Lcy05g004420 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g004420
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Cytokinin riboside 5'-monophosphate phosphoribohydrolase
Location	Chr05: 3931194 .. 3931553 (+)
RNA-Seq Expression	Lcy05g004420
Synteny	Lcy05g004420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATCGGAGTGGTTTATTATTATCTTGACCTTTCATTGGTTTCGAAAAATGTGTAATCAGGTAGGATTGCTAAATGTAGATGGGTACTATGACAGCTTGCTTGCCTTATTTGACAAAGGAGTGGAGGAAGGTTTCATAGACAATTCAGCCAGGAAAATAGTGGTAATAGCAAACACAGCTGAGGAACTGATAAAGAAAATGGAGGTAGGAGGGGGGAAAGAAAGTGCTTTGTTAGAGTTTGCTGAATTATTGGGGGAAAACAGATTTTTGTTTGAAAAAAGGCAAGAAGAGAAAGTGATTAGTCATTGTATTTTGGTTGTATTTTGCAGGAGTATGTGGCTGTCCATGACAAGGTAG

mRNA sequence

ATGTTATCGGAGTGGTTTATTATTATCTTGACCTTTCATTGGTTTCGAAAAATGTGTAATCAGGTAGGATTGCTAAATGTAGATGGGTACTATGACAGCTTGCTTGCCTTATTTGACAAAGGAGTGGAGGAAGGTTTCATAGACAATTCAGCCAGGAAAATAGTGGTAATAGCAAACACAGCTGAGGAACTGATAAAGAAAATGGAGGTAGGAGGGGGGAAAGAAAGTGCTTTGTTAGAGTTTGCTGAATTATTGGGGGAAAACAGATTTTTGTTTGAAAAAAGGCAAGAAGAGAAAGTGATTAGTCATTGTATTTTGGTTGTATTTTGCAGGAGTATGTGGCTGTCCATGACAAGGTAG

Coding sequence (CDS)

ATGTTATCGGAGTGGTTTATTATTATCTTGACCTTTCATTGGTTTCGAAAAATGTGTAATCAGGTAGGATTGCTAAATGTAGATGGGTACTATGACAGCTTGCTTGCCTTATTTGACAAAGGAGTGGAGGAAGGTTTCATAGACAATTCAGCCAGGAAAATAGTGGTAATAGCAAACACAGCTGAGGAACTGATAAAGAAAATGGAGGTAGGAGGGGGGAAAGAAAGTGCTTTGTTAGAGTTTGCTGAATTATTGGGGGAAAACAGATTTTTGTTTGAAAAAAGGCAAGAAGAGAAAGTGATTAGTCATTGTATTTTGGTTGTATTTTGCAGGAGTATGTGGCTGTCCATGACAAGGTAG

Protein sequence

MLSEWFIIILTFHWFRKMCNQVGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKMEVGGGKESALLEFAELLGENRFLFEKRQEEKVISHCILVVFCRSMWLSMTR

Homology

[Close]

BLAST of Lcy05g004420 vs. ExPASy Swiss-Prot
Match: Q851C7 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL4 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 6.6e-12
Identity = 35/59 (59.32%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKMEVGGGKESALLE 81
           VGLLNVDGYY++LL+LFDKGVEEGFID +AR I V+A+ A EL+ K+       +A +E
Sbjct: 149 VGLLNVDGYYNNLLSLFDKGVEEGFIDAAARNIFVLADNAGELLTKLTEAAAAAAAAVE 207

[Close]

BLAST of Lcy05g004420 vs. ExPASy Swiss-Prot
Match: Q84MC2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 OS=Arabidopsis thaliana OX=3702 GN=LOG8 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 8.7e-12
Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKME 70
           VGLLNVDGYY++LLALFD GVEEGFI   AR IVV A TA+EL++KME
Sbjct: 138 VGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKME 185

[Close]

BLAST of Lcy05g004420 vs. ExPASy Swiss-Prot
Match: Q7XDB8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL10 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 8.7e-12
Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKME 70
           VGLLNVDGYY+SLL   DK VEEGFI+ SAR+I+V+A TAEEL+ K+E
Sbjct: 135 VGLLNVDGYYNSLLTFIDKAVEEGFINTSARRIIVMAPTAEELMDKLE 182

[Close]

BLAST of Lcy05g004420 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-11
Identity = 32/48 (66.67%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKME 70
           VGLLNVDGYY+SLL+  DK VEEGFI  +AR+I++ A TA+EL+KK+E
Sbjct: 142 VGLLNVDGYYNSLLSFIDKAVEEGFISTNARQIIISAPTAKELVKKLE 189

[Close]

BLAST of Lcy05g004420 vs. ExPASy Swiss-Prot
Match: Q8LR50 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL1 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL1 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-11
Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKME 70
           VGLLNVDGYYD LLALFDKG  EGFI    R+I+V A TA EL++KME
Sbjct: 147 VGLLNVDGYYDPLLALFDKGAAEGFIKADCRQIIVSAPTAHELLRKME 194

[Close]

BLAST of Lcy05g004420 vs. ExPASy TrEMBL
Match: A0A6J1KWU9 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111497868 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.6e-24
Identity = 65/98 (66.33%), Postives = 70/98 (71.43%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKMEVGGGKESALLEF 81
           VGLLNVDGYYDSLLALFDKGVEEGFIDN+ARKIVVIANTAEELI+ MEVG G+E      
Sbjct: 146 VGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVGRGEER----- 205

Query: 82  AELLGENRFLFEKRQEEKVISHCILVVFCRSMWLSMTR 120
                              I+HCIL +FCRSMWLSMTR
Sbjct: 206 -------------------ITHCILAMFCRSMWLSMTR 219

[Close]

BLAST of Lcy05g004420 vs. ExPASy TrEMBL
Match: A0A6J1H7A3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111460745 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.6e-24
Identity = 65/98 (66.33%), Postives = 70/98 (71.43%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKMEVGGGKESALLEF 81
           VGLLNVDGYYDSLLALFDKGVEEGFIDN+ARKIVVIANTAEELI+ MEVG G+E      
Sbjct: 146 VGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVGRGEER----- 205

Query: 82  AELLGENRFLFEKRQEEKVISHCILVVFCRSMWLSMTR 120
                              I+HCIL +FCRSMWLSMTR
Sbjct: 206 -------------------ITHCILAMFCRSMWLSMTR 219

[Close]

BLAST of Lcy05g004420 vs. ExPASy TrEMBL
Match: A0A6J1KQY9 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111497868 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19
Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKMEVGGGKESALLEF 81
           VGLLNVDGYYDSLLALFDKGVEEGFIDN+ARKIVVIANTAEELI+ MEVG G E ALLE 
Sbjct: 146 VGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVGRG-EGALLEV 205

Query: 82  AELL 86
           AELL
Sbjct: 206 AELL 208

[Close]

BLAST of Lcy05g004420 vs. ExPASy TrEMBL
Match: A0A6J1KWU5 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111497868 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19
Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKMEVGGGKESALLEF 81
           VGLLNVDGYYDSLLALFDKGVEEGFIDN+ARKIVVIANTAEELI+ MEVG G E ALLE 
Sbjct: 170 VGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVGRG-EGALLEV 229

Query: 82  AELL 86
           AELL
Sbjct: 230 AELL 232

[Close]

BLAST of Lcy05g004420 vs. ExPASy TrEMBL
Match: A0A6J1H5S8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111460745 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19
Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKMEVGGGKESALLEF 81
           VGLLNVDGYYDSLLALFDKGVEEGFIDN+ARKIVVIANTAEELI+ MEVG G E ALLE 
Sbjct: 146 VGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVGRG-EGALLEV 205

Query: 82  AELL 86
           AELL
Sbjct: 206 AELL 208

[Close]

BLAST of Lcy05g004420 vs. NCBI nr
Match: XP_023515226.1 (probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32
Identity = 80/98 (81.63%), Postives = 87/98 (88.78%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKMEVGGGKESALLEF 81
           VGLLNVDGYYDSLLALFDKGVEEGFIDN+ARKIVVIANTAEELI+ MEVG G E ALLE 
Sbjct: 146 VGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVGRG-EGALLEV 205

Query: 82  AELLGENRFLFEKRQEEKVISHCILVVFCRSMWLSMTR 120
           AELL  NRFL EK ++E+ I+HCIL +FCRSMWLSMTR
Sbjct: 206 AELLVGNRFLSEKARKER-ITHCILAMFCRSMWLSMTR 241

[Close]

BLAST of Lcy05g004420 vs. NCBI nr
Match: XP_023515224.1 (probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32
Identity = 80/98 (81.63%), Postives = 87/98 (88.78%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKMEVGGGKESALLEF 81
           VGLLNVDGYYDSLLALFDKGVEEGFIDN+ARKIVVIANTAEELI+ MEVG G E ALLE 
Sbjct: 170 VGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVGRG-EGALLEV 229

Query: 82  AELLGENRFLFEKRQEEKVISHCILVVFCRSMWLSMTR 120
           AELL  NRFL EK ++E+ I+HCIL +FCRSMWLSMTR
Sbjct: 230 AELLVGNRFLSEKARKER-ITHCILAMFCRSMWLSMTR 265

[Close]

BLAST of Lcy05g004420 vs. NCBI nr
Match: XP_023004634.1 (probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG6 isoform X6 [Cucurbita maxima])

HSP 1 Score: 120.6 bits (301), Expect = 9.5e-24
Identity = 65/98 (66.33%), Postives = 70/98 (71.43%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKMEVGGGKESALLEF 81
           VGLLNVDGYYDSLLALFDKGVEEGFIDN+ARKIVVIANTAEELI+ MEVG G+E      
Sbjct: 146 VGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVGRGEER----- 205

Query: 82  AELLGENRFLFEKRQEEKVISHCILVVFCRSMWLSMTR 120
                              I+HCIL +FCRSMWLSMTR
Sbjct: 206 -------------------ITHCILAMFCRSMWLSMTR 219

[Close]

BLAST of Lcy05g004420 vs. NCBI nr
Match: XP_022959775.1 (probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 isoform X4 [Cucurbita moschata])

HSP 1 Score: 120.6 bits (301), Expect = 9.5e-24
Identity = 65/98 (66.33%), Postives = 70/98 (71.43%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKMEVGGGKESALLEF 81
           VGLLNVDGYYDSLLALFDKGVEEGFIDN+ARKIVVIANTAEELI+ MEVG G+E      
Sbjct: 146 VGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVGRGEER----- 205

Query: 82  AELLGENRFLFEKRQEEKVISHCILVVFCRSMWLSMTR 120
                              I+HCIL +FCRSMWLSMTR
Sbjct: 206 -------------------ITHCILAMFCRSMWLSMTR 219

[Close]

BLAST of Lcy05g004420 vs. NCBI nr
Match: XP_023004629.1 (probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 isoform X1 [Cucurbita maxima])

HSP 1 Score: 105.9 bits (263), Expect = 2.4e-19
Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKMEVGGGKESALLEF 81
           VGLLNVDGYYDSLLALFDKGVEEGFIDN+ARKIVVIANTAEELI+ MEVG G E ALLE 
Sbjct: 170 VGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVGRG-EGALLEV 229

Query: 82  AELL 86
           AELL
Sbjct: 230 AELL 232

[Close]

BLAST of Lcy05g004420 vs. TAIR 10
Match: AT5G11950.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 71.2 bits (173), Expect = 6.1e-13
Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKME 70
           VGLLNVDGYY++LLALFD GVEEGFI   AR IVV A TA+EL++KME
Sbjct: 138 VGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKME 185

[Close]

BLAST of Lcy05g004420 vs. TAIR 10
Match: AT5G11950.2 (Putative lysine decarboxylase family protein )

HSP 1 Score: 71.2 bits (173), Expect = 6.1e-13
Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKME 70
           VGLLNVDGYY++LLALFD GVEEGFI   AR IVV A TA+EL++KME
Sbjct: 138 VGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKME 185

[Close]

BLAST of Lcy05g004420 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 69.7 bits (169), Expect = 1.8e-12
Identity = 32/48 (66.67%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKME 70
           VGLLNVDGYY+SLL+  DK VEEGFI  +AR+I++ A TA+EL+KK+E
Sbjct: 142 VGLLNVDGYYNSLLSFIDKAVEEGFISTNARQIIISAPTAKELVKKLE 189

[Close]

BLAST of Lcy05g004420 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein )

HSP 1 Score: 69.3 bits (168), Expect = 2.3e-12
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKME 70
           VGLLNVDGYY+SLL+  DK VEEGFI  +AR+I+V A TA+EL+KK+E
Sbjct: 142 VGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKELVKKLE 189

[Close]

BLAST of Lcy05g004420 vs. TAIR 10
Match: AT2G37210.2 (lysine decarboxylase family protein )

HSP 1 Score: 69.3 bits (168), Expect = 2.3e-12
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 22  VGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANTAEELIKKME 70
           VGLLNVDGYY+SLL+  DK VEEGFI  +AR+I+V A TA+EL+KK+E
Sbjct: 166 VGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKELVKKLE 213

The following BLAST results are available for this feature:

BLAST of Lcy05g004420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q851C7	6.6e-12	59.32	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Oryza ...	[more]
Q84MC2	8.7e-12	75.00	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 OS=Arabidopsis tha...	[more]
Q7XDB8	8.7e-12	70.83	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryz...	[more]
Q9LFH3	2.5e-11	66.67	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis tha...	[more]
Q8LR50	2.5e-11	70.83	Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL1 OS=Oryza...	[more]

BLAST of Lcy05g004420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KWU9	4.6e-24	66.33	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=...	[more]
A0A6J1H7A3	4.6e-24	66.33	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata O...	[more]
A0A6J1KQY9	1.2e-19	89.06	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=...	[more]
A0A6J1KWU5	1.2e-19	89.06	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=...	[more]
A0A6J1H5S8	1.2e-19	89.06	Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata O...	[more]

BLAST of Lcy05g004420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515226.1	1.5e-32	81.63	probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 isoform...	[more]
XP_023515224.1	1.5e-32	81.63	probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 isoform...	[more]
XP_023004634.1	9.5e-24	66.33	probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG6 isoform X...	[more]
XP_022959775.1	9.5e-24	66.33	probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 isoform...	[more]
XP_023004629.1	2.4e-19	89.06	probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 isoform...	[more]

BLAST of Lcy05g004420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11950.1	6.1e-13	75.00	Putative lysine decarboxylase family protein	[more]
AT5G11950.2	6.1e-13	75.00	Putative lysine decarboxylase family protein	[more]
AT3G53450.1	1.8e-12	66.67	Putative lysine decarboxylase family protein	[more]
AT2G37210.1	2.3e-12	68.75	lysine decarboxylase family protein	[more]
AT2G37210.2	2.3e-12	68.75	lysine decarboxylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.450		coord: 2..80 e-value: 5.1E-15 score: 57.6
None	No IPR available	PANTHER	PTHR31223	LOG FAMILY PROTEIN YJL055W	coord: 20..70
None	No IPR available	PANTHER	PTHR31223:SF51	CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG4-RELATED	coord: 20..70
None	No IPR available	SUPERFAMILY	102405	MCP/YpsA-like	coord: 7..68
IPR031100	LOG family	PFAM	PF03641	Lysine_decarbox	coord: 9..68 e-value: 2.7E-9 score: 37.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g004420.1	Lcy05g004420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009691	cytokinin biosynthetic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0102682	N6-(Delta2-isopentenyl)-adenosine 5'-monophosphate phosphoribohydrolase activity