Lcy04g013650 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g013650
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein SLOW GREEN 1, chloroplastic
Location	Chr04: 45734540 .. 45737406 (-)
RNA-Seq Expression	Lcy04g013650
Synteny	Lcy04g013650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCAACTTCAGCTTTCTCAGTCTCTTCTCAAATTGAACTTCCTGGACCCAAATTCTCAAGCTACAAGGTCCGGGCATTGCCTAACTATCGGTTTACTGTTCTTCGGAAGAATTACAACCCAACTTCCAGAAGCTCGTTTCATTCAGTTACGAAAGATTTCCCTTCCCCCACTCACAATCGTCCCTTCTCAAAGCTCTCTGAATCCGATACACGTCGTTCTTCCGCACCCCAGAAAAATTTGTTCCAATATTTCGTTGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATTTTCATGGGTTGTTTCAATGTAAGATATACCATGGCGTTGCCTGCTCAGACAAGCAGCAAAAGCCCAACAATGGATGAAAAAGCTCAAGCTCCAGAGGATAGTGAAGAGGAAATGAGAGAGAGGATCTTGGAGCATGAGCCAAGGAATATTGACACTCTGAAAGTTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTCAGAGGCTGATTGATCTTGAGCCGGACGAGGATGAATGGAGGCTTTTGTTGGCTCTTTGTTATGAGACAATGGGGCAGCTGGACACGGCTAAAGGATTGTTCATGGAAATTTTGGAGAAGAAACCTCTATTGGTTAGAGCTCTGCATGTAAGGTTTTTCTTCAGATTAGTAGTTTTCGTTTTTGTATCATTTGGTGCGAATTATAAGCTGGAAAGTTTAGTGTGCTTGCTTAAATTTAGATGTTATCAGTGTATAGAAACAATGTGATGTTTGCTTTAGAGATTTTTTTGGCCAATTCGAACCCTGAACTGACTGAGGGTGCTTACTTATGAGATGAGTTCTTATTATTGAAAGCAATGTTGAGACGCCAGTTTTTGAGCAAGAACTGCTAGAAAATGACTTCTAAGAAAACAGTTAATATAGTTTTTTCTCTGTAGTCTTATTCTAACTTAAATTATATGAAGCTCGTTTAAGTTTTCTGAATTTGTTGTAGTTGCGAAGACAATTTTATTCTTTAGTTCGATAAATAACATTCAGACATGATTTAATACAAGATACTGCCTTATAAGCTTTTTAACCCCTCATGGGAAGATACTAATTGATAGGTTTGTGTGCAATAAAAAACTTCAAAGTTATGATCTCGTCTGTGAGAATCATGCCTTCTTAGCTTTCTCGCTGCAACTTTTTATAGCTTTCTCACAATTTCTTTAAGAAGTAAGTTATGCTAATGCATTGAATTCTTTGGATTTGAACTTTCTTCAGGGTCTGGCATTAGTGATGCATAAGAACAATGAAGGTCAATCTGTCTTTGAGATGCTCCATAAGGCTCTAGATATTGCTCGTGATGAGAAAAAAGTTACTGAGCAAAGAAGCATCGAAATACTAATTGCTCAAATGCATGTTGTGAAGGTCACTTGCTACTTATATTTATATTTTCTACGTTTGAACTAATAACTTTTTGGTTGAGTCCATGTTTTCCGTTTTCACTATGTTCAACCTGTGGGGTTTTCCTGCTTCTTAAATCGAATCCATCTACTTACAAGGGTGCAAATGTTTGGATGTCTGGTACTGGAAACTTATCCGTCTAACTGGCTGTGGTAATATGCATTTGAATTACTCCAAAAAGTTGTTAGAAACTAAAATTATGAAAGAGTGGAATGTATATTGACAAGCACAACATAAAATATTTCGTTATGTAATCCTATTTTTTGTGTTTAGGTGGTATAACCCTCAAAGTATACTAGAGTTTCTTTCCTAATTGCTAATATGTACTGTTTCATGGGTAAAGCTAAGATTTTGAGGGTCAACACAGATTGCTTGGAATTATGGCTAGAGAGAAATCACATAACTTTTATGGAAATGTGGAGATGGCAATGAAAATTTTGATATGGCTTTGTTAAGTAGTCTCTAGAGTCTAGATAGAGTTCCTTTTCTCTCTATTAAATTATTATTATTATTATTTTTTATCAATATTAGTTGTAGAGCTTTTCTGGAATTATTTTGGGTCTTCAAGTATTGCAGAATTTCTAATCTTTCTCCCCATGATTCTCTTGATTATTGTCCAACAAAACGTTTATGTCTTTCAGGGGGAACTGGAGGAGGGCTTGAAGAAGTTCCAAGGTCTTGTCGATGAAAACCCACGGGATTTTCGACCCTATCTTTGCCAGGTTCTGACAAATTTTGCACTTTACCTACCTCTTTTATCATTAATTTTGGATTAAGCCATCTCCACTCTCCATGTTTAATGCCCCAGCTTACAGGGCTACTACTTATTTGTCACATAAATATGGGGGAAACTCTACTTTTACTTTGTAGCGAACTAGTAAGTATATCTTTTGAAACTATTGGCGATGTCAACCAATAGAAGGATCTGCTCCAAAGATATGGTTGTTTGTACTTGGCCCTTTGATTATGTATGTTATGGGTTTGATTCAACTGAATAGTATCAACAGAGAATTGATGAGTGAGAACAGATATCGGAGGAGGTTCCGACCCTTATGTGTGAGATTTAGCCAATCATCGTATAGTAAGAAAAATGTTATCACTAGCTTCTTGAAGAGGATAATTGTCTTTGAAAAGAGTGCTCGAATGTTGAACTGGGAAGACATGCTTGGGAAAGGGAAATACTGAAATGAAGAATATCTAACTATATACATTTCTTGCAGGGAATTATATACAGTCTGCTGGACAAAAAAAAGGAAGCTGCGGAGCAGTTTGAGACGTATCGGACCCTCGTGCCTGATGAATTTCCTCAAAGGGAATTTATTGATGATGTTGTGTTGTCAGCTACAACTGCATCACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTTCATACAAGAAGTGA

mRNA sequence

ATGGGTTCAACTTCAGCTTTCTCAGTCTCTTCTCAAATTGAACTTCCTGGACCCAAATTCTCAAGCTACAAGGTCCGGGCATTGCCTAACTATCGGTTTACTGTTCTTCGGAAGAATTACAACCCAACTTCCAGAAGCTCGTTTCATTCAGTTACGAAAGATTTCCCTTCCCCCACTCACAATCGTCCCTTCTCAAAGCTCTCTGAATCCGATACACGTCGTTCTTCCGCACCCCAGAAAAATTTGTTCCAATATTTCGTTGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATTTTCATGGGTTGTTTCAATGTAAGATATACCATGGCGTTGCCTGCTCAGACAAGCAGCAAAAGCCCAACAATGGATGAAAAAGCTCAAGCTCCAGAGGATAGTGAAGAGGAAATGAGAGAGAGGATCTTGGAGCATGAGCCAAGGAATATTGACACTCTGAAAGTTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTCAGAGGCTGATTGATCTTGAGCCGGACGAGGATGAATGGAGGCTTTTGTTGGCTCTTTGTTATGAGACAATGGGGCAGCTGGACACGGCTAAAGGATTGTTCATGGAAATTTTGGAGAAGAAACCTCTATTGGTTAGAGCTCTGCATGGTCTGGCATTAGTGATGCATAAGAACAATGAAGGTCAATCTGTCTTTGAGATGCTCCATAAGGCTCTAGATATTGCTCGTGATGAGAAAAAAGTTACTGAGCAAAGAAGCATCGAAATACTAATTGCTCAAATGCATGTTGTGAAGGGGGAACTGGAGGAGGGCTTGAAGAAGTTCCAAGGTCTTGTCGATGAAAACCCACGGGATTTTCGACCCTATCTTTGCCAGGGAATTATATACAGTCTGCTGGACAAAAAAAAGGAAGCTGCGGAGCAGTTTGAGACGTATCGGACCCTCGTGCCTGATGAATTTCCTCAAAGGGAATTTATTGATGATGTTGTGTTGTCAGCTACAACTGCATCACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTTCATACAAGAAGTGA

Coding sequence (CDS)

ATGGGTTCAACTTCAGCTTTCTCAGTCTCTTCTCAAATTGAACTTCCTGGACCCAAATTCTCAAGCTACAAGGTCCGGGCATTGCCTAACTATCGGTTTACTGTTCTTCGGAAGAATTACAACCCAACTTCCAGAAGCTCGTTTCATTCAGTTACGAAAGATTTCCCTTCCCCCACTCACAATCGTCCCTTCTCAAAGCTCTCTGAATCCGATACACGTCGTTCTTCCGCACCCCAGAAAAATTTGTTCCAATATTTCGTTGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATTTTCATGGGTTGTTTCAATGTAAGATATACCATGGCGTTGCCTGCTCAGACAAGCAGCAAAAGCCCAACAATGGATGAAAAAGCTCAAGCTCCAGAGGATAGTGAAGAGGAAATGAGAGAGAGGATCTTGGAGCATGAGCCAAGGAATATTGACACTCTGAAAGTTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTCAGAGGCTGATTGATCTTGAGCCGGACGAGGATGAATGGAGGCTTTTGTTGGCTCTTTGTTATGAGACAATGGGGCAGCTGGACACGGCTAAAGGATTGTTCATGGAAATTTTGGAGAAGAAACCTCTATTGGTTAGAGCTCTGCATGGTCTGGCATTAGTGATGCATAAGAACAATGAAGGTCAATCTGTCTTTGAGATGCTCCATAAGGCTCTAGATATTGCTCGTGATGAGAAAAAAGTTACTGAGCAAAGAAGCATCGAAATACTAATTGCTCAAATGCATGTTGTGAAGGGGGAACTGGAGGAGGGCTTGAAGAAGTTCCAAGGTCTTGTCGATGAAAACCCACGGGATTTTCGACCCTATCTTTGCCAGGGAATTATATACAGTCTGCTGGACAAAAAAAAGGAAGCTGCGGAGCAGTTTGAGACGTATCGGACCCTCGTGCCTGATGAATTTCCTCAAAGGGAATTTATTGATGATGTTGTGTTGTCAGCTACAACTGCATCACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTTCATACAAGAAGTGA

Protein sequence

MGSTSAFSVSSQIELPGPKFSSYKVRALPNYRFTVLRKNYNPTSRSSFHSVTKDFPSPTHNRPFSKLSESDTRRSSAPQKNLFQYFVEKFVGFLVGSFIFMGCFNVRYTMALPAQTSSKSPTMDEKAQAPEDSEEEMRERILEHEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEPDEDEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEMLHKALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGIIYSLLDKKKEAAEQFETYRTLVPDEFPQREFIDDVVLSATTASREQFQKEFDAEFSYKK

Homology

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BLAST of Lcy04g013650 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 7.8e-40
Identity = 99/263 (37.64%), Postives = 156/263 (59.32%), Query Frame = 0


Query: 74  RSSAPQKNLFQYFVEKFVGF-----LVGSFIFM-GCFNVRYTMALPAQTSSKSPTMDEKA 133
           R+S+ Q +    F EKF  F     L+G+ + M G F+      LP +  S   T+++  
Sbjct: 39  RASSNQNSSGYCFPEKFKSFAKSAILIGAAVSMTGKFS-----TLPVKAESPVTTIEKTY 98

Query: 134 QAPEDSEEEMRE-----RILEHEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEPDE 193
           +  E  EE++ E      +L+  P  ++TL+ +L  K+  G+ EEA+K ++RL+  +P+E
Sbjct: 99  E--EVKEEKLSEITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEE 158

Query: 194 DEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEMLHK 253
            EW+ L+A     MG+ + A+ +F EIL++ PL   AL   AL+M ++ EG +V + L  
Sbjct: 159 TEWKFLMARLLGEMGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLED 218

Query: 254 ALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGIIYS 313
           AL +A  E  V E R + ++IAQ+H ++  ++E LK ++ L  E+P+DFRPY C+G+IYS
Sbjct: 219 ALAVAEAEYLVKEARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYS 278

Query: 314 LLDKKKEAAEQFETYRTLVPDEF 326
           LLDK  EA EQF  YR L P +F
Sbjct: 279 LLDKNVEAKEQFAKYRELSPKKF 294

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BLAST of Lcy04g013650 vs. ExPASy TrEMBL
Match: A0A6J1HF02 (protein SLOW GREEN 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463369 PE=4 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 3.7e-154
Identity = 290/358 (81.01%), Postives = 311/358 (86.87%), Query Frame = 0


Query: 1   MGSTSAFSVSSQIELPGPKFSSYKVRALPNYRFTVLRKNYNPTSRSSFHSVTKDFPSPTH 60
           MGS SAFSV S+IELPGPKFS Y VR  P +RFT+ RKNYNPTS+S  HS++K F S  H
Sbjct: 1   MGSISAFSVCSKIELPGPKFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNSHIH 60

Query: 61  NRPFSKLSESDTRRSSAPQKNLFQYFVEKFVGFLVGSFIFMGCFNVRYTMALPAQTSSKS 120
           + PFS LSESD R   A Q+N   YFVEK VGFLV  FIFMGCFNVR+ +ALPAQTS KS
Sbjct: 61  DAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTSGKS 120

Query: 121 PTMDEKAQAPEDSEEEMRERILEHEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEP 180
           PTMD      EDSEEEMRERILEH+ RNIDTLK VLYGKM SGKTEEAIKYV RLIDLEP
Sbjct: 121 PTMD------EDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEP 180

Query: 181 DEDEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEML 240
           DE EWRLLLALCYE MG+L+ AKGLF+EILEK PLLVRALHGLALVMHKNNEGQSVFEML
Sbjct: 181 DEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSVFEML 240

Query: 241 HKALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGII 300
           +KALDIARD KKVTEQRSI ILIAQMHVVKGELEEGLKKFQ LV+ENPRDFRPYLCQGII
Sbjct: 241 NKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGII 300

Query: 301 YSLLDKKKEAAEQFETYRTLVPDEFPQREFIDDVVLSATTASREQFQKEFDAEFSYKK 359
           YSLLD+K+EAAEQFETYR LVPDEFPQREF+DDV+LSATTA+REQFQKEFDAEFSYKK
Sbjct: 301 YSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYKK 352

[Close]

BLAST of Lcy04g013650 vs. ExPASy TrEMBL
Match: A0A6J1KST2 (protein SLOW GREEN 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497269 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.4e-153
Identity = 291/357 (81.51%), Postives = 310/357 (86.83%), Query Frame = 0


Query: 1   MGSTSAFSVSSQIELPGPKFSSYKVRALPNYRFTVLRKNYNPTSRSSFHSVTKDFPSPTH 60
           MGSTSAF V S+IELPGPKFSS  VR  P +RFT+ RKNYNPTS+S FHS++K F S  H
Sbjct: 1   MGSTSAFPVCSKIELPGPKFSSDNVRPSPKFRFTMFRKNYNPTSKSLFHSISKHFNSHIH 60

Query: 61  NRPFSKLSESDTRRSSAPQKNLFQYFVEKFVGFLVGSFIFMGCFNVRYTMALPAQTSSKS 120
           + PFSKLSESD R   A Q+N   YFVEK VGFLV  FIFMGCFNVR+ +AL AQTS KS
Sbjct: 61  DAPFSKLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALSAQTSGKS 120

Query: 121 PTMDEKAQAPEDSEEEMRERILEHEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEP 180
           PTMD      EDSEEEMRERILEH+ RNIDTLK VLYGKM SGKTEEAIKYV RLIDLEP
Sbjct: 121 PTMD------EDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEP 180

Query: 181 DEDEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEML 240
           DE EWRLLLALCYE MG+L+ AKGLFMEILEK PLLVRALHGLALVMHKNNEGQSVFEML
Sbjct: 181 DEVEWRLLLALCYEKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHKNNEGQSVFEML 240

Query: 241 HKALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGII 300
            KALDIARD KKVTEQRSI ILIAQMHVVKGELEEGLKKFQ LV+ENPRDFRPYLCQGII
Sbjct: 241 KKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGII 300

Query: 301 YSLLDKKKEAAEQFETYRTLVPDEFPQREFIDDVVLSATTASREQFQKEFDAEFSYK 358
           YSLL+KK+EAAEQFETYR LVPDEFPQREF+DDV+LSATTA+REQFQKEFDAEFSYK
Sbjct: 301 YSLLNKKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYK 351

[Close]

BLAST of Lcy04g013650 vs. ExPASy TrEMBL
Match: A0A5D3CPL4 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005710 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 7.1e-153
Identity = 289/357 (80.95%), Postives = 318/357 (89.08%), Query Frame = 0


Query: 3   STSAFSVSSQIELPG-PKFSSYKVRALPNYRFTVLRKNYNPTSRSSFHSVTKDFPSPTHN 62
           STSAFSVSSQIELPG PKFSSY VRAL N+RF++L+KNY  +S+S F+S  K F SP HN
Sbjct: 5   STSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYS-PKIFHSPIHN 64

Query: 63  RPFSKLSESDTRRSSAPQKNLFQYFVEKFVGFLVGSFIFMGCFNVRYTMALPAQTSSKSP 122
             FS LSESD RRS++PQ  L +Y VEKFVGFLVGSFIFMGCFN+RY  ALPAQTSSK+P
Sbjct: 65  TLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTSSKNP 124

Query: 123 TMDEKAQAPEDSEEEMRERILEHEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEPD 182
           T+ EKAQ PE   EEM ERILEH+P N+DTLK VLYGKMRSGKTEEAIKYV+RLIDLEPD
Sbjct: 125 TLAEKAQIPEGDSEEMWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLIDLEPD 184

Query: 183 EDEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEMLH 242
           E EWRLLLALCYET+G+L TAK LFMEIL++KPLLVRALHGLALVMHKNNEG+SVFEML+
Sbjct: 185 EVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFEMLN 244

Query: 243 KALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGIIY 302
           KALDIARDEKK+ E RSI ILIAQMHVVKGELEEGLKKFQ LV+ENPRDFRP+LCQGIIY
Sbjct: 245 KALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIY 304

Query: 303 SLLDKKKEAAEQFETYRTLVPDEFPQREFIDDVVLSATTASREQFQKEFDAEFSYKK 359
           SLLDKKKEAAEQFE Y+ LVPDEFPQREFIDD++LSATTASREQFQKEFDAEF+ KK
Sbjct: 305 SLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTNKK 360

[Close]

BLAST of Lcy04g013650 vs. ExPASy TrEMBL
Match: A0A1S3B0E6 (LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484686 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 7.1e-153
Identity = 289/357 (80.95%), Postives = 318/357 (89.08%), Query Frame = 0


Query: 3   STSAFSVSSQIELPG-PKFSSYKVRALPNYRFTVLRKNYNPTSRSSFHSVTKDFPSPTHN 62
           STSAFSVSSQIELPG PKFSSY VRAL N+RF++L+KNY  +S+S F+S  K F SP HN
Sbjct: 5   STSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYS-PKIFHSPIHN 64

Query: 63  RPFSKLSESDTRRSSAPQKNLFQYFVEKFVGFLVGSFIFMGCFNVRYTMALPAQTSSKSP 122
             FS LSESD RRS++PQ  L +Y VEKFVGFLVGSFIFMGCFN+RY  ALPAQTSSK+P
Sbjct: 65  TLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTSSKNP 124

Query: 123 TMDEKAQAPEDSEEEMRERILEHEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEPD 182
           T+ EKAQ PE   EEM ERILEH+P N+DTLK VLYGKMRSGKTEEAIKYV+RLIDLEPD
Sbjct: 125 TLAEKAQIPEGDSEEMWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLIDLEPD 184

Query: 183 EDEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEMLH 242
           E EWRLLLALCYET+G+L TAK LFMEIL++KPLLVRALHGLALVMHKNNEG+SVFEML+
Sbjct: 185 EVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFEMLN 244

Query: 243 KALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGIIY 302
           KALDIARDEKK+ E RSI ILIAQMHVVKGELEEGLKKFQ LV+ENPRDFRP+LCQGIIY
Sbjct: 245 KALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIY 304

Query: 303 SLLDKKKEAAEQFETYRTLVPDEFPQREFIDDVVLSATTASREQFQKEFDAEFSYKK 359
           SLLDKKKEAAEQFE Y+ LVPDEFPQREFIDD++LSATTASREQFQKEFDAEF+ KK
Sbjct: 305 SLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTNKK 360

[Close]

BLAST of Lcy04g013650 vs. ExPASy TrEMBL
Match: A0A6J1BU39 (protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005371 PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.6e-152
Identity = 293/357 (82.07%), Postives = 310/357 (86.83%), Query Frame = 0


Query: 3   STSAFSVSSQIELPGPKFSSYKVRALPNYRFTVLRKNYNPTSRSSFHSVTKDFPSPTHNR 62
           STSAF V SQI LPGPK SSY VR  PN RF  LRKNYN        +V K F  PT N 
Sbjct: 5   STSAFLVCSQIILPGPKVSSYNVRKSPNSRFIGLRKNYN--------AVAKFFHFPTLNP 64

Query: 63  PFSKLSESDTRRSSAPQKNLFQYFVEKFVGFLVGSFIFMGCFNVRYTMALPAQTSSKSPT 122
           P SKLSESD+ RSS  Q+NL +YF+EKFV  L+GSFIFMGCFNVRY MALPAQ SSKSPT
Sbjct: 65  PVSKLSESDSCRSSPSQRNLSKYFLEKFVALLIGSFIFMGCFNVRYAMALPAQRSSKSPT 124

Query: 123 MDEKAQA-PEDSEEEMRERILEHEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEPD 182
           +DEK     EDSEEEMRERILEHEPRNIDTLK VLYGKMRSGKT+EAIKYVQRLIDLEP+
Sbjct: 125 LDEKTDTLSEDSEEEMRERILEHEPRNIDTLKAVLYGKMRSGKTKEAIKYVQRLIDLEPE 184

Query: 183 EDEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEMLH 242
           E EWRLL+ALCYETMGQLDTAK LFMEILEKKPLLVRALHGLALVMHKN EGQSVF+ML+
Sbjct: 185 EVEWRLLMALCYETMGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNKEGQSVFDMLN 244

Query: 243 KALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGIIY 302
           KALDIARDEKKVTEQRSI ILIAQMHVVKGELEEGLKKFQ LVDENPRDFRPYLCQGIIY
Sbjct: 245 KALDIARDEKKVTEQRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGIIY 304

Query: 303 SLLDKKKEAAEQFETYRTLVPDEFPQREFIDDVVLSATTASREQFQKEFDAEFSYKK 359
           SLLDKK+EAAEQFE YR +VPDEFPQ+EFIDD+VLSATTASREQF+KEF AEFSYKK
Sbjct: 305 SLLDKKREAAEQFEMYRAVVPDEFPQKEFIDDIVLSATTASREQFEKEFAAEFSYKK 353

[Close]

BLAST of Lcy04g013650 vs. NCBI nr
Match: XP_038880966.1 (protein SLOW GREEN 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 566.2 bits (1458), Expect = 2.0e-157
Identity = 299/358 (83.52%), Postives = 322/358 (89.94%), Query Frame = 0


Query: 3   STSAFSVSSQIE-LPGPKFSSYKVRALPNYRFTVLRKNYNPTSRSSFHSVTKDFPSPTHN 62
           STSAFSVSSQIE L GPKFSSY VRALPN RF++L+KN+ PTS+S F+S  K+F SP HN
Sbjct: 5   STSAFSVSSQIELLHGPKFSSYNVRALPNCRFSILQKNHKPTSQSLFYSAAKNFHSPIHN 64

Query: 63  RPFSKLSESDTRRSSAPQKNLFQYFVEKFVGFLVGSFIFMGCFNVRYTMALPAQTSSKSP 122
            PFS LSESD RRS++ Q  + +++VE+FVGFLVGSFIFMGCFNVRY  ALP QTSSK+P
Sbjct: 65  PPFSNLSESDIRRSTSTQIKIHKHYVERFVGFLVGSFIFMGCFNVRYARALPTQTSSKNP 124

Query: 123 TMDEKAQA-PEDSEEEMRERILEHEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEP 182
           TM EK+QA  EDSEEEMRERILEH+P NIDTLK VLYGKMRSGKTEEAIKYV+RLIDLEP
Sbjct: 125 TMAEKSQALEEDSEEEMRERILEHDPSNIDTLKAVLYGKMRSGKTEEAIKYVKRLIDLEP 184

Query: 183 DEDEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEML 242
           DE EWRLLLAL YET GQLDTAK LFMEILEKKPLLVRALHGLALVMHKNNEG+SVFEML
Sbjct: 185 DEVEWRLLLALYYETFGQLDTAKTLFMEILEKKPLLVRALHGLALVMHKNNEGESVFEML 244

Query: 243 HKALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGII 302
           +KAL IARDEKK+TEQRSI ILIAQMHVVKGELEEGLKKFQ LVDENPRDFRPYLCQGII
Sbjct: 245 NKALAIARDEKKLTEQRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLCQGII 304

Query: 303 YSLLDKKKEAAEQFETYRTLVPDEFPQREFIDDVVLSATTASREQFQKEFDAEFSYKK 359
           YSLLDKKKEAAEQFE YR LVPDEFPQREFIDDVVL+A TASREQFQKEFDAEF +KK
Sbjct: 305 YSLLDKKKEAAEQFEAYRALVPDEFPQREFIDDVVLAAMTASREQFQKEFDAEFMHKK 362

[Close]

BLAST of Lcy04g013650 vs. NCBI nr
Match: XP_022963051.1 (protein SLOW GREEN 1, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 554.3 bits (1427), Expect = 7.7e-154
Identity = 290/358 (81.01%), Postives = 311/358 (86.87%), Query Frame = 0


Query: 1   MGSTSAFSVSSQIELPGPKFSSYKVRALPNYRFTVLRKNYNPTSRSSFHSVTKDFPSPTH 60
           MGS SAFSV S+IELPGPKFS Y VR  P +RFT+ RKNYNPTS+S  HS++K F S  H
Sbjct: 1   MGSISAFSVCSKIELPGPKFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNSHIH 60

Query: 61  NRPFSKLSESDTRRSSAPQKNLFQYFVEKFVGFLVGSFIFMGCFNVRYTMALPAQTSSKS 120
           + PFS LSESD R   A Q+N   YFVEK VGFLV  FIFMGCFNVR+ +ALPAQTS KS
Sbjct: 61  DAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTSGKS 120

Query: 121 PTMDEKAQAPEDSEEEMRERILEHEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEP 180
           PTMD      EDSEEEMRERILEH+ RNIDTLK VLYGKM SGKTEEAIKYV RLIDLEP
Sbjct: 121 PTMD------EDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEP 180

Query: 181 DEDEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEML 240
           DE EWRLLLALCYE MG+L+ AKGLF+EILEK PLLVRALHGLALVMHKNNEGQSVFEML
Sbjct: 181 DEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSVFEML 240

Query: 241 HKALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGII 300
           +KALDIARD KKVTEQRSI ILIAQMHVVKGELEEGLKKFQ LV+ENPRDFRPYLCQGII
Sbjct: 241 NKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGII 300

Query: 301 YSLLDKKKEAAEQFETYRTLVPDEFPQREFIDDVVLSATTASREQFQKEFDAEFSYKK 359
           YSLLD+K+EAAEQFETYR LVPDEFPQREF+DDV+LSATTA+REQFQKEFDAEFSYKK
Sbjct: 301 YSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYKK 352

[Close]

BLAST of Lcy04g013650 vs. NCBI nr
Match: KAG6595098.1 (protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 552.7 bits (1423), Expect = 2.2e-153
Identity = 290/358 (81.01%), Postives = 311/358 (86.87%), Query Frame = 0


Query: 1   MGSTSAFSVSSQIELPGPKFSSYKVRALPNYRFTVLRKNYNPTSRSSFHSVTKDFPSPTH 60
           MGSTSAFSV S+IELP PKFS Y VR  P +RFT+ RKNYNPTS+S  HS++K F S  H
Sbjct: 1   MGSTSAFSVFSKIELPVPKFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNSHIH 60

Query: 61  NRPFSKLSESDTRRSSAPQKNLFQYFVEKFVGFLVGSFIFMGCFNVRYTMALPAQTSSKS 120
           + PFS LSESD R   A Q+N   YFVEK VGFLV  FIFMGCFNVR+ +ALPAQTS KS
Sbjct: 61  DAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTSGKS 120

Query: 121 PTMDEKAQAPEDSEEEMRERILEHEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEP 180
           PTMD      EDSEEEMRERILEH+ RNIDTLK VLYGKM SGKTEEAIKYV RLIDLEP
Sbjct: 121 PTMD------EDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEP 180

Query: 181 DEDEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEML 240
           DE EWRLLLALCYE MG+L+ AKGLF+EILEK PLLVRALHGLALVMHKNNEGQSVFEML
Sbjct: 181 DEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSVFEML 240

Query: 241 HKALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGII 300
           +KALDIARD KKVTEQRSI ILIAQMHVVKGELEEGLKKFQ LV+ENPRDFRPYLCQGII
Sbjct: 241 NKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGII 300

Query: 301 YSLLDKKKEAAEQFETYRTLVPDEFPQREFIDDVVLSATTASREQFQKEFDAEFSYKK 359
           YSLLD+K+EAAEQFETYR LVPDEFPQREF+DDV+LSATTA+REQFQKEFDAEFSYKK
Sbjct: 301 YSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYKK 352

[Close]

BLAST of Lcy04g013650 vs. NCBI nr
Match: XP_023003795.1 (protein SLOW GREEN 1, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 551.6 bits (1420), Expect = 5.0e-153
Identity = 291/357 (81.51%), Postives = 310/357 (86.83%), Query Frame = 0


Query: 1   MGSTSAFSVSSQIELPGPKFSSYKVRALPNYRFTVLRKNYNPTSRSSFHSVTKDFPSPTH 60
           MGSTSAF V S+IELPGPKFSS  VR  P +RFT+ RKNYNPTS+S FHS++K F S  H
Sbjct: 1   MGSTSAFPVCSKIELPGPKFSSDNVRPSPKFRFTMFRKNYNPTSKSLFHSISKHFNSHIH 60

Query: 61  NRPFSKLSESDTRRSSAPQKNLFQYFVEKFVGFLVGSFIFMGCFNVRYTMALPAQTSSKS 120
           + PFSKLSESD R   A Q+N   YFVEK VGFLV  FIFMGCFNVR+ +AL AQTS KS
Sbjct: 61  DAPFSKLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALSAQTSGKS 120

Query: 121 PTMDEKAQAPEDSEEEMRERILEHEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEP 180
           PTMD      EDSEEEMRERILEH+ RNIDTLK VLYGKM SGKTEEAIKYV RLIDLEP
Sbjct: 121 PTMD------EDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLIDLEP 180

Query: 181 DEDEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEML 240
           DE EWRLLLALCYE MG+L+ AKGLFMEILEK PLLVRALHGLALVMHKNNEGQSVFEML
Sbjct: 181 DEVEWRLLLALCYEKMGELEMAKGLFMEILEKNPLLVRALHGLALVMHKNNEGQSVFEML 240

Query: 241 HKALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGII 300
            KALDIARD KKVTEQRSI ILIAQMHVVKGELEEGLKKFQ LV+ENPRDFRPYLCQGII
Sbjct: 241 KKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLCQGII 300

Query: 301 YSLLDKKKEAAEQFETYRTLVPDEFPQREFIDDVVLSATTASREQFQKEFDAEFSYK 358
           YSLL+KK+EAAEQFETYR LVPDEFPQREF+DDV+LSATTA+REQFQKEFDAEFSYK
Sbjct: 301 YSLLNKKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSYK 351

[Close]

BLAST of Lcy04g013650 vs. NCBI nr
Match: XP_008440127.1 (PREDICTED: LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic [Cucumis melo] >TYK12974.1 protein SLOW GREEN 1 [Cucumis melo var. makuwa])

HSP 1 Score: 550.1 bits (1416), Expect = 1.5e-152
Identity = 289/357 (80.95%), Postives = 318/357 (89.08%), Query Frame = 0


Query: 3   STSAFSVSSQIELPG-PKFSSYKVRALPNYRFTVLRKNYNPTSRSSFHSVTKDFPSPTHN 62
           STSAFSVSSQIELPG PKFSSY VRAL N+RF++L+KNY  +S+S F+S  K F SP HN
Sbjct: 5   STSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYS-PKIFHSPIHN 64

Query: 63  RPFSKLSESDTRRSSAPQKNLFQYFVEKFVGFLVGSFIFMGCFNVRYTMALPAQTSSKSP 122
             FS LSESD RRS++PQ  L +Y VEKFVGFLVGSFIFMGCFN+RY  ALPAQTSSK+P
Sbjct: 65  TLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTSSKNP 124

Query: 123 TMDEKAQAPEDSEEEMRERILEHEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEPD 182
           T+ EKAQ PE   EEM ERILEH+P N+DTLK VLYGKMRSGKTEEAIKYV+RLIDLEPD
Sbjct: 125 TLAEKAQIPEGDSEEMWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLIDLEPD 184

Query: 183 EDEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEMLH 242
           E EWRLLLALCYET+G+L TAK LFMEIL++KPLLVRALHGLALVMHKNNEG+SVFEML+
Sbjct: 185 EVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFEMLN 244

Query: 243 KALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGIIY 302
           KALDIARDEKK+ E RSI ILIAQMHVVKGELEEGLKKFQ LV+ENPRDFRP+LCQGIIY
Sbjct: 245 KALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIY 304

Query: 303 SLLDKKKEAAEQFETYRTLVPDEFPQREFIDDVVLSATTASREQFQKEFDAEFSYKK 359
           SLLDKKKEAAEQFE Y+ LVPDEFPQREFIDD++LSATTASREQFQKEFDAEF+ KK
Sbjct: 305 SLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTNKK 360

[Close]

BLAST of Lcy04g013650 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 291.2 bits (744), Expect = 1.1e-78
Identity = 152/298 (51.01%), Postives = 213/298 (71.48%), Query Frame = 0


Query: 58  PTHNRPFSKLSESDTRRSSAPQKNLFQYFVEKFVGFLVGSFIFMGCFNVRYTMALPAQTS 117
           P +  P   L  S T  S    K+  Q    K    LVGSF+F+G  + +  +ALP  T 
Sbjct: 53  PDNFAPPLPLIRSST--SLLSSKDFVQMLARKAAILLVGSFVFLGFCSSKPALALPTATV 112

Query: 118 SKSPTMDEKAQAPEDSEEEMRERILEHEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLID 177
                ++         +E+M E++LE+EP N++ +K V+Y KMR GK E+A+KYV++L+ 
Sbjct: 113 VSQAELE---------DEKMFEKLLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMK 172

Query: 178 LEPDEDEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEGQSVF 237
           LEP E EW+LL ALCYETMG+L  AK L+ +IL+++PLL+RALHGLA+VMHK ++  SVF
Sbjct: 173 LEPHEVEWKLLEALCYETMGELSKAKRLYKDILKEQPLLIRALHGLAMVMHKTHD-TSVF 232

Query: 238 EMLHKALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQ 297
           +ML +A+++AR   +VTE+R+I++LI QMH+V+G+ EEGLK FQ +V++NPRDFRPYLCQ
Sbjct: 233 DMLIEAMEVARQGNRVTEERNIQVLIGQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQ 292

Query: 298 GIIYSLLDKKKEAAEQFETYRTLVPDEFPQREFIDDVVLSATTASREQFQKEFDAEFS 356
           GI+YSL+DKK+EAA+QFE Y +LVP EFPQ+ F+DDV L+A   SRE+ Q  F A+F+
Sbjct: 293 GIVYSLMDKKEEAAQQFEIYWSLVPGEFPQKGFLDDVALAAQAKSRERLQNTFKAKFT 338

[Close]

BLAST of Lcy04g013650 vs. TAIR 10
Match: AT3G18420.1 (Protein prenylyltransferase superfamily protein )

HSP 1 Score: 166.0 bits (419), Expect = 5.5e-41
Identity = 99/263 (37.64%), Postives = 156/263 (59.32%), Query Frame = 0


Query: 74  RSSAPQKNLFQYFVEKFVGF-----LVGSFIFM-GCFNVRYTMALPAQTSSKSPTMDEKA 133
           R+S+ Q +    F EKF  F     L+G+ + M G F+      LP +  S   T+++  
Sbjct: 39  RASSNQNSSGYCFPEKFKSFAKSAILIGAAVSMTGKFS-----TLPVKAESPVTTIEKTY 98

Query: 134 QAPEDSEEEMRE-----RILEHEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEPDE 193
           +  E  EE++ E      +L+  P  ++TL+ +L  K+  G+ EEA+K ++RL+  +P+E
Sbjct: 99  E--EVKEEKLSEITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEE 158

Query: 194 DEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEMLHK 253
            EW+ L+A     MG+ + A+ +F EIL++ PL   AL   AL+M ++ EG +V + L  
Sbjct: 159 TEWKFLMARLLGEMGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLED 218

Query: 254 ALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGIIYS 313
           AL +A  E  V E R + ++IAQ+H ++  ++E LK ++ L  E+P+DFRPY C+G+IYS
Sbjct: 219 ALAVAEAEYLVKEARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYS 278

Query: 314 LLDKKKEAAEQFETYRTLVPDEF 326
           LLDK  EA EQF  YR L P +F
Sbjct: 279 LLDKNVEAKEQFAKYRELSPKKF 294

[Close]

BLAST of Lcy04g013650 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 159.8 bits (403), Expect = 4.0e-39
Identity = 111/335 (33.13%), Postives = 175/335 (52.24%), Query Frame = 0


Query: 36  LRKNYNPTSRSSFHSVTKDFPS---PTHNRPFSKLSESDTRRSSA---------PQKNLF 95
           L+ ++ P   S  H+ +  FP     +  +P S L  +  + SS+         P+   F
Sbjct: 7   LQLHHQPFHLSFTHTSSSTFPKNLFKSSIQPISSLKSASIKASSSKFQNSITPLPKSTPF 66

Query: 96  QYFVEKFVGFLVGSFIFMGCFNVRYTMALPAQTSSKSPTMDEKAQAPEDSEEEMRERILE 155
           + F    +     + + +   N+       A   +  P+++ K     + EE   +  L 
Sbjct: 67  RLFKSTCITLTTAAALLLA--NLHLKSPAIAAPIAPPPSVESKENVTLEEEERALDEHLI 126

Query: 156 HEPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEPDEDEWRLLLALCYETMGQLDTAK 215
             P ++D L+ ++  K++S K  EA++ + RLI LEP+E EW +L A  +   G LD AK
Sbjct: 127 THPSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKANIFTYSGDLDLAK 186

Query: 216 GLFMEILEKKPLLVRALHGLALVMHKNNEGQSVFEM---LHKALDIARDEKKVTEQRSIE 275
             F EIL K PL V A HG  L+M  ++ G  + E+   + +A+   + E    + R  +
Sbjct: 187 TGFEEILAKDPLRVEAYHG--LLMAYSDAGLDLKEVESRIEEAMLKCKKENNQNDFRDFK 246

Query: 276 ILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGIIYSLLDKKKEAAEQFETYRTL 335
           +L+AQ+ V++G+  E LK +Q LV E PRDFRPYLCQGIIY+LL KK +A EQF+ +R L
Sbjct: 247 LLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKKDKAEEQFDNFRKL 306

Query: 336 VPDEFPQREFIDDVVLSATTASREQFQKEFDAEFS 356
           VP   P RE+  D ++ AT    E+ Q+E   E +
Sbjct: 307 VPKNHPYREYFMDNMI-ATKLFSEKAQREMAEEMA 336

[Close]

BLAST of Lcy04g013650 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 5.2e-39
Identity = 100/277 (36.10%), Postives = 159/277 (57.40%), Query Frame = 0


Query: 75  SSAPQKNLFQYFVEKFVGFLVGSFIFMGCFNVRYTMALPAQTSSKSPTMDEKAQAPEDSE 134
           SS  Q +         V F   + +F+    ++ + A+ A  ++ +P M+   Q+  +  
Sbjct: 53  SSKSQDSKLSILKSTCVSFTAAAALFLVNLQLKPSPAIAAPVAA-TPLMESLKQSNGNVS 112

Query: 135 EEMRERILEH----EPRNIDTLKVVLYGKMRSGKTEEAIKYVQRLIDLEPDEDEWRLLLA 194
            E  ER LE      P +++ L+ ++  +++S K  EAI+ + RLI+LEP+E EW +L A
Sbjct: 113 FEEEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKA 172

Query: 195 LCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNNEG-QSVFEMLHKALDIARD 254
             +   G L++AK  F EIL K PL V A HGL +    + +   +V + + +A+   + 
Sbjct: 173 NIFSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKK 232

Query: 255 EKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRDFRPYLCQGIIYSLLDKKKE 314
           EK   + R  ++L+AQ+ V++G+  E LK ++ LV E PRDFRPYLCQGIIY++L K+ E
Sbjct: 233 EKNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENE 292

Query: 315 AAEQFETYRTLVPDEFPQRE-FIDDVVLSATTASREQ 346
           A +QFE +R LVP   P RE F+D++V S   A + Q
Sbjct: 293 AEKQFEKFRRLVPKNHPYREYFMDNMVASKLFAEKVQ 328

[Close]

BLAST of Lcy04g013650 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 1.6e-35
Identity = 82/227 (36.12%), Postives = 136/227 (59.91%), Query Frame = 0


Query: 113 PAQTSSKSPTMDEKAQAPEDSEEEMR-ERILEHEPRNIDTLKVVLYGKMRSGKTEEAIKY 172
           P  +++   T D+ +  P++ EEE   E+ L   P +++ L+ ++  K ++   + A++ 
Sbjct: 92  PPPSTAADLTSDQISSRPKEEEEEAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEI 151

Query: 173 VQRLIDLEPDEDEWRLLLALCYETMGQLDTAKGLFMEILEKKPLLVRALHGLALVMHKNN 232
           + RLI+++P+E EWR+L A      G  D+A   F E+L K P  V A HGL +   ++ 
Sbjct: 152 LNRLIEIQPEEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFRVEAYHGLVMAYSESE 211

Query: 233 EGQSVFE-MLHKALDIARDEKKVTEQRSIEILIAQMHVVKGELEEGLKKFQGLVDENPRD 292
              S  E  +++A++  + E K  + R   +LIAQ+ V+KG   E L+ +Q LV + P+D
Sbjct: 212 SKLSEIESRINEAIEKCKKENK-KDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKD 271

Query: 293 FRPYLCQGIIYSLLDKKKEAAEQFETYRTLVPDEFPQREFIDDVVLS 338
           FRPYLCQG+IY+L+ KK EA +QF  +R LVP+  P +E++D  VL+
Sbjct: 272 FRPYLCQGLIYTLMKKKDEAEKQFAEFRRLVPENHPYKEYLDANVLN 317

The following BLAST results are available for this feature:

BLAST of Lcy04g013650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS48	7.8e-40	37.64	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ...	[more]

BLAST of Lcy04g013650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HF02	3.7e-154	81.01	protein SLOW GREEN 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KST2	2.4e-153	81.51	protein SLOW GREEN 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5D3CPL4	7.1e-153	80.95	Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255...	[more]
A0A1S3B0E6	7.1e-153	80.95	LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656...	[more]
A0A6J1BU39	1.6e-152	82.07	protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110053...	[more]

BLAST of Lcy04g013650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880966.1	2.0e-157	83.52	protein SLOW GREEN 1, chloroplastic [Benincasa hispida]	[more]
XP_022963051.1	7.7e-154	81.01	protein SLOW GREEN 1, chloroplastic isoform X2 [Cucurbita moschata]	[more]
KAG6595098.1	2.2e-153	81.01	protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_023003795.1	5.0e-153	81.51	protein SLOW GREEN 1, chloroplastic isoform X2 [Cucurbita maxima]	[more]
XP_008440127.1	1.5e-152	80.95	PREDICTED: LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic [Cucumis mel...	[more]

BLAST of Lcy04g013650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39470.1	1.1e-78	51.01	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G18420.1	5.5e-41	37.64	Protein prenylyltransferase superfamily protein	[more]
AT3G53560.1	4.0e-39	33.13	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G37400.1	5.2e-39	36.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	1.6e-35	36.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14559	TPR_19	coord: 161..220 e-value: 5.4E-9 score: 36.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..73
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 13..350
None	No IPR available	PANTHER	PTHR26312:SF137	OS05G0182100 PROTEIN	coord: 13..350
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 125..339 e-value: 1.3E-22 score: 82.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 160..329

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g013650.1	Lcy04g013650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding