
Lcy04g013730 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAGGAAAAGGAAAAGGAAAAGGCGATGGAAATTTACAATGCAAAAAGTGGAAGCAGATTGCAGCTTGTTGTGGTGTTCATTTTGATGGTTCACGTTGCTTCATGTTTTGCAGAAGAACCCCACAAGGCTCCCGAGAGGCCCTCTTTTGGGAACTTCATTCACCAAAGTGTTGCCATTTTCAAGAAATCTCATCTCTCTCCTTGGGACAAGATGAAAAGTCTCCTCCACCAAATGCAGTTGCAGTTTTTTCCTCCTAATTTGGAGTAACTTTCTTAATTCCCTTATTCAATCTTCATAATCATTAATATTACATTTTCTCCATCATAAGATCTGCAATTTCATCATTTTGTTTTATGCAGTTTTAGGAGTAGAGATGATGAAACAAAAGGAATGGTTGATGAAATGAAAGAAGCAGTGGAGAGGAGCTTTGGGGTAAGCAAGCATGCAGTTGAGGGATCTGCTAAATCTGCAGCAAAAGCCATGGAGGAGGCAGTGGACAAAGTCAAAGAGAACCTCGTCGACAAGGACAAGGACCAACATGATGAGCTTTGATCTACCAACCACATCTAATTTCATTTCTTAACATTTTCTATCTATTTTTTCTTCTTTTTCTTTAGAATTTTTGCCTTGAATCCTTTACATCAAACTTAATTATATGAGTTGCCACCATTAAATTGTTCCGGCTAAAACTAGAAAACAAAATCACATTGCAAAATATATGATCTAAAAAGGCATGAGTACCAAC GAAAAGGAAAAGGAAAAGGAAAAGGCGATGGAAATTTACAATGCAAAAAGTGGAAGCAGATTGCAGCTTGTTGTGGTGTTCATTTTGATGGTTCACGTTGCTTCATGTTTTGCAGAAGAACCCCACAAGGCTCCCGAGAGGCCCTCTTTTGGGAACTTCATTCACCAAAGTGTTGCCATTTTCAAGAAATCTCATCTCTCTCCTTGGGACAAGATGAAAAGTCTCCTCCACCAAATGCAGTTGCAGTTTTTTCCTCCTAATTTGGATTTTAGGAGTAGAGATGATGAAACAAAAGGAATGGTTGATGAAATGAAAGAAGCAGTGGAGAGGAGCTTTGGGGTAAGCAAGCATGCAGTTGAGGGATCTGCTAAATCTGCAGCAAAAGCCATGGAGGAGGCAGTGGACAAAGTCAAAGAGAACCTCGTCGACAAGGACAAGGACCAACATGATGAGCTTTGATCTACCAACCACATCTAATTTCATTTCTTAACATTTTCTATCTATTTTTTCTTCTTTTTCTTTAGAATTTTTGCCTTGAATCCTTTACATCAAACTTAATTATATGAGTTGCCACCATTAAATTGTTCCGGCTAAAACTAGAAAACAAAATCACATTGCAAAATATATGATCTAAAAAGGCATGAGTACCAAC ATGGAAATTTACAATGCAAAAAGTGGAAGCAGATTGCAGCTTGTTGTGGTGTTCATTTTGATGGTTCACGTTGCTTCATGTTTTGCAGAAGAACCCCACAAGGCTCCCGAGAGGCCCTCTTTTGGGAACTTCATTCACCAAAGTGTTGCCATTTTCAAGAAATCTCATCTCTCTCCTTGGGACAAGATGAAAAGTCTCCTCCACCAAATGCAGTTGCAGTTTTTTCCTCCTAATTTGGATTTTAGGAGTAGAGATGATGAAACAAAAGGAATGGTTGATGAAATGAAAGAAGCAGTGGAGAGGAGCTTTGGGGTAAGCAAGCATGCAGTTGAGGGATCTGCTAAATCTGCAGCAAAAGCCATGGAGGAGGCAGTGGACAAAGTCAAAGAGAACCTCGTCGACAAGGACAAGGACCAACATGATGAGCTTTGA MEIYNAKSGSRLQLVVVFILMVHVASCFAEEPHKAPERPSFGNFIHQSVAIFKKSHLSPWDKMKSLLHQMQLQFFPPNLDFRSRDDETKGMVDEMKEAVERSFGVSKHAVEGSAKSAAKAMEEAVDKVKENLVDKDKDQHDEL Homology
BLAST of Lcy04g013730 vs. ExPASy TrEMBL
Match: A0A6J1GEE2 (uncharacterized protein LOC111453420 OS=Cucurbita moschata OX=3662 GN=LOC111453420 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.4e-48 Identity = 111/149 (74.50%), Postives = 126/149 (84.56%), Query Frame = 0
BLAST of Lcy04g013730 vs. ExPASy TrEMBL
Match: A0A6J1ILF3 (uncharacterized protein LOC111478091 OS=Cucurbita maxima OX=3661 GN=LOC111478091 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 4.2e-48 Identity = 110/151 (72.85%), Postives = 126/151 (83.44%), Query Frame = 0
BLAST of Lcy04g013730 vs. ExPASy TrEMBL
Match: A0A5D3CLZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005640 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.8e-44 Identity = 103/146 (70.55%), Postives = 124/146 (84.93%), Query Frame = 0
BLAST of Lcy04g013730 vs. ExPASy TrEMBL
Match: A0A1S3B154 (uncharacterized protein LOC103484692 OS=Cucumis melo OX=3656 GN=LOC103484692 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.8e-44 Identity = 103/146 (70.55%), Postives = 124/146 (84.93%), Query Frame = 0
BLAST of Lcy04g013730 vs. ExPASy TrEMBL
Match: A0A0A0KFX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487000 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.0e-42 Identity = 103/146 (70.55%), Postives = 121/146 (82.88%), Query Frame = 0
BLAST of Lcy04g013730 vs. NCBI nr
Match: XP_038881383.1 (uncharacterized protein LOC120072918 [Benincasa hispida]) HSP 1 Score: 205.3 bits (521), Expect = 3.5e-49 Identity = 113/145 (77.93%), Postives = 128/145 (88.28%), Query Frame = 0
BLAST of Lcy04g013730 vs. NCBI nr
Match: XP_023544688.1 (uncharacterized protein LOC111804199 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 204.1 bits (518), Expect = 7.8e-49 Identity = 112/147 (76.19%), Postives = 126/147 (85.71%), Query Frame = 0
BLAST of Lcy04g013730 vs. NCBI nr
Match: XP_022950287.1 (uncharacterized protein LOC111453420 [Cucurbita moschata]) HSP 1 Score: 202.2 bits (513), Expect = 3.0e-48 Identity = 111/149 (74.50%), Postives = 126/149 (84.56%), Query Frame = 0
BLAST of Lcy04g013730 vs. NCBI nr
Match: KAG6604241.1 (hypothetical protein SDJN03_04850, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 200.7 bits (509), Expect = 8.7e-48 Identity = 110/149 (73.83%), Postives = 125/149 (83.89%), Query Frame = 0
BLAST of Lcy04g013730 vs. NCBI nr
Match: XP_022977956.1 (uncharacterized protein LOC111478091 [Cucurbita maxima]) HSP 1 Score: 200.7 bits (509), Expect = 8.7e-48 Identity = 110/151 (72.85%), Postives = 126/151 (83.44%), Query Frame = 0
BLAST of Lcy04g013730 vs. TAIR 10
Match: AT5G64820.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09 Identity = 42/134 (31.34%), Postives = 67/134 (50.00%), Query Frame = 0
BLAST of Lcy04g013730 vs. TAIR 10
Match: AT1G16850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, leaf whorl, male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 1.4e-08 Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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