Lcy05g004310 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g004310
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	E3 ubiquitin ligase BIG BROTHER
Location	Chr05: 3836109 .. 3839406 (+)
RNA-Seq Expression	Lcy05g004310
Synteny	Lcy05g004310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTCTATTTTCTATTTTTTTTGTTCCTTTTTTTGTTCTGTTTTTATTGTGAATATTATGAGGATTCTAAGGAATACTGGGATCTGTACCTGTTTATTTTTTGCTCATTTGTCTGCATTTATCTGATTCTTAGGATTCTCTTACATCTTTTATGCTCATTTGTCTACATTTGTCTAATTCCTCAGATTTTTCCTCTGTCAGAAGGTGAAGAGTTTTCTTGGGGGAGTTTCTGTTTGGTTGTCCAGAAAGGAAAATCAAAGGATTTTGCCTTGTTTTTTCTTTTTGGGACAAAAGAAATTCAAATGTAAGTTTGTTTTTGGTTTTGTGTAATGTAATATATGTTCTTTAAGTTGTTGGGTGTTTTTAGGGCCTATTTCCTATTTCATTGGAACAGAAAATTATAAATCTGCTATTTCCTTCAGCTTTCTCAGCTTTTCCCCCAAGTTTTCTATGCAACCAAACAGATGGTTGTGGATAATTTCATTCTGGGTCAAGTTTAATATATGGAAAAAACATCACATTTTGCTTAAAATTCCAAAGCTTTGTCAATGTAGGTTTCAAGTTCATTTCATGTTTCCTGTTCCTTTTTTGTGTTTATGCAGTTAATTTTGCAAATTCTAGTGTTGATTGCTGTTTAAGATGAATGAGGATAGACAAATGGAGCTACATTACGTCGATACGGGCTTCCCCTACACGGTTACGGAGAGCTTCATGGACTTCTTTGAAGGGCTCCATCAACATCAAGTGCCTGCTTATGGCAATGCTGTGCCAATGCTTGATCAGGTAACGCAGCGGCCATGAAAAACCGATGAAATTTTTCGATACACGAATTCGAGTTTTGTTAGTTGTGAGAGTAATTAGTATTGTAAATGTATGGTAATTTGTCTCTCAGGGAAATGCATACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCTGATCATGGGAACACGTATTACGGCCATTCGGAGGAAAGTCACCATTTACCACCATCCATGGATGTTGGTGAAAGGGAATGGGAGTATCCTTCAACGATGAATGTCGAAATCCCCGAACCGACATATGTGCCATCTGTGGAGGAGGATGTTGGAGATGCTCATTCTATACCAGAAGAATGTAAGTGTTGACAAATCTGATATGAAATGGAGTCTGTTTATTTCATACTTTCAAAAGCTAATATAGAGTCTCTCTTACCAAAGCGTCGAGTTGATTTGTCGAAAATATTTGAGAAACATAAAAATAGTGGATCTTATCAGCACTTTTTTACCTTGTTTTCCTGTTTTGTAGGTGATTTAAGCCATCAGGAGGAGACCAGTACTTCTCAAGTATGATGCCTTCTCCTTGATCTCACGATATGCCTCTTTTCTTGTTTGGAGCATCATCTACTTAATGCCTCTAATGAACTATGGCTTAATCAAAAAGTTGTTCGGGATCGTTTTACGTTATTCGTTTATTAATGAATAGGGGTACAACCGTATTATCATCAGAGGTTTTAGAATGTTCAAATGTTATCATACTGAAGTTATCATGTAGCTGATTGAATTTCTTTTCTCCTCAAGTTTCAGTTTCTCATGTCAAAATGTTTTTCTTTCTAGTTAGTTTTGTGCCTGACAGAACTGTTGATGCTTTTGAACTATTAGGATAGGTACTTTTTCGGTTTAAAACTCATTGAATCCGTCTTCTTTTGTTCGTCTCTTCAGGTTATATGGCAAGATGAGGTTGATCCTGACCACATGACCTATGAGGTATGGTTTCAACTGTATCGTTTAGAAATCAAACCAGTTTTAGAACATGTTGTTTAAGAGAAGTTCTGTAGATCTGCAATTGAGTGGCTGTGTTGTTGTACACTTCAATCCGACGTTTTACCGAATCCGTGGTTTTCGTTTTGCTTTAGAGAAAAGGTTTTAGGCTCAATTATCAACAAGCCCCTGTTTTTCTTGTGGCCATATGGTTGGCTGTTAAATGAATGGGAGCCATAGAAGTTTACTGTGTAAAAAGAAAAGAACAATTGAACTGTCTTCAGCCATGACTGTGGATTATCTTACATGGCCTTACAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACAGAAAGTCGGGGTCTTTCCGAAGAACAAATAAGTTTGCTTCCGACTGCACGATGCAAGTTAACGAGCTTTTTCTCAAGAAAAAAGCCAGATGAAAGGTATGGTTTTGACATATGTTGCATTAGAATAATCTCGCTCGACGTTTGTTTTTGCTTTACTTGGACGTTATAGGAACATTCCTGTCGAAAGAACCTAGAATGATATATTGGTTATCGATTTGGCGTCATTATAAACGACATTTCCGATGAACGAGGATATACTACGTTGTCATAAAATGATGCTTGTTTCTGATATGCCTATTCTGAAATCATATGGGTCCAACTTTCCATCATAGTATGCAAGTTAATACAGTTAGGCATGTCAAACCTCTAACAACCGATACAAATGAGATAGTCAAATAAGATATGCTTTTCGAGTAGGATCATGTTCTTGGAGTTGCATCTTAGGTTGTTGACTGTTGATCTCGGTACCTTTTCGGTACGATATTTATTCTTCTTGGGGAATCTTGGTTTCAATATTTGATTGTACTTGTTTTGTTTTGACGACAGATGTGTGATTTGCCAAATGAGGTACAAGAGAGGGGACAAACAAATAAAATTGCCCTGCAAGCATTTCTACCACAACAAATGCATAACCAAATGGCTCACCATCAACAAAGTCAGTTATTTTCTTGAATCTCTCATGTCTTTTTACTCCCACCATTTCATTTCTGTTCTAACTTGCCTTTCATCTCGCTCGTGTTTATCAGATATGTCCGATCTGCAACATCGAGGTGTTCGGAGACGAAAGCACGAATGCATCGGGCAGCGATAACCGACAGTAGTAGATTTTGGAAGCTCTAACATTTTGCTCCTTGTTCATGTTTTCCCATTTTTGCCTTCTCACTTTCATTTCTCTCCCCATTTTGTACATCTCTACTTAACTAAGTTAATTAAGTACTCTAATCCTCAATCTCTCTCCCCCACACTTGCCTTATTTTCAAGAGAAAAAGAACTGTACCTTCTTTTAACTTGTCAACTGTTTAGCCTGAAGATTAAAGTCTAGTTACTTTCTTAGATTGAGATTAGCTTGTTTTCTAGTCATTTTTCGGTTAAGAGACGTTTTGAATCTGACCCAATTGTTCGAGTTACAGATTAGTTCAATCGAAGTGACTTTTGTTAGTGGTAGATGATGAGTTTGGTCCTTTGTTTCAAATTTTGTAAAAG

mRNA sequence

CTTTTCTATTTTCTATTTTTTTTGTTCCTTTTTTTGTTCTGTTTTTATTGTGAATATTATGAGGATTCTAAGGAATACTGGGATCTGTACCTGTTTATTTTTTGCTCATTTGTCTGCATTTATCTGATTCTTAGGATTCTCTTACATCTTTTATGCTCATTTGTCTACATTTGTCTAATTCCTCAGATTTTTCCTCTGTCAGAAGGTGAAGAGTTTTCTTGGGGGAGTTTCTGTTTGGTTGTCCAGAAAGGAAAATCAAAGGATTTTGCCTTGTTTTTTCTTTTTGGGACAAAAGAAATTCAAATTTAATTTTGCAAATTCTAGTGTTGATTGCTGTTTAAGATGAATGAGGATAGACAAATGGAGCTACATTACGTCGATACGGGCTTCCCCTACACGGTTACGGAGAGCTTCATGGACTTCTTTGAAGGGCTCCATCAACATCAAGTGCCTGCTTATGGCAATGCTGTGCCAATGCTTGATCAGGGAAATGCATACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCTGATCATGGGAACACGTATTACGGCCATTCGGAGGAAAGTCACCATTTACCACCATCCATGGATGTTGGTGAAAGGGAATGGGAGTATCCTTCAACGATGAATGTCGAAATCCCCGAACCGACATATGTGCCATCTGTGGAGGAGGATGTTGGAGATGCTCATTCTATACCAGAAGAATGTGATTTAAGCCATCAGGAGGAGACCAGTACTTCTCAAGTTATATGGCAAGATGAGGTTGATCCTGACCACATGACCTATGAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACAGAAAGTCGGGGTCTTTCCGAAGAACAAATAAGTTTGCTTCCGACTGCACGATGCAAGTTAACGAGCTTTTTCTCAAGAAAAAAGCCAGATGAAAGATGTGTGATTTGCCAAATGAGGTACAAGAGAGGGGACAAACAAATAAAATTGCCCTGCAAGCATTTCTACCACAACAAATGCATAACCAAATGGCTCACCATCAACAAAATATGTCCGATCTGCAACATCGAGGTGTTCGGAGACGAAAGCACGAATGCATCGGGCAGCGATAACCGACAGTAGTAGATTTTGGAAGCTCTAACATTTTGCTCCTTGTTCATGTTTTCCCATTTTTGCCTTCTCACTTTCATTTCTCTCCCCATTTTGTACATCTCTACTTAACTAAGTTAATTAAGTACTCTAATCCTCAATCTCTCTCCCCCACACTTGCCTTATTTTCAAGAGAAAAAGAACTGTACCTTCTTTTAACTTGTCAACTGTTTAGCCTGAAGATTAAAGTCTAGTTACTTTCTTAGATTGAGATTAGCTTGTTTTCTAGTCATTTTTCGGTTAAGAGACGTTTTGAATCTGACCCAATTGTTCGAGTTACAGATTAGTTCAATCGAAGTGACTTTTGTTAGTGGTAGATGATGAGTTTGGTCCTTTGTTTCAAATTTTGTAAAAG

Coding sequence (CDS)

ATGAATGAGGATAGACAAATGGAGCTACATTACGTCGATACGGGCTTCCCCTACACGGTTACGGAGAGCTTCATGGACTTCTTTGAAGGGCTCCATCAACATCAAGTGCCTGCTTATGGCAATGCTGTGCCAATGCTTGATCAGGGAAATGCATACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCTGATCATGGGAACACGTATTACGGCCATTCGGAGGAAAGTCACCATTTACCACCATCCATGGATGTTGGTGAAAGGGAATGGGAGTATCCTTCAACGATGAATGTCGAAATCCCCGAACCGACATATGTGCCATCTGTGGAGGAGGATGTTGGAGATGCTCATTCTATACCAGAAGAATGTGATTTAAGCCATCAGGAGGAGACCAGTACTTCTCAAGTTATATGGCAAGATGAGGTTGATCCTGACCACATGACCTATGAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACAGAAAGTCGGGGTCTTTCCGAAGAACAAATAAGTTTGCTTCCGACTGCACGATGCAAGTTAACGAGCTTTTTCTCAAGAAAAAAGCCAGATGAAAGATGTGTGATTTGCCAAATGAGGTACAAGAGAGGGGACAAACAAATAAAATTGCCCTGCAAGCATTTCTACCACAACAAATGCATAACCAAATGGCTCACCATCAACAAAATATGTCCGATCTGCAACATCGAGGTGTTCGGAGACGAAAGCACGAATGCATCGGGCAGCGATAACCGACAGTAG

Protein sequence

MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPMLDQGNAYWSMNMQCYKFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPSTMNVEIPEPTYVPSVEEDVGDAHSIPEECDLSHQEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDESTNASGSDNRQ

Homology

[Close]

BLAST of Lcy05g004310 vs. ExPASy Swiss-Prot
Match: Q8L649 (E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.2e-64
Identity = 125/249 (50.20%), Postives = 168/249 (67.47%), Query Frame = 0


Query: 1   MNEDRQ--MELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPMLDQGNAYWSMNMQ 60
           MN D +   + HY +TGFPY  T S+MDF+ G  Q  +  Y +A  M  Q N YW+MN  
Sbjct: 1   MNGDNRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPL-NYDHAATMHPQDNLYWTMNTN 60

Query: 61  CYKFGVSDHGN-TYYGHSEESHHLPPSMDVGEREWEYPSTMNV-EIPEPTYVPSVEEDVG 120
            YKFG S   N ++YG  + + HL   M +G   W+Y   +NV + PE T   SV+    
Sbjct: 61  AYKFGFSGSDNASFYGSYDMNDHL-SRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDT 120

Query: 121 DAHSIPEECDLSHQEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLL 180
           D HS  EEC ++++ +  + QV WQD++DPD MTYEEL++LGE+VGTESRGLS+E I  L
Sbjct: 121 DEHSEAEEC-IANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETL 180

Query: 181 PTARCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 240
           PT + K  S FSRK+  ERCVICQ++YK G++Q+ LPCKH YH++CI+KWL+INK+CP+C
Sbjct: 181 PTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVC 240

Query: 241 NIEVFGDES 246
           N EVFG+ S
Sbjct: 241 NSEVFGEPS 246

[Close]

BLAST of Lcy05g004310 vs. ExPASy Swiss-Prot
Match: Q9LT17 (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.5e-26
Identity = 61/121 (50.41%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 130 QEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSR 189
           ++E+ TSQ  W DE+DPD ++YEELL LG+ VGTESRGLS + I+ LP+ R K     ++
Sbjct: 225 EDESHTSQDAW-DEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGD--NQ 284

Query: 190 KKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDESTNAS 249
              +E CVIC++ Y+  +  I LPCKH YH++CI  WL INK+CP+C+ EV    ST+ S
Sbjct: 285 NGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEV----STSTS 338

Query: 250 G 251
           G
Sbjct: 345 G 338

[Close]

BLAST of Lcy05g004310 vs. ExPASy Swiss-Prot
Match: O49500 (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.2e-13
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 144 VDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKPDERCVICQMRY 203
           +D D+M+YEELL LGE +G  S GLSEE I  +       +S     +  E C +CQ  Y
Sbjct: 567 LDVDNMSYEELLALGERIGDVSTGLSEEVILKVMKQHKHTSSAAGSHQDMEPCCVCQEEY 626

Query: 204 KRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 237
             GD    L C H +H  C+ +WL +  +CPIC
Sbjct: 627 AEGDDLGTLGCGHEFHTACVKQWLMLKNLCPIC 659

[Close]

BLAST of Lcy05g004310 vs. ExPASy Swiss-Prot
Match: Q9ZQF9 (E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.8e-13
Identity = 44/100 (44.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 144 VDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT----SFFSRKKPDERCVIC 203
           +D D+M+YEELL LGE +G  S GLSEE I L    + K T    S     +  E C IC
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLSEEVI-LKAMKQHKHTSSSPSSVELHQNIEPCCIC 660

Query: 204 QMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240
           Q  Y  GD    L C H +H  CI +W+ I  +CPIC  E
Sbjct: 661 QEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699

[Close]

BLAST of Lcy05g004310 vs. ExPASy Swiss-Prot
Match: Q7XTV7 (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 7.5e-13
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 144 VDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKPDERCVICQMRY 203
           +D D+M+YEELL L E +G  S GLSEE+++ L   R   +        +E C ICQ  Y
Sbjct: 568 LDIDNMSYEELLALEERIGNVSTGLSEEEVTKLLKQRKFSSWRLEASVEEEPCCICQEEY 627

Query: 204 KRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 237
             GD    L C H +H  C+ +WL +   CPIC
Sbjct: 628 VDGDDLGTLDCGHDFHVGCVRQWLVVKNTCPIC 660

[Close]

BLAST of Lcy05g004310 vs. ExPASy TrEMBL
Match: A0A5D3CGQ8 (E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00890 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 6.4e-140
Identity = 239/254 (94.09%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 1   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPMLDQGNAYWSMNMQCY 60
           MNEDRQMELHY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVP+LDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYP-STMNVEIPEPTYVPSVEEDVGDAH 120
           KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYP S +NVEIPEP+Y PSVEEDV DAH
Sbjct: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDAH 120

Query: 121 SIPEECDLSHQEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180
           SIPEECDLSH+EETSTSQVIWQDE+DPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA
Sbjct: 121 SIPEECDLSHREETSTSQVIWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180

Query: 181 RCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240
           RCKLTSFFSRKK DERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE
Sbjct: 181 RCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240

Query: 241 VFGDESTNASGSDN 254
           VFGD STNAS SDN
Sbjct: 241 VFGDGSTNASASDN 254

[Close]

BLAST of Lcy05g004310 vs. ExPASy TrEMBL
Match: A0A1S3CED1 (E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499919 PE=4 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 2.4e-139
Identity = 238/254 (93.70%), Postives = 245/254 (96.46%), Query Frame = 0


Query: 1   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPMLDQGNAYWSMNMQCY 60
           MNEDRQMELHY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVP+LDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYP-STMNVEIPEPTYVPSVEEDVGDAH 120
           KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYP S +NVEIPEP+Y PSVEEDV DAH
Sbjct: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDAH 120

Query: 121 SIPEECDLSHQEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180
           SIPEECDLSH+EETSTSQV WQDE+DPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA
Sbjct: 121 SIPEECDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180

Query: 181 RCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240
           RCKLTSFFSRKK DERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE
Sbjct: 181 RCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240

Query: 241 VFGDESTNASGSDN 254
           VFGD STNAS SDN
Sbjct: 241 VFGDGSTNASASDN 254

[Close]

BLAST of Lcy05g004310 vs. ExPASy TrEMBL
Match: A0A0A0K8C4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428220 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 4.3e-136
Identity = 233/248 (93.95%), Postives = 239/248 (96.37%), Query Frame = 0


Query: 7   MELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPMLDQGNAYWSMNMQCYKFGVSD 66
           MELHY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVP+LDQGNAYWSMNMQCYKFGVSD
Sbjct: 1   MELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 60

Query: 67  HGNTYYGHSEESHHLPPSMDVGEREWEYP-STMNVEIPEPTYVPSVEEDVGDAHSIPEEC 126
           HGNTYYGHSEESHHLPPSMDVGEREWEYP S MNVEIPEP+Y PSVEEDV DAHSIPEEC
Sbjct: 61  HGNTYYGHSEESHHLPPSMDVGEREWEYPTSAMNVEIPEPSYAPSVEEDVVDAHSIPEEC 120

Query: 127 DLSHQEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTS 186
           DLSH+EETSTSQV WQDE+DPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTS
Sbjct: 121 DLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTS 180

Query: 187 FFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDES 246
           FFSRKK DERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGD S
Sbjct: 181 FFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGS 240

Query: 247 TNASGSDN 254
           TNAS SDN
Sbjct: 241 TNASASDN 248

[Close]

BLAST of Lcy05g004310 vs. ExPASy TrEMBL
Match: A0A6J1D3R4 (E3 ubiquitin ligase BIG BROTHER OS=Momordica charantia OX=3673 GN=LOC111017324 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 4.3e-136
Identity = 232/257 (90.27%), Postives = 242/257 (94.16%), Query Frame = 0


Query: 1   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPMLDQGNAYWSMNMQCY 60
           MNEDRQME+HY+DTGFPYT TESFMDFFEGLH HQVPAYGNA P+LDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMEVHYIDTGFPYTTTESFMDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPSTMNVEIPEPTYVPSVEEDVGDAHS 120
           KFGVSD GNTYYGHSEESHHLPPSMD+GER WEYPST+ VE PEPTY PSVEEDV DAH 
Sbjct: 61  KFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYPSTVTVENPEPTYAPSVEEDVVDAHF 120

Query: 121 IP-EECDLSHQ-EETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180
           IP EECD SHQ EETSTSQV+WQDE+DPDHMTYEELLDLGESVGT+SRGLSEEQISLLPT
Sbjct: 121 IPEEECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPT 180

Query: 181 ARCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI 240
           A+CKLTSFFSRKKP+ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI
Sbjct: 181 AKCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI 240

Query: 241 EVFGDESTNASGSDNRQ 256
           EVFGDE  NASGSDNRQ
Sbjct: 241 EVFGDEGVNASGSDNRQ 257

[Close]

BLAST of Lcy05g004310 vs. ExPASy TrEMBL
Match: A0A1S3CES7 (E3 ubiquitin ligase BIG BROTHER isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499919 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.2e-135
Identity = 232/248 (93.55%), Postives = 239/248 (96.37%), Query Frame = 0


Query: 7   MELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPMLDQGNAYWSMNMQCYKFGVSD 66
           MELHY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVP+LDQGNAYWSMNMQCYKFGVSD
Sbjct: 1   MELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 60

Query: 67  HGNTYYGHSEESHHLPPSMDVGEREWEYP-STMNVEIPEPTYVPSVEEDVGDAHSIPEEC 126
           HGNTYYGHSEESHHLPPSMDVGEREWEYP S +NVEIPEP+Y PSVEEDV DAHSIPEEC
Sbjct: 61  HGNTYYGHSEESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDAHSIPEEC 120

Query: 127 DLSHQEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTS 186
           DLSH+EETSTSQV WQDE+DPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTS
Sbjct: 121 DLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTS 180

Query: 187 FFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDES 246
           FFSRKK DERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGD S
Sbjct: 181 FFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGS 240

Query: 247 TNASGSDN 254
           TNAS SDN
Sbjct: 241 TNASASDN 248

[Close]

BLAST of Lcy05g004310 vs. NCBI nr
Match: XP_038899262.1 (E3 ubiquitin-protein ligase BIG BROTHER [Benincasa hispida] >XP_038899263.1 E3 ubiquitin-protein ligase BIG BROTHER [Benincasa hispida] >XP_038899264.1 E3 ubiquitin-protein ligase BIG BROTHER [Benincasa hispida])

HSP 1 Score: 511.5 bits (1316), Expect = 4.1e-141
Identity = 241/256 (94.14%), Postives = 247/256 (96.48%), Query Frame = 0


Query: 1   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPMLDQGNAYWSMNMQCY 60
           MNEDRQME+HY+DTGFPYTVTESFMDFFEGLHQHQVPAYGNAVP+LDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMEVHYIDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYP-STMNVEIPEPTYVPSVEEDVGDAH 120
           KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYP S  NVEIPEPTY PSVEEDV DAH
Sbjct: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPTSVANVEIPEPTYAPSVEEDVVDAH 120

Query: 121 SIPEECDLSHQEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180
           SIPEECDLSHQEETSTSQV WQDE+DPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA
Sbjct: 121 SIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180

Query: 181 RCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240
           R KLTSFFSRKKP+ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE
Sbjct: 181 RFKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240

Query: 241 VFGDESTNASGSDNRQ 256
           VFGD S NASG+DNRQ
Sbjct: 241 VFGDGSMNASGNDNRQ 256

[Close]

BLAST of Lcy05g004310 vs. NCBI nr
Match: TYK10442.1 (E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 506.5 bits (1303), Expect = 1.3e-139
Identity = 239/254 (94.09%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 1   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPMLDQGNAYWSMNMQCY 60
           MNEDRQMELHY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVP+LDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYP-STMNVEIPEPTYVPSVEEDVGDAH 120
           KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYP S +NVEIPEP+Y PSVEEDV DAH
Sbjct: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDAH 120

Query: 121 SIPEECDLSHQEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180
           SIPEECDLSH+EETSTSQVIWQDE+DPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA
Sbjct: 121 SIPEECDLSHREETSTSQVIWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180

Query: 181 RCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240
           RCKLTSFFSRKK DERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE
Sbjct: 181 RCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240

Query: 241 VFGDESTNASGSDN 254
           VFGD STNAS SDN
Sbjct: 241 VFGDGSTNASASDN 254

[Close]

BLAST of Lcy05g004310 vs. NCBI nr
Match: XP_011659453.1 (E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >XP_011659454.1 E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >KAE8646405.1 hypothetical protein Csa_015770 [Cucumis sativus])

HSP 1 Score: 506.1 bits (1302), Expect = 1.7e-139
Identity = 239/254 (94.09%), Postives = 245/254 (96.46%), Query Frame = 0


Query: 1   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPMLDQGNAYWSMNMQCY 60
           MNEDRQMELHY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVP+LDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYP-STMNVEIPEPTYVPSVEEDVGDAH 120
           KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYP S MNVEIPEP+Y PSVEEDV DAH
Sbjct: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPTSAMNVEIPEPSYAPSVEEDVVDAH 120

Query: 121 SIPEECDLSHQEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180
           SIPEECDLSH+EETSTSQV WQDE+DPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA
Sbjct: 121 SIPEECDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180

Query: 181 RCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240
           RCKLTSFFSRKK DERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE
Sbjct: 181 RCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240

Query: 241 VFGDESTNASGSDN 254
           VFGD STNAS SDN
Sbjct: 241 VFGDGSTNASASDN 254

[Close]

BLAST of Lcy05g004310 vs. NCBI nr
Match: XP_008461282.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo] >XP_008461283.1 PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo])

HSP 1 Score: 504.6 bits (1298), Expect = 5.0e-139
Identity = 238/254 (93.70%), Postives = 245/254 (96.46%), Query Frame = 0


Query: 1   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPMLDQGNAYWSMNMQCY 60
           MNEDRQMELHY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVP+LDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYP-STMNVEIPEPTYVPSVEEDVGDAH 120
           KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYP S +NVEIPEP+Y PSVEEDV DAH
Sbjct: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDAH 120

Query: 121 SIPEECDLSHQEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180
           SIPEECDLSH+EETSTSQV WQDE+DPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA
Sbjct: 121 SIPEECDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180

Query: 181 RCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240
           RCKLTSFFSRKK DERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE
Sbjct: 181 RCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240

Query: 241 VFGDESTNASGSDN 254
           VFGD STNAS SDN
Sbjct: 241 VFGDGSTNASASDN 254

[Close]

BLAST of Lcy05g004310 vs. NCBI nr
Match: XP_022148735.1 (E3 ubiquitin ligase BIG BROTHER [Momordica charantia])

HSP 1 Score: 493.8 bits (1270), Expect = 8.8e-136
Identity = 232/257 (90.27%), Postives = 242/257 (94.16%), Query Frame = 0


Query: 1   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPMLDQGNAYWSMNMQCY 60
           MNEDRQME+HY+DTGFPYT TESFMDFFEGLH HQVPAYGNA P+LDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMEVHYIDTGFPYTTTESFMDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPSTMNVEIPEPTYVPSVEEDVGDAHS 120
           KFGVSD GNTYYGHSEESHHLPPSMD+GER WEYPST+ VE PEPTY PSVEEDV DAH 
Sbjct: 61  KFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYPSTVTVENPEPTYAPSVEEDVVDAHF 120

Query: 121 IP-EECDLSHQ-EETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180
           IP EECD SHQ EETSTSQV+WQDE+DPDHMTYEELLDLGESVGT+SRGLSEEQISLLPT
Sbjct: 121 IPEEECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPT 180

Query: 181 ARCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI 240
           A+CKLTSFFSRKKP+ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI
Sbjct: 181 AKCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI 240

Query: 241 EVFGDESTNASGSDNRQ 256
           EVFGDE  NASGSDNRQ
Sbjct: 241 EVFGDEGVNASGSDNRQ 257

[Close]

BLAST of Lcy05g004310 vs. TAIR 10
Match: AT3G63530.1 (RING/U-box superfamily protein )

HSP 1 Score: 246.5 bits (628), Expect = 2.3e-65
Identity = 125/249 (50.20%), Postives = 168/249 (67.47%), Query Frame = 0


Query: 1   MNEDRQ--MELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPMLDQGNAYWSMNMQ 60
           MN D +   + HY +TGFPY  T S+MDF+ G  Q  +  Y +A  M  Q N YW+MN  
Sbjct: 1   MNGDNRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPL-NYDHAATMHPQDNLYWTMNTN 60

Query: 61  CYKFGVSDHGN-TYYGHSEESHHLPPSMDVGEREWEYPSTMNV-EIPEPTYVPSVEEDVG 120
            YKFG S   N ++YG  + + HL   M +G   W+Y   +NV + PE T   SV+    
Sbjct: 61  AYKFGFSGSDNASFYGSYDMNDHL-SRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDT 120

Query: 121 DAHSIPEECDLSHQEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLL 180
           D HS  EEC ++++ +  + QV WQD++DPD MTYEEL++LGE+VGTESRGLS+E I  L
Sbjct: 121 DEHSEAEEC-IANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETL 180

Query: 181 PTARCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 240
           PT + K  S FSRK+  ERCVICQ++YK G++Q+ LPCKH YH++CI+KWL+INK+CP+C
Sbjct: 181 PTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVC 240

Query: 241 NIEVFGDES 246
           N EVFG+ S
Sbjct: 241 NSEVFGEPS 246

[Close]

BLAST of Lcy05g004310 vs. TAIR 10
Match: AT3G63530.2 (RING/U-box superfamily protein )

HSP 1 Score: 246.5 bits (628), Expect = 2.3e-65
Identity = 125/249 (50.20%), Postives = 168/249 (67.47%), Query Frame = 0


Query: 1   MNEDRQ--MELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPMLDQGNAYWSMNMQ 60
           MN D +   + HY +TGFPY  T S+MDF+ G  Q  +  Y +A  M  Q N YW+MN  
Sbjct: 1   MNGDNRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPL-NYDHAATMHPQDNLYWTMNTN 60

Query: 61  CYKFGVSDHGN-TYYGHSEESHHLPPSMDVGEREWEYPSTMNV-EIPEPTYVPSVEEDVG 120
            YKFG S   N ++YG  + + HL   M +G   W+Y   +NV + PE T   SV+    
Sbjct: 61  AYKFGFSGSDNASFYGSYDMNDHL-SRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDT 120

Query: 121 DAHSIPEECDLSHQEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLL 180
           D HS  EEC ++++ +  + QV WQD++DPD MTYEEL++LGE+VGTESRGLS+E I  L
Sbjct: 121 DEHSEAEEC-IANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETL 180

Query: 181 PTARCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 240
           PT + K  S FSRK+  ERCVICQ++YK G++Q+ LPCKH YH++CI+KWL+INK+CP+C
Sbjct: 181 PTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVC 240

Query: 241 NIEVFGDES 246
           N EVFG+ S
Sbjct: 241 NSEVFGEPS 246

[Close]

BLAST of Lcy05g004310 vs. TAIR 10
Match: AT3G19910.1 (RING/U-box superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 3.2e-27
Identity = 61/121 (50.41%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 130 QEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSR 189
           ++E+ TSQ  W DE+DPD ++YEELL LG+ VGTESRGLS + I+ LP+ R K     ++
Sbjct: 225 EDESHTSQDAW-DEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGD--NQ 284

Query: 190 KKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDESTNAS 249
              +E CVIC++ Y+  +  I LPCKH YH++CI  WL INK+CP+C+ EV    ST+ S
Sbjct: 285 NGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEV----STSTS 338

Query: 250 G 251
           G
Sbjct: 345 G 338

[Close]

BLAST of Lcy05g004310 vs. TAIR 10
Match: AT5G52140.1 (RING/U-box superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 5.3e-22
Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 145 DPDHMTYEELLDLGESVGTESRGLSEEQISLLPTAR--CKLTSFF---SRKK---PDERC 204
           DP++MTYEEL +LG+SVG   +GLS+E+IS L T +   K  S++    +KK    D +C
Sbjct: 175 DPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMKKKFVADDSQC 234

Query: 205 VICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVF 242
            IC M Y +GDK   LPCKH YH  CI++WL  NK+C IC  EV+
Sbjct: 235 SICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEVY 279

[Close]

BLAST of Lcy05g004310 vs. TAIR 10
Match: AT3G47180.1 (RING/U-box superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 8.5e-20
Identity = 63/188 (33.51%), Postives = 95/188 (50.53%), Query Frame = 0


Query: 65  SDHGNTYYGHSEESHHLPPSM--------------DVGEREWEYPSTMNVEIPEPTYVPS 124
           +   N+++ H+   H   PSM              ++ E  +EY  +    + E   +  
Sbjct: 32  ASQANSHFAHA--MHDSSPSMISMIESDEESEDEEEINENYYEYFDSNGFGVDEDE-INE 91

Query: 125 VEEDVGDAHSIPEECDLSHQEETSTSQVIWQDEVDPDHMTYEELLDLGESVGTESRGLSE 184
             ED     ++ EE D   +E          DE+DPD ++YEEL+ LG+ +G E+RGL+ 
Sbjct: 92  FLEDQESNSNLEEEDDFLEEE----------DEIDPDQLSYEELIALGDFIGVENRGLTP 151

Query: 185 EQISLLPTARCKLTSFFSRKKPD-ERCVICQMRYKRGDKQIKL-PCKHFYHNKCITKWLT 237
            +IS    A    T  FS  K + +RCV+CQM ++  +  + L PC H YH++CITKWL 
Sbjct: 152 IEISTCLNAS---TYVFSHNKNEIDRCVVCQMEFEERESLVVLRPCDHPYHSECITKWLE 203

The following BLAST results are available for this feature:

BLAST of Lcy05g004310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L649	3.2e-64	50.20	E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE...	[more]
Q9LT17	4.5e-26	50.41	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR P...	[more]
O49500	1.2e-13	40.86	E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV...	[more]
Q9ZQF9	5.8e-13	44.00	E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV...	[more]
Q7XTV7	7.5e-13	40.86	Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Lcy05g004310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CGQ8	6.4e-140	94.09	E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CED1	2.4e-139	93.70	E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034999...	[more]
A0A0A0K8C4	4.3e-136	93.95	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428220 P...	[more]
A0A6J1D3R4	4.3e-136	90.27	E3 ubiquitin ligase BIG BROTHER OS=Momordica charantia OX=3673 GN=LOC111017324 P...	[more]
A0A1S3CES7	1.2e-135	93.55	E3 ubiquitin ligase BIG BROTHER isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034999...	[more]

BLAST of Lcy05g004310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899262.1	4.1e-141	94.14	E3 ubiquitin-protein ligase BIG BROTHER [Benincasa hispida] >XP_038899263.1 E3 u...	[more]
TYK10442.1	1.3e-139	94.09	E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011659453.1	1.7e-139	94.09	E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >XP_011659454.1 E3 ubi...	[more]
XP_008461282.1	5.0e-139	93.70	PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo] >XP_0084612...	[more]
XP_022148735.1	8.8e-136	90.27	E3 ubiquitin ligase BIG BROTHER [Momordica charantia]	[more]

BLAST of Lcy05g004310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63530.1	2.3e-65	50.20	RING/U-box superfamily protein	[more]
AT3G63530.2	2.3e-65	50.20	RING/U-box superfamily protein	[more]
AT3G19910.1	3.2e-27	50.41	RING/U-box superfamily protein	[more]
AT5G52140.1	5.3e-22	49.52	RING/U-box superfamily protein	[more]
AT3G47180.1	8.5e-20	33.51	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 196..236 e-value: 1.7E-4 score: 30.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 195..237 e-value: 1.5E-11 score: 44.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 196..237 score: 11.456568
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 158..241 e-value: 9.1E-18 score: 65.7
None	No IPR available	PANTHER	PTHR46400:SF3	E3 UBIQUITIN-PROTEIN LIGASE BIG BROTHER	coord: 1..246
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 191..242
IPR033276	E3 ubiquitin-protein ligase BIG BROTHER	PANTHER	PTHR46400	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g004310.1	Lcy05g004310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048437	floral organ development
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0046621	negative regulation of organ growth
biological_process	GO:1900057	positive regulation of leaf senescence
biological_process	GO:0051865	protein autoubiquitination
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0031624	ubiquitin conjugating enzyme binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity