Lcy04g010620 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g010620
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein MODIFIER OF SNC1 11-like
Location	Chr04: 41999973 .. 42003504 (-)
RNA-Seq Expression	Lcy04g010620
Synteny	Lcy04g010620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCCGTGCCCAAATCCTTTCACGCTGCAATTCTCCTCTGTAGCGTTCGTTGTTCGCAAGCTCTCTCCGATTAGGTTTTAGGTCTCAAATCTCAAATCTGCTCCTCCAATGGCGACGGTAGCATCTGCAGGACTCAATGACATCAGCAATAGCAAGAATCCGCTTGGAGAAAACCCTAGTCAAACCCTAGACCCGACGATTTCTTCCTCCGCTCAGCCTCCTGCCACCGTTCCGCCGTCGTCAACTGATGGTGGGGCTTCCAAGGAAAGGGATGAATCAAAGGGCTCCGCTAAGGCGTCGGTTGAAGGGGACGGTGCACCGGTTTCTGATATCCAGAGGAAAATGCGCCGTGCCGAGCGTTTTGGCATTTCAGTGCAATTGTCTGAAGAAGAAAAGCGCAATTCTCGAGCGGAACGGTAACTCTATTTTTTGGTTATTGCTCTTCGCTGCATGTCTGTGTTTGCTTCCTCGTGTCTTTACGTATTTGAATCCATTTTTTCTTGGAAGATCATGCCATAATTTAGAGTTATTTTCTTATGATTGTTTTGAATCTGTCTAGTTCAGATGTAGTGATAAGTTACTGGTGTAGATATTACGTTAGTGTGCACAAGGACGAAAAGATTCTTTATGTCGACCCAGTACTTATGAAGCTGACAACCTGCCTGAGTAGCGATCTTAACAAACTTAAAAATTCATATATTTCCCGTCATAGGTTAGAGTGATGGTTTGCTTATGTAGTTACGAGATCGTTGGGAACTTGTAGATTATAATTTTCTGGAGCATATCAACCCTGTATCATTATTTAGTCCGATGTATCGATTTTAATGCCCAATCTAATTGTTCATATTCTGGTAGTGGCTCGAAATTCTACTCGGAATGGTGTAATTTGAAATCCGAAATAATTGCAGAGGCTTATTGTCATATGTCTAATATCAAAATTCGAGGAAAGTTGCAGTCCTCTCTCTATCTCTCTCTTATCTCTTCTCAAGTGAAATTTGAGACCATTTGTTATTCTCTTTGCAACTGTCTCGGTGCTTCCCTAATTGTGCCTCTCACTGCACGTAGCAGCTATTCTGTGGCGATCCTTTAGTTATGAGAGCTTCGTGGTCTTGTATTGTCTATGGTGTTTTGTGGGAAGTTTGGTTTGAAGGAACTGCTAAAATCTTCAAAGATAAGTTGATAAATTGGGACCTGGTGTGGGAATTAATTCATTTTTTGGGCTTATATTGGTGTTCTCTTTCTTCTCATTTCTATAATTTAAATATTCACCTTTTTCTTTATTTTTCCTAGTTCTGTTAAGAGTCACGTTTCTCTTTTATTTTTCTGTTAAATATCTTTAAAGTTGATTGTTGGGGACGATTGCAGGTTTGGTATGGGTACCACAACAAATGGATTGGGAGCATCAAATAAGTCAGAGGAGGTGAAGAGAAAGGCCAGAGCTGAGAGGTATATATGTCTTTATGGATCGATAGCTCACCCTGTCAAAAAAATCGTATTTATTGACTTCTACTCTATCATCTCTTCTTTCAAGATTTTGCTAATCTTTTTGGTTATTTAGATTTGGGCTTTCTGCATCTGTGACTACTGATGATGAGGCAAAGAAGAAAGCTCGTCTTGCTAGGTTTTCATCAACATCAAAGCCAGATCCCCAGGAGGAAGAAAAGAGGAAAGCAAGGGCAATCAGGTACTGGGCTTGGATTTTTTGTTTCCCTGATTGTAGCTCATTGCTTCCAGTTCTATCATCTATGCCTCATGGAGATTGTATATGGAGCGTATAAACAATTGAATGCATCTAACTTATTGTTTGTTTTTCCCTTTACTTTCTGGGTGAAGGTTTTCTAATCCAACTTCGAACTCTCTCACACAAGTGGATGGGAAGGGAAATGCTGAGACGGTAATTTATCCTTTTAATGTTTCTTTTGCTATCTAGGAGGATTTAGGAAATGTTAGTGTACTTGTCTCCAATGCTCTTGCTCCCATTGATGAATCCCATTGTTTGTATTCAGATTGCAGATATTGCTGGCAAGGCTGGAGGTGGTGCCTGAAAAGATCCTTCCCTTCTGATGGCAAGATAGCTTTTGCTTGTAAATTTTTTTGTGGTTCGTGTTTCCTTTTTTATTTTTAAAATCTGATTGGCATTAAGCCTGCAGAAGTTACATCTTATCCAAATCTATAATGTGTTGTTTAATCTAACGATTGATTTCTTTCTATGGCAGGTCTAGTATCCTGGTTAGGATTCCCCGTAATGGCTTCCATACCCATGTGCATTCCTTTATAAGATTATGTAGTGCAAAAGTCTTCCATTCTAAGGGCAGATTCAATACTGCAAGTTGCTGTAATAGGTGTTGCTGTGAGTCGGCATTCCCTAGATTCAGTTGTGTCAGGATATTAATTCTCTGGTTAGGTGTTATAGTAATAGAAAATACCTCCCTAGGTCAGCCTATCTTACAGTTTATTAAGAATATCAGAAATTTTTGAAGTTTTTTTTACCCCTCCAATGTTTTGGACCTTTGGTTATCATCTTCAGTTTATATCTCCTTTGTGATGACAAGTTGGACGTTCATGATATCATTTGAACGGCAGTGCTAAGTTTCCATGTGAATTGGTACTAGCTGACACTGACTGGTTGAAATTTACGAATTTTATCAAATTGGCCTTTAAGAGTAGAGAAGTTTACGCATCTTGCTTTTCTTTTGAGTTAATATCATTAGGTTTTGAGTTTTATAACTATAAACTAGTTTGGATTTTTTAGGTTTTTGTTCCTTTTTCTTTTTGCTGACTGTAATAATGTAGGATTAATGGCCAACTCTCAATCTATGGAAAATTTGCATGTATATCTTTTGCCTTTTCTTTTTCAGAGACAGATCAAGAGTCTGAGCACAGCTAGCTATTATACGATCATTTACGATTGAGGTTTGGTCTCTTTGTATGATGGCAGCACATCTCATCTCATGACATCACTTATAATTACTCATCATGGAAATGACTACTACAATTTTTAGACGCCTAGTTTTTCTATAACCTGCCAGAATACTTTGATTACAGTGGTCATGTGTTGAATGTTATTTAGAACTGCCGTTCAAAATGTCATCATGAGATAATAGATCCAACTTGTGTGAGATTAAATTGAAGAGATAAATCTCGGAGGGGGAATAAATTTTCATATCCCGTTGGTAAGTGGTCGTGTGAGAGAAGCTGAATTCTCTCTTCTACGTAGGAGTTTCTGATATTCCTTTTTGGTAATATAGGATAGGCTGTCTTCGGAGGTATTTGTTCGCTCTCTTAGAGGGTCTCTGCATGTATTGAGGCCTGTAGTCGAGAATGGATTGTACTCCACAAATAGGTTTCCCTTTAAGTTTTTGTTGTTTCTTTCTTCCTTTCCTTTATCTTTCTTTTCATAGTTGGTTAGCAGCTACATGTATTTAGTTTCTTTTGGATTTTGGGTTGGATGTAATGGTATGGAAGGACCGCAACATTTATAATGAGGGAATCAATATTTTGATCAAAATTTCTCGTGATATACCATTTTTTT

mRNA sequence

AACCCGTGCCCAAATCCTTTCACGCTGCAATTCTCCTCTGTAGCGTTCGTTGTTCGCAAGCTCTCTCCGATTAGGTTTTAGGTCTCAAATCTCAAATCTGCTCCTCCAATGGCGACGGTAGCATCTGCAGGACTCAATGACATCAGCAATAGCAAGAATCCGCTTGGAGAAAACCCTAGTCAAACCCTAGACCCGACGATTTCTTCCTCCGCTCAGCCTCCTGCCACCGTTCCGCCGTCGTCAACTGATGGTGGGGCTTCCAAGGAAAGGGATGAATCAAAGGGCTCCGCTAAGGCGTCGGTTGAAGGGGACGGTGCACCGGTTTCTGATATCCAGAGGAAAATGCGCCGTGCCGAGCGTTTTGGCATTTCAGTGCAATTGTCTGAAGAAGAAAAGCGCAATTCTCGAGCGGAACGGTTTGGTATGGGTACCACAACAAATGGATTGGGAGCATCAAATAAGTCAGAGGAGGTGAAGAGAAAGGCCAGAGCTGAGAGATTTGGGCTTTCTGCATCTGTGACTACTGATGATGAGGCAAAGAAGAAAGCTCGTCTTGCTAGGTTTTCATCAACATCAAAGCCAGATCCCCAGGAGGAAGAAAAGAGGAAAGCAAGGGCAATCAGGTTTTCTAATCCAACTTCGAACTCTCTCACACAAGTGGATGGGAAGGGAAATGCTGAGACGATTGCAGATATTGCTGGCAAGGCTGGAGGTGGTGCCTGAAAAGATCCTTCCCTTCTGATGGTCTAGTATCCTGGTTAGGATTCCCCGTAATGGCTTCCATACCCATGTGCATTCCTTTATAAGATTATGTAGTGCAAAAGTCTTCCATTCTAAGGGCAGATTCAATACTGCAAGTTGCTGTAATAGGTGTTGCTGTGAGTCGGCATTCCCTAGATTCAGTTGTGTCAGGATATTAATTCTCTGGTTAGGTGTTATAGTAATAGAAAATACCTCCCTAGGTCAGCCTATCTTACAGTTTATTAAGAATATCAGAAATTTTTGAAGTTTTTTTTACCCCTCCAATGTTTTGGACCTTTGGTTATCATCTTCAGTTTATATCTCCTTTGTGATGACAAGTTGGACGTTCATGATATCATTTGAACGGCAGTGCTAAGTTTCCATGTGAATTGGTACTAGCTGACACTGACTGGTTGAAATTTACGAATTTTATCAAATTGGCCTTTAAGAGTAGAGAAGTTTACGCATCTTGCTTTTCTTTTGAGTTAATATCATTAGGTTTTGAGTTTTATAACTATAAACTAGTTTGGATTTTTTAGGTTTTTGTTCCTTTTTCTTTTTGCTGACTGTAATAATGTAGGATTAATGGCCAACTCTCAATCTATGGAAAATTTGCATGTATATCTTTTGCCTTTTCTTTTTCAGAGACAGATCAAGAGTCTGAGCACAGCTAGCTATTATACGATCATTTACGATTGAGGTTTGGTCTCTTTGTATGATGGCAGCACATCTCATCTCATGACATCACTTATAATTACTCATCATGGAAATGACTACTACAATTTTTAGACGCCTAGTTTTTCTATAACCTGCCAGAATACTTTGATTACAGTGGTCATGTGTTGAATGTTATTTAGAACTGCCGTTCAAAATGTCATCATGAGATAATAGATCCAACTTGTGTGAGATTAAATTGAAGAGATAAATCTCGGAGGGGGAATAAATTTTCATATCCCGTTGGTAAGTGGTCGTGTGAGAGAAGCTGAATTCTCTCTTCTACGTAGGAGTTTCTGATATTCCTTTTTGGTAATATAGGATAGGCTGTCTTCGGAGGTATTTGTTCGCTCTCTTAGAGGGTCTCTGCATGTATTGAGGCCTGTAGTCGAGAATGGATTGTACTCCACAAATAGGTTTCCCTTTAAGTTTTTGTTGTTTCTTTCTTCCTTTCCTTTATCTTTCTTTTCATAGTTGGTTAGCAGCTACATGTATTTAGTTTCTTTTGGATTTTGGGTTGGATGTAATGGTATGGAAGGACCGCAACATTTATAATGAGGGAATCAATATTTTGATCAAAATTTCTCGTGATATACCATTTTTTT

Coding sequence (CDS)

ATGGCGACGGTAGCATCTGCAGGACTCAATGACATCAGCAATAGCAAGAATCCGCTTGGAGAAAACCCTAGTCAAACCCTAGACCCGACGATTTCTTCCTCCGCTCAGCCTCCTGCCACCGTTCCGCCGTCGTCAACTGATGGTGGGGCTTCCAAGGAAAGGGATGAATCAAAGGGCTCCGCTAAGGCGTCGGTTGAAGGGGACGGTGCACCGGTTTCTGATATCCAGAGGAAAATGCGCCGTGCCGAGCGTTTTGGCATTTCAGTGCAATTGTCTGAAGAAGAAAAGCGCAATTCTCGAGCGGAACGGTTTGGTATGGGTACCACAACAAATGGATTGGGAGCATCAAATAAGTCAGAGGAGGTGAAGAGAAAGGCCAGAGCTGAGAGATTTGGGCTTTCTGCATCTGTGACTACTGATGATGAGGCAAAGAAGAAAGCTCGTCTTGCTAGGTTTTCATCAACATCAAAGCCAGATCCCCAGGAGGAAGAAAAGAGGAAAGCAAGGGCAATCAGGTTTTCTAATCCAACTTCGAACTCTCTCACACAAGTGGATGGGAAGGGAAATGCTGAGACGATTGCAGATATTGCTGGCAAGGCTGGAGGTGGTGCCTGA

Protein sequence

MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPATVPPSSTDGGASKERDESKGSAKASVEGDGAPVSDIQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSEEVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNSLTQVDGKGNAETIADIAGKAGGGA

Homology

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BLAST of Lcy04g010620 vs. ExPASy Swiss-Prot
Match: Q9LZ08 (Protein MODIFIER OF SNC1 11 OS=Arabidopsis thaliana OX=3702 GN=MOS11 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.3e-27
Identity = 88/170 (51.76%), Postives = 112/170 (65.88%), Query Frame = 0


Query: 20  GENPSQTLDPTISSSAQPPATVP---PSSTDGGASKERDESKG-SAKASVE-GDGAPVSD 79
           GENP + +D   +   +    +       +D G  KE  +S G  + A V+ GD +PV D
Sbjct: 21  GENPKKIVDLNTTELDRTDDILDGEVKGFSDSGEKKEETDSNGIGSTAGVDSGDISPVDD 80

Query: 80  IQRKMRRAERFGISVQLSEEEKRNSRAERFG--MGTTTNGLGASNKSEEVKRKARAERFG 139
           IQ+K+RRAERFG+SV+L+EEEKRNSRAERFG       NG   + K+EE+KRKARA+RFG
Sbjct: 81  IQKKIRRAERFGVSVKLTEEEKRNSRAERFGTVAAAVVNGSEGTKKAEELKRKARADRFG 140

Query: 140 L-SASVTTD---DEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTS 179
           + SA+ TTD   +EAKKKARLARF   +K D  EE KRKARA+RFS   S
Sbjct: 141 VPSATSTTDKTEEEAKKKARLARFGKETKVDSAEENKRKARALRFSKEAS 190

[Close]

BLAST of Lcy04g010620 vs. ExPASy Swiss-Prot
Match: P82979 (SAP domain-containing ribonucleoprotein OS=Homo sapiens OX=9606 GN=SARNP PE=1 SV=3)

HSP 1 Score: 46.2 bits (108), Expect = 5.1e-04
Identity = 45/114 (39.47%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 72  VSDIQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTT-TNGLGASNKS--EEVKRKARA 131
           +   +R  +RAERF + V L  E K+ +RA RFG+ +  T GL + NK      K K RA
Sbjct: 97  IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 156

Query: 132 ERFGL---SASVTTDDEAKKKARLARF------SSTSKPDPQEEEKRKARAIRF 174
           +RFGL   S S  ++D+ K K R  RF      + T   +  E +KRK RA RF
Sbjct: 157 QRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207

[Close]

BLAST of Lcy04g010620 vs. ExPASy Swiss-Prot
Match: Q5R4V4 (SAP domain-containing ribonucleoprotein OS=Pongo abelii OX=9601 GN=SARNP PE=2 SV=3)

HSP 1 Score: 46.2 bits (108), Expect = 5.1e-04
Identity = 45/114 (39.47%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 72  VSDIQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTT-TNGLGASNKS--EEVKRKARA 131
           +   +R  +RAERF + V L  E K+ +RA RFG+ +  T GL + NK      K K RA
Sbjct: 97  IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 156

Query: 132 ERFGL---SASVTTDDEAKKKARLARF------SSTSKPDPQEEEKRKARAIRF 174
           +RFGL   S S  ++D+ K K R  RF      + T   +  E +KRK RA RF
Sbjct: 157 QRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207

[Close]

BLAST of Lcy04g010620 vs. ExPASy TrEMBL
Match: A0A6J1GD78 (protein MODIFIER OF SNC1 11-like OS=Cucurbita moschata OX=3662 GN=LOC111453127 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.3e-90
Identity = 189/204 (92.65%), Postives = 193/204 (94.61%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPATVPPSSTDGGASKERDESKGS 60
           MATVASAG+NDISNSKNPLGENPSQTLDPTISSSAQPP +VP SSTDGG+SKE DESKGS
Sbjct: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60

Query: 61  AKASVEGDGAPVSDIQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            K SVEGDG PVSD+QRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNAETIADIAGKAGGGA 205
           LTQVDGKGN ETIADIAGKAGGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of Lcy04g010620 vs. ExPASy TrEMBL
Match: A0A6J1IR28 (protein MODIFIER OF SNC1 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477977 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.4e-89
Identity = 188/204 (92.16%), Postives = 192/204 (94.12%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPATVPPSSTDGGASKERDESKGS 60
           MATVASAG+NDISNSKN LGENPSQTLDPTISSSAQPP +VP SSTDGG+SKE DESKGS
Sbjct: 1   MATVASAGINDISNSKNSLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEMDESKGS 60

Query: 61  AKASVEGDGAPVSDIQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            K SVEGDG PVSD+QRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNAETIADIAGKAGGGA 205
           LTQVDGKGN ETIADIAGKAGGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of Lcy04g010620 vs. ExPASy TrEMBL
Match: A0A0A0L0R4 (Tho1_MOS11_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G293070 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.4e-89
Identity = 186/204 (91.18%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPATVPPSSTDGGASKERDESKGS 60
           MATVA AGLNDISNSKNPLGENPSQTL+ TISSSAQPPA+VPPSSTDGG+SKE DESK +
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60

Query: 61  AKASVEGDGAPVSDIQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            K S E DGAPVSD+QRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNK+E
Sbjct: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNAETIADIAGKAGGGA 205
           LTQVDGKGN ETIAD+AGK+GGGA
Sbjct: 181 LTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of Lcy04g010620 vs. ExPASy TrEMBL
Match: A0A5A7TZD8 (Protein MODIFIER OF SNC1 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001340 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.5e-88
Identity = 185/204 (90.69%), Postives = 193/204 (94.61%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPATVPPSSTDGGASKERDESKGS 60
           MATVA AGLNDISNSKNPLGENPSQTL+PTISSSAQ PA+VPPSSTDGG+SKE DESK S
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLEPTISSSAQTPASVPPSSTDGGSSKEGDESKCS 60

Query: 61  AKASVEGDGAPVSDIQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            K S   DGAPVSD+QRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNK+E
Sbjct: 61  GKPSAGDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNAETIADIAGKAGGGA 205
           +TQVDGKGN ETIAD+AGK+GGGA
Sbjct: 181 VTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of Lcy04g010620 vs. ExPASy TrEMBL
Match: A0A1S3BHQ8 (protein MODIFIER OF SNC1 11-like OS=Cucumis melo OX=3656 GN=LOC103489757 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.5e-88
Identity = 185/204 (90.69%), Postives = 193/204 (94.61%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPATVPPSSTDGGASKERDESKGS 60
           MATVA AGLNDISNSKNPLGENPSQTL+PTISSSAQ PA+VPPSSTDGG+SKE DESK S
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLEPTISSSAQTPASVPPSSTDGGSSKEGDESKCS 60

Query: 61  AKASVEGDGAPVSDIQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            K S   DGAPVSD+QRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNK+E
Sbjct: 61  GKPSAGDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNAETIADIAGKAGGGA 205
           +TQVDGKGN ETIAD+AGK+GGGA
Sbjct: 181 VTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of Lcy04g010620 vs. NCBI nr
Match: XP_038882639.1 (protein MODIFIER OF SNC1 11 [Benincasa hispida])

HSP 1 Score: 348.2 bits (892), Expect = 4.8e-92
Identity = 191/204 (93.63%), Postives = 199/204 (97.55%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPATVPPSSTDGGASKERDESKGS 60
           MATVASAGLNDISNSK+PLGENPSQTLDPTISSSAQPPA+VP SSTDGG+SK+RDESKGS
Sbjct: 1   MATVASAGLNDISNSKSPLGENPSQTLDPTISSSAQPPASVPSSSTDGGSSKDRDESKGS 60

Query: 61  AKASVEGDGAPVSDIQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            KASVEGDGAPVSD+QRKMRRAERFGISVQLSEEEKRNSRAERFGMGT TNGLGASNK+E
Sbjct: 61  GKASVEGDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTATNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNAETIADIAGKAGGGA 205
            TQ+DGKGN ETIAD+AGKAGGGA
Sbjct: 181 PTQMDGKGNVETIADVAGKAGGGA 204

[Close]

BLAST of Lcy04g010620 vs. NCBI nr
Match: XP_022949856.1 (protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949857.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949858.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >KAG6603695.1 Protein MODIFIER OF SNC1 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033871.1 Protein MODIFIER OF SNC1 11 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 339.7 bits (870), Expect = 1.7e-89
Identity = 189/204 (92.65%), Postives = 193/204 (94.61%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPATVPPSSTDGGASKERDESKGS 60
           MATVASAG+NDISNSKNPLGENPSQTLDPTISSSAQPP +VP SSTDGG+SKE DESKGS
Sbjct: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60

Query: 61  AKASVEGDGAPVSDIQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            K SVEGDG PVSD+QRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNAETIADIAGKAGGGA 205
           LTQVDGKGN ETIADIAGKAGGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of Lcy04g010620 vs. NCBI nr
Match: XP_022977777.1 (protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977778.1 protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977779.1 protein MODIFIER OF SNC1 11-like [Cucurbita maxima])

HSP 1 Score: 337.0 bits (863), Expect = 1.1e-88
Identity = 188/204 (92.16%), Postives = 192/204 (94.12%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPATVPPSSTDGGASKERDESKGS 60
           MATVASAG+NDISNSKN LGENPSQTLDPTISSSAQPP +VP SSTDGG+SKE DESKGS
Sbjct: 1   MATVASAGINDISNSKNSLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEMDESKGS 60

Query: 61  AKASVEGDGAPVSDIQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            K SVEGDG PVSD+QRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNAETIADIAGKAGGGA 205
           LTQVDGKGN ETIADIAGKAGGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of Lcy04g010620 vs. NCBI nr
Match: XP_031740008.1 (protein MODIFIER OF SNC1 11 [Cucumis sativus] >KGN54197.1 hypothetical protein Csa_017918 [Cucumis sativus])

HSP 1 Score: 337.0 bits (863), Expect = 1.1e-88
Identity = 186/204 (91.18%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPATVPPSSTDGGASKERDESKGS 60
           MATVA AGLNDISNSKNPLGENPSQTL+ TISSSAQPPA+VPPSSTDGG+SKE DESK +
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60

Query: 61  AKASVEGDGAPVSDIQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            K S E DGAPVSD+QRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNK+E
Sbjct: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNAETIADIAGKAGGGA 205
           LTQVDGKGN ETIAD+AGK+GGGA
Sbjct: 181 LTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of Lcy04g010620 vs. NCBI nr
Match: XP_008447291.1 (PREDICTED: protein MODIFIER OF SNC1 11-like [Cucumis melo] >KAA0047316.1 protein MODIFIER OF SNC1 11-like [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 7.2e-88
Identity = 185/204 (90.69%), Postives = 193/204 (94.61%), Query Frame = 0


Query: 1   MATVASAGLNDISNSKNPLGENPSQTLDPTISSSAQPPATVPPSSTDGGASKERDESKGS 60
           MATVA AGLNDISNSKNPLGENPSQTL+PTISSSAQ PA+VPPSSTDGG+SKE DESK S
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLEPTISSSAQTPASVPPSSTDGGSSKEGDESKCS 60

Query: 61  AKASVEGDGAPVSDIQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            K S   DGAPVSD+QRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNK+E
Sbjct: 61  GKPSAGDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNAETIADIAGKAGGGA 205
           +TQVDGKGN ETIAD+AGK+GGGA
Sbjct: 181 VTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of Lcy04g010620 vs. TAIR 10
Match: AT5G02770.1 (unknown protein; Has 469 Blast hits to 336 proteins in 126 species: Archae - 0; Bacteria - 54; Metazoa - 249; Fungi - 22; Plants - 47; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). )

HSP 1 Score: 122.1 bits (305), Expect = 5.2e-28
Identity = 88/170 (51.76%), Postives = 112/170 (65.88%), Query Frame = 0


Query: 20  GENPSQTLDPTISSSAQPPATVP---PSSTDGGASKERDESKG-SAKASVE-GDGAPVSD 79
           GENP + +D   +   +    +       +D G  KE  +S G  + A V+ GD +PV D
Sbjct: 21  GENPKKIVDLNTTELDRTDDILDGEVKGFSDSGEKKEETDSNGIGSTAGVDSGDISPVDD 80

Query: 80  IQRKMRRAERFGISVQLSEEEKRNSRAERFG--MGTTTNGLGASNKSEEVKRKARAERFG 139
           IQ+K+RRAERFG+SV+L+EEEKRNSRAERFG       NG   + K+EE+KRKARA+RFG
Sbjct: 81  IQKKIRRAERFGVSVKLTEEEKRNSRAERFGTVAAAVVNGSEGTKKAEELKRKARADRFG 140

Query: 140 L-SASVTTD---DEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTS 179
           + SA+ TTD   +EAKKKARLARF   +K D  EE KRKARA+RFS   S
Sbjct: 141 VPSATSTTDKTEEEAKKKARLARFGKETKVDSAEENKRKARALRFSKEAS 190

The following BLAST results are available for this feature:

BLAST of Lcy04g010620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ08	7.3e-27	51.76	Protein MODIFIER OF SNC1 11 OS=Arabidopsis thaliana OX=3702 GN=MOS11 PE=1 SV=1	[more]
P82979	5.1e-04	39.47	SAP domain-containing ribonucleoprotein OS=Homo sapiens OX=9606 GN=SARNP PE=1 SV...	[more]
Q5R4V4	5.1e-04	39.47	SAP domain-containing ribonucleoprotein OS=Pongo abelii OX=9601 GN=SARNP PE=2 SV...	[more]

BLAST of Lcy04g010620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GD78	8.3e-90	92.65	protein MODIFIER OF SNC1 11-like OS=Cucurbita moschata OX=3662 GN=LOC111453127 P...	[more]
A0A6J1IR28	5.4e-89	92.16	protein MODIFIER OF SNC1 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477977 PE=...	[more]
A0A0A0L0R4	5.4e-89	91.18	Tho1_MOS11_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G29307...	[more]
A0A5A7TZD8	3.5e-88	90.69	Protein MODIFIER OF SNC1 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3BHQ8	3.5e-88	90.69	protein MODIFIER OF SNC1 11-like OS=Cucumis melo OX=3656 GN=LOC103489757 PE=4 SV...	[more]

BLAST of Lcy04g010620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882639.1	4.8e-92	93.63	protein MODIFIER OF SNC1 11 [Benincasa hispida]	[more]
XP_022949856.1	1.7e-89	92.65	protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949857.1 protein MO...	[more]
XP_022977777.1	1.1e-88	92.16	protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977778.1 protein MODI...	[more]
XP_031740008.1	1.1e-88	91.18	protein MODIFIER OF SNC1 11 [Cucumis sativus] >KGN54197.1 hypothetical protein C...	[more]
XP_008447291.1	7.2e-88	90.69	PREDICTED: protein MODIFIER OF SNC1 11-like [Cucumis melo] >KAA0047316.1 protein...	[more]

BLAST of Lcy04g010620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02770.1	5.2e-28	51.76	unknown protein; Has 469 Blast hits to 336 proteins in 126 species: Archae - 0; ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040746	THO1_MOS11, C-terminal domain	PFAM	PF18592	Tho1_MOS11_C	coord: 73..105 e-value: 1.4E-11 score: 44.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 6..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..171
IPR044209	Protein MODIFIER OF SNC1 11	PANTHER	PTHR47701	PROTEIN MODIFIER OF SNC1 11	coord: 16..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g010620.1	Lcy04g010620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016973	poly(A)+ mRNA export from nucleus
cellular_component	GO:0005634	nucleus