Lcy05g003870 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g003870
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Oxidoreductase/transition metal ion-binding protein
Location	Chr05: 3473493 .. 3474480 (+)
RNA-Seq Expression	Lcy05g003870
Synteny	Lcy05g003870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCAAACCAAACCAAAAACCAACACACACCATTTCCTAAATCTCCTCAGAAGCTCCCAAACCGCCGTCCATGGCTGCCGACGGAAGCTCCTCCGCCTCAAATTCCCACTCTCAGCCCACTTTTCCCCTTCATCTCTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTGGTACTCCAACTACGAGTCCGCCGTCGAAGGCGTTTTCGATCAACTCAAGCTCCTCCTCATCGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCTAATGCCGAAAACGGCCGCCTCCCATCCCTTGTCCCCCTACCGGAAAAGGACTCGCTCCACCGCGCTGGAGGGACGCCGTGGGGCGTCGGGTTCTTGTTGGTTCTTCTCCTTTTCATGATCTCTTATCAGTCTTACTTCCAAGAACGGTGGTTTCCTCTCTTGAGTCGATGATCGGCCCGACGATCCATCGTCGGATGATACTACGGCAGGTTTGAGTGATTGTTTATTGGAAAGTTCGATCTGTCGTTTCGTCGTCGTCAAACAATACTTTTTTGATTGGACAAAAGAAATAATTTACTGTATCTAGCATAGTTTATTTTCTTTCTCTAAGAAAATATCTTATCCCGATTAGAAGTAGAAAATTTCTATTGTCTGGTCAGTAGAAAAGTATTGTCCGTTCGAGCCCTTAGTATACTCGTTCTATTTGTTTTTGTTGAAGAAGAGTTTGGCTAGGGATGTGTCGGATCTTGTGATGTAATATTTGTTTGTGTCAATTATTAATGTAATTAGCTCTTTTCTTTTTTTCCCTTCTGATTTTTGATGGAATCCTATGCGTAGATGGAGGCTTTATATAAAGTAATTGTTCTAGTGGCTTCTAAAATTTTCAAGTCTCCCCATTGTAATATTTTATATCCCAACAGTTCTTCACTTTCTTCTTTTTCCACACACATATATAATAAAGTGCTCTTTAAAACCCTGGATTTA

mRNA sequence

CACCAAACCAAACCAAAAACCAACACACACCATTTCCTAAATCTCCTCAGAAGCTCCCAAACCGCCGTCCATGGCTGCCGACGGAAGCTCCTCCGCCTCAAATTCCCACTCTCAGCCCACTTTTCCCCTTCATCTCTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTGGTACTCCAACTACGAGTCCGCCGTCGAAGGCGTTTTCGATCAACTCAAGCTCCTCCTCATCGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCTAATGCCGAAAACGGCCGCCTCCCATCCCTTGTCCCCCTACCGGAAAAGGACTCGCTCCACCGCGCTGGAGGGACGCCGTGGGGCGTCGGGTTCTTGTTGGTTCTTCTCCTTTTCATGATCTCTTATCAGTCTTACTTCCAAGAACGGTGGTTTCCTCTCTTGAGTCGATGATCGGCCCGACGATCCATCGTCGGATGATACTACGGCAGGTTTGAGTGATTGTTTATTGGAAAGTTCGATCTGTCGTTTCGTCGTCGTCAAACAATACTTTTTTGATTGGACAAAAGAAATAATTTACTGTATCTAGCATAGTTTATTTTCTTTCTCTAAGAAAATATCTTATCCCGATTAGAAGTAGAAAATTTCTATTGTCTGGTCAGTAGAAAAGTATTGTCCGTTCGAGCCCTTAGTATACTCGTTCTATTTGTTTTTGTTGAAGAAGAGTTTGGCTAGGGATGTGTCGGATCTTGTGATGTAATATTTGTTTGTGTCAATTATTAATGTAATTAGCTCTTTTCTTTTTTTCCCTTCTGATTTTTGATGGAATCCTATGCGTAGATGGAGGCTTTATATAAAGTAATTGTTCTAGTGGCTTCTAAAATTTTCAAGTCTCCCCATTGTAATATTTTATATCCCAACAGTTCTTCACTTTCTTCTTTTTCCACACACATATATAATAAAGTGCTCTTTAAAACCCTGGATTTA

Coding sequence (CDS)

ATGGCTGCCGACGGAAGCTCCTCCGCCTCAAATTCCCACTCTCAGCCCACTTTTCCCCTTCATCTCTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTGGTACTCCAACTACGAGTCCGCCGTCGAAGGCGTTTTCGATCAACTCAAGCTCCTCCTCATCGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCTAATGCCGAAAACGGCCGCCTCCCATCCCTTGTCCCCCTACCGGAAAAGGACTCGCTCCACCGCGCTGGAGGGACGCCGTGGGGCGTCGGGTTCTTGTTGGTTCTTCTCCTTTTCATGATCTCTTATCAGTCTTACTTCCAAGAACGGTGGTTTCCTCTCTTGAGTCGATGA

Protein sequence

MAADGSSSASNSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPSLVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLSR

Homology

[Close]

BLAST of Lcy05g003870 vs. ExPASy TrEMBL
Match: A0A6J1JW83 (uncharacterized protein LOC111488435 OS=Cucurbita maxima OX=3661 GN=LOC111488435 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.2e-58
Identity = 112/127 (88.19%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MAADGSSSASNSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSP 60
           MA +G SS +NS SQPTFPLHLCFFFLIL MFL+FSWYS YESAVEGVFDQLKLLLI+SP
Sbjct: 1   MAVNGDSSTTNSDSQPTFPLHLCFFFLILFMFLAFSWYSTYESAVEGVFDQLKLLLIISP 60

Query: 61  LLLLLLVHWLSNAENGRLPSLVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQER 120
           LLLLLLVHWLSN ENGRLP LVPLPEKDSLHRAGGTPWGVGF+LV+LLFMISYQSYFQER
Sbjct: 61  LLLLLLVHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFP+LSR
Sbjct: 121 WFPMLSR 127

[Close]

BLAST of Lcy05g003870 vs. ExPASy TrEMBL
Match: A0A6J1GPN5 (uncharacterized protein LOC111456323 OS=Cucurbita moschata OX=3662 GN=LOC111456323 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 8.8e-58
Identity = 113/127 (88.98%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MAADGSSSASNSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSP 60
           MA +G SS SNS SQPTFPLHLCFFFLIL MFL+FSW+S YESAVEGVFDQLKLLLIVSP
Sbjct: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLVHWLSNAENGRLPSLVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQER 120
           LLLLLL+HWLSN ENGRLP LVPLPEKDSLHRAGGTPWGVGF+LV+LLFMISYQSYFQER
Sbjct: 61  LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFPLLSR
Sbjct: 121 WFPLLSR 127

[Close]

BLAST of Lcy05g003870 vs. ExPASy TrEMBL
Match: A0A0A0K9W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429630 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.2e-56
Identity = 109/118 (92.37%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 10  SNSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHW 69
           +N+HSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVE VFDQLKLLLIVSPLLLLLLVHW
Sbjct: 2   ANTHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVHW 61

Query: 70  LSNAENGRLPSLVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLSR 128
           LSN ++G LPSL+PLPEKDSLHRAGGTPWGVGFLLVLLLFM+SYQSYFQERWFPLLSR
Sbjct: 62  LSNTKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR 119

[Close]

BLAST of Lcy05g003870 vs. ExPASy TrEMBL
Match: A0A1S3CE82 (uncharacterized protein LOC103499879 OS=Cucumis melo OX=3656 GN=LOC103499879 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.7e-56
Identity = 110/119 (92.44%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 9   ASNSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVH 68
           A+  HSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVE VFDQLKLLLIVSPLLLLLLVH
Sbjct: 2   ANTGHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVH 61

Query: 69  WLSNAENGRLPSLVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLSR 128
           WLSN +NG LPSL+PLPEK+SLHRAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLSR
Sbjct: 62  WLSNTKNGHLPSLIPLPEKNSLHRAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLSR 120

[Close]

BLAST of Lcy05g003870 vs. ExPASy TrEMBL
Match: A0A6J1H718 (uncharacterized protein LOC111460692 OS=Cucurbita moschata OX=3662 GN=LOC111460692 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.7e-54
Identity = 113/127 (88.98%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MAADGSSSASNSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSP 60
           MAA+G SSA+NSHSQPTFPLHLCFFFLILLMFLSFSWYSNYES VEGVFDQLKLLLIVSP
Sbjct: 1   MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLVHWLSNAENGRLPSLVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQER 120
           LLLLLLVHWLSNA N        LPEKDSLH AGGTPWGVGFLLVLLLFMISYQSYFQER
Sbjct: 61  LLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFPLLSR
Sbjct: 121 WFPLLSR 121

[Close]

BLAST of Lcy05g003870 vs. NCBI nr
Match: XP_038898802.1 (uncharacterized protein LOC120086305 [Benincasa hispida])

HSP 1 Score: 242.7 bits (618), Expect = 1.8e-60
Identity = 118/127 (92.91%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MAADGSSSASNSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSP 60
           MA++  SSA+NSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSP
Sbjct: 1   MASNEGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLVHWLSNAENGRLPSLVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQER 120
           LLLLL+VHWLSN ENGRLPSL+PLPE+DSLHRAGGTPWGVGFLLVLLLFMISYQSYFQER
Sbjct: 61  LLLLLVVHWLSNTENGRLPSLIPLPERDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFPLLSR
Sbjct: 121 WFPLLSR 127

[Close]

BLAST of Lcy05g003870 vs. NCBI nr
Match: XP_023548678.1 (uncharacterized protein LOC111807266 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.3 bits (599), Expect = 2.8e-58
Identity = 115/127 (90.55%), Postives = 120/127 (94.49%), Query Frame = 0


Query: 1   MAADGSSSASNSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSP 60
           MA +G SSASNS SQPTFPLHLCFFFLIL MFL+FSW+S YESAVEGVFDQLKLLLIVSP
Sbjct: 1   MAVNGDSSASNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLVHWLSNAENGRLPSLVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQER 120
           LLLLLLVHWLSN ENGRLP LVPLPEKDSLHRAGGTPWGVGF+LV+LLFMISYQSYFQER
Sbjct: 61  LLLLLLVHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFPLLSR
Sbjct: 121 WFPLLSR 127

[Close]

BLAST of Lcy05g003870 vs. NCBI nr
Match: XP_022991944.1 (uncharacterized protein LOC111488435 [Cucurbita maxima])

HSP 1 Score: 233.4 bits (594), Expect = 1.1e-57
Identity = 112/127 (88.19%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MAADGSSSASNSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSP 60
           MA +G SS +NS SQPTFPLHLCFFFLIL MFL+FSWYS YESAVEGVFDQLKLLLI+SP
Sbjct: 1   MAVNGDSSTTNSDSQPTFPLHLCFFFLILFMFLAFSWYSTYESAVEGVFDQLKLLLIISP 60

Query: 61  LLLLLLVHWLSNAENGRLPSLVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQER 120
           LLLLLLVHWLSN ENGRLP LVPLPEKDSLHRAGGTPWGVGF+LV+LLFMISYQSYFQER
Sbjct: 61  LLLLLLVHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFP+LSR
Sbjct: 121 WFPMLSR 127

[Close]

BLAST of Lcy05g003870 vs. NCBI nr
Match: XP_022953918.1 (uncharacterized protein LOC111456323 [Cucurbita moschata])

HSP 1 Score: 232.6 bits (592), Expect = 1.8e-57
Identity = 113/127 (88.98%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MAADGSSSASNSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSP 60
           MA +G SS SNS SQPTFPLHLCFFFLIL MFL+FSW+S YESAVEGVFDQLKLLLIVSP
Sbjct: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLVHWLSNAENGRLPSLVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQER 120
           LLLLLL+HWLSN ENGRLP LVPLPEKDSLHRAGGTPWGVGF+LV+LLFMISYQSYFQER
Sbjct: 61  LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFPLLSR
Sbjct: 121 WFPLLSR 127

[Close]

BLAST of Lcy05g003870 vs. NCBI nr
Match: KAG6575655.1 (E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 230.7 bits (587), Expect = 6.9e-57
Identity = 113/127 (88.98%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MAADGSSSASNSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSP 60
           MA +G SS SNS SQPTFPLHLCFFFLIL MFL+FSW+S YESAVEGVFDQLKLLLIVSP
Sbjct: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLVHWLSNAENGRLPSLVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQER 120
           LLLLLLVHWLSN ENGRLP LV LPEKDSLHRAGGTPWGVGF+LV+LLFMISYQSYFQER
Sbjct: 61  LLLLLLVHWLSNGENGRLPPLVSLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 128
           WFPLLSR
Sbjct: 121 WFPLLSR 127

[Close]

BLAST of Lcy05g003870 vs. TAIR 10
Match: AT2G31940.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 227 Blast hits to 227 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 141.0 bits (354), Expect = 6.7e-34
Identity = 69/116 (59.48%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 11  NSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWL 70
           +    P  PLHLC F LILLMF++ SWY++YE  +EG   Q KL L+ SPLLLLL VH+L
Sbjct: 4   DQEGSPPVPLHLCVFVLILLMFVTISWYASYEPVIEGFTYQFKLALMASPLLLLLAVHFL 63

Query: 71  SNAE--NGRLPSLVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQERWFPL 125
           S+ +   G + SL+ L E++SL+RAGGTPWGV F+LV L FM+SYQS FQERWFPL
Sbjct: 64  SDDQGVGGMMTSLIHLNERESLYRAGGTPWGVAFMLVFLFFMVSYQSQFQERWFPL 119

[Close]

BLAST of Lcy05g003870 vs. TAIR 10
Match: AT5G19875.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 127.1 bits (318), Expect = 1.0e-29
Identity = 61/103 (59.22%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 21  HLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRLPS 80
           HLCF F+++   LSF+WY N+ES +E   D LKL+ I +PL LLLLVH+ S    G L  
Sbjct: 21  HLCFLFIVVFFVLSFTWYLNFESIIEDTLDHLKLVFIFTPLFLLLLVHFFS----GGLSF 80

Query: 81  LVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQERWFP 124
            VP PE+DS+HRAG +PWGV  +LVL+LFM+SYQS FQERWFP
Sbjct: 81  YVPWPEQDSIHRAGSSPWGVAAVLVLILFMVSYQSDFQERWFP 119

[Close]

BLAST of Lcy05g003870 vs. TAIR 10
Match: AT2G21180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.2 bits (165), Expect = 5.6e-12
Identity = 44/126 (34.92%), Postives = 61/126 (48.41%), Query Frame = 0


Query: 7   SSASNSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLL 66
           SS  +S S    P  +     +  +FL  SWY + E A E   +Q+   L++ PL L++L
Sbjct: 8   SSILDSFSLSPLPYPVLLILAVASVFLLSSWYFSLEEAAESAEEQINFALLLIPLFLIVL 67

Query: 67  VHWLSNAEN-----------GRLPSLVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQS 122
           V WLS+ EN            R   + P    D     G +PWGV  L+VLLL ++ YQS
Sbjct: 68  VRWLSSMENPDALLGMFSSSRRTTYVSPGAGGD----GGSSPWGVAALIVLLLVLLQYQS 127

[Close]

BLAST of Lcy05g003870 vs. TAIR 10
Match: AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 2.9e-08
Identity = 38/109 (34.86%), Postives = 53/109 (48.62%), Query Frame = 0


Query: 19  PLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSPLLLLLLVHWLSNAENGRL 78
           PL L     I+ + L  S Y  Y+  VE     LKL ++  P+L + ++  LS       
Sbjct: 29  PLTLLALLAIISLLLFLSSYPRYKYEVEKTAANLKLFMLFLPILFVFVLVSLSFVHRLLF 88

Query: 79  PS--LVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLL 126
            S   V   +  SL   G  PWGV  +L+LLL ++S QSYF   W+P L
Sbjct: 89  KSSYSVRANQAKSLFGEGNFPWGVLLMLILLLLLVSKQSYFHSLWYPNL 137

[Close]

BLAST of Lcy05g003870 vs. TAIR 10
Match: AT3G06890.1 (unknown protein; Has 91 Blast hits to 91 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 7.8e-06
Identity = 21/59 (35.59%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 56  LIVSPLLLLLLVHWLSNAENGRLPSLVPLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQ 115
           L++ P++LLL + +LS+     + ++    E +S+HR  G+P GV   LVL+LF++ Y+
Sbjct: 58  LLLLPIILLLTIQFLSSERGSFVSAIFSTGEPESIHRVSGSPVGVALFLVLILFLLYYR 116

The following BLAST results are available for this feature:

BLAST of Lcy05g003870 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g003870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JW83	5.2e-58	88.19	uncharacterized protein LOC111488435 OS=Cucurbita maxima OX=3661 GN=LOC111488435...	[more]
A0A6J1GPN5	8.8e-58	88.98	uncharacterized protein LOC111456323 OS=Cucurbita moschata OX=3662 GN=LOC1114563...	[more]
A0A0A0K9W6	2.2e-56	92.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429630 PE=4 SV=1	[more]
A0A1S3CE82	3.7e-56	92.44	uncharacterized protein LOC103499879 OS=Cucumis melo OX=3656 GN=LOC103499879 PE=...	[more]
A0A6J1H718	2.7e-54	88.98	uncharacterized protein LOC111460692 OS=Cucurbita moschata OX=3662 GN=LOC1114606...	[more]

BLAST of Lcy05g003870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898802.1	1.8e-60	92.91	uncharacterized protein LOC120086305 [Benincasa hispida]	[more]
XP_023548678.1	2.8e-58	90.55	uncharacterized protein LOC111807266 [Cucurbita pepo subsp. pepo]	[more]
XP_022991944.1	1.1e-57	88.19	uncharacterized protein LOC111488435 [Cucurbita maxima]	[more]
XP_022953918.1	1.8e-57	88.98	uncharacterized protein LOC111456323 [Cucurbita moschata]	[more]
KAG6575655.1	6.9e-57	88.98	E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lcy05g003870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31940.1	6.7e-34	59.48	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembra...	[more]
AT5G19875.1	1.0e-29	59.22	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT2G21180.1	5.6e-12	34.92	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G42146.1	2.9e-08	34.86	unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bac...	[more]
AT3G06890.1	7.8e-06	35.59	unknown protein; Has 91 Blast hits to 91 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33306	EXPRESSED PROTEIN-RELATED-RELATED	coord: 12..127
None	No IPR available	PANTHER	PTHR33306:SF5	EXPRESSED PROTEIN-RELATED	coord: 12..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g003870.1	Lcy05g003870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane