Homology
BLAST of Lcy04g009390 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 149.1 bits (375), Expect = 2.2e-34
Identity = 152/648 (23.46%), Postives = 258/648 (39.81%), Query Frame = 0
Query: 181 LPAQSGRKKVDLFKSLRERVWKVLQGWKGCLFSLGGKEILIKAIAQAIPLYTMSCFKLPI 240
+P R D F + ERV + GW+ S G+ L KA+ ++P+++MS LP
Sbjct: 1 MPVLQKRINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQ 60
Query: 241 SVCDEINRLCACFWWGSTSSKKKVHWLSWRKMCRSKGSGGMGFRDLHDFNQVMLAKVSWR 300
S+ + +++L F WGST+ KKK H + W K+C K GG+G R N+ +++KV WR
Sbjct: 61 SILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWR 120
Query: 301 VIKNPDSLMAKVLRGRY----FQDGDFLRAKIGNNPSLTWRSIVWG-RSLFIKGMRWKIG 360
+++ +SL VL+ +Y +D +L K + S TWRSI G R + G+ W G
Sbjct: 121 LLQEKNSLWTLVLQKKYHVGEIRDSRWLIPK--GSWSSTWRSIAIGLRDVVSHGVGWIPG 180
Query: 361 SDEDPWLVKGGNKIPLTVRADFKGKKLNVILNNEGDWKVDLV------------------ 420
G +I GK L + N E D V
Sbjct: 181 D---------GQQIRFWTDRWVSGKPLLELDNGERPTDCDTVVAKDLWIPGRGWDFAKID 240
Query: 421 ---RKAFEVEEATTIINIPRGKSSAPDSIIWDKEPKGVFTVRSAYHLATRLSRKDEATGA 480
+E ++++ G A D + W G F+VRSAY + T DE
Sbjct: 241 PYTTNNTRLELRAVVLDLVTG---ARDRLSWKFSQDGQFSVRSAYEMLT----VDE---V 300
Query: 481 EDSNSKKLWNAIWNLKCIPRAKILVWKIITNALPTKVNLMHKGINSNNGSLFCRSKAEST 540
N +N +W ++ R K +W + A+ T+ + ++++N C+ ES
Sbjct: 301 PRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESM 360
Query: 541 EHTFWECKFARKIWVWCLP--NSCNFLNVRRGRWEPIDYWERMIQGLSTAELNNA-ALTL 600
H +C IWV +P F + W + +R G + A+ +
Sbjct: 361 LHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEWLYDNLGDR--SGCEDIPWSTIFAVII 420
Query: 601 WFIWNYRNQCLHNDQQIDIQELKRKISIILEEFAENSEKKQNLDRLESSSSHARWRPPDN 660
W+ W +R + + +K +E + +S W P
Sbjct: 421 WWGWKWRCGNIFGENTKCRDRVKFVKEWAVEVYRAHSGNVLVGITQPRVERMIGWVSPCV 480
Query: 661 QHWKLNSDASWCEKERAGGLGWSIRDSNGSLIGAGCKRVFQKGSIKWLEAKALLEGL-KA 720
K+N+D + G +RD G+ G F + +A L G+
Sbjct: 481 GWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGG-----FSLNIGRCSAPQAELWGVYYG 540
Query: 721 LVSQMEERIPIPFLPLTVETDAGEVVKILNHEVEDLSEISMVI----DDIEDTALLANVT 780
L E+++P + +E D+ +V L + D +S ++ ++ L+ V
Sbjct: 541 LYFAWEKKVP----RVELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFLQKDWLVRIVH 600
Query: 781 SYSKCSRLENQEAHLLARAAVGSGNFSYFCGRSLYPVLGESVLRRDVV 795
Y + +RL + A+ ++G +F L P S+LR D +
Sbjct: 601 VYREANRLADGLANYAFSLSLGFHSF------DLVPDAMSSLLREDTL 610
BLAST of Lcy04g009390 vs. ExPASy Swiss-Prot
Match:
P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)
HSP 1 Score: 135.6 bits (340), Expect = 2.6e-30
Identity = 57/130 (43.85%), Postives = 85/130 (65.38%), Query Frame = 0
Query: 227 AIPLYTMSCFKLPISVCDEINRLCACFWWGSTSSKKKVHWLSWRKMCRSK-GSGGMGFRD 286
A+P+Y MSCF+L +C ++ FWW S +K+K+ W++W+K+C+SK GG+GFRD
Sbjct: 2 ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61
Query: 287 LHDFNQVMLAKVSWRVIKNPDSLMAKVLRGRYFQDGDFLRAKIGNNPSLTWRSIVWGRSL 346
L FNQ +LAK S+R+I P +L++++LR RYF + +G PS WRSI+ GR L
Sbjct: 62 LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121
Query: 347 FIKGMRWKIG 356
+G+ IG
Sbjct: 122 LSRGLLRTIG 131
BLAST of Lcy04g009390 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 97.8 bits (242), Expect = 5.9e-19
Identity = 75/304 (24.67%), Postives = 142/304 (46.71%), Query Frame = 0
Query: 1 MKLDMSKAYDRVEWAFLRQAMGKMGFSGCWIDRIMRCIESVQFSVLINGVPQEVFRPRRG 60
+ LD KA+D+++ F+ + + + G G +++ I ++ +NG E + G
Sbjct: 604 ISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVANIKVNGEKLEAIPLKSG 663
Query: 61 LRQGDPLSPYLFLICSEGLSTLLKREESQNHISGIRINYHCPTLTHLFFADDSLIFFKAT 120
RQG PLSPYLF I E L+ +++ Q I GI+I ++ L ADD +++
Sbjct: 664 TRQGCPLSPYLFNIVLEVLARAIRQ---QKEIKGIQIGKEEVKISLL--ADDMIVYISDP 723
Query: 121 VEEGERIKEVLHIYEKATGQKINLDKS-ACVVSKNVAMPKALEISKRLGINLTDSLGHYL 180
+ +++ + + G KIN +KS A + +KN K EI + ++ + YL
Sbjct: 724 KNSTRELLNLINSFGEVVGYKINSNKSMAFLYTKNKQAEK--EIRETTPFSIVTNNIKYL 783
Query: 181 GLPAQSGRKKV--DLFKSLRERVWKVLQGWKGCLFSLGGKEILIK--AIAQAIPLYTMSC 240
G+ K + FKSL++ + + L+ WK S G+ ++K + +AI +
Sbjct: 784 GVTLTKEVKDLYDKNFKSLKKEIKEDLRRWKDLPCSWIGRINIVKMAILPKAIYRFNAIP 843
Query: 241 FKLPISVCDEINRLCACFWWGSTSSKKKVHWLSWRKMCRSKGSGGMGFRDLHDFNQVMLA 300
K+P +E+ F W + + ++ + + SGG+ DL + + ++
Sbjct: 844 IKIPTQFFNELEGAICKFVWNNKKPR-----IAKSLLKDKRTSGGITMPDLKLYYRAIVI 895
BLAST of Lcy04g009390 vs. ExPASy Swiss-Prot
Match:
P92555 (Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1)
HSP 1 Score: 89.0 bits (219), Expect = 2.7e-16
Identity = 37/68 (54.41%), Postives = 50/68 (73.53%), Query Frame = 0
Query: 46 LINGVPQEVFRPRRGLRQGDPLSPYLFLICSEGLSTLLKREESQNHISGIRINYHCPTLT 105
+ING PQ + P RGLRQGDPLSPYLF++C+E LS L +R + Q + GIR++ + P +
Sbjct: 13 IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72
Query: 106 HLFFADDS 114
HL FADD+
Sbjct: 73 HLLFADDT 80
BLAST of Lcy04g009390 vs. ExPASy Swiss-Prot
Match:
Q05118 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1)
HSP 1 Score: 61.2 bits (147), Expect = 6.1e-08
Identity = 44/156 (28.21%), Postives = 69/156 (44.23%), Query Frame = 0
Query: 1 MKLDMSKAYDRVEWAFLRQAMGKMGFSGCWIDRIMRCIESVQFSVLINGVPQEVFRPRRG 60
+ LD+ KA+D V + +AM G D IM I ++++ G R G
Sbjct: 26 VSLDIRKAFDTVSHPAILRAMRAFGIDDGMQDFIMSTITDAYTNIVVGGRTTNKIYIRNG 85
Query: 61 LRQGDPLSPYLFLICSEGLSTLLKREESQNHISGIRINYHCPTLTHLFFADDSLIFFKAT 120
++QGDPLSP LF I + L T L E+ G + C + L FADD L+
Sbjct: 86 VKQGDPLSPVLFNIVLDELVTRLNDEQ-----PGASMTPAC-KIASLAFADDLLLLEDRD 145
Query: 121 VEEGERIKEVLHIYEKATGQKINLDKSACVVSKNVA 157
++ + Y + G +N +K A + + V+
Sbjct: 146 IDVPNSLATTC-AYFRTRGMTLNPEKCASISAATVS 174
BLAST of Lcy04g009390 vs. ExPASy TrEMBL
Match:
A0A803QEG9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 542.0 bits (1395), Expect = 4.4e-150
Identity = 292/799 (36.55%), Postives = 435/799 (54.44%), Query Frame = 0
Query: 1 MKLDMSKAYDRVEWAFLRQAMGKMGFSGCWIDRIMRCIESVQFSVLINGVPQEVFRPRRG 60
+KLDMSKA+DRVEW F+ + M KMGF+ WI IM C+ + +FS L+NG P RG
Sbjct: 1083 LKLDMSKAFDRVEWTFIEEVMKKMGFASGWITLIMSCLTTNKFSFLVNGEVTGSLIPTRG 1142
Query: 61 LRQGDPLSPYLFLICSEGLSTLLKREESQNHISGIRINYHCPTLTHLFFADDSLIFFKAT 120
LRQG PLSPYLFLIC+EGLS LL+ E+ Q ++ G ++ P ++HL FADDSL+F +A
Sbjct: 1143 LRQGCPLSPYLFLICAEGLSRLLQHEQDQGNLHGFKLTRRAPMISHLLFADDSLLFCQAD 1202
Query: 121 VEEGERIKEVLHIYEKATGQKINLDKSACVVSKNVAMPKALEISKRLGINLTDSLGHYLG 180
IK VL Y KA+GQ IN DKS S N + + + L + +++ YLG
Sbjct: 1203 ESSCLAIKRVLDTYHKASGQFINRDKSVMSFSPNTTLAAQIFFHRHLSMPISECHEKYLG 1262
Query: 181 LPAQSGRKKVDLFKSLRERVWKVLQGWKGCLFSLGGKEILIKAIAQAIPLYTMSCFKLPI 240
LP+ SGR K +LF +++ER+WK++Q W LFS GG+E+L+KA+ Q+IP Y MSCF+LP+
Sbjct: 1263 LPSYSGRDKRELFSNIKERIWKLMQSWSEKLFSAGGREVLLKAVVQSIPTYAMSCFRLPV 1322
Query: 241 SVCDEINRLCACFWWGSTSSKKKVHWLSWRKMCRSKGSGGMGFRDLHDFNQVMLAKVSWR 300
C+++ + A FWWG + K+HW SW +C++KG GGMGFR FNQ +LAK +WR
Sbjct: 1323 YFCNQLESMMANFWWGLNENGSKIHWRSWNLLCKTKGEGGMGFRSFIQFNQALLAKQAWR 1382
Query: 301 VIKNPDSLMAKVLRGRYFQDGDFLRAKIGNNPSLTWRSIVWGRSLFIKGMRWKIG----- 360
+++ P+SL++ +L+ +YF FL A +G++PSLTW+ I WGR L G+RWKIG
Sbjct: 1383 IVEYPNSLLSTLLKSKYFPHNSFLEASMGHSPSLTWQGIRWGRELLAHGLRWKIGEGRTV 1442
Query: 361 -SDEDPWLVKGGNKIPLTVRADFKGKKLNVILNNEGDWKVDLVRKAFEVEEATTIINIPR 420
S DPWL + +P+T G N+I +E W + L+++ F + I+ +P
Sbjct: 1443 RSGFDPWLPGHSSFLPITYSGPPNGVVANLI-TDERQWNIPLLQQYFCPLDIEKILTLPL 1502
Query: 421 GKSSAPDSIIWDKEPKGVFTVRSAYHLATRLSRKDEATGAEDSNSKKLWNAIWNLKCIPR 480
D +IW G FTV+SAYHLAT L +D + +++ + W W+L+ +
Sbjct: 1503 SFFPTRDKLIWHHHSSGNFTVQSAYHLATSLENED--LSSSSTSAVQWWKHFWSLQIPQK 1562
Query: 481 AKILVWKIITNALPTKVNLMHKGINSNNGSLFCRSKAESTEHTFWECKFARKIWVWCLPN 540
KI W++I +ALP +L+ + I +++ C+ EST H + CK+A+ +W
Sbjct: 1563 VKIFAWRVIHDALPVATSLVRRKIITDSTCSICKQAWESTGHALFGCKYAKAVW-----R 1622
Query: 541 SCNF-------LNVRRGRWEPIDYWERMIQGLSTAELNNAALTLWFIWNYRNQCLHNDQQ 600
S +F ++++ G DY + + AE+ +W IW RN+ +H
Sbjct: 1623 SFHFNFNWSAAISMKNG-----DYLMYLSSIYNKAEMEELFCIMWAIWGERNKVVHGKNA 1682
Query: 601 IDIQELKRKISIILEEFAENSEK-----------------KQNLDRLESSSSHARWRPPD 660
+L ++ L+ F K +Q ++++ + WRPP
Sbjct: 1683 RRANDLAVFATVFLQNFRAAQHKPVAAATAPAATDVAGPSQQPSKPPAATAALSSWRPPA 1742
Query: 661 NQHWKLNSDASWCEKERAGGLGWSIRDSNGSLIGAGCKRVFQKGSIKWLEAKALLEGLKA 720
+KLN+DA+ G+G +RD++GS+ GA + +EAKAL L
Sbjct: 1743 ADCYKLNTDAAAENSSNTIGVGAVLRDASGSVTGALAMPIIGNFKSHEMEAKALFHSLNW 1802
Query: 721 LVSQMEERIPIPFLPLT-VETDAGEVVKILNHEVEDLSEISMVIDDIEDTALLANVTSYS 769
+ Q LP+T +ETDA VV L SE S +I D+ S S
Sbjct: 1803 ALQQQ--------LPITHIETDALMVVNALKAPFNSNSEFSDLISDVHSLLSFFPNVSVS 1860
BLAST of Lcy04g009390 vs. ExPASy TrEMBL
Match:
A0A803PQ30 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 537.3 bits (1383), Expect = 1.1e-148
Identity = 293/804 (36.44%), Postives = 430/804 (53.48%), Query Frame = 0
Query: 2 KLDMSKAYDRVEWAFLRQAMGKMGFSGCWIDRIMRCIESVQFSVLINGVPQEVFRPRRGL 61
KL + A+DRVEW F+ + M KMGF+ WI IM C+ + FS LING P RGL
Sbjct: 1019 KLALPLAFDRVEWRFIEEVMRKMGFAERWISLIMSCLTTNSFSFLINGEVMGNLTPSRGL 1078
Query: 62 RQGDPLSPYLFLICSEGLSTLLKREESQNHISGIRINYHCPTLTHLFFADDSLIFFKATV 121
RQG PLSPYLFLICSEG S LL+ ++ ++ G ++ H P +THLFFADDSL+F +AT
Sbjct: 1079 RQGCPLSPYLFLICSEGFSRLLQHQQEIGNLMGFKLTRHAPPITHLFFADDSLLFCQATE 1138
Query: 122 EEGERIKEVLHIYEKATGQKINLDKSACVVSKNVAMPKALEISKRLGINLTDSLGHYLGL 181
IK VL Y KA+GQ++NL KS S N + + ++L + + + YLGL
Sbjct: 1139 RSCLAIKSVLETYHKASGQELNLSKSVMSFSPNTTLAAQVFFHQQLAMPICECHEKYLGL 1198
Query: 182 PAQSGRKKVDLFKSLRERVWKVLQGWKGCLFSLGGKEILIKAIAQAIPLYTMSCFKLPIS 241
P+ SGR K ++F ++E++WK++ W F GGKE+L+KA+ Q+IP Y MSCF+LP+
Sbjct: 1199 PSYSGRDKKEMFSHIKEKIWKLMNTWHEKFFLAGGKEVLLKAVVQSIPTYAMSCFRLPVY 1258
Query: 242 VCDEINRLCACFWWGSTSSKKKVHWLSWRKMCRSKGSGGMGFRDLHDFNQVMLAKVSWRV 301
C ++ + FWWG T + K+HW SW +C+SK GGMGFR FNQ +LAK +WR+
Sbjct: 1259 FCKQVESMMVNFWWGLTENGSKIHWRSWNLLCKSKSEGGMGFRSFIHFNQALLAKQAWRI 1318
Query: 302 IKNPDSLMAKVLRGRYFQDGDFLRAKIGNNPSLTWRSIVWGRSLFIKGMRWKIG------ 361
NPDSL+++VL+ RYF + FL A +G++PSLTW+ I W R L +KG+RWK+G
Sbjct: 1319 YDNPDSLLSRVLKSRYFPNNTFLEASLGHSPSLTWQGIHWARELLLKGLRWKVGDGRHIQ 1378
Query: 362 SDEDPWLVKGGNKIPLTVRADFKGKKLNVILNNEGDWKVDLVRKAFEVEEATTIINIPRG 421
SD DPW+ +P + G N+I ++E W V ++ + F + I+ IP
Sbjct: 1379 SDYDPWIPGHNTFLPFLYKGPSNGVVANLI-SDERQWNVPILHQFFSPADVDRILTIPLS 1438
Query: 422 KSSAPDSIIWDKEPKGVFTVRSAYHLATRLSRKDEATGAEDSNSKKLWNAIWNLKCIPRA 481
S D++IW G++TV S YHL + L D+++ + +S W W+L+ P+
Sbjct: 1439 YFSGRDTLIWHHHSTGLYTVSSGYHLVSDLDTMDQSSSSRVHSS--WWKFFWSLQLPPKV 1498
Query: 482 KILVWKIITNALPTKVNLMHKGINSNNGSLFCRSKAESTEHTFWECKFARKIWVWCLPNS 541
KI WK + +ALP L+ + + +++ C+ ES H + C++AR +W +S
Sbjct: 1499 KIFAWKAVHDALPIATLLVKRKVITDSTCSVCKQAWESVGHALFHCRYARAVW---RNSS 1558
Query: 542 CNFLNVRRGRWEPIDYWERMIQGLSTAELNNAALTLWFIWNYRNQCLHNDQQIDIQELKR 601
+F + DY + LS AE+ TLW IWN RN+ +H Q L
Sbjct: 1559 LSFDWRLAATMQKGDYIFHLSSILSKAEMEQLFCTLWTIWNERNRAVHGQQARPAAGLAS 1618
Query: 602 KISIILEEFAENSEKKQNLDRLESSSSHAR----------------------------WR 661
+ L + N++++ ++++H + WR
Sbjct: 1619 YAATYLSNY-RNAQQRHGTAATTAATAHQQAHQTTATAASPPRSNPRPSLQAVPATRLWR 1678
Query: 662 PPDNQHWKLNSDASWCEKERAGGLGWSIRDSNGSLIGAGCKRVFQKGSIKWLEAKALLEG 721
PPD +KLN DA+ G+G IRDSNG ++ K++ +EA AL
Sbjct: 1679 PPDFNLFKLNVDAAVDSSRGVIGVGAIIRDSNGVVVATLSKQLIGNFRSHEMEASALFHS 1738
Query: 722 LKALVSQMEERIPIPFLPLTV-ETDAGEVVKILNHEVEDLSEISMVIDDIED-TALLANV 769
L + Q LP ++ E+DA VV L +S S +I DI + L NV
Sbjct: 1739 LNWAIQQQ--------LPFSIAESDALMVVNALRAPFNSISSFSDLILDISCLLSFLPNV 1798
BLAST of Lcy04g009390 vs. ExPASy TrEMBL
Match:
A0A803QC75 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 537.0 bits (1382), Expect = 1.4e-148
Identity = 291/807 (36.06%), Postives = 442/807 (54.77%), Query Frame = 0
Query: 2 KLDMSKAYDRVEWAFLRQAMGKMGFSGCWIDRIMRCIESVQFSVLINGVPQEVFRPRRGL 61
KLDMSKA+DRVEW F+ + M KMGF+ WI IM C+ + FS +ING P RGL
Sbjct: 893 KLDMSKAFDRVEWKFIEEVMRKMGFAERWISLIMSCLTTNNFSFIINGEVMGNLTPSRGL 952
Query: 62 RQGDPLSPYLFLICSEGLSTLLKREESQNHISGIRINYHCPTLTHLFFADDSLIFFKATV 121
RQG PLSPYLFLICSEG S LL+ E+ N++ G ++ H P +THLFFADDSL+F +A
Sbjct: 953 RQGCPLSPYLFLICSEGFSRLLQHEQDSNNLMGFKLTRHAPPITHLFFADDSLLFCQANE 1012
Query: 122 EEGERIKEVLHIYEKATGQKINLDKSACVVSKNVAMPKALEISKRLGINLTDSLGHYLGL 181
IK VL Y KA+GQ++NLDKS S N + + ++L + + + YLGL
Sbjct: 1013 RSCLAIKRVLDTYHKASGQELNLDKSVMSFSPNTTLAAQVFFHQQLSMPICECHEKYLGL 1072
Query: 182 PAQSGRKKVDLFKSLRERVWKVLQGWKGCLFSLGGKEILIKAIAQAIPLYTMSCFKLPIS 241
P+ SGR K ++F +++ER+WK++ W +FS GGKEIL+KA+ Q+IP Y MSCF+LP
Sbjct: 1073 PSYSGRDKKEMFSNIKERIWKLMNSWNEKIFSAGGKEILLKAVVQSIPTYAMSCFRLPAY 1132
Query: 242 VCDEINRLCACFWWGSTSSKKKVHWLSWRKMCRSKGSGGMGFRDLHDFNQVMLAKVSWRV 301
C ++ + A FWWG T + ++HW SW +C+SK GGMGFR FNQ +LAK +WR+
Sbjct: 1133 FCKQVESMMANFWWGLTENGSRIHWRSWNLLCKSKLEGGMGFRSFIHFNQALLAKQAWRI 1192
Query: 302 IKNPDSLMAKVLRGRYFQDGDFLRAKIGNNPSLTWRSIVWGRSLFIKGMRWKIG------ 361
+ P SL+ ++L+ RYF + +FL A +G++PSLTW+ I W R L IKG+RWK+G
Sbjct: 1193 FEKPHSLLGRILKSRYFPNNNFLEASLGHSPSLTWQGIHWARELLIKGLRWKVGDGRHIQ 1252
Query: 362 SDEDPWLVKGGNKIPLTVRADFKGKKLNVILNNEGDWKVDLVRKAFEVEEATTIINIPRG 421
S DPW+ +P G N+I +E W + L+++ F + I+++P
Sbjct: 1253 SGSDPWIPGHNTFLPFHYSGPSNGVVSNLI-TDERQWDLPLLKQFFSALDVERILSVPLS 1312
Query: 422 KSSAPDSIIWDKEPKGVFTVRSAYHLATRLSRKDEATGAEDSNSKKLWNAIWNLKCIPRA 481
S+ D +IW G++TV+S YHLA + D+++ + + W W+L+ P+
Sbjct: 1313 FFSSRDVLIWHHHSSGLYTVKSGYHLAADMDIIDQSSSS--NRDSHWWKFFWSLQLPPKV 1372
Query: 482 KILVWKIITNALPTKVNLMHKGINSNNGSLFCRSKAESTEHTFWECKFARKIW------- 541
KI W+ I +ALP +L+ + + +++ C+ ES H + CK+A+ +W
Sbjct: 1373 KIFAWRAIHDALPVATSLVKRKVITDSTCSVCQQAWESVGHALFSCKYAKAVWRHSNLVF 1432
Query: 542 VWCLPNSCNFLNVRRGRWEPIDYWERMIQGLSTAELNNAALTLWFIWNYRNQCLHNDQQI 601
W L + + +G DY + S AE+ +LW IW RN+ +H +
Sbjct: 1433 DWRLSAA-----MYKG-----DYILHLSTIYSKAEMEQIFCSLWTIWTERNRIVHGHKAR 1492
Query: 602 DIQELKRKISIILEEFAENSEKKQNLDRLESSSSH------------------------- 661
++L L + N++++ L+ L + +S
Sbjct: 1493 PAKDLASYAVTYLLNY-RNAQQRVRLNDLTTCTSRPPQEILYSFFYQIASASPKPQVVPA 1552
Query: 662 -ARWRPPDNQHWKLNSDASWCEKERAGGLGWSIRDSNGSLIGAGCKRVFQKGSIKWLEAK 721
+WRPP+ +KLN DA+ ++ G+G IRDSNG+++ A K+ S +EA
Sbjct: 1553 AQQWRPPEANSYKLNVDAAIDVHQKVIGIGAIIRDSNGNVVAAYSKQQPGHFSSHEMEAI 1612
Query: 722 ALLEGLKALVSQMEERIPIPFLPLTVETDAGEVVKILNHEVEDLSEI-SMVIDDIEDTAL 769
AL + L ++ Q ++PI VE+DA VV L +S +++D + +
Sbjct: 1613 ALFQSLNWVIQQ---QLPISL----VESDALMVVNALRAPFNSISSFHDLIVDVLCLLSF 1672
BLAST of Lcy04g009390 vs. ExPASy TrEMBL
Match:
A0A2N9HW96 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44504 PE=4 SV=1)
HSP 1 Score: 527.3 bits (1357), Expect = 1.1e-145
Identity = 287/778 (36.89%), Postives = 434/778 (55.78%), Query Frame = 0
Query: 2 KLDMSKAYDRVEWAFLRQAMGKMGFSGCWIDRIMRCIESVQFSVLINGVPQEVFRPRRGL 61
KLDMSKAYDR+EW +L+ M KMGF W+D +M C+ + FS+L+NG P+ P RGL
Sbjct: 15 KLDMSKAYDRIEWNYLQAVMLKMGFDVRWVDLVMECVSTTSFSILLNGFPKGHITPSRGL 74
Query: 62 RQGDPLSPYLFLICSEGLSTLLKREESQNHISGIRINYHCPTLTHLFFADDSLIFFKATV 121
RQGDPLSPYLFLIC+EG + L++ +Q I G+ I+ P +HLFFADDS++F KA+V
Sbjct: 75 RQGDPLSPYLFLICAEGFTALIRNAMNQKLIQGMAISRGGPRFSHLFFADDSILFCKASV 134
Query: 122 EEGERIKEVLHIYEKATGQKINLDKSACVVSKNVAMPKALEISKRLGINLTDSLGHYLGL 181
EE + +K+VL +YE A+GQK+N++K++ S N + EI RLG T+ L YLGL
Sbjct: 135 EECQVLKDVLKLYEDASGQKLNMEKTSLFFSSNTSDTVKEEIQFRLGARGTNQLEKYLGL 194
Query: 182 PAQSGRKKVDLFKSLRERVWKVLQGWKGCLFSLGGKEILIKAIAQAIPLYTMSCFKLPIS 241
P GR K F+ ++ R+ + + GWK L S GKEILIKA+AQAIP Y MS F+LP S
Sbjct: 195 PPIIGRSKRKAFEDIKSRIGRKVGGWKEKLLSQAGKEILIKAVAQAIPTYAMSVFRLPGS 254
Query: 242 VCDEINRLCACFWWGSTSSKKKVHWLSWRKMCRSKGSGGMGFRDLHDFNQVMLAKVSWRV 301
+CDEIN + + +WWG ++K+HW+ W+K+ SK GGMGFRDL FN +LA+ WR+
Sbjct: 255 LCDEINSMISNYWWGQKQGERKIHWVGWKKLAISKEEGGMGFRDLRLFNSALLARQCWRI 314
Query: 302 IKNPDSLMAKVLRGRYFQDGDFLRAKIGNNPSLTWRSIVWGRSLFIKGMRWKIGSD---- 361
IKNP SL+ +VL+ +YF + FL AK+ +N S WRSI+ R + G RW++G+
Sbjct: 315 IKNPHSLLVRVLKSKYFPNSSFLDAKMPHNASFAWRSILGAREIISLGTRWRVGNGTNIR 374
Query: 362 --EDPWL-VKGGNKIPLTVRADFKGKKLN-VILNNEGDWKVDLVRKAFEVEEATTIINIP 421
+D W+ + K+ + + ++ +I + W L+ FEV EA TI +IP
Sbjct: 375 IWKDRWIPTRSTFKVQSPISILQENTTVDALIFQDTRLWNAPLIDAIFEVSEADTIKSIP 434
Query: 422 RGKSSAPDSIIWDKEPKGVFTVRSAYHLATRLSRKDEATGAEDSNSKKLWNAIWNLKCIP 481
+ S+ D+IIW + GV++VRSAYHL + + E+ + +S LW IWN
Sbjct: 435 LSRRSSTDTIIWSETKNGVYSVRSAYHLLMKAKKGGES--SNNSQVNNLWKGIWNASVPQ 494
Query: 482 RAKILVWKIITNALPTKVNLMHKGINSNNGSLFCRSKAESTEHTFWECKFARKIWVWCL- 541
+ K+ +WK N LPTK+NL K ++ C + ES H +CKFA+++W +
Sbjct: 495 KIKLFIWKACKNILPTKLNLFRKKACNSMSCDLCDNDLESVMHVLVDCKFAQEVWGLSVL 554
Query: 542 ------PNSCNFLNVRRGRWEPIDYWERMIQGLSTAELNNAALTLWFIWNYRNQCLHNDQ 601
P+S NF D+ IQ L++ ++ W +W RN + ++Q
Sbjct: 555 ASTQKWPHSHNF----------ADFVHHGIQSLTSPDIELLFTIAWKLWVARNDRMWDNQ 614
Query: 602 QIDIQELKRKISIILEEFAENSEKKQNLDRLESSSSHARWRPPDNQHWKLNSDASWCEKE 661
+ +++ + ++ +F + + + + +W PP + +K+N W
Sbjct: 615 FVAARDIIYRAGSLVSDFLYQEQTSHD----QITRVLCKWNPPSDSVYKINVAVQWRSLT 674
Query: 662 RAGGLGWSIRDSNGSLIGAGCKRVFQKGSIKWLEAKALLEGLKALVSQMEERIPIPFLPL 721
+GG G IRDS+GS+I A C Q G L A A+ + L L +M+ L
Sbjct: 675 SSGGFGIVIRDSSGSVIAAMCDTSSQLGDELQLFAFAIQKSL-WLAKEMDCH------SL 734
Query: 722 TVETDAGEVVKILNHEVEDLSEISMVIDDIEDTALLANVTSYSKCSRLENQEAHLLAR 765
VE D ++ L L+ ++D+I++ + L T ++ R N + LA+
Sbjct: 735 IVEGDCSALLGSLKTPGPCLAYYGTLVDEIKELSSLFLHTIFNTIPRSCNLVSFSLAK 769
BLAST of Lcy04g009390 vs. ExPASy TrEMBL
Match:
A0A2N9F7C1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10641 PE=4 SV=1)
HSP 1 Score: 521.9 bits (1343), Expect = 4.7e-144
Identity = 285/782 (36.45%), Postives = 422/782 (53.96%), Query Frame = 0
Query: 1 MKLDMSKAYDRVEWAFLRQAMGKMGFSGCWIDRIMRCIESVQFSVLINGVPQEVFRPRRG 60
+KLDMSKAYDRVEW FL+Q M +MGF WI IM CI +V +S+LING P P RG
Sbjct: 895 LKLDMSKAYDRVEWGFLKQVMVRMGFHDRWISLIMECISTVTYSILINGNPTGHITPTRG 954
Query: 61 LRQGDPLSPYLFLICSEGLSTLLKREESQNHISGIRINYHCPTLTHLFFADDSLIFFKAT 120
LRQGDP+SPYLFL+C+EGL+ L+++ Q I G+ + P +T+LFFADDSL+F +A+
Sbjct: 955 LRQGDPISPYLFLLCAEGLNGLIRKASLQGEIHGVSLCPRGPKITNLFFADDSLLFCRAS 1014
Query: 121 VEEGERIKEVLHIYEKATGQKINLDKSACVVSKNVAMPKALEISKRLGINLTDSLGHYLG 180
+ E ++I+E+L IYEKA+GQ++N K+ SKN ++ + LG+ YLG
Sbjct: 1015 LPECQKIQEILTIYEKASGQQLNRAKTTLFFSKNTPQAMQEDLKEILGVPSIQQYEKYLG 1074
Query: 181 LPAQSGRKKVDLFKSLRERVWKVLQGWKGCLFSLGGKEILIKAIAQAIPLYTMSCFKLPI 240
LP+ G++K+ F ++ERVW ++GWK L S G+EILIKA+ QAIP YTM+CFKLP+
Sbjct: 1075 LPSLIGKEKITCFSQIKERVWSKVKGWKEKLLSQAGREILIKAVVQAIPTYTMNCFKLPV 1134
Query: 241 SVCDEINRLCACFWWGSTSSKKKVHWLSWRKMCRSKGSGGMGFRDLHDFNQVMLAKVSWR 300
++C EI + FWWG +K+HWL W K+CR KG+GG+GFRDL FN +LAK WR
Sbjct: 1135 TLCKEIEGIIRRFWWGHNGENRKIHWLKWEKLCRPKGTGGLGFRDLQKFNLALLAKQFWR 1194
Query: 301 VIKNPDSLMAKVLRGRYFQDGDFLRAKIGNNPSLTWRSIVWGRSLFIKGMRWKIGS---- 360
++ N +SL+ KV ++F G+ + A N S WRSI+ + L GM W++G
Sbjct: 1195 LMHNTNSLLYKVFSAKFFPHGNIMEASEKNRGSFAWRSILKAKELIQSGMSWRVGDGIRI 1254
Query: 361 --DEDPWLVKGGNKIPLTVRADF--KGKKLNVILNNEGDWKVDLVRKAFEVEEATTIINI 420
WL+ G++ L+ D + + +I + W ++ V+ F +A I+ I
Sbjct: 1255 PIKGSNWLLDEGHRRVLSPLPDLPKDARVVELIHGSPPKWNINKVQSLFLPYDAEAILKI 1314
Query: 421 PRGKSSAPDSIIWDKEPKGVFTVRSAYHLATRLSRKDEATGAEDSNSKKLWNAIWNLKCI 480
P + D I W G ++VRS Y L + +R +A + + LW IW
Sbjct: 1315 PLSERVQEDKIFWFDTRDGKYSVRSGYKLLLKDARVFQAESSRHWDPDPLWKRIWGASVP 1374
Query: 481 PRAKILVWKIITNALPTKVNLMHKGINSNNGSLFCRSKAESTEHTFWECKFARKIWVWCL 540
+ K +W+ ++LPT L + + N C+S+ E + H W C ++W
Sbjct: 1375 TKVKSFLWRACHDSLPTNSGLFQRKVLPNPLCGLCQSQREDSLHALWACSQVSQVWNGA- 1434
Query: 541 PNSCNFLNVRRGRWEPIDYWERMIQGLSTAELNNAALTLWFIWNYRNQCLHNDQQIDIQE 600
P F N R D ++Q S L A+T W IWN RN H+ +
Sbjct: 1435 PEFSVFQN--RDPRSFSDLVRHVMQTDSDNLLEKLAVTCWLIWNKRNHDRHHPPSEQYSQ 1494
Query: 601 LKRKISIILEEF-AENSEKKQNLDRLESSSSHARWRPPDNQHWKLNSDASWCEKERAGGL 660
L + +L E+ A N+E+K + ARWR P N ++K+N D + + +GG+
Sbjct: 1495 LWTRAQSVLHEYLAVNTEEKAQ----KPKPPQARWRLPVNHYYKMNFDGAIFKDSNSGGI 1554
Query: 661 GWSIRDSNGSLIGAGCKRVFQKGSIKWLEAKALLEGLKALVSQMEERIPIPFLPLTVETD 720
G IRD+ G +I ++VF +++ +EA L +A++ E I + VE D
Sbjct: 1555 GVVIRDNTGQVIATLSQKVFGTHTVEMIEA---LAARRAIIFAREVGID----DVEVEGD 1614
Query: 721 AGEVVKILNHEVEDLSEISMVIDDIEDTALLANVTSYSKCSRLENQEAHLLARAAVGSGN 774
A ++K L+ + +VI+D + S S R N AH LAR A G +
Sbjct: 1615 AENIIKDLSSNDPLHTPYGLVIEDAKALIQDLQQFSLSHTRRSGNSVAHALARRASGCNS 1662
BLAST of Lcy04g009390 vs. NCBI nr
Match:
XP_030502375.1 (uncharacterized protein LOC115717530 [Cannabis sativa])
HSP 1 Score: 540.0 bits (1390), Expect = 3.4e-149
Identity = 294/801 (36.70%), Postives = 430/801 (53.68%), Query Frame = 0
Query: 5 MSKAYDRVEWAFLRQAMGKMGFSGCWIDRIMRCIESVQFSVLINGVPQEVFRPRRGLRQG 64
MSKA+DRVEW F+ + M KMGF+ WI IM C+ + FS LING P RGLRQG
Sbjct: 1 MSKAFDRVEWRFIEEVMRKMGFAERWISLIMSCLTTNSFSFLINGEVMGNLTPSRGLRQG 60
Query: 65 DPLSPYLFLICSEGLSTLLKREESQNHISGIRINYHCPTLTHLFFADDSLIFFKATVEEG 124
PLSPYLFLICSEG S LL+ ++ ++ G ++ H P +THLFFADDSL+F +AT
Sbjct: 61 CPLSPYLFLICSEGFSRLLQHQQEIGNLMGFKLTRHAPPITHLFFADDSLLFCQATERSC 120
Query: 125 ERIKEVLHIYEKATGQKINLDKSACVVSKNVAMPKALEISKRLGINLTDSLGHYLGLPAQ 184
IK VL Y KA+GQ++NL KS S N + + ++L + + + YLGLP+
Sbjct: 121 LAIKSVLETYHKASGQELNLSKSVMSFSPNTTLAAQVFFHQQLAMPICECHEKYLGLPSY 180
Query: 185 SGRKKVDLFKSLRERVWKVLQGWKGCLFSLGGKEILIKAIAQAIPLYTMSCFKLPISVCD 244
SGR K ++F ++E++WK++ W F GGKE+L+KA+ Q+IP Y MSCF+LP+ C
Sbjct: 181 SGRDKKEMFSHIKEKIWKLMNTWHEKFFLAGGKEVLLKAVVQSIPTYAMSCFRLPVYFCK 240
Query: 245 EINRLCACFWWGSTSSKKKVHWLSWRKMCRSKGSGGMGFRDLHDFNQVMLAKVSWRVIKN 304
++ + FWWG T + K+HW SW +C+SK GGMGFR FNQ +LAK +WR+ N
Sbjct: 241 QVESMMVNFWWGLTENGSKIHWRSWNLLCKSKSEGGMGFRSFIHFNQALLAKQAWRIYDN 300
Query: 305 PDSLMAKVLRGRYFQDGDFLRAKIGNNPSLTWRSIVWGRSLFIKGMRWKIG------SDE 364
PDSL+++VL+ RYF + FL A +G++PSLTW+ I W R L +KG+RWK+G SD
Sbjct: 301 PDSLLSRVLKSRYFPNNTFLEASLGHSPSLTWQGIHWARELLLKGLRWKVGDGRHIQSDY 360
Query: 365 DPWLVKGGNKIPLTVRADFKGKKLNVILNNEGDWKVDLVRKAFEVEEATTIINIPRGKSS 424
DPW+ +P + G N+I ++E W V ++ + F + I+ IP S
Sbjct: 361 DPWIPGHNTFLPFLYKGPSNGVVANLI-SDERQWNVPILHQFFSPADVDRILTIPLSYFS 420
Query: 425 APDSIIWDKEPKGVFTVRSAYHLATRLSRKDEATGAEDSNSKKLWNAIWNLKCIPRAKIL 484
D++IW G++TV S YHL + L D+++ + +S W W+L+ P+ KI
Sbjct: 421 GRDTLIWHHHSTGLYTVSSGYHLVSDLDTMDQSSSSRVHSS--WWKFFWSLQLPPKVKIF 480
Query: 485 VWKIITNALPTKVNLMHKGINSNNGSLFCRSKAESTEHTFWECKFARKIWVWCLPNSCNF 544
WK + +ALP L+ + + +++ C+ ES H + C++AR +W +S +F
Sbjct: 481 AWKAVHDALPIATLLVKRKVITDSTCSVCKQAWESVGHALFHCRYARAVW---RNSSLSF 540
Query: 545 LNVRRGRWEPIDYWERMIQGLSTAELNNAALTLWFIWNYRNQCLHNDQQIDIQELKRKIS 604
+ DY + LS AE+ TLW IWN RN+ +H Q L +
Sbjct: 541 DWRLAATMQKGDYIFHLSSILSKAEMEQLFCTLWTIWNERNRAVHGQQARPAAGLASYAA 600
Query: 605 IILEEFAENSEKKQNLDRLESSSSHAR----------------------------WRPPD 664
L + N++++ ++++H + WRPPD
Sbjct: 601 TYLSNY-RNAQQRHGTAATTAATAHQQAHQTTATAASPPRSNPRPSLQAVPATRLWRPPD 660
Query: 665 NQHWKLNSDASWCEKERAGGLGWSIRDSNGSLIGAGCKRVFQKGSIKWLEAKALLEGLKA 724
+KLN DA+ G+G IRDSNG ++ K++ +EA AL L
Sbjct: 661 FNLFKLNVDAAVDSSRGVIGVGAIIRDSNGVVVATLSKQLIGNFRSHEMEASALFHSLNW 720
Query: 725 LVSQMEERIPIPFLPLTV-ETDAGEVVKILNHEVEDLSEISMVIDDIED-TALLANVT-S 769
+ Q LP ++ E+DA VV L +S S +I DI + L NV S
Sbjct: 721 AIQQQ--------LPFSIAESDALMVVNALRAPFNSISSFSDLILDISCLLSFLPNVAIS 780
BLAST of Lcy04g009390 vs. NCBI nr
Match:
XP_030923330.1 (uncharacterized protein LOC115950239 [Quercus lobata])
HSP 1 Score: 536.6 bits (1381), Expect = 3.8e-148
Identity = 298/778 (38.30%), Postives = 426/778 (54.76%), Query Frame = 0
Query: 1 MKLDMSKAYDRVEWAFLRQAMGKMGFSGCWIDRIMRCIESVQFSVLINGVPQEVFRPRRG 60
+KLD+SKAYDRVEW FL+ M KMGF WI+R+M C+ + FS+L+NG P E+ +P RG
Sbjct: 974 LKLDISKAYDRVEWHFLQSIMEKMGFPAGWIERVMSCVTTPSFSILVNGKPYEMIQPSRG 1033
Query: 61 LRQGDPLSPYLFLICSEGLSTLLKREESQNHISGIRINYHCPTLTHLFFADDSLIFFKAT 120
+RQGDP+SPYLFL+C+EGL+ LL + E I+G+ I P +T+L FADDSL+F +AT
Sbjct: 1034 IRQGDPISPYLFLLCAEGLTALLNKAELNGMITGVSICRGAPKITNLMFADDSLLFCQAT 1093
Query: 121 VEEGERIKEVLHIYEKATGQKINLDKSACVVSKNVAMPKALEISKRLGINLTDSLGHYLG 180
EGE I E+L IYE+A+GQ INL+KS+ S N + + +I + LG+ D YLG
Sbjct: 1094 RAEGETIAEILQIYERASGQSINLEKSSAYFSTNTSEGQKGQILEILGVKEVDRFVKYLG 1153
Query: 181 LPAQSGRKKVDLFKSLRERVWKVLQGWKGCLFSLGGKEILIKAIAQAIPLYTMSCFKLPI 240
LP GR K + F L++RVWK LQGWKG L S GKEILIKA+AQAIP YTMS F++P+
Sbjct: 1154 LPTLIGRAKYNTFSELKDRVWKKLQGWKGMLLSRAGKEILIKAVAQAIPTYTMSVFQIPL 1213
Query: 241 SVCDEINRLCACFWWGSTSSKKKVHWLSWRKMCRSKGSGGMGFRDLHDFNQVMLAKVSWR 300
+C E+ LCA FWWG +++K+HW SW K+ K GGMGFRDL FN MLAK WR
Sbjct: 1214 KLCSELEALCARFWWGQVGNERKIHWKSWDKLTAPKKEGGMGFRDLRAFNLAMLAKQGWR 1273
Query: 301 VIKNPDSLMAKVLRGRYFQDGDFLRAKIGNNPSLTWRSIVWGRSLFIKGMRWKIGSD--- 360
+++ DSL+ + + RYF FL AK N S WRS++ + + G W++G+
Sbjct: 1274 LVQGFDSLLYRCFKARYFPRSSFLEAKESPNCSFVWRSLMAAQPILQAGYCWRVGNGYSI 1333
Query: 361 ---EDPWLVK-GGNKIPLTVRADFKGKKLNVILNNEGD-WKVDLVRKAFEVEEATTIINI 420
+D WL NK+ +V+ D + ++N E + W + +R F +EA I I
Sbjct: 1334 NAVKDRWLPNFPTNKVLNSVQRDGSEMLVAELINPEFNIWNYEEIRAIFHRDEAEAICQI 1393
Query: 421 PRGKSSAPDSIIWDKEPKGVFTVRSAYHLATRLSRKDEATGAE-DSNSKKLWNAIWNLKC 480
P + PDSI W P+G+F+V+SAYH+A R+ G +K +W+AIW L+
Sbjct: 1394 PLSRRHVPDSIFWLYGPRGLFSVKSAYHVARRILTDANRGGTSMGVVAKNIWSAIWKLRL 1453
Query: 481 IPRAKILVWKIITNALPTKVNLMHKGINSNNGSLFCRSKAESTEHTFWECKFARKIWVWC 540
+ K+ W+ LPT VNL + I ++ C ++EST H W+C + IW
Sbjct: 1454 PNKVKVFAWRACHEILPTAVNLTTRKIIHDDKCSICTRESESTVHALWDCAAVQDIWT-- 1513
Query: 541 LPNSCNFLNVRRGRWEPIDYWERMIQGLSTAELNNAALTLWFIWNYRNQCLHNDQQIDIQ 600
+S R G+ + + E +++ L+ EL+ W +W RN LH +
Sbjct: 1514 -GSSRKLQKTRHGQADMVQLMEELLERLNQDELDLFWTQAWLVWCQRNSLLHGGRLKVPS 1573
Query: 601 ELKRKISIILEEFAENSEKKQNLDRLESSSSHARWRPPDNQHWKLNSDASWCEKERAGGL 660
L + + EF N++ + ++ R + S S W+PP +KLN DA+ G
Sbjct: 1574 SLNLRAEEYITEF-RNAQNRLDVQRTQQSISDI-WQPPPPGEFKLNFDAAVFSDLGRTGY 1633
Query: 661 GWSIRDSNGSLIGAGCKRVFQKGSIKWLEAKALLEGLKALVSQMEERIPIPFLPLTVETD 720
G IR+ G ++ A ++ + L KAL E + F L VE D
Sbjct: 1634 GAIIRNEKGEVMAA---MSASGPMVRNSDEAEFLACRKAL----EFGVDAGFSRLIVEGD 1693
Query: 721 AGEVVKILNHEVEDLSEISMVIDDIEDTALLANVTSYSKCSRLENQEAHLLARAAVGS 770
V ++ + + S V+DDI S R NQ AH+LA+ A S
Sbjct: 1694 NINVTHAISSSLVNASPFGYVLDDICHLLRSLQRVSVGCTRRGGNQVAHVLAQYARNS 1739
BLAST of Lcy04g009390 vs. NCBI nr
Match:
XP_023901742.1 (uncharacterized protein LOC112013579 [Quercus suber])
HSP 1 Score: 525.4 bits (1352), Expect = 8.7e-145
Identity = 300/785 (38.22%), Postives = 427/785 (54.39%), Query Frame = 0
Query: 1 MKLDMSKAYDRVEWAFLRQAMGKMGFSGCWIDRIMRCIESVQFSVLINGVPQEVFRPRRG 60
+KLDMSKA+DRVEW+F++ M K+GF WI IM C+ SV +SVLING P RG
Sbjct: 422 IKLDMSKAFDRVEWSFIKGVMEKLGFMEKWIHLIMNCVSSVSYSVLINGEAYGNITPSRG 481
Query: 61 LRQGDPLSPYLFLICSEGLSTLLKREESQNHISGIRINYHCPTLTHLFFADDSLIFFKAT 120
+RQGDPLSP LFL+C+EGLS L+ I+GI I CP +THLFFADDSL+F KA
Sbjct: 482 IRQGDPLSPCLFLLCAEGLSALIHEAARNQQINGISICRGCPLITHLFFADDSLLFCKAK 541
Query: 121 VEEGERIKEVLHIYEKATGQKINLDKSACVVSKNVAMPKALEISKRLGINLTDSLGHYLG 180
+E + +L+ YE+A+GQKIN DKS+ S N + I LG YLG
Sbjct: 542 EQECHALVSILNRYEEASGQKINTDKSSVFFSPNTSQELRESIFNILGPMQDSRHSKYLG 601
Query: 181 LPAQSGRKKVDLFKSLRERVWKVLQGWKGCLFSLGGKEILIKAIAQAIPLYTMSCFKLPI 240
LP+ G+ K +F +++RV K L GWKG L S+GG+EILIKA+AQA+P YTMSCF+LP
Sbjct: 602 LPSIIGKSKAQVFAEVKDRVAKKLAGWKGKLLSIGGREILIKAVAQAVPTYTMSCFQLPK 661
Query: 241 SVCDEINRLCACFWWGSTSSKKKVHWLSWRKMCRSKGSGGMGFRDLHDFNQVMLAKVSWR 300
++C ++ L FWWG + K+ W+SWRKMCRSK GGMGFR++ FN MLAK WR
Sbjct: 662 TLCQDLESLMRSFWWGQKDKENKIAWVSWRKMCRSKLHGGMGFRNIQAFNLAMLAKQGWR 721
Query: 301 VIKNPDSLMAKVLRGRYFQDGDFLRAKIGNNPSLTWRSIVWGRSLFIKGMRWKIGSD--- 360
++ NP+SLMA+V + +YF D L +K G+NPS WRSI + KG RW++G+
Sbjct: 722 ILTNPNSLMARVFKAKYFPFDDVLNSKKGSNPSYAWRSIHNSLDVIRKGTRWRVGNGRRI 781
Query: 361 ---EDPWLVKGGNKIPLTVRADFKGKKL--NVILNNEGDWKVDLVRKAFEVEEATTIINI 420
+D WL ++ R D+ + ++I + WKVD++ F EA TI+ I
Sbjct: 782 HIWDDRWLPTPTTHKVVSPRVDYGDFPMVSSLIDLDTRRWKVDVINATFLPHEANTILKI 841
Query: 421 PRGKSSAPDSIIWDKEPKGVFTVRSAYHLATRLSRKDEATGAEDSNS-KKLWNAIWNLKC 480
P + D +IW +G FTV+SAY++A+ L E + NS LW IW LK
Sbjct: 842 PLSFNLPEDCLIWIGNKRGEFTVKSAYYIASDLVDSVEEGESTSGNSWSLLWKRIWQLKV 901
Query: 481 IPRAKILVWKIITNALPTKVNLMHKGINSNNGSLFCRSKAESTEHTFWECKFARKIWV-W 540
P+ KI W+ N LPT NL H+G++ ++ C E+ H C+ A+ W W
Sbjct: 902 PPKIKIFAWRTCVNGLPTMQNLNHRGVHCSSFCPLCDKAIETITHALLHCEHAKLTWAFW 961
Query: 541 C-----LPNSCNFLNVRRGRWEPIDYWERMIQGLSTAELNNAALTLWFIWNYRNQCLHND 600
C L SC+ + + +D +I S +L W IW RNQ +H D
Sbjct: 962 CNSPVDLSTSCDMVEI------ALD----IIAKGSLHDLELFFAVAWSIWWNRNQAIHED 1021
Query: 601 QQIDIQELKRKISIILEEFAENSEKKQNLDRLESSSSHARWRPPDNQHWKLNSDASWCEK 660
+ +L EF + L + +RW+ P + ++K+N+DA+ +
Sbjct: 1022 SGSPPIQAWELAGGVLAEF----KAACLCPALSQALPLSRWKAPPSGYFKINTDAAAFDD 1081
Query: 661 ERAGGLGWSIRDSNGSLIGAGCKRVFQKGSIKWLEAKALLEGLKALVSQMEERIPIPFLP 720
ER +G IRD G ++ A K + + EA A+ EG+ L ++ME I
Sbjct: 1082 ERCSCIGVVIRDCRGVVLAASSKVLSASFPAEISEALAMQEGV-LLAAEMEVSHAI---- 1141
Query: 721 LTVETDAGEVVKILNHEVEDLSEISMVIDDIEDTALLANVTSYSKCSRLENQEAHLLARA 771
E+D+ +++ ++ ++ E +I +I + A S+ R N+ AH LAR
Sbjct: 1142 --FESDSLSIIQAISEKLHG-GEFGHIIRNIWEVAASFTWCSFKHLKREGNKVAHELARI 1184
BLAST of Lcy04g009390 vs. NCBI nr
Match:
XP_030502555.1 (uncharacterized protein LOC115717715 [Cannabis sativa])
HSP 1 Score: 523.9 bits (1348), Expect = 2.5e-144
Identity = 294/783 (37.55%), Postives = 423/783 (54.02%), Query Frame = 0
Query: 2 KLDMSKAYDRVEWAFLRQAMGKMGFSGCWIDRIMRCIESVQFSVLINGVPQEVFRPRRGL 61
KLDMSKA+DRVEW+F+ MGKMGF+ WI IM C+ + FS LING +P+RGL
Sbjct: 588 KLDMSKAFDRVEWSFIAAVMGKMGFNVKWISLIMTCLHTNSFSFLINGEVLGSVQPQRGL 647
Query: 62 RQGDPLSPYLFLICSEGLSTLLKREESQNHISGIRINYHCPTLTHLFFADDSLIFFKATV 121
RQGDPLSPYLFLICSEGLS LL+ EE + G+ ++ H P++THL FADDSL+F +A
Sbjct: 648 RQGDPLSPYLFLICSEGLSRLLQYEEKIGRLQGLAVSRHSPSITHLLFADDSLLFCRAND 707
Query: 122 EEGERIKEVLHIYEKATGQKINLDKSACVVSKNVAMPKALEISKRLGINLTDSLGHYLGL 181
IK L +Y +A+GQ +N DKS S N L + LG+ + D YLGL
Sbjct: 708 RSCGSIKRALDVYHRASGQLLNTDKSVMSFSPNTPDTVKLSFQQILGMPICDCHETYLGL 767
Query: 182 PAQSGRKKVDLFKSLRERVWKVLQGWKGCLFSLGGKEILIKAIAQAIPLYTMSCFKLPIS 241
PA S R K LF +++ER+WK++ W +FS+GGKE+L+KA+ QAIP Y MSCF+L
Sbjct: 768 PAYSERDKSQLFNNIKERIWKLMHAWNDKIFSIGGKEVLLKAVVQAIPTYAMSCFRLSTK 827
Query: 242 VCDEINRLCACFWWGSTSSKKKVHWLSWRKMCRSKGSGGMGFRDLHDFNQVMLAKVSWRV 301
C +I + A FWWGS++ KK+HW W+ +C SKG G +GFR FNQ LAK +WRV
Sbjct: 828 FCKQIESMMARFWWGSSTDNKKIHWKGWKSLCTSKGDGRLGFRSFVHFNQAFLAKQAWRV 887
Query: 302 IKNPDSLMAKVLRGRYFQDGDFLRAKIGNNPSLTWRSIVWGRSLFIKGMRWKIGSD---- 361
+NP SL+++VL+GRY+ DFL AK SLTW+ I+WGR L +G+R KIG+
Sbjct: 888 FQNPHSLLSRVLQGRYYHHTDFLSAKASGLSSLTWQGILWGRELLQQGLRIKIGTGTTVS 947
Query: 362 --EDPWLVKGGNKIPLTVRADFKGKKLNVI---LNNEGDWKVDLVRKAFEVEEATTIINI 421
D W+ G+ R F G N++ + + +W +L+ + F + I+ I
Sbjct: 948 CANDSWI--PGHDFFKPFR--FTGPSNNLVAHYITDAREWNWELLHRDFSPADVEKILTI 1007
Query: 422 PRGKSSAPDSIIWDKEPKGVFTVRSAYHLATRLSRKDEATGAEDSNSKKLWNAIWNLKCI 481
P +S D IW E G +TV+S Y LA L +D+ + + + + W W L
Sbjct: 1008 PLSYNSMSDCWIWHYECSGEYTVKSRYTLACSLENRDQTSSS--GSQETWWKRFWGLTLP 1067
Query: 482 PRAKILVWKIITNALPTKVNLMHKGINSNNGSLFCRSKAESTEHTFWECKFARKIWVWCL 541
+ +I WK+I +ALP NL H+ + ++ C ES H + C A+ +W
Sbjct: 1068 SKVRIFGWKVINSALPVATNLFHRKVITSATCSLCSRVWESIGHALFSCCHAKAVW---- 1127
Query: 542 PNSCNFLNVRRGRW-EPIDYWERMIQGLSTAELNNAALTLWFIWNYRNQCLHNDQQIDIQ 601
N+ L+ ++ + + DY + L+ +EL T+WFIW+ RN +H Q
Sbjct: 1128 QNTGFQLDFQKASYMKDGDYLMFLSTILTNSELERLFCTMWFIWSDRNNFIHGKQLKQPM 1187
Query: 602 ELKRKISIILEEFAENSEKKQNLD---RLESSSSHARWRPPDNQHWKLNSDASWCEKERA 661
+ + L F NS + Q R+ + + +W PP K+N DA+
Sbjct: 1188 AISSQAEAYLANF--NSVQLQATPATFRVAADVNRVKWTPPPETKLKMNVDAAIDSSRSK 1247
Query: 662 GGLGWSIRDSNGSLIGAGCKRVFQKGSIKWLEAKALLEGLKALVSQMEERIPIPFLPLTV 721
G+G IRDS+GS++ A K + +EAKA+ GL+ L Q++ ++ V
Sbjct: 1248 IGMGVIIRDSSGSVVAAMSKPAVGNFKSQEMEAKAMFWGLQ-LAEQLQLQLHY------V 1307
Query: 722 ETDAGEVVKILNHEVEDLSEISMVIDDIEDTALLANVTSYSKCSRLENQEAHLLARAAVG 772
ETD +V +N S ++ DI ++ S R NQ AH LA+ A+
Sbjct: 1308 ETDCLMLVTAINGAQSQHSSFHDLVKDISYHLSSSSNACISHVRRDANQAAHGLAKQALQ 1351
BLAST of Lcy04g009390 vs. NCBI nr
Match:
XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber])
HSP 1 Score: 523.9 bits (1348), Expect = 2.5e-144
Identity = 296/781 (37.90%), Postives = 442/781 (56.59%), Query Frame = 0
Query: 1 MKLDMSKAYDRVEWAFLRQAMGKMGFSGCWIDRIMRCIESVQFSVLINGVPQEVFRPRRG 60
+KLDMSKAYDRVEW F++Q M KMGF WI +M CI SV +S+L+NG P RG
Sbjct: 413 IKLDMSKAYDRVEWGFIKQVMEKMGFHEKWIKLVMHCITSVSYSILVNGGAYGSITPTRG 472
Query: 61 LRQGDPLSPYLFLICSEGLSTLLKREESQNHISGIRINYHCPTLTHLFFADDSLIFFKAT 120
LRQGDP+SPY+FL+C++G S+LL + ISG+ I CP +THLFFADDSL+F KA
Sbjct: 473 LRQGDPISPYIFLLCADGFSSLLNDVARKLRISGVSICRGCPKITHLFFADDSLLFCKAN 532
Query: 121 VEEGERIKEVLHIYEKATGQKINLDKSACVVSKNVAMPKALEISKRLGINLTDSLGHYLG 180
+E + + ++L +YE A+GQKIN+DKS+ S N K E+ + LG YLG
Sbjct: 533 SQECQTLIDILQLYEDASGQKINVDKSSVFFSNNTPDEKRCEVLRMLGHMQDTRHKKYLG 592
Query: 181 LPAQSGRKKVDLFKSLRERVWKVLQGWKGCLFSLGGKEILIKAIAQAIPLYTMSCFKLPI 240
LP+ G+ KV++F ++ERV + L GWK L S+GG+EILIKA+AQAIP YTMSCF++P
Sbjct: 593 LPSIIGKSKVEIFAEVKERVERKLSGWKEKLLSVGGREILIKAVAQAIPTYTMSCFQIPK 652
Query: 241 SVCDEINRLCACFWWGSTSSKKKVHWLSWRKMCRSKGSGGMGFRDLHDFNQVMLAKVSWR 300
++C+EI + FWWG + K+ W+SW+K+C++K +GGMGFR+L FN MLAK WR
Sbjct: 653 TLCEEIEAMMRRFWWGQRGQESKIAWVSWKKLCKAKKNGGMGFRNLQAFNLAMLAKQGWR 712
Query: 301 VIKNPDSLMAKVLRGRYFQDGDFLRAKIGNNPSLTWRSIVWGRSLFIKGMRWKIGSD--- 360
+I NP+SL+A++ + RY+ GD +AK+G +PS TWRSI G + +G RW++G+
Sbjct: 713 LISNPNSLVAQIYKARYYPHGDVFQAKLGASPSYTWRSIFNGLEVVRRGTRWRVGNGERI 772
Query: 361 ---EDPWLVKGGNKIPLTVRADFKGK------KLNVILNNEGD-WKVDLVRKAFEVEEAT 420
ED WL P+T + K +++ +++ E WK D+VR F EA
Sbjct: 773 LIWEDKWL-----PTPITYKVISPPKPFDDYPRVSALIDRERKRWKDDVVRDLFLPFEAR 832
Query: 421 TIINIPRGKSSAPDSIIWDKEPKGVFTVRSAYHLATRLSRKDEATGAEDSNSKK-LWNAI 480
TI++IP + D IIW KG F+V+SAY++A + E + +S+ LW +
Sbjct: 833 TILSIPLSHNFPEDQIIWVGNRKGEFSVKSAYYIAVGVIDNLEVGESSSGDSRSLLWRKL 892
Query: 481 WNLKCIPRAKILVWKIITNALPTKVNLMHKGINSNNGSLFCRSKAESTEHTFWECKFARK 540
W+L P+ +I WK+ NALPT +NL+ KG+N + C + ES H F +C+ A++
Sbjct: 893 WHLNIPPKVRIFAWKMCMNALPTFLNLLRKGVNICDVCPACGMEPESNIHIFVKCEVAKR 952
Query: 541 IWVWCLPNSCNFLNVRRGRWEPIDYWERMIQGLSTAELNNAALTLWFIWNYRNQCLHND- 600
+W L N + +NV + +D +++ + ++L + W IW RN+ +
Sbjct: 953 VWRCWLDNPADLVNV---NMDIVDIAMKILDFGTPSDLEIFFVVAWAIWCNRNKIVFESL 1012
Query: 601 QQIDIQELKRKISIILEEFAENSEKKQNLDRLESSSSHARWRPPDNQHWKLNSDASWCEK 660
Q+ I ILE ++ Q L + S +W P +K+N D + E
Sbjct: 1013 SQVPEFIWGFAIKYILEFKNASATYCQILPQ-----SDGKWMAPPPGVFKINVDGATSEY 1072
Query: 661 ERAGGLGWSIRDSNGSLIGAGCKRVFQKGSIKWLEAKALLEGLKALVSQMEERIPIPFLP 720
R +G IRD+ G + A C + + S++ +EA A+ G L+ E+++P
Sbjct: 1073 GRNSSVGVIIRDATGDVCAACCTYLQGQYSVEEVEALAMERG---LLLAKEQKLP----Q 1132
Query: 721 LTVETDAGEVVKILNHEVEDLSEISMVIDDIEDTALLANVTSYSKCSRLENQEAHLLARA 767
+ +E+DA VV +N E + + I + R N+ AH LA+
Sbjct: 1133 IIMESDALVVVSKVN-SAETSGCLGHIYQGILSLLSSFGCWKINHVKREYNKAAHELAQY 1172
BLAST of Lcy04g009390 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 236.1 bits (601), Expect = 9.9e-62
Identity = 162/587 (27.60%), Postives = 271/587 (46.17%), Query Frame = 0
Query: 227 AIPLYTMSCFKLPISVCDEINRLCACFWWGSTSSKKKVHWLSWRKMCRSKGSGGMGFRDL 286
A+P YTM+CF LP +VC +I + A FWW + K +HW +W + K GG+GF+D+
Sbjct: 2 ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61
Query: 287 HDFNQVMLAKVSWRVIKNPDSLMAKVLRGRYFQDGDFLRAKIGNNPSLTWRSIVWGRSLF 346
FN +L K WR++ P+SLMAKV + RYF D L A +G+ PS W+SI + +
Sbjct: 62 EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121
Query: 347 IKGMRWKIGSDED------PWL-------VKGGNKIPLTVRADFKG-KKLNVILNNEG-D 406
+G R +G+ ED WL ++P A K++ +++ G +
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGRE 181
Query: 407 WKVDLVRKAFEVEEATTIINIPRGKSSAPDSIIWDKEPKGVFTVRSAYHLATR-LSRKDE 466
W+ D++ F E I + G DS WD G +TV+S Y + T+ ++++
Sbjct: 182 WRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSS 241
Query: 467 ATGAEDSNSKKLWNAIWNLKCIPRAKILVWKIITNALPTKVNLMHKGINSNNGSLFCRSK 526
+ + ++ IW + P+ + +WK ++N+LP L ++ ++ + + C S
Sbjct: 242 PQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSC 301
Query: 527 AESTEHTFWECKFARKIWV-----------WCLPNSCNFLNV-RRGRWEPIDYWERMIQG 586
E+ H ++C FAR W W N V G P WE+ Q
Sbjct: 302 KETVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNP--QWEKASQ- 361
Query: 587 LSTAELNNAALTLWFIWNYRNQCLHNDQQIDIQELKRKISIILEEF-----AENSEKKQN 646
LW +W RN+ + ++ + QE+ R+ LEE+ AE+ K
Sbjct: 362 -------LVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQ 421
Query: 647 LDRLESSSSHARWRPPDNQHWKLNSDASWCEKERAGGLGWSIRDSNGSLIGAGCKRVFQK 706
++R SS RWRPP +Q K N+DA+W G+GW +R+ +K
Sbjct: 422 VNR----SSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRN--------------EK 481
Query: 707 GSIKWLEAKALLEGLKALVSQMEERIPIPFLPLT--------VETDAGEVVKILNHEVED 766
G +KW+ A+AL + LK+++ E + L L+ E+D+ +++ILN++ E
Sbjct: 482 GEVKWMGARALPK-LKSVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNND-EI 541
Query: 767 LSEISMVIDDIEDTALLANVTSYSKCSRLENQEAHLLARAAVGSGNF 773
+ I D++ + R N A +AR ++ N+
Sbjct: 542 WPSLKPTIQDLQRLLSQFTEVKFVFIPREGNTLAERVARESLSFLNY 558
BLAST of Lcy04g009390 vs. TAIR 10
Match:
ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 135.6 bits (340), Expect = 1.8e-31
Identity = 57/130 (43.85%), Postives = 85/130 (65.38%), Query Frame = 0
Query: 227 AIPLYTMSCFKLPISVCDEINRLCACFWWGSTSSKKKVHWLSWRKMCRSK-GSGGMGFRD 286
A+P+Y MSCF+L +C ++ FWW S +K+K+ W++W+K+C+SK GG+GFRD
Sbjct: 2 ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61
Query: 287 LHDFNQVMLAKVSWRVIKNPDSLMAKVLRGRYFQDGDFLRAKIGNNPSLTWRSIVWGRSL 346
L FNQ +LAK S+R+I P +L++++LR RYF + +G PS WRSI+ GR L
Sbjct: 62 LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121
Query: 347 FIKGMRWKIG 356
+G+ IG
Sbjct: 122 LSRGLLRTIG 131
BLAST of Lcy04g009390 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 124.8 bits (312), Expect = 3.2e-28
Identity = 117/488 (23.98%), Postives = 196/488 (40.16%), Query Frame = 0
Query: 313 LRGRYFQDGDFLRAKIGNNPSLTWRSIVWGRSLFIKGMRWKIGSDED-----PWLVKGGN 372
++ RYF+D L AK+ S W S++ G +L KG R IG ++ +V
Sbjct: 1 MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHP 60
Query: 373 KIPLTVRADFKGKKLNVILNNEGD---WKVDLVRKAFEVEEATTIINIPRGKSSAPDSII 432
PL +K +N + +G W + + + + I I KS PD II
Sbjct: 61 PRPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKII 120
Query: 433 WDKEPKGVFTVRSAYHLATRLSRKDEATGAEDSNSKKLWNAIWNLKCIPRAKILVWKIIT 492
W+ G +TVRS Y L T + S L IWNL +P+ K +W+ ++
Sbjct: 121 WNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALS 180
Query: 493 NALPTKVNLMHKGINSNNGSLFCRSKAESTEHTFWECKFARKIWVWCLPNSCNFLN--VR 552
AL T L +G+ + C + ES H + C FA W L +S N +
Sbjct: 181 QALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFA--TMAWRLSDSSLIRNQLMS 240
Query: 553 RGRWEPIDYWERMIQGLSTAELNN--AALTLWFIWNYRNQCLHNDQQIDIQELKRKISII 612
E I +Q + ++ + +W IW RN + N + +
Sbjct: 241 NDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAE 300
Query: 613 LEEF--AENSEKKQNLDRLESSSSHARWRPPDNQHWKLNSDASWCEKERAGGLGWSIRDS 672
++ A S KK + + + WR P + K N DA + ++ GW IR+
Sbjct: 301 THDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNH 360
Query: 673 NGSLIGAGCKRVFQKGSIKWLEAKALLEGLKALVSQMEERIPIPFLPLTVETDAGEVVKI 732
G+ I G ++ + E KALL L+ + + + +E D ++ +
Sbjct: 361 YGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIR-------GYTQVFMEGDCQTLINL 420
Query: 733 LNHEVEDLSEISMVIDDIEDTALLAN---VTSYSKCSRLENQEAHLLARAAVGSGNFSYF 784
+N +S S + + +ED + AN + R N+ AH+LA+ G +++
Sbjct: 421 IN----GISFHSSLANHLEDISFWANKFASIQFGFIRRKGNKLAHVLAK--YGCTYSTFY 473
BLAST of Lcy04g009390 vs. TAIR 10
Match:
ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )
HSP 1 Score: 89.0 bits (219), Expect = 1.9e-17
Identity = 37/68 (54.41%), Postives = 50/68 (73.53%), Query Frame = 0
Query: 46 LINGVPQEVFRPRRGLRQGDPLSPYLFLICSEGLSTLLKREESQNHISGIRINYHCPTLT 105
+ING PQ + P RGLRQGDPLSPYLF++C+E LS L +R + Q + GIR++ + P +
Sbjct: 13 IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72
Query: 106 HLFFADDS 114
HL FADD+
Sbjct: 73 HLLFADDT 80
BLAST of Lcy04g009390 vs. TAIR 10
Match:
AT3G25270.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 87.0 bits (214), Expect = 7.4e-17
Identity = 66/271 (24.35%), Postives = 125/271 (46.13%), Query Frame = 0
Query: 466 IWNLKCIPRAKILVWKIITNALPTKVNLMHKGINSNNGSLFCRSKAESTEHTFWECKFAR 525
IW LK P+ K +WK+++ AL T NL + I ++ C + E+++H F++C +A+
Sbjct: 18 IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77
Query: 526 KIWVWCLPNSCNFLNVRRGRWEPIDYWERMIQGLSTAELNN-------AALTLWFIWNYR 585
++W + + + R I +M LS+ N A LW +W R
Sbjct: 78 QVW------RASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSR 137
Query: 586 NQCLHNDQQIDIQELKRKISIILEEFAENSEKKQNLDRLESSSSH-------ARWRPPDN 645
NQ + + I Q ++ ++E+ + + Q+L++ SS H +W+ P +
Sbjct: 138 NQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMARTKWQRPPS 197
Query: 646 QHWKLNSDASWCEKERAGGLGWSIRDSNGSLIGAGCKRVFQKGSIKWLEAKALLEGLKAL 705
K N D ++ + R GW +RD NG +G+G +I + +L +AL
Sbjct: 198 TWIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSG-------QAIGSTTSDSLESEFQAL 257
Query: 706 VSQMEERIPIPFLPLTVETDAGEVVKILNHE 723
+ M+ + + E D+ +V +++N+E
Sbjct: 258 IIAMQHAWSQGYRKVIFEGDSKQVEELMNNE 275
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P0C2F6 | 2.2e-34 | 23.46 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
P93295 | 2.6e-30 | 43.85 | Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... | [more] |
P11369 | 5.9e-19 | 24.67 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
P92555 | 2.7e-16 | 54.41 | Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Q05118 | 6.1e-08 | 28.21 | Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra... | [more] |
Match Name | E-value | Identity | Description | |
A0A803QEG9 | 4.4e-150 | 36.55 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PQ30 | 1.1e-148 | 36.44 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QC75 | 1.4e-148 | 36.06 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A2N9HW96 | 1.1e-145 | 36.89 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2N9F7C1 | 4.7e-144 | 36.45 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10641 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 9.9e-62 | 27.60 | Ribonuclease H-like superfamily protein | [more] |
ATMG00310.1 | 1.8e-31 | 43.85 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
AT3G09510.1 | 3.2e-28 | 23.98 | Ribonuclease H-like superfamily protein | [more] |
ATMG01250.1 | 1.9e-17 | 54.41 | RNA-directed DNA polymerase (reverse transcriptase) | [more] |
AT3G25270.1 | 7.4e-17 | 24.35 | Ribonuclease H-like superfamily protein | [more] |