Lcy05g001120 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g001120
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RNA-binding (RRM/RBD/RNP motifs) family protein
Location	Chr05: 1091222 .. 1093768 (+)
RNA-Seq Expression	Lcy05g001120
Synteny	Lcy05g001120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGGTTTCAGCGCGATTTTCTTAAGCCCTTTCTCTGTTAGGGTTTTACTCTGGCTGACAAGAAAAACAAAAAGAAATCCACTAGTTATCTCACAAGTCGATCGCAATTTTCATACATTGGCAGAAGAATTTCCAGTTTCAATGGCGGAAGAAAGGAATTCCAATGCTGACTTCGATGCTTACAATGGCGATGGTTTTCTCCAAATGTACGATCAACAGCAGCAGTTTGATTTGGGGAGTGAATTGGAACGAGGCAATGTTGATAGTACAGGAAGTGAGATGAAGCATTCGACGAGTCATTTTGATTCTTCTTCCAGTGGGTTAGTTTTTATGGTTCTTTTGTCGTTGTGTTTTCAAGAGGAACAGAGCAGTTTTATTTGGTTCTTCTGTAAATATATGCGTAATTTTTTGAGAATTGGTTTTGAATCGAACTAGTTGAAGCATCACATTTGGCTTTTTCTTATTTGGTAGCAAACTTTTTGTTGGAGGCGTTTCTTGGGAGACCACTGAAGGTAAATATAAATTTAGTAAGCTATTGATTACTGGGATGTGGGGTTACCCTAGAAAAAGGGGTTCTTTTGTTTGTTTGATTATTAATGCGTTTTGCATTATCGTCTTATGATGGCAGATGGATTCTCTGATATATTATCATTCTTAATCCTTCCTATGATGGTTTAAGTCCTCTCCAACGTCTAGTTAGGCATTGATCAACTCATTTATCTTTCTAGTGGATTGCTCTTCTGGTTATGATTCCTTTTATTTTGATTCCACATTTCCTTCATGTGCATCTTTGATTATTTTGCTATGAGTCTCGACAGGTGTCATTTGAAAATTCATAACATTTTTTTGCCTCCTTAGATGTATAAATCATTGGATTTATGCTCATTTTTATAATGCTGTAAATTTGGCCATTTGTCCATAGTTCAATTGGCGAAATACTAGTTAACTTTAAAGAGCCCTACTAGGGTTCAATGATCCCCATCTCCTTGGTCTTGTTAGGAAAAGAAAAATTGATCTTTCTTTTGTCACATTGCCATTGTGCTAATATGTTATTGTTTTCACGTTGGTCATTCTGAATTCACTGTCATCATCCTGTCATACATGTCTTGACAATTTTTTTTTTATTAATATTTGTTATTCAGAGACCTTTCGTGATTACTTTAGCAAGTATGGGGAAATAGCAGATTCAGTCATAATGATGGACAAACACACTGGAAGACCACGCGGGTTCGGTTTCGTAACATTCTCTGATCCTGCAGTTGCTGACGTGGTTCTGAAGAAAGACCATGTTATAGATGGCAGAGCGGTAACATGAATATCAGTTATTTTTGTAATCCTAAAATTGTAATCTGGATGATGGATAATGGAATAATTTTATATCACTCTCAGGTGGAAGTGAAGAGGACAGTTCCTAGGGCTGATATGAATGATAAATTGGTATCAAGAACAAAGAAAATTTTTGTTGGTGGGATACCACCTGCTTTGACCGAAGGTAATATGTCAGAAGTCAATATATTATTATTTTTTTTCTATTGATTGTTTTTTTTTTCCAGAATTAATATTAAATGAAAGATGCTCTGTTTGAATGTCTCATAACATTGCAGATGAGTTTAAGGATTACTTCTCTTCTTTTGGTAGCATCATTGAACACCAAATCATGATAGATTATAGAACGAAGCGGTCCAGAGGATTTGGATTTATCACTTTTGAAAGTGAAGAAGCAGTTGAAAATATCTTTGCTGGAGACAAAAGACATGAGCTTGGAGGCAAGCAGGTGAATGGGAAAAGGATTAAAAGCATAAAAATCTATTATTGTTTTGCTTGTATGAAAAATGTTTAAGAGATTGTTAACAGAATTTATGTACTTCAACATGATCAAAAGCAGGTGGAAATCAAGAAGGCTGTACCAAGAAGAGTTGCTTGTGATTTCAGTAGTAATACTGCACAGACTTCTTCAGGATATGACATGTATAGATGTGAAGGTTTATATGATGGTAAAATGGGCAGAGCTTTTGGAGGGTATGATATTTATGCTCCCTATGGCGGGTTCGGTGGAAACTATGCCAGTTTCTACAGTGCATACAGTTACGGTTTTGGTTATGGTGGTTCAATGTATATGAATGGTAGATATGGGATGAATGGATATGGCATCCCCGATGCCTATGGTTGTACAGCAGTTGGATATGGAAGTAATGGATATGGAAAAGGATATCCAGGAAATGGTGGTTCAATGCCTGAAAGATATCATCCATATTGGTATTGAACAAACTTTTCCTAGACGGTTTCTAGTGTGAAGCAAATGATGATTGATTTTGAACACGGGCACAAGTATCATTCATCGACATAGCTGTGCAGTTTGAGATTTTTTCCTTGTAATATAATTGTTGACTATCCTTCTTTTCTCTTTACTATTATTGTGGTTTTTTTTCTTGGGGAATATGAATCGATTTGATTGATAATGAAAGGATGGACATACTTCCTCTAAGATGTCATATGTTTGAATCTCCACCACGTGAAGTGGGGTCCAATATATGGAGATATTATGTGC

mRNA sequence

TCGGTTTCAGCGCGATTTTCTTAAGCCCTTTCTCTGTTAGGGTTTTACTCTGGCTGACAAGAAAAACAAAAAGAAATCCACTAGTTATCTCACAAGTCGATCGCAATTTTCATACATTGGCAGAAGAATTTCCAGTTTCAATGGCGGAAGAAAGGAATTCCAATGCTGACTTCGATGCTTACAATGGCGATGGTTTTCTCCAAATGTACGATCAACAGCAGCAGTTTGATTTGGGGAGTGAATTGGAACGAGGCAATGTTGATAGTACAGGAAGTGAGATGAAGCATTCGACGAGTCATTTTGATTCTTCTTCCAGTGGCAAACTTTTTGTTGGAGGCGTTTCTTGGGAGACCACTGAAGAGACCTTTCGTGATTACTTTAGCAAGTATGGGGAAATAGCAGATTCAGTCATAATGATGGACAAACACACTGGAAGACCACGCGGGTTCGGTTTCGTAACATTCTCTGATCCTGCAGTTGCTGACGTGGTTCTGAAGAAAGACCATGTTATAGATGGCAGAGCGGTGGAAGTGAAGAGGACAGTTCCTAGGGCTGATATGAATGATAAATTGGTATCAAGAACAAAGAAAATTTTTGTTGGTGGGATACCACCTGCTTTGACCGAAGATGAGTTTAAGGATTACTTCTCTTCTTTTGGTAGCATCATTGAACACCAAATCATGATAGATTATAGAACGAAGCGGTCCAGAGGATTTGGATTTATCACTTTTGAAAGTGAAGAAGCAGTTGAAAATATCTTTGCTGGAGACAAAAGACATGAGCTTGGAGGCAAGCAGGTGGAAATCAAGAAGGCTGTACCAAGAAGAGTTGCTTGTGATTTCAGTAGTAATACTGCACAGACTTCTTCAGGATATGACATGTATAGATGTGAAGGTTTATATGATGGTAAAATGGGCAGAGCTTTTGGAGGGTATGATATTTATGCTCCCTATGGCGGGTTCGGTGGAAACTATGCCAGTTTCTACAGTGCATACAGTTACGGTTTTGGTTATGGTGGTTCAATGTATATGAATGGTAGATATGGGATGAATGGATATGGCATCCCCGATGCCTATGGTTGTACAGCAGTTGGATATGGAAGTAATGGATATGGAAAAGGATATCCAGGAAATGGTGGTTCAATGCCTGAAAGATATCATCCATATTGGTATTGAACAAACTTTTCCTAGACGGTTTCTAGTGTGAAGCAAATGATGATTGATTTTGAACACGGGCACAAGTATCATTCATCGACATAGCTGTGCAGTTTGAGATTTTTTCCTTGTAATATAATTGTTGACTATCCTTCTTTTCTCTTTACTATTATTGTGGTTTTTTTTCTTGGGGAATATGAATCGATTTGATTGATAATGAAAGGATGGACATACTTCCTCTAAGATGTCATATGTTTGAATCTCCACCACGTGAAGTGGGGTCCAATATATGGAGATATTATGTGC

Coding sequence (CDS)

ATGGCGGAAGAAAGGAATTCCAATGCTGACTTCGATGCTTACAATGGCGATGGTTTTCTCCAAATGTACGATCAACAGCAGCAGTTTGATTTGGGGAGTGAATTGGAACGAGGCAATGTTGATAGTACAGGAAGTGAGATGAAGCATTCGACGAGTCATTTTGATTCTTCTTCCAGTGGCAAACTTTTTGTTGGAGGCGTTTCTTGGGAGACCACTGAAGAGACCTTTCGTGATTACTTTAGCAAGTATGGGGAAATAGCAGATTCAGTCATAATGATGGACAAACACACTGGAAGACCACGCGGGTTCGGTTTCGTAACATTCTCTGATCCTGCAGTTGCTGACGTGGTTCTGAAGAAAGACCATGTTATAGATGGCAGAGCGGTGGAAGTGAAGAGGACAGTTCCTAGGGCTGATATGAATGATAAATTGGTATCAAGAACAAAGAAAATTTTTGTTGGTGGGATACCACCTGCTTTGACCGAAGATGAGTTTAAGGATTACTTCTCTTCTTTTGGTAGCATCATTGAACACCAAATCATGATAGATTATAGAACGAAGCGGTCCAGAGGATTTGGATTTATCACTTTTGAAAGTGAAGAAGCAGTTGAAAATATCTTTGCTGGAGACAAAAGACATGAGCTTGGAGGCAAGCAGGTGGAAATCAAGAAGGCTGTACCAAGAAGAGTTGCTTGTGATTTCAGTAGTAATACTGCACAGACTTCTTCAGGATATGACATGTATAGATGTGAAGGTTTATATGATGGTAAAATGGGCAGAGCTTTTGGAGGGTATGATATTTATGCTCCCTATGGCGGGTTCGGTGGAAACTATGCCAGTTTCTACAGTGCATACAGTTACGGTTTTGGTTATGGTGGTTCAATGTATATGAATGGTAGATATGGGATGAATGGATATGGCATCCCCGATGCCTATGGTTGTACAGCAGTTGGATATGGAAGTAATGGATATGGAAAAGGATATCCAGGAAATGGTGGTTCAATGCCTGAAAGATATCATCCATATTGGTATTGA

Protein sequence

MAEERNSNADFDAYNGDGFLQMYDQQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSSGKLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVVLKKDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQTSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYASFYSAYSYGFGYGGSMYMNGRYGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY

Homology

[Close]

BLAST of Lcy05g001120 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.5e-48
Identity = 125/298 (41.95%), Postives = 169/298 (56.71%), Query Frame = 0


Query: 57  SSSGKLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADV 116
           S  GKLFVGG+SWET E+  R++F+ YGE++ +++M DK TGRPRGFGFV FSDP+V D 
Sbjct: 3   SDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDR 62

Query: 117 VLKKDHVIDGRAVEVKRTVPRADM---------------NDKLVSRTKKIFVGGIPPALT 176
           VL++ H ID R V+VKR + R +                     ++TKKIFVGG+PP LT
Sbjct: 63  VLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLT 122

Query: 177 EDEFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVE 236
           ++EF+ YF  +G + +  IM D  T R RGFGF++F+SE+AV+++      H+L GKQVE
Sbjct: 123 DEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVL-HKTFHDLSGKQVE 182

Query: 237 IKKAVPR--RVACDFSSNTAQTSSGYDMY-RCEGLYDGKMGRAFGGYDIYAPYGGFGGNY 296
           +K+A+P+         S     S GY  Y   E  YDG+M       + +  +   G   
Sbjct: 183 VKRALPKDANPGGGGRSMGGGGSGGYQGYGGNESSYDGRMDS-----NRFLQHQSVGNGL 242

Query: 297 ASFYSAYSYGFGYGGSMYMNGRYGMNGYGIPDAYGCTAVGYGSN---GYG-KGYPGNG 333
            S Y +  YG GYG     NG  G  GYG    Y  +A GYG+    GYG    PG G
Sbjct: 243 PS-YGSSGYGAGYG-----NGSNGA-GYGAYGGYTGSAGGYGAGATAGYGATNIPGAG 287

[Close]

BLAST of Lcy05g001120 vs. ExPASy Swiss-Prot
Match: Q99383 (Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HRP1 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 8.0e-42
Identity = 97/247 (39.27%), Postives = 148/247 (59.92%), Query Frame = 0


Query: 6   NSNADFDAYNGDGFLQMYDQQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSSGKLFVG 65
           N+NA     +G  + Q+     QF   S         T ++ + S +   S  S K+F+G
Sbjct: 106 NANASSAGPSGLPWEQLQQTMSQFQQPSSQSPPQQQVTQTKEERSKADL-SKESCKMFIG 165

Query: 66  GVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVVLKKDHVID 125
           G++W+TTE+  R+YF KYG + D  IM D  TGR RGFGF++F  P+  D V+K  H++D
Sbjct: 166 GLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILD 225

Query: 126 GRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQIMIDYR 185
           G+ ++ KR +PR D  DK    T KIFVGGI P +   EF+++FS +G+II+ Q+M+D  
Sbjct: 226 GKVIDPKRAIPR-DEQDK----TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKD 285

Query: 186 TKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQTSSGY 245
           T +SRGFGF+T++S +AV+ +   +K  +   +++EIK+A PR +    SSN    + G 
Sbjct: 286 TGQSRGFGFVTYDSADAVDRV-CQNKFIDFKDRKIEIKRAEPRHMQ-QKSSNNGGNNGGN 344

Query: 246 DMYRCEG 253
           +M R  G
Sbjct: 346 NMNRRGG 344

[Close]

BLAST of Lcy05g001120 vs. ExPASy Swiss-Prot
Match: O94432 (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC660.15 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.3e-41
Identity = 83/206 (40.29%), Postives = 130/206 (63.11%), Query Frame = 0


Query: 23  YDQQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSSGKLFVGGVSWETTEETFRDYFSK 82
           Y++ Q    GS     N D+        TS F +   GK+F+GG++WETT+++ RDYF +
Sbjct: 132 YNENQSALTGSGAMESNEDNA-----EETSPF-NREDGKMFIGGLNWETTDDSLRDYFEQ 191

Query: 83  YGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVVLKKDHVIDGRAVEVKRTVPRADMND 142
           +GE+ D  +M D  TGR RGFGF+TF +P   + V+ K+H +DG+ ++ KR +PR +   
Sbjct: 192 FGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLDGKIIDPKRAIPREEQ-- 251

Query: 143 KLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFESEEA 202
               +T K+FVGG+P   TE+EF+++F+ FG +++  +M+D  T R RGFGF+T+E+E A
Sbjct: 252 ---EKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESA 311

Query: 203 VENIFAGDKRHELGGKQVEIKKAVPR 229
           VE   +      + GK VE+K+A P+
Sbjct: 312 VEATMS-QPYITIHGKPVEVKRATPK 325

[Close]

BLAST of Lcy05g001120 vs. ExPASy Swiss-Prot
Match: Q9VVE5 (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=Rbp6 PE=2 SV=3)

HSP 1 Score: 169.5 bits (428), Expect = 6.7e-41
Identity = 102/260 (39.23%), Postives = 147/260 (56.54%), Query Frame = 0


Query: 20  LQMYDQQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSSGKLFVGGVSWETTEETFRDY 79
           ++   QQQQ +LG          + SE+         +  GK+F+GG+SW+T+ E+ RDY
Sbjct: 5   IEQQQQQQQVELG--------PCSPSEV--------PNDPGKMFIGGLSWQTSPESLRDY 64

Query: 80  FSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVVLKK-DHVIDGRAVEVKRTVPRA 139
           F +YG+I+++++M D  T R RGFGFVTFSDP   D VL +  H +DG+ V+ K   PR 
Sbjct: 65  FGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRR 124

Query: 140 DMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFE 199
             + K+V+RTKKIFVGG+    T ++ K YF  FG I +  +M D +T R RGFGF+TF+
Sbjct: 125 -AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQ 184

Query: 200 SEEAVENIFAGDKRHELGGKQVEIKKAVPRRV--ACDFSSNTAQTSSGYD--MYRCEGLY 259
           SE+ V+ +      HE+  K VE KKA P+ V    + +   A   S YD  M+    L 
Sbjct: 185 SEDVVDKV-CEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYDNIMWGLGTLP 244

Query: 260 DGKMGRAFGGYDIYAPYGGF 275
           +G    A+  Y     Y G+
Sbjct: 245 EGFPAAAYAAYAAGRGYSGY 246

[Close]

BLAST of Lcy05g001120 vs. ExPASy Swiss-Prot
Match: Q920Q6 (RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.7e-37
Identity = 112/316 (35.44%), Postives = 164/316 (51.90%), Query Frame = 0


Query: 40  VDSTGSEMKHSTSHFDSSSSGKLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGR 99
           +++ GS     +++      GK+F+GG+SW+T+ ++ RDYFSK+GEI + ++M D  T R
Sbjct: 1   MEANGSPGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR 60

Query: 100 PRGFGFVTFSDPAVADVVL-KKDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPP 159
            RGFGFVTF+DPA  D VL +  H +D + ++ K   PR     K+V+RTKKIFVGG+  
Sbjct: 61  SRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRR-AQPKMVTRTKKIFVGGLSA 120

Query: 160 ALTEDEFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGK 219
               ++ K YF  FG + +  +M D  T R RGFGF+TFE+E+ VE +      HE+  K
Sbjct: 121 NTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKV-CEIHFHEINNK 180

Query: 220 QVEIKKAVPRRVACDFSSNTAQTSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNY 279
            VE KKA P+ V   F   T   + G   Y  +      +G    GY  +     +G  Y
Sbjct: 181 MVECKKAQPKEVM--FPPGTRGRARGLP-YTMDAF---MLGMGMLGYPNFV--ATYGRGY 240

Query: 280 ASFYSAYSYGF-GYGGSMY-------MNGRYG--MNGYGIPDAYGCTAVGYGSN-GYGKG 339
             F  +Y Y F G+  + Y       +    G  +N Y     +G  A   GSN     G
Sbjct: 241 PGFAPSYGYQFPGFPAAAYGPVAAAAVAAARGSVLNSYSAQPNFGAPASPAGSNPARPGG 300

Query: 340 YPG--NGGSMPERYHP 342
           +PG  + G + + Y P
Sbjct: 301 FPGANSPGPVADLYGP 306

[Close]

BLAST of Lcy05g001120 vs. ExPASy TrEMBL
Match: A0A6J1D7K7 (protein gar2-like OS=Momordica charantia OX=3673 GN=LOC111018368 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 1.0e-156
Identity = 280/345 (81.16%), Postives = 307/345 (88.99%), Query Frame = 0


Query: 2   AEERNSNADFDAYNGDGFLQMYDQQQQFDLGSELER-GNVDSTGSEMKHSTSHFDSSSSG 61
           A E +SNADF+AYNGDGFL+ Y+Q Q FDLG E ER  NVDSTG E+KH TSH+DSSSSG
Sbjct: 369 ATETHSNADFNAYNGDGFLEQYEQPQPFDLGREFERHSNVDSTGCEIKHVTSHYDSSSSG 428

Query: 62  KLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVVLKK 121
           KLFVGGVSWETTEETF +YF KYG+IADSVIMMDKHTGRPRGFGFVTFSDPA+AD+VL+K
Sbjct: 429 KLFVGGVSWETTEETFSEYFGKYGDIADSVIMMDKHTGRPRGFGFVTFSDPAIADMVLRK 488

Query: 122 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQI 181
           +HVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPP LTED FKDYFSSFG IIEHQI
Sbjct: 489 EHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPCLTEDGFKDYFSSFGCIIEHQI 548

Query: 182 MIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQ 241
           MIDY+T+RSRGFGFITFE+E+AVENIFAG + HELGGKQVEIKKAVP+R   DFSSNTA+
Sbjct: 549 MIDYQTRRSRGFGFITFENEDAVENIFAGGRIHELGGKQVEIKKAVPKRGTNDFSSNTAK 608

Query: 242 TSSGYDMYRCEGLYDGKMGRAFGGYDIY-APYGGFGGNYASFYSAYSYGFGYGGSMYMNG 301
            S+G+D YR  G+YDGKM RA GGYD+Y  PYGGFGGNYASFY    YGFGYGG+MY N 
Sbjct: 609 NSAGFDRYRSGGVYDGKMDRALGGYDVYTTPYGGFGGNYASFYG--GYGFGYGGAMYTNA 668

Query: 302 RYGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           RYGMNGYGIP+ YGCT VGYG+NG+GKGY GNGGSMPERYHPYWY
Sbjct: 669 RYGMNGYGIPNGYGCT-VGYGANGFGKGYQGNGGSMPERYHPYWY 710

[Close]

BLAST of Lcy05g001120 vs. ExPASy TrEMBL
Match: A0A0A0K9M1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450760 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 4.2e-155
Identity = 275/344 (79.94%), Postives = 308/344 (89.53%), Query Frame = 0


Query: 1   MAEERNSNADFDAYNGDGFLQMYDQQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSSG 60
           MA ER+ N DF+A NG+   QMYDQQ+QFD+G+ELE+ NVDST SE+K+ST+ +DSSSSG
Sbjct: 1   MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 60

Query: 61  KLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVVLKK 120
           KLFVGGV+WETTE+TFRDYFSKYGEIADSVIM+DKHTGRPRGFGFVTF DPA+AD+VLK 
Sbjct: 61  KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 120

Query: 121 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQI 180
           DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPP LTE+EFKDYFSSFG IIEHQI
Sbjct: 121 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 180

Query: 181 MIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQ 240
           MIDY+TKRSRGFGFITFE+E++VENIF+GD+ HELGGKQVEIKKAVP+RVA DF+SN+ Q
Sbjct: 181 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 240

Query: 241 TSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYASFYSAYSYGFGYGGSMYMNGR 300
           T SGYDMYRC GLYD  +G  FG YD+YAPYGGFG NYASFY AY+YGFGYG SMYMNGR
Sbjct: 241 T-SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGR 300

Query: 301 YGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           YGMNGYG P      +VGYG NGYGKGY GNGGSMPER+HPYWY
Sbjct: 301 YGMNGYGTP------SVGYGINGYGKGYEGNGGSMPERFHPYWY 337

[Close]

BLAST of Lcy05g001120 vs. ExPASy TrEMBL
Match: A0A5A7UU27 (Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G001500 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 4.4e-152
Identity = 271/347 (78.10%), Postives = 305/347 (87.90%), Query Frame = 0


Query: 1   MAEERNSNADFD---AYNGDGFLQMYDQQQQFDLGSELERGNVDSTGSEMKHSTSHFDSS 60
           MAEER+ N DF+     NG  FLQ  +QQ+QFD+ +ELE+ NVDST SE+K+ST+ +DSS
Sbjct: 379 MAEERHYNPDFNICHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 438

Query: 61  SSGKLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVV 120
           SSGKLFVGGV+WETTE+TF DYFSKYGEIADSVIM+DKHTGRPRGFGFVTF DPA+AD+V
Sbjct: 439 SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 498

Query: 121 LKKDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIE 180
           LK DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPP LTE EFKDYFSSFG IIE
Sbjct: 499 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 558

Query: 181 HQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSN 240
           HQIMIDY+TKRSRGFGFITFE+E++V+NIF+GD+ HELGGKQVEIKKAVP++VA DF+SN
Sbjct: 559 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 618

Query: 241 TAQTSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYASFYSAYSYGFGYGGSMYM 300
           +  TSSGYDMYRC GLYD  +G  FG YD+YAPYGGFGGNYASFY AY+YGFGYG SMYM
Sbjct: 619 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGYGASMYM 678

Query: 301 NGRYGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           NGRYGMNGYG P      +VGYG NGYGKGY GNGGSMPER+HPYWY
Sbjct: 679 NGRYGMNGYGAP------SVGYGINGYGKGYEGNGGSMPERFHPYWY 719

[Close]

BLAST of Lcy05g001120 vs. ExPASy TrEMBL
Match: A0A5D3BYF2 (Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00980 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 4.4e-152
Identity = 271/347 (78.10%), Postives = 305/347 (87.90%), Query Frame = 0


Query: 1   MAEERNSNADFD---AYNGDGFLQMYDQQQQFDLGSELERGNVDSTGSEMKHSTSHFDSS 60
           MAEER+ N DF+     NG  FLQ  +QQ+QFD+ +ELE+ NVDST SE+K+ST+ +DSS
Sbjct: 1   MAEERHYNPDFNICHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 60

Query: 61  SSGKLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVV 120
           SSGKLFVGGV+WETTE+TF DYFSKYGEIADSVIM+DKHTGRPRGFGFVTF DPA+AD+V
Sbjct: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120

Query: 121 LKKDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIE 180
           LK DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPP LTE EFKDYFSSFG IIE
Sbjct: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 180

Query: 181 HQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSN 240
           HQIMIDY+TKRSRGFGFITFE+E++V+NIF+GD+ HELGGKQVEIKKAVP++VA DF+SN
Sbjct: 181 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 240

Query: 241 TAQTSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYASFYSAYSYGFGYGGSMYM 300
           +  TSSGYDMYRC GLYD  +G  FG YD+YAPYGGFGGNYASFY AY+YGFGYG SMYM
Sbjct: 241 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGYGASMYM 300

Query: 301 NGRYGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           NGRYGMNGYG P      +VGYG NGYGKGY GNGGSMPER+HPYWY
Sbjct: 301 NGRYGMNGYGAP------SVGYGINGYGKGYEGNGGSMPERFHPYWY 341

[Close]

BLAST of Lcy05g001120 vs. ExPASy TrEMBL
Match: E5GCB7 (Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.3e-151
Identity = 270/347 (77.81%), Postives = 305/347 (87.90%), Query Frame = 0


Query: 1   MAEERNSNADFD---AYNGDGFLQMYDQQQQFDLGSELERGNVDSTGSEMKHSTSHFDSS 60
           MAEER+ N DF+     NG  FLQ  +QQ+QFD+ +ELE+ NVDST SE+K+ST+ +DSS
Sbjct: 359 MAEERHYNPDFNLCHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 418

Query: 61  SSGKLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVV 120
           SSGKLFVGGV+WETTE+TF DYFSKYGEIADSVIM+DKHTGRPRGFGFVTF DPA+AD+V
Sbjct: 419 SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 478

Query: 121 LKKDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIE 180
           LK DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPP LTE EFKDYFSSFG IIE
Sbjct: 479 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 538

Query: 181 HQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSN 240
           HQIMIDY+TKRSRGFGFITFE+E++V+NIF+GD+ HELGGKQVEIKKAVP++VA DF+SN
Sbjct: 539 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 598

Query: 241 TAQTSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYASFYSAYSYGFGYGGSMYM 300
           +  TSSGYDMYRC GLYD  +G  FG YD+YAPYGGFGGNYASFY AY+YGFG+G SMYM
Sbjct: 599 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGFGASMYM 658

Query: 301 NGRYGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           NGRYGMNGYG P      +VGYG NGYGKGY GNGGSMPER+HPYWY
Sbjct: 659 NGRYGMNGYGAP------SVGYGINGYGKGYEGNGGSMPERFHPYWY 699

[Close]

BLAST of Lcy05g001120 vs. NCBI nr
Match: XP_038898204.1 (protein gar2-like [Benincasa hispida])

HSP 1 Score: 575.9 bits (1483), Expect = 2.4e-160
Identity = 283/342 (82.75%), Postives = 308/342 (90.06%), Query Frame = 0


Query: 1   MAEERNSNADFDAYNGDGFLQMYDQQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSSG 60
           MAEER+ N DF+AYNG+ FLQMYDQQ QFD+GSELE+GNVDST + +KHST+H+DSSSSG
Sbjct: 366 MAEERHYNPDFNAYNGENFLQMYDQQHQFDMGSELEQGNVDSTSNGIKHSTNHYDSSSSG 425

Query: 61  KLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVVLKK 120
           KLFVGGV+WETTEETF  YFSKYG+IADSVIM+DKHTGRPRGFGFVTF DPAVAD+VLK 
Sbjct: 426 KLFVGGVAWETTEETFNGYFSKYGKIADSVIMLDKHTGRPRGFGFVTFCDPAVADMVLKI 485

Query: 121 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQI 180
           DHVIDGRAVEVKRTVPR DMNDK VSRTKKIFVGGIPP LTE+EFKDYFSSFG IIEHQI
Sbjct: 486 DHVIDGRAVEVKRTVPRTDMNDKSVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 545

Query: 181 MIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQ 240
           MIDY+TKRSRGFGFITFE+E++VENIFAGDK HELGGKQVEIKKAVP+RVA D +SN A 
Sbjct: 546 MIDYKTKRSRGFGFITFENEDSVENIFAGDKIHELGGKQVEIKKAVPKRVAYDVNSNNAH 605

Query: 241 TSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYASFYSAYSYGFGYGGSMYMNGR 300
            SSGYDMYRC GLYDGKMG  F  YD+YAPYGG+GGNYA+FYSAYSYGFGYGGSMYMNGR
Sbjct: 606 MSSGYDMYRCGGLYDGKMGTDFSRYDVYAPYGGYGGNYANFYSAYSYGFGYGGSMYMNGR 665

Query: 301 YGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPY 343
           +GMNGYG+P      A GYG NGYGKGY GNGGSMPERYHPY
Sbjct: 666 FGMNGYGVP------AAGYGYNGYGKGYEGNGGSMPERYHPY 701

[Close]

BLAST of Lcy05g001120 vs. NCBI nr
Match: XP_022150110.1 (protein gar2-like [Momordica charantia])

HSP 1 Score: 562.8 bits (1449), Expect = 2.1e-156
Identity = 280/345 (81.16%), Postives = 307/345 (88.99%), Query Frame = 0


Query: 2   AEERNSNADFDAYNGDGFLQMYDQQQQFDLGSELER-GNVDSTGSEMKHSTSHFDSSSSG 61
           A E +SNADF+AYNGDGFL+ Y+Q Q FDLG E ER  NVDSTG E+KH TSH+DSSSSG
Sbjct: 369 ATETHSNADFNAYNGDGFLEQYEQPQPFDLGREFERHSNVDSTGCEIKHVTSHYDSSSSG 428

Query: 62  KLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVVLKK 121
           KLFVGGVSWETTEETF +YF KYG+IADSVIMMDKHTGRPRGFGFVTFSDPA+AD+VL+K
Sbjct: 429 KLFVGGVSWETTEETFSEYFGKYGDIADSVIMMDKHTGRPRGFGFVTFSDPAIADMVLRK 488

Query: 122 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQI 181
           +HVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPP LTED FKDYFSSFG IIEHQI
Sbjct: 489 EHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPCLTEDGFKDYFSSFGCIIEHQI 548

Query: 182 MIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQ 241
           MIDY+T+RSRGFGFITFE+E+AVENIFAG + HELGGKQVEIKKAVP+R   DFSSNTA+
Sbjct: 549 MIDYQTRRSRGFGFITFENEDAVENIFAGGRIHELGGKQVEIKKAVPKRGTNDFSSNTAK 608

Query: 242 TSSGYDMYRCEGLYDGKMGRAFGGYDIY-APYGGFGGNYASFYSAYSYGFGYGGSMYMNG 301
            S+G+D YR  G+YDGKM RA GGYD+Y  PYGGFGGNYASFY    YGFGYGG+MY N 
Sbjct: 609 NSAGFDRYRSGGVYDGKMDRALGGYDVYTTPYGGFGGNYASFYG--GYGFGYGGAMYTNA 668

Query: 302 RYGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           RYGMNGYGIP+ YGCT VGYG+NG+GKGY GNGGSMPERYHPYWY
Sbjct: 669 RYGMNGYGIPNGYGCT-VGYGANGFGKGYQGNGGSMPERYHPYWY 710

[Close]

BLAST of Lcy05g001120 vs. NCBI nr
Match: XP_011659642.1 (protein gar2 [Cucumis sativus])

HSP 1 Score: 557.4 bits (1435), Expect = 8.8e-155
Identity = 275/344 (79.94%), Postives = 308/344 (89.53%), Query Frame = 0


Query: 1   MAEERNSNADFDAYNGDGFLQMYDQQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSSG 60
           MA ER+ N DF+A NG+   QMYDQQ+QFD+G+ELE+ NVDST SE+K+ST+ +DSSSSG
Sbjct: 372 MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 431

Query: 61  KLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVVLKK 120
           KLFVGGV+WETTE+TFRDYFSKYGEIADSVIM+DKHTGRPRGFGFVTF DPA+AD+VLK 
Sbjct: 432 KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 491

Query: 121 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQI 180
           DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPP LTE+EFKDYFSSFG IIEHQI
Sbjct: 492 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 551

Query: 181 MIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQ 240
           MIDY+TKRSRGFGFITFE+E++VENIF+GD+ HELGGKQVEIKKAVP+RVA DF+SN+ Q
Sbjct: 552 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 611

Query: 241 TSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYASFYSAYSYGFGYGGSMYMNGR 300
           T SGYDMYRC GLYD  +G  FG YD+YAPYGGFG NYASFY AY+YGFGYG SMYMNGR
Sbjct: 612 T-SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGR 671

Query: 301 YGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           YGMNGYG P      +VGYG NGYGKGY GNGGSMPER+HPYWY
Sbjct: 672 YGMNGYGTP------SVGYGINGYGKGYEGNGGSMPERFHPYWY 708

[Close]

BLAST of Lcy05g001120 vs. NCBI nr
Match: KGN45519.1 (hypothetical protein Csa_016070 [Cucumis sativus])

HSP 1 Score: 557.4 bits (1435), Expect = 8.8e-155
Identity = 275/344 (79.94%), Postives = 308/344 (89.53%), Query Frame = 0


Query: 1   MAEERNSNADFDAYNGDGFLQMYDQQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSSG 60
           MA ER+ N DF+A NG+   QMYDQQ+QFD+G+ELE+ NVDST SE+K+ST+ +DSSSSG
Sbjct: 1   MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 60

Query: 61  KLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVVLKK 120
           KLFVGGV+WETTE+TFRDYFSKYGEIADSVIM+DKHTGRPRGFGFVTF DPA+AD+VLK 
Sbjct: 61  KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 120

Query: 121 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQI 180
           DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPP LTE+EFKDYFSSFG IIEHQI
Sbjct: 121 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 180

Query: 181 MIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQ 240
           MIDY+TKRSRGFGFITFE+E++VENIF+GD+ HELGGKQVEIKKAVP+RVA DF+SN+ Q
Sbjct: 181 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 240

Query: 241 TSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYASFYSAYSYGFGYGGSMYMNGR 300
           T SGYDMYRC GLYD  +G  FG YD+YAPYGGFG NYASFY AY+YGFGYG SMYMNGR
Sbjct: 241 T-SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGR 300

Query: 301 YGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           YGMNGYG P      +VGYG NGYGKGY GNGGSMPER+HPYWY
Sbjct: 301 YGMNGYGTP------SVGYGINGYGKGYEGNGGSMPERFHPYWY 337

[Close]

BLAST of Lcy05g001120 vs. NCBI nr
Match: TYK03902.1 (heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo var. makuwa])

HSP 1 Score: 547.4 bits (1409), Expect = 9.1e-152
Identity = 271/347 (78.10%), Postives = 305/347 (87.90%), Query Frame = 0


Query: 1   MAEERNSNADFD---AYNGDGFLQMYDQQQQFDLGSELERGNVDSTGSEMKHSTSHFDSS 60
           MAEER+ N DF+     NG  FLQ  +QQ+QFD+ +ELE+ NVDST SE+K+ST+ +DSS
Sbjct: 1   MAEERHYNPDFNICHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 60

Query: 61  SSGKLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVV 120
           SSGKLFVGGV+WETTE+TF DYFSKYGEIADSVIM+DKHTGRPRGFGFVTF DPA+AD+V
Sbjct: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120

Query: 121 LKKDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIE 180
           LK DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPP LTE EFKDYFSSFG IIE
Sbjct: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 180

Query: 181 HQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSN 240
           HQIMIDY+TKRSRGFGFITFE+E++V+NIF+GD+ HELGGKQVEIKKAVP++VA DF+SN
Sbjct: 181 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 240

Query: 241 TAQTSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYASFYSAYSYGFGYGGSMYM 300
           +  TSSGYDMYRC GLYD  +G  FG YD+YAPYGGFGGNYASFY AY+YGFGYG SMYM
Sbjct: 241 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGYGASMYM 300

Query: 301 NGRYGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           NGRYGMNGYG P      +VGYG NGYGKGY GNGGSMPER+HPYWY
Sbjct: 301 NGRYGMNGYGAP------SVGYGINGYGKGYEGNGGSMPERFHPYWY 341

[Close]

BLAST of Lcy05g001120 vs. TAIR 10
Match: AT1G17640.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 297.0 bits (759), Expect = 2.0e-80
Identity = 179/349 (51.29%), Postives = 221/349 (63.32%), Query Frame = 0


Query: 26  QQQFDLGSELERGN----VDSTGSEMKHSTSHFDSSSS----GKLFVGGVSWETTEETFR 85
           Q  F++ +  +R N    VD+ G +MKHS  H  SSSS    GKLFVGGVSWETT ETF 
Sbjct: 24  QSDFEVETFDDRRNGGAAVDTGGIQMKHSVDHRHSSSSMSSPGKLFVGGVSWETTAETFA 83

Query: 86  DYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADVVLKKDHVIDGRAVEVKRTVPR 145
           +YF K+GE+ DSVIM D+ TG PRGFGFVTF+D AVA+ VL++DHVID R V++KRT+PR
Sbjct: 84  NYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEEDHVIDDRKVDLKRTLPR 143

Query: 146 ADMND--KLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFI 205
            D +   K VS+T+KIFVGG+PP L EDE K+YF  +G IIEHQIM D+ T RSRGFGF+
Sbjct: 144 GDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFV 203

Query: 206 TFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQTSSGYDMYRCEGLYD 265
           TF++E++V+ +F+  K HELG KQVEIK+A P+R   D S  +   S  YD    E  Y 
Sbjct: 204 TFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGRDNSFRSYGASGKYDQ---EDSYS 263

Query: 266 GKMGRAFGGYDIYAPYGGFGG-------NYASFY---SAYSYGFGYGGSMYMNGRYGMNG 325
           GK    +  Y  Y  YGG+G        N A FY     Y YG+GYGG M+  G YG  G
Sbjct: 264 GKANEDYSMYSGYGGYGGYGAYAGNSMVNPAGFYGYGGGYGYGYGYGGQMFNMG-YGAGG 323

Query: 326 YG-IPDAYGCTAV---------GYGSNGYGKGYPGNG--GSMPERYHPY 343
           Y  +   YG  A          G G+NG   G  GNG  GS P+RYHPY
Sbjct: 324 YSHMGSGYGVAAAAAYGGGKSHGNGNNGSSSG-KGNGTNGSGPDRYHPY 367

[Close]

BLAST of Lcy05g001120 vs. TAIR 10
Match: AT5G40490.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 215.7 bits (548), Expect = 5.8e-56
Identity = 138/310 (44.52%), Postives = 179/310 (57.74%), Query Frame = 0


Query: 41  DSTGSEMKHSTSHFDSSSSGKLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRP 100
           D       HS    D  S+GK+FVGG++ ETT   F  +F KYGEI DSVIM D+ TG+P
Sbjct: 25  DDDDKSQPHSGGGVD--SAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQP 84

Query: 101 RGFGFVTFSDPAVADVVLKKDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPAL 160
           RGFGFVT++D +V D V++ +H+I G+ VE+KRT+PR  M+     +TKKIFVGGIP ++
Sbjct: 85  RGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTIPRGSMSSN-DFKTKKIFVGGIPSSV 144

Query: 161 TEDEFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQV 220
            +DEFK++F  FG + EHQIM D+ T RSRGFGF+T+ESE+ V+++ A   R EL G QV
Sbjct: 145 DDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQV 204

Query: 221 EIKKAVPRR------VACDFSSNTAQTSSGYDMYRCEGLYDGKMGRAFGG-YDIYAPYGG 280
           EIKKA P++       +  F  + +    GY     +G Y G  G  +GG    Y   GG
Sbjct: 205 EIKKAEPKKPNSVTTPSKRFGDSRSNFGGGYG----DG-YGGGHGGGYGGPGGPYKSGGG 264

Query: 281 FGGNYASFYSAYSYGF-GYGGSMYMNG---RYGMNGYGIPDAYGCTAVGYGSNGY----G 336
           +GG  +  Y  Y   F GYGG  Y  G     G    G    YG    GY   GY    G
Sbjct: 265 YGGGRSGGYGGYGGEFGGYGGGGYGGGVGPYRGEPALGYSGRYGGGGGGYNRGGYSMGGG 324

[Close]

BLAST of Lcy05g001120 vs. TAIR 10
Match: AT3G13224.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-55
Identity = 124/299 (41.47%), Postives = 170/299 (56.86%), Query Frame = 0


Query: 55  DSSSSGKLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVA 114
           D +S GK+F+GG+  +TT   F  +F KYGEI DSVIM D+HTG+PRGFGF+TF+DP+V 
Sbjct: 14  DGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVV 73

Query: 115 DVVLKKDHVIDGRAVEVKRTVPR-ADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFG 174
           D V++  HVI+G+ VE+KRT+P+ A  N     +TKKIFVGGIP  +TEDE KD+F+ +G
Sbjct: 74  DKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAKYG 133

Query: 175 SIIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACD 234
           +++EHQ++ D+ T RSRGFGF+ F+SEE V+ + +     ++   QVEIKKA P++    
Sbjct: 134 NVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKAEPKKSLNR 193

Query: 235 FSSNTAQTSSGYDMYRCEGLYDGKMGRAFGGY-DIYAPYGGFGGNYASFYSAYSYGFG-- 294
              +      G         Y G  G   GGY     P    GG  + +   Y YG G  
Sbjct: 194 SPPSYGSHPRGRSSNDSYASYGGPYGGFDGGYGHPPGPIRSHGGPASRYAGGYGYGRGSV 253

Query: 295 ---YGGSMYMNGRYGMNGY------GIPDAYGCTAVGYGSNGYGK-------GYPGNGG 334
              +GG     G   + GY      G    +G    G+G  GYG+       GYP  GG
Sbjct: 254 GPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGGEGYGRGGEGAYLGYPRGGG 312

[Close]

BLAST of Lcy05g001120 vs. TAIR 10
Match: AT2G33410.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 196.1 bits (497), Expect = 4.8e-50
Identity = 131/327 (40.06%), Postives = 169/327 (51.68%), Query Frame = 0


Query: 57  SSSGKLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADV 116
           S  GKLF+GG+SW+T E   R+YFS +GE+    +M +K TGRPRGFGFV FSDPAV D 
Sbjct: 3   SDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDR 62

Query: 117 VLKKDHVIDGRAVEVKRTVPRADMNDKLVS---------------RTKKIFVGGIPPALT 176
           VL+  H ID R V+VKR + R + +    S               RTKKIFVGG+PPALT
Sbjct: 63  VLQDKHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPALT 122

Query: 177 EDEFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVE 236
            DEF+ YF ++G + +  IMID  T+R RGFGF++F+SE++V+ +      H+L GKQVE
Sbjct: 123 SDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVD-LVLHKTFHDLNGKQVE 182

Query: 237 IKKAVPRRVACDFSSNTAQTSSGYDMYRCEGLYDGKMGRAFGGYD--------------- 296
           +K+A+P+      +S   + S G       G + G  G    GY+               
Sbjct: 183 VKRALPKDANPGIASGGGRGSGG------AGGFPGYGGSGGSGYEGRVDSNRYMQPQNTG 242

Query: 297 -IYAPYGGFGGNYASFYSAYSYGFGYGGSMYMNGRYGMNG---YGIPDAYGC-------- 337
             Y PYGG G  Y + Y   S G GYGG     G YG      YG P   G         
Sbjct: 243 SGYPPYGGSG--YGTGYGYGSNGVGYGGF----GGYGNPAGAPYGNPSVPGAGFGSGPRS 302

[Close]

BLAST of Lcy05g001120 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 194.9 bits (494), Expect = 1.1e-49
Identity = 122/304 (40.13%), Postives = 171/304 (56.25%), Query Frame = 0


Query: 57  SSSGKLFVGGVSWETTEETFRDYFSKYGEIADSVIMMDKHTGRPRGFGFVTFSDPAVADV 116
           S +GKLF+GG+SW+T EE  ++YFS +GE+ ++VI+ D+ TGR RGFGFV F+DPAVA++
Sbjct: 3   SDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEI 62

Query: 117 VLKKDHVIDGRAVEVKRTVPRADMNDKLVS-------------RTKKIFVGGIPPALTED 176
           V+ + H IDGR VE K+ VPR D N    S             RT+KIFVGG+P ++TE 
Sbjct: 63  VITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTES 122

Query: 177 EFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIK 236
           +FK YF  FG+  +  +M D+ T+R RGFGFIT++SEEAVE +      HEL GK VE+K
Sbjct: 123 DFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLL-KTFHELNGKMVEVK 182

Query: 237 KAVPRRVACDFSSNTAQTSSGYDMYRCEGLYDGKM----GRAFGGYDI-----YAPYGGF 296
           +AVP+ ++   S +       Y + R   L +G        A GGY +     ++P G  
Sbjct: 183 RAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGAG 242

Query: 297 GGNYASFYSAYSYGFGYGGSMYMNGRYGMNGYGIPDAYGCTAVGY---GSNGYGK--GYP 334
              +A++ S Y     +   +      G N  G  D YG     Y    +N +G   GY 
Sbjct: 243 RSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVD-YGRGMSPYYIGNTNRFGPAVGYE 302

The following BLAST results are available for this feature:

BLAST of Lcy05g001120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	1.5e-48	41.95	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
Q99383	8.0e-42	39.27	Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain...	[more]
O94432	2.3e-41	40.29	Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain...	[more]
Q9VVE5	6.7e-41	39.23	RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=R...	[more]
Q920Q6	2.7e-37	35.44	RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1	[more]

BLAST of Lcy05g001120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D7K7	1.0e-156	81.16	protein gar2-like OS=Momordica charantia OX=3673 GN=LOC111018368 PE=4 SV=1	[more]
A0A0A0K9M1	4.2e-155	79.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450760 PE=4 SV=1	[more]
A0A5A7UU27	4.4e-152	78.10	Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5D3BYF2	4.4e-152	78.10	Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=119469...	[more]
E5GCB7	1.3e-151	77.81	Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo subsp. melo OX=412675...	[more]

BLAST of Lcy05g001120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898204.1	2.4e-160	82.75	protein gar2-like [Benincasa hispida]	[more]
XP_022150110.1	2.1e-156	81.16	protein gar2-like [Momordica charantia]	[more]
XP_011659642.1	8.8e-155	79.94	protein gar2 [Cucumis sativus]	[more]
KGN45519.1	8.8e-155	79.94	hypothetical protein Csa_016070 [Cucumis sativus]	[more]
TYK03902.1	9.1e-152	78.10	heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo var. makuwa]	[more]

BLAST of Lcy05g001120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17640.1	2.0e-80	51.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G40490.1	5.8e-56	44.52	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G13224.2	1.3e-55	41.47	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G33410.1	4.8e-50	40.06	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	1.1e-49	40.13	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 61..132 e-value: 3.7E-25 score: 99.6 coord: 150..223 e-value: 1.0E-21 score: 88.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 62..119 e-value: 2.4E-14 score: 52.9 coord: 151..220 e-value: 3.1E-17 score: 62.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 60..136 score: 17.455235
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 149..227 score: 17.915731
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 148..229 e-value: 6.3E-24 score: 86.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 58..141 e-value: 3.0E-27 score: 96.7
IPR037366	BOULE/DAZ family	PANTHER	PTHR11176	BOULE-RELATED	coord: 52..329
None	No IPR available	PANTHER	PTHR11176:SF42	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 52..329
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 62..132 e-value: 1.22887E-38 score: 130.013
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 53..140
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 146..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g001120.1	Lcy05g001120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding