSQ IKTANRFSAN RI+QQ L RF+SNSVSE
Sbjct: 1   MATLSFNPTRIRTLVGLHFTKSKPISSPFSQSIKTANRFSANGRISQQPLRRFQSNSVSE 60

Query: 61  SSVSVPEEVEVDEEEDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELVAC 120
           SSVSVPEEVE++E+EDDPTLE+AYLD ETDPESITEWELDFCSRPILDIRGKKVWELV C
Sbjct: 61  SSVSVPEEVELNEDEDDPTLEMAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVVC 120

Query: 121 DNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELG 180
           DNSLSLQYTKYFPNNVINSITLRDAISSI EELGVPLPEKIRFFRSQMQTIITKACTELG
Sbjct: 121 DNSLSLQYTKYFPNNVINSITLRDAISSIAEELGVPLPEKIRFFRSQMQTIITKACTELG 180

Query: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240
           IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV
Sbjct: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240

Query: 241 QLPFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWMNGME 300
           QLPFSAVQEE+SNLK +FMFGSSLDLDLLGI+IDDKTMIPGLSVA+SRAQPLAAWMNGME
Sbjct: 241 QLPFSAVQEEISNLKETFMFGSSLDLDLLGIDIDDKTMIPGLSVATSRAQPLAAWMNGME 300

Query: 301 VYSVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL 360
           VYSVEADTSRACLILSVGI+TRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL
Sbjct: 301 VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL 360

Query: 361 DSEDCVGFWLLLDLPPPPV 380
           DSEDCVGFWLLLDLPPPPV
Sbjct: 361 DSEDCVGFWLLLDLPPPPV 379

[Close]

BLAST of Lcy05g004450 vs. NCBI nr
Match: XP_038900264.1 (protein TAB2 homolog, chloroplastic [Benincasa hispida])

HSP 1 Score: 713.0 bits (1839), Expect = 1.4e-201
Identity = 356/379 (93.93%), Postives = 366/379 (96.57%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGVLHLRKSRPSSSPFSQPIKTANRFSANCRINQQQLHRFRSNSVSE 60
           MATLSFNPTRIRT G LH  KS+PSSSPFSQ IKT NRFSA+ RINQQ L RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTLGGLHFSKSKPSSSPFSQSIKTVNRFSASGRINQQPLRRFRSNSVSE 60

Query: 61  SSVSVPEEVEVDEEEDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELVAC 120
           SSVS PEEVE++E+EDDPTLELAYLD  TDPESITEWELDFCSRPILDIRGKKVWELVAC
Sbjct: 61  SSVSAPEEVELNEDEDDPTLELAYLDAATDPESITEWELDFCSRPILDIRGKKVWELVAC 120

Query: 121 DNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELG 180
           DNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELG
Sbjct: 121 DNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELG 180

Query: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240
           IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGE+WAFV
Sbjct: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAFV 240

Query: 241 QLPFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWMNGME 300
           QLPFSAVQEEVSNLK +FMFGSSLDLDLLGIEID+KTMIPGLSVA+SRAQPLAAWMNGME
Sbjct: 241 QLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDEKTMIPGLSVATSRAQPLAAWMNGME 300

Query: 301 VYSVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL 360
           VYSVEADTSRACLILSVGI+TRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL
Sbjct: 301 VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL 360

Query: 361 DSEDCVGFWLLLDLPPPPV 380
           DSEDCVGFWLLLDLPPPPV
Sbjct: 361 DSEDCVGFWLLLDLPPPPV 379

[Close]

BLAST of Lcy05g004450 vs. NCBI nr
Match: XP_023004564.1 (protein TAB2 homolog, chloroplastic isoform X3 [Cucurbita maxima])

HSP 1 Score: 712.6 bits (1838), Expect = 1.8e-201
Identity = 358/381 (93.96%), Postives = 365/381 (95.80%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGVLHLRKSRPSSSPFSQPIKTANRFSANCRINQQQLHRFRSNSVSE 60
           MATLSFNPTRIRTPG LHL K +P S PF Q IKTA RFSA+ RINQQ LHRFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSVSVPEEVE--VDEEEDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SS+SVPEEVE  VDE+EDDPTLELAYLD ETDPESITEWELDFCSRPILDIRGKKVWELV
Sbjct: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
           ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE
Sbjct: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180

Query: 181 LGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWA 240
           LG+KPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELP+NLFGERWA
Sbjct: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240

Query: 241 FVQLPFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWMNG 300
           FVQLPFSAVQEEVSNL ASFMFGSSLDLDLLGIEIDD +MIPGLSVASSRAQPLAAWMNG
Sbjct: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSVASSRAQPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           MEVYSVEADTSRACLILSVGISTRYVYATYKK PVTTAEAEAWEAAKKACGGLHFLAIQD
Sbjct: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 380
           DLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 DLDSEDCVGFWLLLDLPPPPV 381

[Close]

BLAST of Lcy05g004450 vs. NCBI nr
Match: XP_022145109.1 (protein TAB2 homolog, chloroplastic [Momordica charantia])

HSP 1 Score: 712.2 bits (1837), Expect = 2.3e-201
Identity = 357/379 (94.20%), Postives = 364/379 (96.04%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGVLHLRKSRPSSSPFSQPIKTANRFSANCRINQQQLHRFRSNSVSE 60
           MATLSFNP RIRTP  LH+RK  PSSSP SQPIKTANRF  NCRINQQQL RF SNSVSE
Sbjct: 1   MATLSFNPARIRTP-ALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSE 60

Query: 61  SSVSVPEEVEVDEEEDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELVAC 120
           SSVS PEEVEVDEEEDDPTLELAYLDP+TD ESITEWELDFCSRPILDIRGKKVWELVAC
Sbjct: 61  SSVSAPEEVEVDEEEDDPTLELAYLDPDTDTESITEWELDFCSRPILDIRGKKVWELVAC 120

Query: 121 DNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELG 180
           DNSLSLQYTKYFPNNVINSITLRDAI+SI+EELGVPLPEKIRFFRSQMQTIITKACTELG
Sbjct: 121 DNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELG 180

Query: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240
           IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV
Sbjct: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240

Query: 241 QLPFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWMNGME 300
           QLPFS VQEEVSNLKA+FMFGSSLDLDLLGIEID+KTMIPGLSVASSRAQPLAAWMNGME
Sbjct: 241 QLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME 300

Query: 301 VYSVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL 360
           VYSVEADTSR+ LILSVGISTRYVYATYKKTPV TAEAEAWEAAKKACGGLHFLAIQDDL
Sbjct: 301 VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDL 360

Query: 361 DSEDCVGFWLLLDLPPPPV 380
           DSEDCVGFWLLLDLPPPPV
Sbjct: 361 DSEDCVGFWLLLDLPPPPV 378

[Close]

BLAST of Lcy05g004450 vs. NCBI nr
Match: XP_022959769.1 (protein TAB2 homolog, chloroplastic [Cucurbita moschata])

HSP 1 Score: 711.1 bits (1834), Expect = 5.2e-201
Identity = 358/381 (93.96%), Postives = 364/381 (95.54%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGVLHLRKSRPSSSPFSQPIKTANRFSANCRINQQQLHRFRSNSVSE 60
           MATLSFNPTRIRTPG LHL K +P S PFSQ IKT  RFSA+ RINQQ L RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60

Query: 61  SSVSVPEEVE--VDEEEDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SS+SVPEEVE  VDE+EDDPTLELAYLD ETDPESITEWELDFCSRPILDIRGKKVWELV
Sbjct: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
           ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE
Sbjct: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180

Query: 181 LGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWA 240
           LG+KPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELP+NLFGERWA
Sbjct: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240

Query: 241 FVQLPFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWMNG 300
           FVQLPFSAVQEEVSNL ASFMFGSSLDLDLLGIEIDD TMIPGLSVASSRAQPLAAWMNG
Sbjct: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           MEVYSVEADTSRACLILSVGISTRYVYATYKK PVTTAEAEAWEAAKKACGGLHFLAIQD
Sbjct: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 380
           DLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 DLDSEDCVGFWLLLDLPPPPV 381

[Close]

BLAST of Lcy05g004450 vs. NCBI nr
Match: XP_023004563.1 (protein TAB2 homolog, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 710.7 bits (1833), Expect = 6.8e-201
Identity = 358/383 (93.47%), Postives = 364/383 (95.04%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGVLHLRKSRPSSSPFSQPIKTANRFSANCRINQQQLHRFRSNSVSE 60
           MATLSFNPTRIRTPG LHL K +P S PF Q IKTA RFSA+ RINQQ LHRFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSVSVPEEVEV----DEEEDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWE 120
           SS+SVPEEVEV    DE EDDPTLELAYLD ETDPESITEWELDFCSRPILDIRGKKVWE
Sbjct: 61  SSISVPEEVEVAVDEDEAEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWE 120

Query: 121 LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC 180
           LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC
Sbjct: 121 LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC 180

Query: 181 TELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGER 240
           TELG+KPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELP+NLFGER
Sbjct: 181 TELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGER 240

Query: 241 WAFVQLPFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWM 300
           WAFVQLPFSAVQEEVSNL ASFMFGSSLDLDLLGIEIDD +MIPGLSVASSRAQPLAAWM
Sbjct: 241 WAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSVASSRAQPLAAWM 300

Query: 301 NGMEVYSVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAI 360
           NGMEVYSVEADTSRACLILSVGISTRYVYATYKK PVTTAEAEAWEAAKKACGGLHFLAI
Sbjct: 301 NGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAI 360

Query: 361 QDDLDSEDCVGFWLLLDLPPPPV 380
           QDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 QDDLDSEDCVGFWLLLDLPPPPV 383

[Close]

BLAST of Lcy05g004450 vs. TAIR 10
Match: AT3G08010.1 (RNA binding )

HSP 1 Score: 565.8 bits (1457), Expect = 2.5e-161
Identity = 280/381 (73.49%), Postives = 326/381 (85.56%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGVLHLRKSRPSSSPFSQPIKTANRFSANCRINQQQLHRFRSNSVSE 60
           MATL FN  RI+TP +  +    P  S F++PIKT + FS+   + +    RF S S+ E
Sbjct: 1   MATLGFNTRRIQTPSLPRI----PKPSSFTKPIKTHHLFSSETLLKR---CRFVSRSLPE 60

Query: 61  SSVSVPEEVEV--DEEEDDPTLELAYLDPETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SS+S+ +E EV  + EEDDPT EL+YLDPE+D +SI EWELDFCSRPILD RGKK+WELV
Sbjct: 61  SSLSITKEQEVANEVEEDDPTSELSYLDPESDADSIKEWELDFCSRPILDSRGKKIWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
            CD SLSLQ TKYFPNNVINSITL+DAI +IT++LGVPLPEKIRFFRSQMQTIITKAC E
Sbjct: 121 VCDASLSLQVTKYFPNNVINSITLKDAIVTITQDLGVPLPEKIRFFRSQMQTIITKACKE 180

Query: 181 LGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWA 240
           L IK +PSKRCLSL LWL+ERY+TVYTRHPGFQKGS PLL+LDNPFPM LPENLFGE+WA
Sbjct: 181 LAIKAVPSKRCLSLFLWLQERYDTVYTRHPGFQKGSLPLLSLDNPFPMNLPENLFGEKWA 240

Query: 241 FVQLPFSAVQEEVSNLKASFMFGSSLDLDLLGIEIDDKTMIPGLSVASSRAQPLAAWMNG 300
           FVQLP+SAV+EE+S+    F+FG+SLDLDLLGIE+D+ T+IPGLSVA+SRA+PLAAWMNG
Sbjct: 241 FVQLPYSAVREEISDFDEKFVFGASLDLDLLGIEVDENTLIPGLSVATSRAKPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           +EV S+EAD+S+ CLILSVGI+TRYVYATYKKTPVTT EAEAWE+AKK  GGLHFLAIQD
Sbjct: 301 LEVCSIEADSSKGCLILSVGIATRYVYATYKKTPVTTDEAEAWESAKKTSGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 380
           DLDS+DCVGFWLL+DLPPPPV
Sbjct: 361 DLDSDDCVGFWLLIDLPPPPV 374

The following BLAST results are available for this feature:

BLAST of Lcy05g004450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFB3	3.6e-160	73.49	Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATAB2 PE=...	[more]
B4FTR7	2.9e-138	63.32	Protein TAB2 homolog, chloroplastic OS=Zea mays OX=4577 GN=TAB2 PE=2 SV=1	[more]
Q6K9C1	1.4e-135	64.99	Protein TAB2 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]

BLAST of Lcy05g004450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KWL7	8.7e-202	93.96	protein TAB2 homolog, chloroplastic isoform X3 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1CU88	1.1e-201	94.20	protein TAB2 homolog, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110146...	[more]
A0A6J1H921	2.5e-201	93.96	protein TAB2 homolog, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11146074...	[more]
A0A6J1KZX3	3.3e-201	93.47	protein TAB2 homolog, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5A7UYM5	2.1e-200	93.14	DUF1092 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Lcy05g004450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900264.1	1.4e-201	93.93	protein TAB2 homolog, chloroplastic [Benincasa hispida]	[more]
XP_023004564.1	1.8e-201	93.96	protein TAB2 homolog, chloroplastic isoform X3 [Cucurbita maxima]	[more]
XP_022145109.1	2.3e-201	94.20	protein TAB2 homolog, chloroplastic [Momordica charantia]	[more]
XP_022959769.1	5.2e-201	93.96	protein TAB2 homolog, chloroplastic [Cucurbita moschata]	[more]
XP_023004563.1	6.8e-201	93.47	protein TAB2 homolog, chloroplastic isoform X2 [Cucurbita maxima]	[more]

BLAST of Lcy05g004450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08010.1	2.5e-161	73.49	RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009472	Tab2-like	PFAM	PF06485	Tab2_like	coord: 97..371 e-value: 1.1E-89 score: 300.6
IPR009472	Tab2-like	PANTHER	PTHR34556	FAMILY NOT NAMED	coord: 1..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g004450.1	Lcy05g004450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding