Lcy05g004380 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g004380
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Nuclear transcription factor Y subunit
Location	Chr05: 3896756 .. 3899827 (+)
RNA-Seq Expression	Lcy05g004380
Synteny	Lcy05g004380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAATTTCCTTCTCTCTGTCATCTTCCACTGCCACTGCACAGAGAGAGAGGGAGAGAGAGAGGGAGAGAGAGAGAGAGTAATGGAACTGAGCTAGAAGACCAGAGCGACCTGTGAAGCTAAAGCTTTCTAGGGTTCGATCGTCCGTTTCATATCACAGTTGTAAGTTGTTTTCCTGCAATTTGCTCTTACTTGTCTCTGATTTCGCTCCTTACAATCGGAATTTTGATCGGAAATGTTTTTATTAAGGCTCCATTTCTCTGAGAAATTTGTGCTTATTTTTCATCTAGAGTGATAAAATATAGATAGAAAACTGTAGGAATTTTGAGTTTATGAATGAGCAGAACAGAGTAATACCGGAATTTGATTGCAAAAGTGATTCTGAACTTGAAATCGTCGGGAGCGAAGAGGCTAGGAAATTGTACTGGCCTTCGTCTTGTTGAGTTAGGAATTTCGCTGGAGAATTATGAATCTACTGTTTTCCCCCCCTTTTATCTAAATTTCTAGTTCAGTTGCTGCATGCTTTTCGGCAACCGGAGAAAGTCCTTTGGAGAGCCTCTGTTTTGGATCTAAGAAGATTGCAGAGGTTGAAGTTTGTATACACTAAATGGAAGCGATAGATGTAGTTTGTAACGAATATCTAGTACATTTAACATGTTATTTTTTCACCGTAATCTAGTATCTCTTATCATATCTCGAAGCCCCTGTAATGTATTGTAGATGAGTTATATGGATCTCAATAGTTTTTGTCAATATTAAGTAATCCTCTTTCTGGCATGCTGGAGCTCTTTCAATGGAGTTTTGCGTTGCTTAGGATTAAAGAACTGGGTAAAATTGTGTCCTATTCAAGTGCTTTTCACGAGAAGCAAAAAGGAGCAGCGCAAACTATGGAACCTAGTGGAGTAGATTTAGTTGAGTACCTCTTGATGCTACGGTTTGGTATTAGTGGGAGTGAGTTATATTGTTTTTATTTTCTTTCTAATTTTCTCCCTTCTTGGGTGACAGGATAAGTTTGAACGATGCCATCAAAACCAGAAAATGTAGACCAACGAGTAGCTGATGGGGCGAAGTATTTGCTGCAATCGACCAAATACTCTGAGCCTTGGTGGCACGGAAGTGGGAACAATACCATCGCAGGTGAAGATGCTACCAAAACATCTTCTGCGGAATACCTGAACGTTACTGTCACAAGTGGAGGAACGCAGTCACAAGCAAATGGTACGGTCATGATTCATGATGATGGAAAAATCAACTTAAGATGCCTTTCTGTAAAGTACATGTCTATGGTGTGGATATGCTAAAATTATCACTAACTTAATATATTTGCCTTTGAATTCACAATTTAAGCAATATATTGAAACTTTTCTTGGATCAGATGAAAATATTGGGAAAGAAGTCCAGCATCTCAAGTACATTCCATTTTCTGCATCCCCACCCGTGGGTGAACACCTTGATCTAAATTCCCAGATGGAACTTGTTGGCCATTCAATTGTAAGAACTGTCTATCTCTCTTTGAAACCAATGTATACGAAGAAACAAAGATGAGTAGTGTGTCTAGTTCTTTATTTGTGTGCAGTGAATAATGAATATATTTCTTTTCCAAGAAAAATAGATGTTCGATTTTTTAAGACATTGCTTCACTCTTCACTGGATACAAAAAGGACTTCAAGTATCTCCATTTGCAGGTTTTGACATCATATCCTTTTTCAGATGCACAGTATTGTCAAATGCTGACTTCTTATGGACCACAATCAACGGTATGCTCTGATTTACTTGAATGGTTTCCTTTTGCTAGTTCACATGTTCCATTTTTGTTAAATATGGCGTTCATTATATAGGACACATTTTGTTAAAATTCATATGATTAGTTGAATAGAAAGGATCATACCGAGGGCAATCATCCATGTTTATGATATATAGTTAAAAATTTCTGTATGAATAGAGGCTAAACACGTCCTTCCCTATTATATGCCCTTGTCATGTTTGTTTCTTATGGATAATTTTTTTGCAAATAGATTCGCCACCTATCAATTCCTCTTAATTTTACCGAACAAGAATGCATATAAAAACGGGGCTTCCTTTTGTACAGTCCCTAATTGCTGATTGACTGTTCAAGGATTATGATTATACTTGATTTTCCTGCAGTTACCTCATTTTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAATGGAAGAAGAGCCCGTTTATGTTAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGAGCCAAAGCTGAGCTTGAGAAGAAAGTGATCAAAAGTAGAAAGGTATAGCTAACAATAACATGTTTTGAGGAGAAAATAAAATTGACTCATAGATATTTCTTAAACTAAGCGGACCTAAATGGATATTTTTAGTTAATAAAGGAAACGTTTGTTATAAATCGTCTTTCCAGTTGGTTACAGCTTACTGGTGGGAGGGTCATTTCATTGTTTCATACAATTACTATAGATAGTCTTTCGTATGTTTCATCAGGGCTATCTTGTCATGTCTATCGATAGTCTTTCGTATGTTTCATCAGGGCTATCTTGTCATGTCTATCGTGGTCACACTCAATGGTCAATTACGTTTCATCGTAGTTAAAATCCCATAATTTATTTTTCTGGATACTCTTTTTCATTTTGTGCAGCCATATCTTCATGAATCCAGACACCTCCATGCGATGAGACGAGCAAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAATGTCATTTCCAATGCAACTACGGAGGAAGACATCAATTCTGGTGCAAACCATTCAACAAAAGCTGTCAGTGAGGCTGGATCAAATTACATGGCGACTGATGAAAATGGAATCAAGGATACGCTTGATGAGGAGGGCAGAGAGTTCATGACACAAAATATGCAGATAACACACGCTTTCTTCAATGGAAAATCGAATGGCCTTGGTCTGTCCACATACAATTCACAACTTGCTGATGTCGAGGGAGGGCATCTCGATCAGCCGCATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGGGCCATCCCCATCAAGTGA

mRNA sequence

TTAATTTCCTTCTCTCTGTCATCTTCCACTGCCACTGCACAGAGAGAGAGGGAGAGAGAGAGGGAGAGAGAGAGAGAGTAATGGAACTGAGCTAGAAGACCAGAGCGACCTGTGAAGCTAAAGCTTTCTAGGGTTCGATCGTCCGTTTCATATCACAGTTGTAAGTTGTTTTCCTGCAATTTGCTCTTACTTGTCTCTGATTTCGCTCCTTACAATCGGAATTTTGATCGGAAATGTTTTTATTAAGGCTCCATTTCTCTGAGAAATTTGTGCTTATTTTTCATCTAGAGTGATAAAATATAGATAGAAAACTGTAGGAATTTTGAGTTTATGAATGAGCAGAACAGAGTAATACCGGAATTTGATTGCAAAAGTGATTCTGAACTTGAAATCGTCGGGAGCGAAGAGGCTAGGAAATTGTACTGGCCTTCGTCTTGTTGAGTTAGGAATTTCGCTGGAGAATTATGAATCTACTGTTTTCCCCCCCTTTTATCTAAATTTCTAGTTCAGTTGCTGCATGCTTTTCGGCAACCGGAGAAAGTCCTTTGGAGAGCCTCTGTTTTGGATCTAAGAAGATTGCAGAGGTTGAAGTTTGTATACACTAAATGGAAGCGATAGATGTAGTTTGTAACGAATATCTAGTACATTTAACATGTTATTTTTTCACCGTAATCTAGTATCTCTTATCATATCTCGAAGCCCCTGTAATGTATTGTAGATGAGTTATATGGATCTCAATAGTTTTTGTCAATATTAAGTAATCCTCTTTCTGGCATGCTGGAGCTCTTTCAATGGAGTTTTGCGTTGCTTAGGATTAAAGAACTGGGTAAAATTGTGTCCTATTCAAGTGCTTTTCACGAGAAGCAAAAAGGAGCAGCGCAAACTATGGAACCTAGTGGAGTAGATTTAGTTGAGTACCTCTTGATGCTACGGTTTGGTATTAGTGGGAGTGAGTTATATTGTTTTTATTTTCTTTCTAATTTTCTCCCTTCTTGGGTGACAGGATAAGTTTGAACGATGCCATCAAAACCAGAAAATGTAGACCAACGAGTAGCTGATGGGGCGAAGTATTTGCTGCAATCGACCAAATACTCTGAGCCTTGGTGGCACGGAAGTGGGAACAATACCATCGCAGGTGAAGATGCTACCAAAACATCTTCTGCGGAATACCTGAACGTTACTGTCACAAGTGGAGGAACGCAGTCACAAGCAAATGATGAAAATATTGGGAAAGAAGTCCAGCATCTCAAGTACATTCCATTTTCTGCATCCCCACCCGTGGGTGAACACCTTGATCTAAATTCCCAGATGGAACTTGTTGGCCATTCAATTGTTTTGACATCATATCCTTTTTCAGATGCACAGTATTGTCAAATGCTGACTTCTTATGGACCACAATCAACGTTACCTCATTTTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAATGGAAGAAGAGCCCGTTTATGTTAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGAGCCAAAGCTGAGCTTGAGAAGAAAGTGATCAAAAGTAGAAAGCCATATCTTCATGAATCCAGACACCTCCATGCGATGAGACGAGCAAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAATGTCATTTCCAATGCAACTACGGAGGAAGACATCAATTCTGGTGCAAACCATTCAACAAAAGCTGTCAGTGAGGCTGGATCAAATTACATGGCGACTGATGAAAATGGAATCAAGGATACGCTTGATGAGGAGGGCAGAGAGTTCATGACACAAAATATGCAGATAACACACGCTTTCTTCAATGGAAAATCGAATGGCCTTGGTCTGTCCACATACAATTCACAACTTGCTGATGTCGAGGGAGGGCATCTCGATCAGCCGCATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGGGCCATCCCCATCAAGTGA

Coding sequence (CDS)

ATGCCATCAAAACCAGAAAATGTAGACCAACGAGTAGCTGATGGGGCGAAGTATTTGCTGCAATCGACCAAATACTCTGAGCCTTGGTGGCACGGAAGTGGGAACAATACCATCGCAGGTGAAGATGCTACCAAAACATCTTCTGCGGAATACCTGAACGTTACTGTCACAAGTGGAGGAACGCAGTCACAAGCAAATGATGAAAATATTGGGAAAGAAGTCCAGCATCTCAAGTACATTCCATTTTCTGCATCCCCACCCGTGGGTGAACACCTTGATCTAAATTCCCAGATGGAACTTGTTGGCCATTCAATTGTTTTGACATCATATCCTTTTTCAGATGCACAGTATTGTCAAATGCTGACTTCTTATGGACCACAATCAACGTTACCTCATTTTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAATGGAAGAAGAGCCCGTTTATGTTAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGAGCCAAAGCTGAGCTTGAGAAGAAAGTGATCAAAAGTAGAAAGCCATATCTTCATGAATCCAGACACCTCCATGCGATGAGACGAGCAAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAATGTCATTTCCAATGCAACTACGGAGGAAGACATCAATTCTGGTGCAAACCATTCAACAAAAGCTGTCAGTGAGGCTGGATCAAATTACATGGCGACTGATGAAAATGGAATCAAGGATACGCTTGATGAGGAGGGCAGAGAGTTCATGACACAAAATATGCAGATAACACACGCTTTCTTCAATGGAAAATCGAATGGCCTTGGTCTGTCCACATACAATTCACAACTTGCTGATGTCGAGGGAGGGCATCTCGATCAGCCGCATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGGGCCATCCCCATCAAGTGA

Protein sequence

MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHLKYIPFSASPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATTEEDINSGANHSTKAVSEAGSNYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNGLGLSTYNSQLADVEGGHLDQPHESMQVNGAPQRAIPIK

Homology

[Close]

BLAST of Lcy05g004380 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.4e-32
Identity = 103/261 (39.46%), Postives = 145/261 (55.56%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHG-----SGNNTIAGEDATKTSSAEYLNVT 60
           M SK ++   +V       + S+  S   WH      + N+++   D +  S A    + 
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIA----LA 65

Query: 61  VTSGGTQSQANDENIGKEVQHLKYIPFSASPPVGEHLDLNSQM------------ELVGH 120
           + S G++S +N +N   +   +   P SA    G++ D N +             +LVGH
Sbjct: 66  LESNGSKSPSNRDNTVNKESQVTTSPQSA----GDYSDKNQESLHHGITQPPPHPQLVGH 125

Query: 121 SI-VLTSYPFSDAQYCQMLTSYG--PQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYH 180
           ++   +S P+ D  Y  ++ +YG  P   +P + G+ H+RMPLP EM +EPV+VNAKQY 
Sbjct: 126 TVGWASSNPYQDPYYAGVMGAYGHHPLGFVP-YGGMPHSRMPLPPEMAQEPVFVNAKQYQ 185

Query: 181 GILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATT 240
            ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK N   S    
Sbjct: 186 AILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRF--AKKTNTEASKRKA 245

Query: 241 EEDINSGANHSTKAVSEAGSN 242
           EE  N    H T++ S + S+
Sbjct: 246 EEKSN---GHVTQSPSSSNSD 252

[Close]

BLAST of Lcy05g004380 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.9e-30
Identity = 103/280 (36.79%), Postives = 137/280 (48.93%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTI----AGEDATKTSSAEYLNVT- 60
           M SKP   ++   +    + Q   Y+EPWW  +    +         + +SS +  N + 
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 61  ---VTSGGTQSQANDENIG--KEVQ------HLKYIPFSASPPVGEHLDLNSQ-----ME 120
              V S       N EN G  K+ Q       +       + P     +++ Q      E
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPE 120

Query: 121 LVGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQ 180
           LVGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQ
Sbjct: 121 LVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQ 180

Query: 181 YHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNA 240
           Y GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S  
Sbjct: 181 YEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF--AKK-----SEV 240

Query: 241 TTEEDINSGANHSTKAVSEAGSNYMATDENGIKDTLDEEG 259
              ED          A + +GS  + TD N   +TL+  G
Sbjct: 241 EAGEDAGGRDRERGSATNSSGSEQVETDSN---ETLNSSG 270

[Close]

BLAST of Lcy05g004380 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-26
Identity = 71/140 (50.71%), Postives = 86/140 (61.43%), Query Frame = 0


Query: 103 HSIVLTSYPFSDAQYCQMLTSYGPQSTLPH--FYGLHHARMPLPLEMEEEPVYVNAKQYH 162
           +S+    YP+ D  Y  +        T  H    G+    +PLP +  EEPV+VNAKQYH
Sbjct: 51  NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYH 110

Query: 163 GILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATT 222
           GILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR RG GGRFLN KK +    +++ 
Sbjct: 111 GILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSH 170

Query: 223 EEDINSGANHSTKAVSEAGS 241
           EE  N  A  S  A S   S
Sbjct: 171 EEKSNLSAGKSAMAASSGTS 190

[Close]

BLAST of Lcy05g004380 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-25
Identity = 82/196 (41.84%), Postives = 108/196 (55.10%), Query Frame = 0


Query: 63  SQANDENIGKEVQHLKYIPFSASPPVGEHLDLNS-QMELVGHSIVLTSYPFSDAQYCQML 122
           S  N+ +  KE    +  P   S    E +D NS   E + H +    YP+ D  Y  + 
Sbjct: 9   SDNNESHAKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHGL----YPYPDPYYRSV- 68

Query: 123 TSYGPQSTLPHFY--------GLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE 182
             +  Q+ LPH Y        G+    +PL  +  EEPV+VNAKQYHGILRRRQSRAK E
Sbjct: 69  --FAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLE 128

Query: 183 LEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATTEEDINSGANHSTK 242
              + IK++KPY+HESRHLHA+RR RG GGRFLN KK N    +   EE+  S  N +++
Sbjct: 129 ARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKEN---GDHKEEEEATSDEN-TSE 188

Query: 243 AVSEAGSNYMATDENG 250
           A S   S  +A   +G
Sbjct: 189 ASSSLRSEKLAMATSG 193

[Close]

BLAST of Lcy05g004380 vs. ExPASy Swiss-Prot
Match: Q9M9X4 (Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NFYA2 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-24
Identity = 91/256 (35.55%), Postives = 126/256 (49.22%), Query Frame = 0


Query: 29  WWHGSGNNTIAGEDATKTSSAEYLNVTVTSGGTQSQANDENIGKEVQHLKY------IPF 88
           WW   G+  +A E     S + +  V V S G   Q  D+       HL +       P 
Sbjct: 18  WWTAFGSQPLAPESLAGDSDS-FAGVKVGSVGETGQRVDKQ-SNSATHLAFSLGDVKSPR 77

Query: 89  SASPPVGEHLDLNSQMELVGHS--IVLTSYPFSDAQYCQMLTSYGPQSTLPHFYGLHHAR 148
               P G    + S    +G S   + T YP+ + QY  ++++YG QS            
Sbjct: 78  LVPKPHGATFSMQSPCLELGFSQPPIYTKYPYGEQQYYGVVSAYGSQS---------RVM 137

Query: 149 MPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMR 208
           +PL +E E+  +YVN+KQYHGI+RRRQSRAKA   L++K + S  RKPY+H SRHLHA+R
Sbjct: 138 LPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALR 197

Query: 209 RARGSGGRFLNTKKPNNVISNATTEEDINSGANHSTKAVSEAGSNYMATD----ENG--- 266
           R RGSGGRFLNTK  N  + N+ T      G+           SN   ++    ENG   
Sbjct: 198 RPRGSGGRFLNTKSQN--LENSGTNAKKGDGSMQIQSQPKPQQSNSQNSEVVHPENGTMN 257

[Close]

BLAST of Lcy05g004380 vs. ExPASy TrEMBL
Match: A0A1S3CED9 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103499928 PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 5.3e-160
Identity = 286/317 (90.22%), Postives = 293/317 (92.43%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGG 60
           MPS+PENVDQ+VAD AKYLLQS+KYSEPWWHG GNNTIAGEDA KTSSAEYLNVTV SG 
Sbjct: 2   MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGA 61

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQ QANDENIGKEVQHLKYIPFS SPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM
Sbjct: 62  TQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 121

Query: 121 LTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTSYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 122 LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 181

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATTEEDINSGANHSTKAVSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNV+SN   EEDINSGANHSTK VSE GS
Sbjct: 182 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS 241

Query: 241 NYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNGLGLSTYNSQLADVEGGHLDQP 300
            YM T E GIK+TLDE+ RE MTQNMQITHAFFNGKSN  GLSTYNSQL DVEGGHLD P
Sbjct: 242 KYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP 301

Query: 301 HESMQVNGAPQRAIPIK 318
           HESMQVNGAPQRAIPIK
Sbjct: 302 HESMQVNGAPQRAIPIK 318

[Close]

BLAST of Lcy05g004380 vs. ExPASy TrEMBL
Match: A0A5D3CGW1 (Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00810 PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 5.3e-160
Identity = 286/317 (90.22%), Postives = 293/317 (92.43%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGG 60
           MPS+PENVDQ+VAD AKYLLQS+KYSEPWWHG GNNTIAGEDA KTSSAEYLNVTV SG 
Sbjct: 2   MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGA 61

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQ QANDENIGKEVQHLKYIPFS SPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM
Sbjct: 62  TQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 121

Query: 121 LTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTSYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 122 LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 181

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATTEEDINSGANHSTKAVSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNV+SN   EEDINSGANHSTK VSE GS
Sbjct: 182 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS 241

Query: 241 NYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNGLGLSTYNSQLADVEGGHLDQP 300
            YM T E GIK+TLDE+ RE MTQNMQITHAFFNGKSN  GLSTYNSQL DVEGGHLD P
Sbjct: 242 KYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP 301

Query: 301 HESMQVNGAPQRAIPIK 318
           HESMQVNGAPQRAIPIK
Sbjct: 302 HESMQVNGAPQRAIPIK 318

[Close]

BLAST of Lcy05g004380 vs. ExPASy TrEMBL
Match: A0A0A0K612 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_7G428130 PE=3 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.2e-159
Identity = 286/317 (90.22%), Postives = 296/317 (93.38%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGG 60
           MPS+PENVDQ+VADGAKYLLQSTK+SEPWWHG GNNTIAGEDA KTSSAEYLNVTV SG 
Sbjct: 2   MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGA 61

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQ QANDENIGKEVQHLKYIPFS SPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM
Sbjct: 62  TQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 121

Query: 121 LTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTSYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 122 LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 181

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATTEEDINSGANHSTKAVSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNV+SN   EEDI+S ANHSTK VSEA S
Sbjct: 182 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVS 241

Query: 241 NYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNGLGLSTYNSQLADVEGGHLDQP 300
            YM T+E GIK+TLDE+ REFMTQNMQITHAFFNGKSN  GLSTY+SQL DVEGGHLDQP
Sbjct: 242 KYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP 301

Query: 301 HESMQVNGAPQRAIPIK 318
           HESMQVNGAPQRAIPIK
Sbjct: 302 HESMQVNGAPQRAIPIK 318

[Close]

BLAST of Lcy05g004380 vs. ExPASy TrEMBL
Match: A0A6J1GNB7 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111456068 PE=3 SV=1)

HSP 1 Score: 566.2 bits (1458), Expect = 8.4e-158
Identity = 282/316 (89.24%), Postives = 294/316 (93.04%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGG 60
           MPSKPENVDQ++ DG+KYL+QSTKYS  WW+G GNNTIAGEDATKT+SA+YLN TV+SGG
Sbjct: 1   MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGG 60

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQSQ NDENIGKEVQHLKYIPFSASPPVGE LDLNSQMELVGHSIVLTSYPFSDAQYCQM
Sbjct: 61  TQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120

Query: 121 LTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTS GPQST PH YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATTEEDINSGANHSTKAVSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISN   EE INSGANHSTK VSEAGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGS 240

Query: 241 NYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNGLGLSTYNSQLADVEGGHLDQP 300
            YMA DENGIKDTL+EE +EFMTQN+QIT AFFNGK NG G+STY SQLADVEGGHLDQP
Sbjct: 241 KYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300

Query: 301 HESMQVNGAPQRAIPI 317
           HESMQVNGAPQRAIPI
Sbjct: 301 HESMQVNGAPQRAIPI 316

[Close]

BLAST of Lcy05g004380 vs. ExPASy TrEMBL
Match: A0A6J1D8S0 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111018285 PE=3 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 2.3e-155
Identity = 279/320 (87.19%), Postives = 292/320 (91.25%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGG 60
           MPSKPENVDQ+V DG KY+LQSTKYSEPWWHG GNNT  GED  +TSSA+YLNVTV+SG 
Sbjct: 1   MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGA 60

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQSQANDENI KEVQHLKYIPFS SPPVGEHLDLNS MELVGHSIVLTSYPFSDAQY QM
Sbjct: 61  TQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMELVGHSIVLTSYPFSDAQYGQM 120

Query: 121 LTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTSYGPQS LPHFYGLHH RMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 121 LTSYGPQSMLPHFYGLHHGRMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATTEEDINSGANHSTKAVSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKK NNVISN +TEED NSGANH TK+VSEAGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGS 240

Query: 241 NYMATDENGIKDTLDEE---GREFMTQNMQITHAFFNGKSNGLGLSTYNSQLADVEGGHL 300
           NYMATDENG+KDT D++    R FM QNM ITHAFF+GKSNG GLSTYNSQL+DVEGGHL
Sbjct: 241 NYMATDENGVKDTHDDQQEGSRGFMNQNMHITHAFFDGKSNGHGLSTYNSQLSDVEGGHL 300

Query: 301 DQPHESMQVNGAPQRAIPIK 318
            QPHESMQVNGAPQRAIPIK
Sbjct: 301 GQPHESMQVNGAPQRAIPIK 320

[Close]

BLAST of Lcy05g004380 vs. NCBI nr
Match: XP_008461297.1 (PREDICTED: nuclear transcription factor Y subunit A-9-like [Cucumis melo] >XP_008461299.1 PREDICTED: nuclear transcription factor Y subunit A-9-like [Cucumis melo] >KAA0058626.1 nuclear transcription factor Y subunit A-9-like [Cucumis melo var. makuwa] >TYK10434.1 nuclear transcription factor Y subunit A-9-like [Cucumis melo var. makuwa])

HSP 1 Score: 573.5 bits (1477), Expect = 1.1e-159
Identity = 286/317 (90.22%), Postives = 293/317 (92.43%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGG 60
           MPS+PENVDQ+VAD AKYLLQS+KYSEPWWHG GNNTIAGEDA KTSSAEYLNVTV SG 
Sbjct: 2   MPSEPENVDQQVADRAKYLLQSSKYSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGA 61

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQ QANDENIGKEVQHLKYIPFS SPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM
Sbjct: 62  TQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 121

Query: 121 LTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTSYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 122 LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 181

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATTEEDINSGANHSTKAVSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNV+SN   EEDINSGANHSTK VSE GS
Sbjct: 182 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDINSGANHSTKPVSEVGS 241

Query: 241 NYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNGLGLSTYNSQLADVEGGHLDQP 300
            YM T E GIK+TLDE+ RE MTQNMQITHAFFNGKSN  GLSTYNSQL DVEGGHLD P
Sbjct: 242 KYMVTHEKGIKNTLDEQSRELMTQNMQITHAFFNGKSNVHGLSTYNSQLGDVEGGHLDHP 301

Query: 301 HESMQVNGAPQRAIPIK 318
           HESMQVNGAPQRAIPIK
Sbjct: 302 HESMQVNGAPQRAIPIK 318

[Close]

BLAST of Lcy05g004380 vs. NCBI nr
Match: XP_004135933.1 (nuclear transcription factor Y subunit A-4 isoform X1 [Cucumis sativus] >KGN45125.1 hypothetical protein Csa_016712 [Cucumis sativus])

HSP 1 Score: 572.4 bits (1474), Expect = 2.4e-159
Identity = 286/317 (90.22%), Postives = 296/317 (93.38%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGG 60
           MPS+PENVDQ+VADGAKYLLQSTK+SEPWWHG GNNTIAGEDA KTSSAEYLNVTV SG 
Sbjct: 2   MPSEPENVDQQVADGAKYLLQSTKFSEPWWHGVGNNTIAGEDAAKTSSAEYLNVTVASGA 61

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQ QANDENIGKEVQHLKYIPFS SPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM
Sbjct: 62  TQPQANDENIGKEVQHLKYIPFSTSPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 121

Query: 121 LTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTSYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 122 LTSYGPQATLPRIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 181

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATTEEDINSGANHSTKAVSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNV+SN   EEDI+S ANHSTK VSEA S
Sbjct: 182 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVMSNTNREEDIDSVANHSTKPVSEAVS 241

Query: 241 NYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNGLGLSTYNSQLADVEGGHLDQP 300
            YM T+E GIK+TLDE+ REFMTQNMQITHAFFNGKSN  GLSTY+SQL DVEGGHLDQP
Sbjct: 242 KYMVTNEKGIKNTLDEQSREFMTQNMQITHAFFNGKSNVHGLSTYSSQLGDVEGGHLDQP 301

Query: 301 HESMQVNGAPQRAIPIK 318
           HESMQVNGAPQRAIPIK
Sbjct: 302 HESMQVNGAPQRAIPIK 318

[Close]

BLAST of Lcy05g004380 vs. NCBI nr
Match: XP_023547827.1 (nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 567.4 bits (1461), Expect = 7.8e-158
Identity = 281/316 (88.92%), Postives = 293/316 (92.72%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGG 60
           MPSKPENVDQ++ DG+KYL+QSTKYSE WWHG GNNTIAGEDATKT+SA+YLN TV+SGG
Sbjct: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWHGVGNNTIAGEDATKTASADYLNDTVSSGG 60

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQSQANDENIGKEVQHLKYIPFS SPPVGE LDLNSQMELVGHSIVLTSYPFSDAQYCQM
Sbjct: 61  TQSQANDENIGKEVQHLKYIPFSTSPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120

Query: 121 LTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTS GPQST PH YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATTEEDINSGANHSTKAVSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISN   EE INSG NHSTK V+EAGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGTNHSTKPVNEAGS 240

Query: 241 NYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNGLGLSTYNSQLADVEGGHLDQP 300
            YM  DENGIKDTL+EE +EFMTQN+QIT AFFNGK NG G+STY SQLADVEGGHLDQP
Sbjct: 241 KYMGADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300

Query: 301 HESMQVNGAPQRAIPI 317
           HESMQVNGAPQRAIPI
Sbjct: 301 HESMQVNGAPQRAIPI 316

[Close]

BLAST of Lcy05g004380 vs. NCBI nr
Match: KAG7014245.1 (Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 566.2 bits (1458), Expect = 1.7e-157
Identity = 282/316 (89.24%), Postives = 293/316 (92.72%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGG 60
           MPSKPENVDQ++ DG+KYL+QSTKYSE WW+G GNN IAGEDATKT+SAEYLN TV+SGG
Sbjct: 1   MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGG 60

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQSQANDENIGKEVQHLKYIPFSASPPVGE LDLNSQMELVGHSIVLTSYPFSDAQYCQM
Sbjct: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120

Query: 121 LTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTS GPQST PH YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATTEEDINSGANHSTKAVSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISN   EE INSGANHSTK V EAGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGS 240

Query: 241 NYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNGLGLSTYNSQLADVEGGHLDQP 300
            YM  DENGIKDTL+EE +EFMTQN+QIT AFFNGK NG G+STY SQLADVEGGHLDQP
Sbjct: 241 KYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300

Query: 301 HESMQVNGAPQRAIPI 317
           HESMQVNGAPQRAIPI
Sbjct: 301 HESMQVNGAPQRAIPI 316

[Close]

BLAST of Lcy05g004380 vs. NCBI nr
Match: XP_022953565.1 (nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita moschata] >XP_022953566.1 nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 566.2 bits (1458), Expect = 1.7e-157
Identity = 282/316 (89.24%), Postives = 294/316 (93.04%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTIAGEDATKTSSAEYLNVTVTSGG 60
           MPSKPENVDQ++ DG+KYL+QSTKYS  WW+G GNNTIAGEDATKT+SA+YLN TV+SGG
Sbjct: 1   MPSKPENVDQQIVDGSKYLVQSTKYSGAWWNGVGNNTIAGEDATKTASADYLNDTVSSGG 60

Query: 61  TQSQANDENIGKEVQHLKYIPFSASPPVGEHLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120
           TQSQ NDENIGKEVQHLKYIPFSASPPVGE LDLNSQMELVGHSIVLTSYPFSDAQYCQM
Sbjct: 61  TQSQGNDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSYPFSDAQYCQM 120

Query: 121 LTSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180
           LTS GPQST PH YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK
Sbjct: 121 LTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATTEEDINSGANHSTKAVSEAGS 240
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISN   EE INSGANHSTK VSEAGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVSEAGS 240

Query: 241 NYMATDENGIKDTLDEEGREFMTQNMQITHAFFNGKSNGLGLSTYNSQLADVEGGHLDQP 300
            YMA DENGIKDTL+EE +EFMTQN+QIT AFFNGK NG G+STY SQLADVEGGHLDQP
Sbjct: 241 KYMAADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP 300

Query: 301 HESMQVNGAPQRAIPI 317
           HESMQVNGAPQRAIPI
Sbjct: 301 HESMQVNGAPQRAIPI 316

[Close]

BLAST of Lcy05g004380 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 141.7 bits (356), Expect = 9.9e-34
Identity = 103/261 (39.46%), Postives = 145/261 (55.56%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHG-----SGNNTIAGEDATKTSSAEYLNVT 60
           M SK ++   +V       + S+  S   WH      + N+++   D +  S A    + 
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIA----LA 65

Query: 61  VTSGGTQSQANDENIGKEVQHLKYIPFSASPPVGEHLDLNSQM------------ELVGH 120
           + S G++S +N +N   +   +   P SA    G++ D N +             +LVGH
Sbjct: 66  LESNGSKSPSNRDNTVNKESQVTTSPQSA----GDYSDKNQESLHHGITQPPPHPQLVGH 125

Query: 121 SI-VLTSYPFSDAQYCQMLTSYG--PQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYH 180
           ++   +S P+ D  Y  ++ +YG  P   +P + G+ H+RMPLP EM +EPV+VNAKQY 
Sbjct: 126 TVGWASSNPYQDPYYAGVMGAYGHHPLGFVP-YGGMPHSRMPLPPEMAQEPVFVNAKQYQ 185

Query: 181 GILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNATT 240
            ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK N   S    
Sbjct: 186 AILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRF--AKKTNTEASKRKA 245

Query: 241 EEDINSGANHSTKAVSEAGSN 242
           EE  N    H T++ S + S+
Sbjct: 246 EEKSN---GHVTQSPSSSNSD 252

[Close]

BLAST of Lcy05g004380 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 133.3 bits (334), Expect = 3.5e-31
Identity = 103/280 (36.79%), Postives = 137/280 (48.93%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTI----AGEDATKTSSAEYLNVT- 60
           M SKP   ++   +    + Q   Y+EPWW  +    +         + +SS +  N + 
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 61  ---VTSGGTQSQANDENIG--KEVQ------HLKYIPFSASPPVGEHLDLNSQ-----ME 120
              V S       N EN G  K+ Q       +       + P     +++ Q      E
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPE 120

Query: 121 LVGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQ 180
           LVGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQ
Sbjct: 121 LVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQ 180

Query: 181 YHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNA 240
           Y GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S  
Sbjct: 181 YEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF--AKK-----SEV 240

Query: 241 TTEEDINSGANHSTKAVSEAGSNYMATDENGIKDTLDEEG 259
              ED          A + +GS  + TD N   +TL+  G
Sbjct: 241 EAGEDAGGRDRERGSATNSSGSEQVETDSN---ETLNSSG 270

[Close]

BLAST of Lcy05g004380 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 133.3 bits (334), Expect = 3.5e-31
Identity = 103/280 (36.79%), Postives = 137/280 (48.93%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTI----AGEDATKTSSAEYLNVT- 60
           M SKP   ++   +    + Q   Y+EPWW  +    +         + +SS +  N + 
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 61  ---VTSGGTQSQANDENIG--KEVQ------HLKYIPFSASPPVGEHLDLNSQ-----ME 120
              V S       N EN G  K+ Q       +       + P     +++ Q      E
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPE 120

Query: 121 LVGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQ 180
           LVGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQ
Sbjct: 121 LVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQ 180

Query: 181 YHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNA 240
           Y GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S  
Sbjct: 181 YEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF--AKK-----SEV 240

Query: 241 TTEEDINSGANHSTKAVSEAGSNYMATDENGIKDTLDEEG 259
              ED          A + +GS  + TD N   +TL+  G
Sbjct: 241 EAGEDAGGRDRERGSATNSSGSEQVETDSN---ETLNSSG 270

[Close]

BLAST of Lcy05g004380 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 132.9 bits (333), Expect = 4.6e-31
Identity = 103/279 (36.92%), Postives = 136/279 (48.75%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTI----AGEDATKTSSAEYLNVT- 60
           M SKP   ++   +    + Q   Y+EPWW  +    +         + +SS +  N + 
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 61  ---VTSGGTQSQANDENIG--KEVQ-----HLKYIPFSASPPVGEHLDLNSQ-----MEL 120
              V S       N EN G  K+ Q              + P     +++ Q      EL
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPPEL 120

Query: 121 VGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQY 180
           VGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQY
Sbjct: 121 VGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQY 180

Query: 181 HGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNAT 240
            GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S   
Sbjct: 181 EGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF--AKK-----SEVE 240

Query: 241 TEEDINSGANHSTKAVSEAGSNYMATDENGIKDTLDEEG 259
             ED          A + +GS  + TD N   +TL+  G
Sbjct: 241 AGEDAGGRDRERGSATNSSGSEQVETDSN---ETLNSSG 269

[Close]

BLAST of Lcy05g004380 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 132.9 bits (333), Expect = 4.6e-31
Identity = 103/279 (36.92%), Postives = 136/279 (48.75%), Query Frame = 0


Query: 1   MPSKPENVDQRVADGAKYLLQSTKYSEPWWHGSGNNTI----AGEDATKTSSAEYLNVT- 60
           M SKP   ++   +    + Q   Y+EPWW  +    +         + +SS +  N + 
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 61  ---VTSGGTQSQANDENIG--KEVQ-----HLKYIPFSASPPVGEHLDLNSQ-----MEL 120
              V S       N EN G  K+ Q              + P     +++ Q      EL
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPPEL 120

Query: 121 VGHSIVLTSYPFSDAQYCQMLTSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQY 180
           VGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQY
Sbjct: 121 VGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQY 180

Query: 181 HGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNAT 240
            GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S   
Sbjct: 181 EGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF--AKK-----SEVE 240

Query: 241 TEEDINSGANHSTKAVSEAGSNYMATDENGIKDTLDEEG 259
             ED          A + +GS  + TD N   +TL+  G
Sbjct: 241 AGEDAGGRDRERGSATNSSGSEQVETDSN---ETLNSSG 269

The following BLAST results are available for this feature:

BLAST of Lcy05g004380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q945M9	1.4e-32	39.46	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LXV5	4.9e-30	36.79	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	1.9e-26	50.71	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	1.3e-25	41.84	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9M9X4	1.1e-24	35.55	Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Lcy05g004380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CED9	5.3e-160	90.22	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103499928 P...	[more]
A0A5D3CGW1	5.3e-160	90.22	Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0K612	1.2e-159	90.22	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_7G42813...	[more]
A0A6J1GNB7	8.4e-158	89.24	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1D8S0	2.3e-155	87.19	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Lcy05g004380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461297.1	1.1e-159	90.22	PREDICTED: nuclear transcription factor Y subunit A-9-like [Cucumis melo] >XP_00...	[more]
XP_004135933.1	2.4e-159	90.22	nuclear transcription factor Y subunit A-4 isoform X1 [Cucumis sativus] >KGN4512...	[more]
XP_023547827.1	7.8e-158	88.92	nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp...	[more]
KAG7014245.1	1.7e-157	89.24	Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022953565.1	1.7e-157	89.24	nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita moschata] ...	[more]

BLAST of Lcy05g004380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20910.1	9.9e-34	39.46	nuclear factor Y, subunit A9	[more]
AT5G12840.1	3.5e-31	36.79	nuclear factor Y, subunit A1	[more]
AT5G12840.3	3.5e-31	36.79	nuclear factor Y, subunit A1	[more]
AT5G12840.2	4.6e-31	36.92	nuclear factor Y, subunit A1	[more]
AT5G12840.4	4.6e-31	36.92	nuclear factor Y, subunit A1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 151..173 score: 77.29 coord: 182..205 score: 81.71
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 147..208 e-value: 7.9E-38 score: 141.7
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 150..205 e-value: 1.1E-26 score: 93.1
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 71..314
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 148..208 score: 39.152382
None	No IPR available	GENE3D	6.10.250.2430		coord: 148..209 e-value: 8.3E-32 score: 111.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..317
None	No IPR available	PANTHER	PTHR12632:SF57	TRANSCRIPTION FACTOR Y SUBUNIT A-1, PUTATIVE-RELATED	coord: 71..314
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 153..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g004380.1	Lcy05g004380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity