Lcy04g009130 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTGAAAGAGAGAGAGATCTTGGTCAGAGACAGCTAACATAAAGTTAGCTACATGAAGAAAAAAAGAAAAAAACCAAACATATGTGTTTTTGAGAAAGTCCTAAACTCCACATTTGGTTTACTCTACACTCAATCAAACCAAACCCTGAAAACTTCTACCCTCTTGTTTTTCTTTGTTTGTCTGATCAAAACCCAAAATTGATCTTGAATTCTCCAACAAAAAAGGAACAAAAATGTCGAAATTAAGCTCAAGCAGAAGGGTGAGTTTCAGCTCAGATCAGCCCACACCTCTCCAAAGAAACAAGAAAAGGGTCATCACTGTATTCTGGGTTTTCCGGCTGCCGAAACCCGGCAGGTTCTCGCCGGAAAGTTTCCTCCGCCGCCTCGGCGTCAAAGTCGCCAAAGTTCTCCGCTATGTCTCTTTCAGAAAGAGATCTTCGTCTTCGAAGAATAATAACAACGCAGTCTCTGGTTCTAATTTCAACAGATCCCATTCGGTTTCGGACTCCATGGAAGAATCTCACAGAGCTGAAGCTGTTAAAGATTGCATCCAGTTCTTCAACTCTTCTTCTTCTTCAGCTGTTTGATTTTTATTTTTCTTTTCCAGTCATGTTCTGTAACTGTTAATTAAGGTAATTTCTTGGTTCTTACTTTGTTTCATAATGTTTTTTTTTTCCTTTTTTTCTCTCGAAAAATTGGTTAAATTGTGGTTGTATTAGTTCTCGAACTTTTAGGAGTACGTTTGTTTACCATAAAAAAAAT ATTGAAAGAGAGAGAGATCTTGGTCAGAGACAGCTAACATAAAGTTAGCTACATGAAGAAAAAAAGAAAAAAACCAAACATATGTGTTTTTGAGAAAGTCCTAAACTCCACATTTGGTTTACTCTACACTCAATCAAACCAAACCCTGAAAACTTCTACCCTCTTGTTTTTCTTTGTTTGTCTGATCAAAACCCAAAATTGATCTTGAATTCTCCAACAAAAAAGGAACAAAAATGTCGAAATTAAGCTCAAGCAGAAGGGTGAGTTTCAGCTCAGATCAGCCCACACCTCTCCAAAGAAACAAGAAAAGGGTCATCACTGTATTCTGGGTTTTCCGGCTGCCGAAACCCGGCAGGTTCTCGCCGGAAAGTTTCCTCCGCCGCCTCGGCGTCAAAGTCGCCAAAGTTCTCCGCTATGTCTCTTTCAGAAAGAGATCTTCGTCTTCGAAGAATAATAACAACGCAGTCTCTGGTTCTAATTTCAACAGATCCCATTCGGTTTCGGACTCCATGGAAGAATCTCACAGAGCTGAAGCTGTTAAAGATTGCATCCAGTTCTTCAACTCTTCTTCTTCTTCAGCTGTTTGATTTTTATTTTTCTTTTCCAGTCATGTTCTGTAACTGTTAATTAAGGTAATTTCTTGGTTCTTACTTTGTTTCATAATGTTTTTTTTTTCCTTTTTTTCTCTCGAAAAATTGGTTAAATTGTGGTTGTATTAGTTCTCGAACTTTTAGGAGTACGTTTGTTTACCATAAAAAAAAT ATGTCGAAATTAAGCTCAAGCAGAAGGGTGAGTTTCAGCTCAGATCAGCCCACACCTCTCCAAAGAAACAAGAAAAGGGTCATCACTGTATTCTGGGTTTTCCGGCTGCCGAAACCCGGCAGGTTCTCGCCGGAAAGTTTCCTCCGCCGCCTCGGCGTCAAAGTCGCCAAAGTTCTCCGCTATGTCTCTTTCAGAAAGAGATCTTCGTCTTCGAAGAATAATAACAACGCAGTCTCTGGTTCTAATTTCAACAGATCCCATTCGGTTTCGGACTCCATGGAAGAATCTCACAGAGCTGAAGCTGTTAAAGATTGCATCCAGTTCTTCAACTCTTCTTCTTCTTCAGCTGTTTGA MSKLSSSRRVSFSSDQPTPLQRNKKRVITVFWVFRLPKPGRFSPESFLRRLGVKVAKVLRYVSFRKRSSSSKNNNNAVSGSNFNRSHSVSDSMEESHRAEAVKDCIQFFNSSSSSAV Homology
BLAST of Lcy04g009130 vs. ExPASy TrEMBL
Match: A0A6J1GFL9 (josephin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453490 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 6.7e-36 Identity = 89/126 (70.63%), Postives = 100/126 (79.37%), Query Frame = 0
BLAST of Lcy04g009130 vs. ExPASy TrEMBL
Match: A0A6J1IJN3 (uncharacterized protein LOC111477703 OS=Cucurbita maxima OX=3661 GN=LOC111477703 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 5.3e-33 Identity = 86/125 (68.80%), Postives = 98/125 (78.40%), Query Frame = 0
BLAST of Lcy04g009130 vs. ExPASy TrEMBL
Match: A0A0A0L2K7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308510 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 6.9e-33 Identity = 87/119 (73.11%), Postives = 96/119 (80.67%), Query Frame = 0
BLAST of Lcy04g009130 vs. ExPASy TrEMBL
Match: A0A061EQH2 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021741 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 3.2e-14 Identity = 58/122 (47.54%), Postives = 81/122 (66.39%), Query Frame = 0
BLAST of Lcy04g009130 vs. ExPASy TrEMBL
Match: A0A6A2XKB5 (Sulfoquinovosyldiacylglycerol 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00117056pilonHSYRG01249 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 7.2e-14 Identity = 59/123 (47.97%), Postives = 80/123 (65.04%), Query Frame = 0
BLAST of Lcy04g009130 vs. NCBI nr
Match: XP_023518083.1 (uncharacterized protein LOC111781626 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 160.6 bits (405), Expect = 8.1e-36 Identity = 91/121 (75.21%), Postives = 99/121 (81.82%), Query Frame = 0
BLAST of Lcy04g009130 vs. NCBI nr
Match: XP_022950374.1 (josephin-like protein [Cucurbita moschata]) HSP 1 Score: 159.8 bits (403), Expect = 1.4e-35 Identity = 89/126 (70.63%), Postives = 100/126 (79.37%), Query Frame = 0
BLAST of Lcy04g009130 vs. NCBI nr
Match: KAG6603596.1 (hypothetical protein SDJN03_04205, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 157.5 bits (397), Expect = 6.9e-35 Identity = 92/131 (70.23%), Postives = 101/131 (77.10%), Query Frame = 0
BLAST of Lcy04g009130 vs. NCBI nr
Match: KAG6595400.1 (hypothetical protein SDJN03_11953, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027410.1 hypothetical protein SDJN02_11422, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 154.1 bits (388), Expect = 7.6e-34 Identity = 88/120 (73.33%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of Lcy04g009130 vs. NCBI nr
Match: XP_022977351.1 (uncharacterized protein LOC111477703 [Cucurbita maxima]) HSP 1 Score: 150.2 bits (378), Expect = 1.1e-32 Identity = 86/125 (68.80%), Postives = 98/125 (78.40%), Query Frame = 0
BLAST of Lcy04g009130 vs. TAIR 10
Match: AT3G09032.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01225.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 4.2e-06 Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 0
BLAST of Lcy04g009130 vs. TAIR 10
Match: AT1G07300.1 (josephin protein-related ) HSP 1 Score: 47.8 bits (112), Expect = 7.2e-06 Identity = 31/80 (38.75%), Postives = 45/80 (56.25%), Query Frame = 0
BLAST of Lcy04g009130 vs. TAIR 10
Match: AT5G01225.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09032.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 7.2e-06 Identity = 38/119 (31.93%), Postives = 63/119 (52.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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