Lcy04g020270 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g020270
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Autophagy-related protein
Location	Chr04: 51804692 .. 51807989 (-)
RNA-Seq Expression	Lcy04g020270
Synteny	Lcy04g020270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATCCGTAGGCTTATACGTGTTTGAACTTGAAAGAGGTTCGTTCATCTACGAAACTCACGAGTCATGATCAATTACTCTCTGTTTTTAAATTCTCCCTTCGTATTATCCAATTCTTCTCACTCGCCTTTTGCCAATTGATCACTCAATTACTGAAATTCGAAACGCCTTTCTGGCTTTTTGTGATCTTCAGTTGGTATGTGCCATTGCAACCACCTTTGCTTTTTTCGCTTTTTCATTTTGATTGATGATTGATTATGCTTTTCCCGAGAGCGAATTCTTTGTGGGATTTTAACGTTTCGCTATCTGAATTTGCAGCGAGCAATCGTAGCGTGAGATTCTAATTTCTTCCCATGGCCAGAAGCTCGTTCAAACTCGGAATTCCTTTGGGTAATCATTTACTTTTCGTCTCTCAAAAGCTTCATTTATCCGCTTTGTTCTTTTAGTATATATTTGGGCGTAATTCGCGTATTGTTATTGAGATTTTACTTCGGGTTCCATTGATGAATTGAACCACTAGGCGAAGTATCGGGGGACATGGAACTGGAATTCAATTGAATTGCTTTGAATTTTTTTTATCTTCGTGTTGCGTTTGCGGTTTGTGAGCACCGAGTAGGCGAAAATCTGTCTGGTTTCATGTTTGTTAATAGTAACACTATTTTATCTCCTTTTCGTTAACTTTATTCAGGAAAATCTAACAGAGTATAGTACAGAATTATGTGATACTTCATGCCTAACTATTATTGCTTACTTTGTTGGGATCTTCACTTCTCAGAAAAGAGACAGGCTGAAGCTGCTCGCATAAGAGAAAAGTACCCGGATAGAATACCTGTAAGAATAATGTTATTTATTAAGTTCTTTTCTTCGTATCTTCTCCTAAATTTACTTTCATTTTGGTACTGATTCAAATAAGTAAACAGGTGATTGTTGAGAAAGCTGGGAGGAGTAACATTGCTGACATTGATAGGAACAAGTACTCCCTCTCTTCTCTTTGTGAATCCTTGAATTAGTATGAATAGATGAGATGTTATCACATTCTTAACTGATAAATTAAAGTAGATACTACCATATATGTTTGTAGCAGCTGCAGTTATATGTTGAATGAAAATAATGGAGTGCTAGCATGTAGTGTGAATGTGGAGTTCATTGGAAACAGAAGCACCTAAATCAATAATAAGAATCATTGTTTATTTGAAAGGTTTCTCTGCCTATCAGATGGTAACTTCGTTAAATTGAGTGATACATGGAAAAAATGCACTGGATGAGTCCCAATAAAGCCATAGGCCCCATATTTAGATGCCATGTTACTGCAGTAACTCCAGTCCCATTGTTGGTACTTTATAATTCTGGATAAATCTCGAACATGAAGAAGTATTGTTTTGTTTCGAGCAGCTAGATGATCCATTTTGGAAGTGACCAATATGGTATACTTGAACAATCATTTTCATTCAGTGTGCCATTTTTATCTTTCCCATTGCAGATACCTCGTCCCCGCTGATTTAACTGTTGGACAGTTCGTTTACGTTGTTAGGAAACGGATTAAACTTAGTGCCGAGAAAGCTATATTTGTATTTGTCAAGGACACTCTACCTTCGACTGGTGAGAGACGATCCTTTTTCTCGTAGTCTATGATCTCTCATATTGAATGTAAGCATTGTAATAAATTCTTCCGTGCAACAGGTGCATTAATGTCTGCAATTTATGAGGAGAACAAGGATGAAGATGGTTTTCTTTACATGTCTTACAGTGGTGAAAACACTTTTGGTGGGGTCCTTGGAGGACAATGACACATTTACCTGTAAATTCCTGCTATGCCCTTCCAGATCAATCAATGCACCAGCTTTCTGTTCCGTTTTATTTTAGTATATAACTTTCCATACTGGTATTAAAAGGGTGCTGCTCAAGGAGTGCCCCAAATGTTTTAGCTTATTTCCTGATTTCAATTGAGTTGTGAACCATTGACATAGCTATCGGTATCTTTCTAGTTGCATATTGAGCAGTGAAATGATTAAACTTTCTGATCAATTTAATCAGTCTAATGGCATTATGATACATGAATGATGAAACCTGAACTCCATGGCACACTATATCTTTGCCGAATCAAGTCTAGAACTCTAGGACACCAAGTTTGCTAAACACTCAAAAACAAAATACCAGAATGATGAAAAGTTTCAACCTTTTGCTAACAAGAGTAGATTTCTCTCTCGCTCTGTTATTTTGGTGCTAAGGATATTGAGACAAATCTGCCTAATTTACTTGGAGCTTTTCTTTCGTGGGTTCATAAGCCACTTGATGCCATTAGATATCCCACTTCCAATCTTTCTGGCACCAGCCACGGTCGCCGCCTTGGCTTTTGCAAATCCAGGCTTAGAACCAGCCTTCTTGTCGGAGCTGCGGTCTCCTTTGGCTCTACTGCCGTCGTCTTCTTCCATAGCGCCAATTCCTCCGGCTCCCCATTGGTCGGCCCAGCTCGGTGCTTCTGCAGCCATGGTATCTAATTCCCAACCAATACAGTAAACTCACTAACTATCCATTATTGTTGTAAAAAGTAACAGCAGTCAAATTTATATGGCTAAAAATAACATACTCTTGTTCGGATATCCATTAAATTTACCCAGATTAGTCAAGCTAACTGAAAGTCTTACCTTTTCTTCAACATAGAGCTAGATTCTTTCTGTCATATTGTTCAAACCATTTCTAGAACGCTATAAACGAAACAAGAAAAAGAGAGATTGAAAGTGACAAAGATCTGATCTAAAGATTTCATACATAAGACAGAACATATCTTGAACTTGAAGAAGCACAGACAAAACTAGGCTATATTTAGAAACAGAAAAGATCTGAATCAGAATAATTATTAGTAGCAGCTTATATAGGTGCAGGAAGCGAAGATATAGTCATAGTCATACCTGGGGATCGAAAACGATGAAGAACAACAGAAGCTTGGTGAAGGAATTCGAGGAAGATTAGATAATAATTGCCAGAAACGCCTTTAGAAAGCAGAAGCAGCACACAGGGCCATAGGTGGATGGGCTGTCTTTTACTCGCACTGCAATAATACTTTTTTAAAGGACTTGCCAACTCCATCTGGTTTCCATCTAACGAAGCAAACTATGTCTTTTGGGCATCTTTTTCTTTTTAAAAAATTACATCTTTAATCCTCCTCGTAATCACAAGGCATCTCATTTTCACAAGGCCCGTAATCTTGGACCAAATGTCTACTGACAAAACCTGGGTTCAAATTCAAACTTGTAATCGAATCCAACTGTTTGTTTACTCTGCTTAGTTAATGAACGAA

mRNA sequence

ATAATCCGTAGGCTTATACGTGTTTGAACTTGAAAGAGGTTCGTTCATCTACGAAACTCACGAGTCATGATCAATTACTCTCTGTTTTTAAATTCTCCCTTCGTATTATCCAATTCTTCTCACTCGCCTTTTGCCAATTGATCACTCAATTACTGAAATTCGAAACGCCTTTCTGGCTTTTTGTGATCTTCAGTTGCGAGCAATCGTAGCGTGAGATTCTAATTTCTTCCCATGGCCAGAAGCTCGTTCAAACTCGGAATTCCTTTGGGTAATCATTTACTTTTCGTCTCTCAAAAGCTTCATTTATCCGCTTTGTTCTTTTAGTATATATTTGGGCGTAATTCGCGTATTGTTATTGAGATTTTACTTCGGGTTCCATTGATGAATTGAACCACTAGGCGAAGTATCGGGGGACATGGAACTGGAATTCAATTGAATTGCTTTGAATTTTTTTTATCTTCGTGTTGCGTTTGCGGTTTGTGAGCACCGAGTAGGCGAAAATCTGTCTGGTTTCATGTTTGTTAATAGTAACACTATTTTATCTCCTTTTCGTTAACTTTATTCAGGAAAATCTAACAGAGTATAGTACAGAATTATGTGATACTTCATGCCTAACTATTATTGCTTACTTTGTTGGGATCTTCACTTCTCAGAAAAGAGACAGGCTGAAGCTGCTCGCATAAGAGAAAAGTACCCGGATAGAATACCTGTGATTGTTGAGAAAGCTGGGAGGAGTAACATTGCTGACATTGATAGGAACAAATACCTCGTCCCCGCTGATTTAACTGTTGGACAGTTCGTTTACGTTGTTAGGAAACGGATTAAACTTAGTGCCGAGAAAGCTATATTTGTATTTGTCAAGGACACTCTACCTTCGACTGGTGCATTAATGTCTGCAATTTATGAGGAGAACAAGGATGAAGATGGTTTTCTTTACATGTCTTACAGTGGTGAAAACACTTTTGGTGGGGTCCTTGGAGGACAATGACACATTTACCTGTAAATTCCTGCTATGCCCTTCCAGATCAATCAATGCACCAGCTTTCTGTTCCGTTTTATTTTAGTATATAACTTTCCATACTGGTATTAAAAGGGTGCTGCTCAAGGAGTGCCCCAAATGTTTTAGCTTATTTCCTGATTTCAATTGAGTTGTGAACCATTGACATAGCTATCGGTATCTTTCTAGTTGCATATTGAGCAGTGAAATGATTAAACTTTCTGATCAATTTAATCAGTCTAATGGCATTATGATACATGAATGATGAAACCTGAACTCCATGGCACACTATATCTTTGCCGAATCAAGTCTAGAACTCTAGGACACCAAGTTTGCTAAACACTCAAAAACAAAATACCAGAATGATGAAAAGTTTCAACCTTTTGCTAACAAGAGTAGATTTCTCTCTCGCTCTGTTATTTTGGTGCTAAGGATATTGAGACAAATCTGCCTAATTTACTTGGAGCTTTTCTTTCGTGGGTTCATAAGCCACTTGATGCCATTAGATATCCCACTTCCAATCTTTCTGGCACCAGCCACGGTCGCCGCCTTGGCTTTTGCAAATCCAGGCTTAGAACCAGCCTTCTTGTCGGAGCTGCGGTCTCCTTTGGCTCTACTGCCGTCGTCTTCTTCCATAGCGCCAATTCCTCCGGCTCCCCATTGGTCGGCCCAGCTCGGTGCTTCTGCAGCCATGGTATCTAATTCCCAACCAATACAGTAAACTCACTAACTATCCATTATTGTTGTAAAAAGTAACAGCAGTCAAATTTATATGGCTAAAAATAACATACTCTTGTTCGGATATCCATTAAATTTACCCAGATTAGTCAAGCTAACTGAAAGTCTTACCTTTTCTTCAACATAGAGCTAGATTCTTTCTGTCATATTGTTCAAACCATTTCTAGAACGCTATAAACGAAACAAGAAAAAGAGAGATTGAAAGTGACAAAGATCTGATCTAAAGATTTCATACATAAGACAGAACATATCTTGAACTTGAAGAAGCACAGACAAAACTAGGCTATATTTAGAAACAGAAAAGATCTGAATCAGAATAATTATTAGTAGCAGCTTATATAGGTGCAGGAAGCGAAGATATAGTCATAGTCATACCTGGGGATCGAAAACGATGAAGAACAACAGAAGCTTGGTGAAGGAATTCGAGGAAGATTAGATAATAATTGCCAGAAACGCCTTTAGAAAGCAGAAGCAGCACACAGGGCCATAGGTGGATGGGCTGTCTTTTACTCGCACTGCAATAATACTTTTTTAAAGGACTTGCCAACTCCATCTGGTTTCCATCTAACGAAGCAAACTATGTCTTTTGGGCATCTTTTTCTTTTTAAAAAATTACATCTTTAATCCTCCTCGTAATCACAAGGCATCTCATTTTCACAAGGCCCGTAATCTTGGACCAAATGTCTACTGACAAAACCTGGGTTCAAATTCAAACTTGTAATCGAATCCAACTGTTTGTTTACTCTGCTTAGTTAATGAACGAA

Coding sequence (CDS)

ATGCCTAACTATTATTGCTTACTTTGTTGGGATCTTCACTTCTCAGAAAAGAGACAGGCTGAAGCTGCTCGCATAAGAGAAAAGTACCCGGATAGAATACCTGTGATTGTTGAGAAAGCTGGGAGGAGTAACATTGCTGACATTGATAGGAACAAATACCTCGTCCCCGCTGATTTAACTGTTGGACAGTTCGTTTACGTTGTTAGGAAACGGATTAAACTTAGTGCCGAGAAAGCTATATTTGTATTTGTCAAGGACACTCTACCTTCGACTGGTGCATTAATGTCTGCAATTTATGAGGAGAACAAGGATGAAGATGGTTTTCTTTACATGTCTTACAGTGGTGAAAACACTTTTGGTGGGGTCCTTGGAGGACAATGA

Protein sequence

MPNYYCLLCWDLHFSEKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGVLGGQ

Homology

[Close]

BLAST of Lcy04g020270 vs. ExPASy Swiss-Prot
Match: A2YS06 (Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=3 SV=2)

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-46
Identity = 94/108 (87.04%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 13  HFSEKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRI 72
           H  E+RQAEA RIREKYPDRIPVIVEKA RS+I DID+ KYLVPADLTVGQFVYVVRKRI
Sbjct: 10  HPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRI 69

Query: 73  KLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG 121
           KLSAEKAIF+FVK+TLP T ALMSAIYEENKDEDGFLYM+YSGENTFG
Sbjct: 70  KLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Lcy04g020270 vs. ExPASy Swiss-Prot
Match: Q6Z1D5 (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-46
Identity = 94/108 (87.04%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 13  HFSEKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRI 72
           H  E+RQAEA RIREKYPDRIPVIVEKA RS+I DID+ KYLVPADLTVGQFVYVVRKRI
Sbjct: 10  HPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRI 69

Query: 73  KLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG 121
           KLSAEKAIF+FVK+TLP T ALMSAIYEENKDEDGFLYM+YSGENTFG
Sbjct: 70  KLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Lcy04g020270 vs. ExPASy Swiss-Prot
Match: M1C146 (Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 7.4e-46
Identity = 92/108 (85.19%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 13  HFSEKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRI 72
           H  E+RQAEAARIREKYPDRIPVIVEKA RS+I DID+ KYLVPADLTVGQFVYVVRKRI
Sbjct: 10  HPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRI 69

Query: 73  KLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG 121
           KLSAEKAIF+FVK+ LP T A+MSAIYEE+KDEDGFLYM+YSGENTFG
Sbjct: 70  KLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Lcy04g020270 vs. ExPASy Swiss-Prot
Match: Q9SL04 (Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.7e-45
Identity = 91/108 (84.26%), Postives = 99/108 (91.67%), Query Frame = 0


Query: 13  HFSEKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRI 72
           H  EKRQAEAARIREKYPDRIPVIVE+A +S++ DIDR KYLVPADLTVGQFVYVVRKRI
Sbjct: 10  HPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRI 69

Query: 73  KLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG 121
           KLS EKAIF+FVK+ LP T A+MSAIYEE+KDEDGFLYMSYSGENTFG
Sbjct: 70  KLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Lcy04g020270 vs. ExPASy Swiss-Prot
Match: A2XXR7 (Autophagy-related protein 8B OS=Oryza sativa subsp. indica OX=39946 GN=ATG8B PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.2e-45
Identity = 92/108 (85.19%), Postives = 98/108 (90.74%), Query Frame = 0


Query: 13  HFSEKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRI 72
           H  E+RQAEA RIREKY DRIPVIVEKA RS+I DID+ KYLVPADLTVGQFVYVVRKRI
Sbjct: 10  HTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRI 69

Query: 73  KLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG 121
           KLS EKAIF+FVK+TLP T ALMSAIYEENKDEDGFLYM+YSGENTFG
Sbjct: 70  KLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Lcy04g020270 vs. ExPASy TrEMBL
Match: A0A1S3B043 (Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103484614 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.6e-51
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 16  EKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLS 75
           EKRQAEAARIREKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQFVYVVRKRIKLS
Sbjct: 13  EKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQFVYVVRKRIKLS 72

Query: 76  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGVLGGQ 127
           AEKAIFVFVKDTLPSTGALMSAIY +NKDEDGFLYMSYSGENTFGG LGGQ
Sbjct: 73  AEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFLGGQ 123

[Close]

BLAST of Lcy04g020270 vs. ExPASy TrEMBL
Match: A0A5D3CPT6 (Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006460 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.6e-51
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 16  EKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLS 75
           EKRQAEAARIREKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQFVYVVRKRIKLS
Sbjct: 13  EKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQFVYVVRKRIKLS 72

Query: 76  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGVLGGQ 127
           AEKAIFVFVKDTLPSTGALMSAIY +NKDEDGFLYMSYSGENTFGG LGGQ
Sbjct: 73  AEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFLGGQ 123

[Close]

BLAST of Lcy04g020270 vs. ExPASy TrEMBL
Match: A0A6J1GDU9 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111453258 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.8e-50
Identity = 103/111 (92.79%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 16  EKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLS 75
           E+R+AEAAR+REKYPDRIPVIVEKAGRSNI DIDRNKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 76  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGVLGGQ 127
           AE+AIFVFVKDTLPSTGALMS IYE NKDEDGFLYMSYSGENTFGG LGGQ
Sbjct: 73  AERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFLGGQ 123

[Close]

BLAST of Lcy04g020270 vs. ExPASy TrEMBL
Match: A0A0A0KJW7 (Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_6G513730 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.0e-50
Identity = 105/111 (94.59%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 16  EKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLS 75
           EKR AEAARIREKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQFVYVVRKRIKLS
Sbjct: 13  EKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQFVYVVRKRIKLS 72

Query: 76  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGVLGGQ 127
           AEKAIFVFVKDTLPSTGALMSAIY +NKDEDGFLYMSYSGENTFGG LGGQ
Sbjct: 73  AEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFLGGQ 123

[Close]

BLAST of Lcy04g020270 vs. ExPASy TrEMBL
Match: A0A6J1CL79 (Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111012314 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.2e-50
Identity = 106/111 (95.50%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 16  EKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLS 75
           E+RQAEAARIREKYP+RIPVIVEKAGRSNIADID+NKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRQAEAARIREKYPNRIPVIVEKAGRSNIADIDKNKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 76  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGVLGGQ 127
           AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF G LGGQ
Sbjct: 73  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ 122

[Close]

BLAST of Lcy04g020270 vs. NCBI nr
Match: XP_008439996.1 (PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_008439997.1 PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_016899344.1 PREDICTED: autophagy-related protein 8C [Cucumis melo] >TYK13044.1 autophagy-related protein 8C [Cucumis melo var. makuwa])

HSP 1 Score: 210.7 bits (535), Expect = 7.4e-51
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 16  EKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLS 75
           EKRQAEAARIREKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQFVYVVRKRIKLS
Sbjct: 13  EKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQFVYVVRKRIKLS 72

Query: 76  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGVLGGQ 127
           AEKAIFVFVKDTLPSTGALMSAIY +NKDEDGFLYMSYSGENTFGG LGGQ
Sbjct: 73  AEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFLGGQ 123

[Close]

BLAST of Lcy04g020270 vs. NCBI nr
Match: KAG6603779.1 (Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033949.1 Autophagy-related protein 8C [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50
Identity = 104/111 (93.69%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 16  EKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLS 75
           EKR+AEAAR+REKYPDRIPVIVEKAGRSNI DIDRNKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  EKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 76  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGVLGGQ 127
           AE+AIFVFVKDTLPSTGALMS IYE NKDEDGFLYMSYSGENTFGG LGGQ
Sbjct: 73  AERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFLGGQ 123

[Close]

BLAST of Lcy04g020270 vs. NCBI nr
Match: XP_022950063.1 (autophagy-related protein 8C-like [Cucurbita moschata])

HSP 1 Score: 208.4 bits (529), Expect = 3.7e-50
Identity = 103/111 (92.79%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 16  EKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLS 75
           E+R+AEAAR+REKYPDRIPVIVEKAGRSNI DIDRNKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 76  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGVLGGQ 127
           AE+AIFVFVKDTLPSTGALMS IYE NKDEDGFLYMSYSGENTFGG LGGQ
Sbjct: 73  AERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFLGGQ 123

[Close]

BLAST of Lcy04g020270 vs. NCBI nr
Match: XP_004134765.1 (autophagy-related protein 8C [Cucumis sativus] >XP_011658146.1 autophagy-related protein 8C [Cucumis sativus] >XP_011658147.1 autophagy-related protein 8C [Cucumis sativus] >KGN49109.1 hypothetical protein Csa_003738 [Cucumis sativus])

HSP 1 Score: 207.6 bits (527), Expect = 6.2e-50
Identity = 105/111 (94.59%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 16  EKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLS 75
           EKR AEAARIREKYPDRIPVIVEKAGRS+IADIDRNKYLVP DLTVGQFVYVVRKRIKLS
Sbjct: 13  EKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQFVYVVRKRIKLS 72

Query: 76  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGVLGGQ 127
           AEKAIFVFVKDTLPSTGALMSAIY +NKDEDGFLYMSYSGENTFGG LGGQ
Sbjct: 73  AEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFLGGQ 123

[Close]

BLAST of Lcy04g020270 vs. NCBI nr
Match: XP_022142105.1 (autophagy-related protein 8C-like [Momordica charantia] >XP_022142106.1 autophagy-related protein 8C-like [Momordica charantia])

HSP 1 Score: 206.8 bits (525), Expect = 1.1e-49
Identity = 106/111 (95.50%), Postives = 109/111 (98.20%), Query Frame = 0


Query: 16  EKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLS 75
           E+RQAEAARIREKYP+RIPVIVEKAGRSNIADID+NKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRQAEAARIREKYPNRIPVIVEKAGRSNIADIDKNKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 76  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGVLGGQ 127
           AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF G LGGQ
Sbjct: 73  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ 122

[Close]

BLAST of Lcy04g020270 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-46
Identity = 91/108 (84.26%), Postives = 99/108 (91.67%), Query Frame = 0


Query: 13  HFSEKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRI 72
           H  EKRQAEAARIREKYPDRIPVIVE+A +S++ DIDR KYLVPADLTVGQFVYVVRKRI
Sbjct: 10  HPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRI 69

Query: 73  KLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG 121
           KLS EKAIF+FVK+ LP T A+MSAIYEE+KDEDGFLYMSYSGENTFG
Sbjct: 70  KLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Lcy04g020270 vs. TAIR 10
Match: AT2G05630.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 181.0 bits (458), Expect = 5.8e-46
Identity = 89/105 (84.76%), Postives = 98/105 (93.33%), Query Frame = 0


Query: 16  EKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLS 75
           +KRQAEAARIREKYPDRIPVIVE+A +S++ DIDR KYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 57  KKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLS 116

Query: 76  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG 121
            EKAIF+FVK+ LP T A+MSAIYEE+KDEDGFLYMSYSGENTFG
Sbjct: 117 PEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 161

[Close]

BLAST of Lcy04g020270 vs. TAIR 10
Match: AT4G21980.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 180.6 bits (457), Expect = 7.6e-46
Identity = 88/107 (82.24%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 16  EKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLS 75
           E R +E++RIREKYPDRIPVIVEKAG+S++ DID+ KYLVPADLTVGQFVYVVRKRIKL 
Sbjct: 13  EARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLG 72

Query: 76  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGV 123
           AEKAIFVFVK+TLP T ALMSAIYEE+KDEDGFLYM+YSGENTFG +
Sbjct: 73  AEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGSL 119

[Close]

BLAST of Lcy04g020270 vs. TAIR 10
Match: AT4G21980.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 180.6 bits (457), Expect = 7.6e-46
Identity = 88/107 (82.24%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 16  EKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRIKLS 75
           E R +E++RIREKYPDRIPVIVEKAG+S++ DID+ KYLVPADLTVGQFVYVVRKRIKL 
Sbjct: 28  EARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLG 87

Query: 76  AEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGGV 123
           AEKAIFVFVK+TLP T ALMSAIYEE+KDEDGFLYM+YSGENTFG +
Sbjct: 88  AEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGSL 134

[Close]

BLAST of Lcy04g020270 vs. TAIR 10
Match: AT1G62040.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 180.3 bits (456), Expect = 9.9e-46
Identity = 88/108 (81.48%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 13  HFSEKRQAEAARIREKYPDRIPVIVEKAGRSNIADIDRNKYLVPADLTVGQFVYVVRKRI 72
           H  E+RQ E++RIREKYPDRIPVIVE+A RS++ +ID+ KYLVPADLTVGQFVYVVRKRI
Sbjct: 10  HPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRI 69

Query: 73  KLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG 121
           KLSAEKAIFVFVK+TLP T A+MSAIY+ENKDEDGFLYM+YSGENTFG
Sbjct: 70  KLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

The following BLAST results are available for this feature:

BLAST of Lcy04g020270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2YS06	1.1e-46	87.04	Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=...	[more]
Q6Z1D5	1.1e-46	87.04	Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C P...	[more]
M1C146	7.4e-46	85.19	Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV...	[more]
Q9SL04	1.7e-45	84.26	Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1	[more]
A2XXR7	2.2e-45	85.19	Autophagy-related protein 8B OS=Oryza sativa subsp. indica OX=39946 GN=ATG8B PE=...	[more]

BLAST of Lcy04g020270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B043	3.6e-51	95.50	Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103484614 PE=3 SV=1	[more]
A0A5D3CPT6	3.6e-51	95.50	Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1GDU9	1.8e-50	92.79	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111453258 PE=3 SV=...	[more]
A0A0A0KJW7	3.0e-50	94.59	Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_6G513730 PE=3 SV=1	[more]
A0A6J1CL79	5.2e-50	95.50	Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111012314 PE=3 SV...	[more]

BLAST of Lcy04g020270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439996.1	7.4e-51	95.50	PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_008439997.1 PREDICTED...	[more]
KAG6603779.1	1.6e-50	93.69	Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022950063.1	3.7e-50	92.79	autophagy-related protein 8C-like [Cucurbita moschata]	[more]
XP_004134765.1	6.2e-50	94.59	autophagy-related protein 8C [Cucumis sativus] >XP_011658146.1 autophagy-related...	[more]
XP_022142105.1	1.1e-49	95.50	autophagy-related protein 8C-like [Momordica charantia] >XP_022142106.1 autophag...	[more]

BLAST of Lcy04g020270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G05630.1	1.2e-46	84.26	Ubiquitin-like superfamily protein	[more]
AT2G05630.2	5.8e-46	84.76	Ubiquitin-like superfamily protein	[more]
AT4G21980.1	7.6e-46	82.24	Ubiquitin-like superfamily protein	[more]
AT4G21980.2	7.6e-46	82.24	Ubiquitin-like superfamily protein	[more]
AT1G62040.1	9.9e-46	81.48	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 17..120 e-value: 1.7E-49 score: 166.3
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 13..120
None	No IPR available	GENE3D	3.10.20.90		coord: 11..120 e-value: 7.1E-54 score: 183.0
None	No IPR available	PANTHER	PTHR10969:SF77	AUTOPHAGY-RELATED PROTEIN	coord: 13..120
None	No IPR available	CDD	cd16128	Ubl_ATG8	coord: 16..117 e-value: 7.30407E-70 score: 203.076
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 13..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g020270.1	Lcy04g020270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule