Lcy04g008000 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g008000
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RING-type domain-containing protein
Location	Chr04: 38760128 .. 38768330 (-)
RNA-Seq Expression	Lcy04g008000
Synteny	Lcy04g008000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAACTCAATAAATTTCAAAACATTTTTTCCATTTCTCTTCATTTTTCTGGCTTGTATTCCACGAATGATCGTCAACAACGTATAGATTGTAATAGAAATAAAGGTATCAAATTCAAGCCTGTCTGAAATTACGATCAGGATTAGATTATCATCATATTGGAGAGAGCTGACCTTCTTCCCTTTGCCTTTTTCCCCTTTCTCTCTGGTTCGCTCTCTTGCCCTTCTTCCCTCGAGCTTCATAGGGCTTAAATTTCCGCCATTTTTGCATATCATCATCGCCATCGAAACCCCATCAAAGCTTTTTCCATCTTTTTCCCCTTTACCCTTCTTTTACTTCCACCATTTTCGTCCATCTATCCAATCAAACCCTACCCCTCTTCACCCTTTTTGTTGATTCGTTGGTTTCCTTCACTTTTCAATCCGATCATCGCGACCCAGTTGCTCGATTTGCTGATCGAGTCTAGTTTTTGTGTTCTTGTTGTAGCTAGAAAGTACTGTAGATTGGATTTTCTTATCTGGGTTTTTGCCATGTCGTGATTTTCTTTATCTGAGGTCCTCCACGGAGTCTCGTTTGCGGAGAAGGTAATCGAGTTCTGTTTCTTTTACTGGTTCTTGTTAACTTTTTCCTGTTTTTCTTGTTTTTCTTGCCCCTTTTCCTGTGATTTTAGCTTCATTGTCTTTAGCTTGCTTCTTTTACACGGAAATTTGTCTTCCTTCTTTATGTTGTGGGCAATTTTTTTCTCTGTTGTTGCAATGGTTATGATGGATATTATGGCGATTAGGGTTAGGCCATTCACCCGAATGGAAGCGTCTGGTAGCGACCCCGACTCTCATAGAGCTGCTTCCACCAGTGGTAGTTCGAGAAGGTTTGGAATGTTAGCTGCCTCGAATATAATTCAGGCTCCGCTTTCCGCACTGTTAGAGTATTCGGGTCTTCTTCGTGGCCGCCCAAGTCATCAAGAATCCGAGGCATTGATAAGTGCACGACTGCCTTCGGGATTTCGAGACCATCTTCGCAGCCAGATTGAAGAATCTTCTGGTGCTGCGAACGATGGAGAGGTTTCGATTAGGATAATTGGGGCAGGGGAGCCAGAACATGGTAGGGATGGTGCTGGACTGGTAGTTGGGCAAGCGAGGGAAGTCAGCGGTCAGAATGCGGTGTCTTCGCAGTCTGTTTCGGGGTTGGCATCGTCGGAGCTTAGCCAGGGAGACCCTACTACTGAACGTGGTGCAAGAGAGGGCATTCCTCAACCGATTAATGCAGGTGCTGATGGAGATACCTCGGAGGCAGCTGGGGGAAATAGCAGGGATTCTTCTTACCAAAGGTATGATATTCAACAGGCTGCTCGGGGGATTGAGCAGATTCTCCCATTTAGTTTTCTTCTATTGGTGGTCTTCATTCGACAGCATTTGCAAGGTACTTTTCTTGACTTTAATCAAGATTTTAACTCACTGTGGGTTACTGAATTTAATTTACTTCATAATTTTAAATTGTCATTGATGTGGCTGGATTATGGCAGTAGCCAGAAAGGTTTGGATGATCATGAACTACTGCATCTTCTTTCTGGAGCAAGCATATACGCTCTTTACCTTTATTGTTGTTCCTTTTCTTTTCCATCCTTGATTAATTGAACTTCTTAAGTTACACACAGTAAATTCTTAATACTAATCTTAGTTTTTTTCACTTAAAAACTTGGAATTAGTATTGTTCAAGTAGACGTTAAGTTAGTTAACTTAAGGTTTTCTGTATGCATCTATGTAAAAAAAAGCTAAATTAGAGTTGACTGAAATTTTAAAAGCGCTTTTGAAAATCAATGGAATTTAACTTTTATGTTCACTTGGTCATTTTTTTGGGTGTTATTATGGTCTTGATGCTAATTAATTATTATTTTTTTAAAACAAAAAAATTCACATGGTATTGATGCTAATTTTAATGCTTAAGCATTTCGTGGTTTTTATGCAAAATTTACATGCGTTTTTTAAGGAGAAAAATATATGCGTTTGTGTGTATATTATATTGTAACTCAGATGAATTTAATATCATCTATATCAACCTAATTTAATTTAAATTCAGAGTTCTGAAACATATAATTTTTTTTTTCATTCAATAAGGTACCTCAACTCCTCAAATTTTATTCTAAAAAAAAAAAAACTCCTCAAGTTTTATTTTTCTTGAAAAGTTACTTATGTCTAGGTAATTTAGATGAAGAATAATAAAGACAATAAATTGTGATTGCTGAGGTGGTGAATCTTTCCGAGGGCTTTCCTTCTTATTCTTTGGGTTTCCGTCATTTTTTGACCAATTGGGAAACGATGGAGGTCATAGCTCTCTTATCTTTGATCAGGGAGTTTTAGTTTAGGGAGGGGAGGAAGGATGTTCGTTGTTGGAGTCTAAGTCCTTCCAAGGGTTTCTCTTGTAGCTCCTTTTTCCTGTGGTTACTTAACCCTACCCCATAGTGAGTCTATTTTCTCTATTCTATGAAGGGTGATAATTTTTAAGAAGATTAGATTCTTTATCTGGCTAATAGTTATCCATGAAAGAGTCAATATTGAAAAACCTACAAGGAAGATGCCTTTGTTGGTTGGGCTTTTATTTTGTACCCTTTGTTGGAGGGTGGAGGAAGATCTCTGGACCACATCTTGTGGAGTTGCGCTTTTGCTTGATCTGTCTGGAGCTTGTTCTTTGATGCATTCGGGTTGCAGGTCAGGAGTTTCAGAGACCACAGGGAGATGAACAAGGAGTTCCTCCTCCACCCGTCGTTTCCTGACAAGGGGAGGGTGTTATGGCTTGCTGGGTGTGTGTTATTTTGTGGGGCTTGTGGGGAGAGAGAAATAATAGGGTTTTTTGAGGCTCAGAGAGAACCCTGTTCGATGTGTGGGTCCTCACTCAATTCCATGTTTCTATCTGACTTCGATTTCGAATCCCTTTTGTAATTATACATTATGTCTTATTATTCTTGATTGGAGCCCCTTTCTTTAGGAGGTTCCCTTTTGTGAGCTTGTTTTTTGGATGCCCTTGTATTCTTTCATTCTTTCTCAATGAAAATTGGTCTTTTCTCAAATTGTTAGTTAAAAGTTGAAGTCAGAATGAAAGAAAGAAAAAGAAGTGAAAATTGTTCTTTCATTTTTTCTCAATGAAAGCTGGTTCTTTATCCCAAAAAAAAAAAAAGTTTATCATCTTCAATTAATATTTGAGACGAATCAAAAGAAAAAAAAATCCCTGTTTAAGACATTATTGGTTATCACTTGGTACATATGAAAAGATTTAAGAATGATTTTTGTCATTTTGTTTTGACTTTTAAAAGATTTAATTGTTTTAATATTACATGTTTCCACATGTATTTCTCTGCATTTTTTTTTCTCCCTTCTGGTGTTAATATTTGCCTCCTAAACATACTTGCAGGCTTCTTTGTGACAATTTGGATTGCTGCTTTCATGTACAAGTCAAATGATATTTTGCGAAAACAAACAGCTTTGAAGGTGTGTTATGATATACTTTAATGTATAGTATCCATGTAGTGTGTGTGGGGGGAATTTAGAGGTCTTTTTAAAAATGGAAGTGAAGAAGGTAAGAAGTCTTGCCATTAGGAGATTACAAGGAGGCTCGCTAATTGATTAAGTCACAGATAGGGAATGTAAAGGCCTACTTCAAGAGCCTACCCCAATTGTTCGTATTATTAGATATGTTGAAGAGTCATGAGAGTTATATTCTAAGATATCCTTAAGCCACGCATCCTCCCAAAGCTCACCCCTTTCCAGTTTCCACTTTGACCAGCTTAAACAGAAAAACTTTGACGAGCTTGATCTTCCTGTTCATATTTAGAGGAATGAGTGTACGTCTTGAACTATCTTTAATTAGGGAAATGTGGGCATCTAGAGCTACAAAACTATAAGAGCTCCCACGAGGTTTTAGCATCCATTGCCTTGTGAATTGAAATGGTGAGATTGGACCTCCTTTCCTTAACTCTATCATAGCGTTCATCTTCCCCATTGGCCTCCATTGATATATTTACATAGTGGTTGGATTTCTTTTTCCTCTATCTGAAGCTATTTGACCTAACTCTCCTTATTCTGTTGGCTGACATATAGGAGATCACTGGCAATGATCAAACTTGTTGGATATCTTTCCCTAGAATAACACCGACCTTGCTGTATTCTTGCTGTTATTTTTTCTTCATTACAGTTTTTCATTCATAAGCTTTATTGGTTCCTGCAGGGAGAGAGAAAAATCTCTGTTTTAGTTGGCATTTCTCTTGCATTCACCATTCATGTCATTGGTGTCTACTGGTGGTATCAGAATGATGACCTTTTATATCCGTTGATCATGCTTCCTCCCAGAGCAATACCTCCTTTTTGGCATGCTATTTTCATCATCATGGTGAATGGTAACCTTCTGTTTGAGTTATTACTGATTATTATTTTATGTTCGCTGATCATACTCTATAAGCTGTATGGTAACAAAGAAGTGGTTTGCTATGTTAGGCTGTTACATAATTTTCTGCAGTTAATTTATTTTCTCAAATTTCTTTCGAGTGATCATTAAATTCTTAACTGACATTCATATATCCGTAGAATTTGGGGTTAAGGGCACTATCACAATCATTTCATCCTCATGTTTGTAAACTTTGTTGCATGTGCTTCATATTCTTTCTCTTAATGTGCAGTATTTCATAGAGGTGGCAAATATTTCTTCCTTGATATTTTAGATCTACGTACTAAAAAATTAATATTACGTTTATGTCAGTATCTTACTAGTTGTTAAATTGTTTTTAATTATAAGCTATTCCATGCGCATTCTCTCCCATCTGTTTAAGATAAAAAGGCATTTCTGAAAAAGGAATTTCTAAGACTATTTATAATCTATTTGTCTACATTATTGAGTTAAAAACCCACTGTATTAATCTAAAAGCAGAAGTGTATGTTCAGCAAGACTTCTTCTGCAATTTTGTATTACAATGCTTGCATCTCTCTGTCATATTCAACTTGCATTGGCTTGTGTAACTGGTTTAGTGAATTGTATGCTTTTGTGTTTGTTTCTCAGACACTTTGGTTCGTCAGGCAGTGATGGTGGTCAAGTGTATTCTATTGATGTATTACAAGAACACCAGAGGCCGCAATTATCGTAAACAGGTGAGGTAATATAGAAGTTGACTCTTGTTTACTCATCAAACTCCTTTTTGAATCAGCAACAAATATTCATACAGAAAGTGGACCTTTGCTACAATCCTTTCCTTTAATTGAGCTCATTATTGATTTCTCTTTACATTTTTTTTCCTCTACCGAACAAAGTGGTAACCTTAGAATTTACAAACGTTTCTCAGTCTTTGAGAACTCACTATTAACATTCACATTATATCTCCAGGGTCAAATGCTAACTTTAGTCGAATATCTGCTACTACTGTACCGTGCTTTGTTGCCTACTCCCGTCTGGTATCGTTTCTTTTTGAACAAAGAGTATGGGAGTCTATTTTCGTCACTATTGACAGGACTGTACTTAACTTTCAAACTCACATCTGTTGTTGAAAAGGTATGTTTTCTCTTATTTTGAATTTTTTTGACTCATTTTTACTATTATTATGAGCATTTTGTCGCTAGATGGTCTCTCATGTCTGTTATCTCCCTTCCATGTCTCATATTTCTGTCTGATGTGGATTTCAGGTGCAATCCTTCTTTGCTGCCTTGAAAGCGCTGTCTCGTAAAGAGGTGCATTATGGGGCATATGCAACGTCAGAGCAGGTAATTTGGATCCCATTTGTGCATGCCTTTCTTCAATCAATCAAAATTTCTTACCGTTGGATGCCATTTATGTTTATCATTTTATTGTATTTTATTTTTTTGGGTATCTGTGAGTGTTTGATCTGCATCTCGACTAATCTCATAGCACATTTGGATTTATAAAGTATTGCAGCATCTTAAAGCTGTTGGTTTATTTACTTACTATTAATGAAAAGAGTTAGAAATCAATAGAGTTCTGATAAGGCAACTGGGGATCCGCTTTTAATGCCATAAAAGCTGTTTTTGGGGATATTTGGTAGGAAAGAAAGCAAAGAACCTTCAGGAAAGTACTTGGGAATGGAATGAAAGAGTCTTGCTGAAAGCCATGCATCTTTATGGAGTGCAATCTTCTTTTAGTACTTAGTCTTATAATGTATCTTTTTTTTTTTTTTTTTTCCTTTTTATTTTGGAGTTCAACCATTGGAGGGTGAGGGATTGAACCATCGATCTCTGTGATGGTAATAGGTGCCTTGACCAATTCAGCTATGCTCATGTCGGCGTAATCTCTTCTAGTTGGGGGGCCGTTTTAGTAATGTTTCGGCTCCTTTGTTTCAATTTGTAATCAATAGGGGTCCCTTTAAACTTCTATAGGGAATTATTGTTTGCAGGCGATCTATTTGTAACTTTTTATTAATATAGGAATGAATATTAGCGATTGGAAGGCTTTGTTAAATTAGTTTTCGGGCTTGGGTTTCCTCCACCCTTGACCCTTAGGCTGTTCCTACCATTTTTTGTGATTAATATATCTCTCTTTGATGTTTCTTATCAAAAAAAAAAAAAAAAAATATAGGAGGTATGAACGGAGAAGGCAAACTGTCCTTGAGATCGATCTTGTTATTTGCAAACTGTCCTTGAGATCTTACTTGTTATTTGCCTAATGCAGGTCAGTGCAGCTGGTGATTTGTGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCCTACTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAGTGGTAAGTTTATCACATGAAATGCTCCTTTGCTTGATATCTGTGTTCTGCATAATGACAAACGTCCGAACATTTCCCAAGAGGATATGTTTTCGATTTCAGTAACCCAGTACCATCGGTTTCCTCATCGCATGTGCCATTTTTTCACTTGCAAAATGAAAGCATACTCAAGTCTTTGCTGGAATATTTTTAATATTAGTTAGTCCAAGTCAATGTTAATCCAAACATAAGGTTTGATAGAGTTTCATGTTATAACTCACACACTTAATATAGAGTTTCATTATGTGATCTTGAGTTTTGATAGTTTTGTCTGTTTTGAGGATGAGTCTGAGATAGCATTTCTTTTAATTTTATGCTCTTTTCTAGTCATGACTCAAGAGCTATGTCTCCTCTATATGGTGTGCTCAAAGTCTGATCTTAAGACCAACCTTGCTGGACCAGTTTTGACTTAATGATGGAGGAGCTTGTTTGGACTTGATAACAAGGATAGTATGGTAATTAGCAAGGTAGTTTGTAGGGAATAATTGTTGTTAAGTAGAGGGACAGAGATAGGGGAAGGCAAGCCAATATTGTGGTGGTTCATTCTTGAGGGAGCTTAGTGTCCAAGTACCTTGAATTACTCGAAAGAAAAAGTTTCTTCCGGTATTTTCTTTCATTATGATTTTCGAGTCTTATTATCTAGTTCACAAGGAGATCTCAAAACAAAAAAAAACTAGCATTTCGTGTCCCGTTTTTGTTAACCTGTACATCTGAACGTAAAGGGCAAAATAATGGAGAACGGATGCGGGGTATATTGTTCTGCGACTTACTTAACTTTCAGTCTTTTAACTTTTTGGATTGGATGGTGCCTTGTGCAGGTTCGAGCGGGAACGAACGTGTCCATTGTGTAGGGCTTTAGTTAAACCTGCCGATCTCAGGTCGTTTGGCGATGGATCAACAAGTCTGTTTTTCCAGGTTTTCTAAGCCATTTACTTCAAGCCCCTCCTCAGAGAGGTTGTGTGGTTTGAAGAGCTATAAAGCCAGCCATAGCATTTTTTTACCTACACAAAATGTACATCTAACTATTACTGTGTAGCTGTTACCCTGGAGAAAGCAAAGACGGGAGAGAGTGAAACCATCTGCTTGCTGCTGCTCACAAGGTGTACTCGGACAGGCGAATTCGAAATCGACATTTATACGTAATAGGAGTCCTTCTTGTGCTACAGAGGAGGACGATCGATGTTCGAGAGGAGTTTAACCGTATATGCAAATTTTATGAATTGCGAGTCTGAGTGTAAATTTAATACCATAGCCAGTTGCTGTGTTGATTTTTAATTTAGTCCATAAAAGGACAATGTTTTGGACTCTTAGAAAGTGTTACCCATACAGAATGTGAACATATTTTGGCTCCAGTTTGCTTGTGGATTTGAAAAAGAAAGGTATTATGAATTTTTACAATTGGA

mRNA sequence

CTCAACTCAATAAATTTCAAAACATTTTTTCCATTTCTCTTCATTTTTCTGGCTTGTATTCCACGAATGATCGTCAACAACGTATAGATTGTAATAGAAATAAAGGTATCAAATTCAAGCCTGTCTGAAATTACGATCAGGATTAGATTATCATCATATTGGAGAGAGCTGACCTTCTTCCCTTTGCCTTTTTCCCCTTTCTCTCTGGTTCGCTCTCTTGCCCTTCTTCCCTCGAGCTTCATAGGGCTTAAATTTCCGCCATTTTTGCATATCATCATCGCCATCGAAACCCCATCAAAGCTTTTTCCATCTTTTTCCCCTTTACCCTTCTTTTACTTCCACCATTTTCGTCCATCTATCCAATCAAACCCTACCCCTCTTCACCCTTTTTGTTGATTCGTTGGTTTCCTTCACTTTTCAATCCGATCATCGCGACCCAGTTGCTCGATTTGCTGATCGAGTCTAGTTTTTGTGTTCTTGTTGTAGCTAGAAAGTACTGTAGATTGGATTTTCTTATCTGGGTTTTTGCCATGTCGTGATTTTCTTTATCTGAGGTCCTCCACGGAGTCTCGTTTGCGGAGAAGGTAATCGAGTTCTGTTTCTTTTACTGGTTCTTGTTAACTTTTTCCTGTTTTTCTTGTTTTTCTTGCCCCTTTTCCTGTGATTTTAGCTTCATTGTCTTTAGCTTGCTTCTTTTACACGGAAATTTGTCTTCCTTCTTTATGTTGTGGGCAATTTTTTTCTCTGTTGTTGCAATGGTTATGATGGATATTATGGCGATTAGGGTTAGGCCATTCACCCGAATGGAAGCGTCTGGTAGCGACCCCGACTCTCATAGAGCTGCTTCCACCAGTGGTAGTTCGAGAAGGTTTGGAATGTTAGCTGCCTCGAATATAATTCAGGCTCCGCTTTCCGCACTGTTAGAGTATTCGGGTCTTCTTCGTGGCCGCCCAAGTCATCAAGAATCCGAGGCATTGATAAGTGCACGACTGCCTTCGGGATTTCGAGACCATCTTCGCAGCCAGATTGAAGAATCTTCTGGTGCTGCGAACGATGGAGAGGTTTCGATTAGGATAATTGGGGCAGGGGAGCCAGAACATGGTAGGGATGGTGCTGGACTGGTAGTTGGGCAAGCGAGGGAAGTCAGCGGTCAGAATGCGGTGTCTTCGCAGTCTGTTTCGGGGTTGGCATCGTCGGAGCTTAGCCAGGGAGACCCTACTACTGAACGTGGTGCAAGAGAGGGCATTCCTCAACCGATTAATGCAGGTGCTGATGGAGATACCTCGGAGGCAGCTGGGGGAAATAGCAGGGATTCTTCTTACCAAAGGTATGATATTCAACAGGCTGCTCGGGGGATTGAGCAGATTCTCCCATTTAGTTTTCTTCTATTGGTGGTCTTCATTCGACAGCATTTGCAAGGCTTCTTTGTGACAATTTGGATTGCTGCTTTCATGTACAAGTCAAATGATATTTTGCGAAAACAAACAGCTTTGAAGGGAGAGAGAAAAATCTCTGTTTTAGTTGGCATTTCTCTTGCATTCACCATTCATGTCATTGGTGTCTACTGGTGGTATCAGAATGATGACCTTTTATATCCGTTGATCATGCTTCCTCCCAGAGCAATACCTCCTTTTTGGCATGCTATTTTCATCATCATGGTGAATGACACTTTGGTTCGTCAGGCAGTGATGGTGGTCAAGTGTATTCTATTGATGTATTACAAGAACACCAGAGGCCGCAATTATCGTAAACAGGGTCAAATGCTAACTTTAGTCGAATATCTGCTACTACTGTACCGTGCTTTGTTGCCTACTCCCGTCTGGTATCGTTTCTTTTTGAACAAAGAGTATGGGAGTCTATTTTCGTCACTATTGACAGGACTGTACTTAACTTTCAAACTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCCTTGAAAGCGCTGTCTCGTAAAGAGGTGCATTATGGGGCATATGCAACGTCAGAGCAGGTCAGTGCAGCTGGTGATTTGTGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCCTACTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAGTGGTTCGAGCGGGAACGAACGTGTCCATTGTGTAGGGCTTTAGTTAAACCTGCCGATCTCAGGTCGTTTGGCGATGGATCAACAAGTCTGTTTTTCCAGGTTTTCTAAGCCATTTACTTCAAGCCCCTCCTCAGAGAGGTTGTGTGGTTTGAAGAGCTATAAAGCCAGCCATAGCATTTTTTTACCTACACAAAATGTACATCTAACTATTACTGTGTAGCTGTTACCCTGGAGAAAGCAAAGACGGGAGAGAGTGAAACCATCTGCTTGCTGCTGCTCACAAGGTGTACTCGGACAGGCGAATTCGAAATCGACATTTATACGTAATAGGAGTCCTTCTTGTGCTACAGAGGAGGACGATCGATGTTCGAGAGGAGTTTAACCGTATATGCAAATTTTATGAATTGCGAGTCTGAGTGTAAATTTAATACCATAGCCAGTTGCTGTGTTGATTTTTAATTTAGTCCATAAAAGGACAATGTTTTGGACTCTTAGAAAGTGTTACCCATACAGAATGTGAACATATTTTGGCTCCAGTTTGCTTGTGGATTTGAAAAAGAAAGGTATTATGAATTTTTACAATTGGA

Coding sequence (CDS)

ATGTTGTGGGCAATTTTTTTCTCTGTTGTTGCAATGGTTATGATGGATATTATGGCGATTAGGGTTAGGCCATTCACCCGAATGGAAGCGTCTGGTAGCGACCCCGACTCTCATAGAGCTGCTTCCACCAGTGGTAGTTCGAGAAGGTTTGGAATGTTAGCTGCCTCGAATATAATTCAGGCTCCGCTTTCCGCACTGTTAGAGTATTCGGGTCTTCTTCGTGGCCGCCCAAGTCATCAAGAATCCGAGGCATTGATAAGTGCACGACTGCCTTCGGGATTTCGAGACCATCTTCGCAGCCAGATTGAAGAATCTTCTGGTGCTGCGAACGATGGAGAGGTTTCGATTAGGATAATTGGGGCAGGGGAGCCAGAACATGGTAGGGATGGTGCTGGACTGGTAGTTGGGCAAGCGAGGGAAGTCAGCGGTCAGAATGCGGTGTCTTCGCAGTCTGTTTCGGGGTTGGCATCGTCGGAGCTTAGCCAGGGAGACCCTACTACTGAACGTGGTGCAAGAGAGGGCATTCCTCAACCGATTAATGCAGGTGCTGATGGAGATACCTCGGAGGCAGCTGGGGGAAATAGCAGGGATTCTTCTTACCAAAGGTATGATATTCAACAGGCTGCTCGGGGGATTGAGCAGATTCTCCCATTTAGTTTTCTTCTATTGGTGGTCTTCATTCGACAGCATTTGCAAGGCTTCTTTGTGACAATTTGGATTGCTGCTTTCATGTACAAGTCAAATGATATTTTGCGAAAACAAACAGCTTTGAAGGGAGAGAGAAAAATCTCTGTTTTAGTTGGCATTTCTCTTGCATTCACCATTCATGTCATTGGTGTCTACTGGTGGTATCAGAATGATGACCTTTTATATCCGTTGATCATGCTTCCTCCCAGAGCAATACCTCCTTTTTGGCATGCTATTTTCATCATCATGGTGAATGACACTTTGGTTCGTCAGGCAGTGATGGTGGTCAAGTGTATTCTATTGATGTATTACAAGAACACCAGAGGCCGCAATTATCGTAAACAGGGTCAAATGCTAACTTTAGTCGAATATCTGCTACTACTGTACCGTGCTTTGTTGCCTACTCCCGTCTGGTATCGTTTCTTTTTGAACAAAGAGTATGGGAGTCTATTTTCGTCACTATTGACAGGACTGTACTTAACTTTCAAACTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCCTTGAAAGCGCTGTCTCGTAAAGAGGTGCATTATGGGGCATATGCAACGTCAGAGCAGGTCAGTGCAGCTGGTGATTTGTGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCCTACTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAGTGGTTCGAGCGGGAACGAACGTGTCCATTGTGTAGGGCTTTAGTTAAACCTGCCGATCTCAGGTCGTTTGGCGATGGATCAACAAGTCTGTTTTTCCAGGTTTTCTAA

Protein sequence

MLWAIFFSVVAMVMMDIMAIRVRPFTRMEASGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALISARLPSGFRDHLRSQIEESSGAANDGEVSIRIIGAGEPEHGRDGAGLVVGQAREVSGQNAVSSQSVSGLASSELSQGDPTTERGAREGIPQPINAGADGDTSEAAGGNSRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCILLMYYKNTRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF

Homology

[Close]

BLAST of Lcy04g008000 vs. ExPASy Swiss-Prot
Match: Q96EX2 (RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RNFT2 PE=2 SV=2)

HSP 1 Score: 152.1 bits (383), Expect = 1.6e-35
Identity = 91/286 (31.82%), Postives = 158/286 (55.24%), Query Frame = 0


Query: 212 IEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVGISL 271
           +++ LPF  +LL     QH  G  V I +A+    +N  LR+Q +LK +R + V++ I  
Sbjct: 163 LQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILA 222

Query: 272 AFTIHVIGVYWWYQNDDLLYPLIMLPPR-AIPPFWHAIFIIMVNDTLVRQAVMVVKCILL 331
               + + V + + +  L   LI L P   +  F+  ++I+ + D +++   + +KC+++
Sbjct: 223 FLAGNTLYVLYTFSSQQLYNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIV 282

Query: 332 MYYKNTRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLF--SSLLTGLY 391
              K       + +G+   ++E L  L+R+L+P  +WY++ +  +  + +    +L  LY
Sbjct: 283 ALPKIILA--VKSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLY 342

Query: 392 LTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRC 451
              K   +  +V     ALK L   + +YG  AT +Q + AGD+CAICQ +   P++L C
Sbjct: 343 SLCKSFDICGRVGGVRKALKLLCTSQ-NYGVRATGQQCTEAGDICAICQAEFREPLILLC 402

Query: 452 KHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 495
           +H+FCE+C+  W +RERTCPLCR+ V    LR + DG+TS  FQV+
Sbjct: 403 QHVFCEECLCLWLDRERTCPLCRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]

BLAST of Lcy04g008000 vs. ExPASy Swiss-Prot
Match: Q5RAG4 (RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii OX=9601 GN=RNFT2 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.9e-34
Identity = 90/286 (31.47%), Postives = 156/286 (54.55%), Query Frame = 0


Query: 212 IEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVGISL 271
           +++ LPF  +LL     QH  G  V I +A+    +N  LR+Q +LK +R + V++ I  
Sbjct: 163 LQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILA 222

Query: 272 AFTIHVIGVYWWYQNDDLLYPLIMLPPR-AIPPFWHAIFIIMVNDTLVRQAVMVVKCILL 331
               + + V + + +  L   LI L P      F+  ++I+ + D +++   + +KC+++
Sbjct: 223 FLAGNTLYVLYTFSSQQLYNSLIFLKPNLETLDFFDLLWIVGIADFVLKYITIALKCLIV 282

Query: 332 MYYKNTRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLF--SSLLTGLY 391
              K       + +G+   ++E L  L+R+L+P  +WY++ +  +  + +    +L  LY
Sbjct: 283 ALPKIILA--VKSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLY 342

Query: 392 LTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRC 451
              K   +  +V     ALK L   + +YG  AT +Q + AGD+CAICQ +   P++L C
Sbjct: 343 SLCKSFDICGRVGGVRKALKLLCTSQ-NYGVRATGQQCTEAGDICAICQAEFREPLILLC 402

Query: 452 KHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 495
           +H+FCE+C+  W +RERTCPL R+ V    LR + DG+TS  FQV+
Sbjct: 403 QHVFCEECLCLWLDRERTCPLSRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]

BLAST of Lcy04g008000 vs. ExPASy Swiss-Prot
Match: Q5M7Z0 (E3 ubiquitin-protein ligase RNFT1 OS=Homo sapiens OX=9606 GN=RNFT1 PE=1 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 4.8e-32
Identity = 96/317 (30.28%), Postives = 164/317 (51.74%), Query Frame = 0


Query: 186 DTSEAAGGNSRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTI-WIAAFM 245
           D + A  G+   SS+  +  +   + +++ LP+  +L V  + QH+ G  + I  +  FM
Sbjct: 127 DDTAAESGDHGSSSFSEF--RYLFKWLQKSLPYILILSVKLVMQHITGISLGIGLLTTFM 186

Query: 246 YKSNDILRKQTALKGERKISVLVGISLAFTI-HVIGVYWWYQNDDLLYPLIMLPPRAIP- 305
           Y +  I+  Q  L+ ER   +     L F     + +Y+ + +  L Y LI L P     
Sbjct: 187 YANKSIV-NQVFLR-ERSSKIQCAWLLVFLAGSSVLLYYTFHSQSLYYSLIFLNPTLDHL 246

Query: 306 PFWHAIFIIMVNDTLVRQAVMVVKCILLMYYKNTRGRNYRKQGQMLTLVEYLLLLYRALL 365
            FW   +I+ + D +++   M +KC++L+         ++ +G    L+E L   YR  +
Sbjct: 247 SFWEVFWIVGITDFILKFFFMGLKCLILLVPSFI--MPFKSKGYWYMLLEELCQYYRTFV 306

Query: 366 PTPVWYRFFLN-KEYGSL----FSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHY 425
           P PVW+R+ ++  E+G++       LL  LYL  KL      +++F   L+ +   +  Y
Sbjct: 307 PIPVWFRYLISYGEFGNVTRWSLGILLALLYLILKLLEFFGHLRTFRQVLR-IFFTQPSY 366

Query: 426 GAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPA 485
           G  A+  Q S   D+C+ICQ +   PILL C+HIFCE+C++ WF RE+TCPLCR ++   
Sbjct: 367 GVAASKRQCSDVDDICSICQAEFQKPILLICQHIFCEECMTLWFNREKTCPLCRTVISD- 426

Query: 486 DLRSFGDGSTSLFFQVF 495
            +  + DG+TS   Q++
Sbjct: 427 HINKWKDGATSSHLQIY 435

[Close]

BLAST of Lcy04g008000 vs. ExPASy Swiss-Prot
Match: Q3UF64 (RING finger and transmembrane domain-containing protein 2 OS=Mus musculus OX=10090 GN=Rnft2 PE=2 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 1.1e-31
Identity = 107/379 (28.23%), Postives = 182/379 (48.02%), Query Frame = 0


Query: 131 AGLVVGQAREVSGQNAVSSQSVSGLASSELSQGDPTTERGAREGIPQPINAGADGDTSEA 190
           AGLV+G      G   +   +    A    ++G     R A        + G  G   + 
Sbjct: 74  AGLVLGSTAG-GGDVFIPMPATRDEAGGRSAEGSTYHHRQAHHHFHHGAHRG--GSLLQH 133

Query: 191 AGGNSRDSSYQRYDIQQAARG------------IEQILPFSFLLLVVFIRQHLQGFFVTI 250
            GG+ R  S +  D Q                 +++ LPF  +LL     QH  G  V I
Sbjct: 134 VGGDHRGHSEEGVDEQPGTPAPALSELKAVISWLQKGLPFILILLAKLCFQHKLGIAVCI 193

Query: 251 WIAAFMYKSNDILRKQTALKGERKISVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPP 310
            +A+    +N  LR+Q +LK +R + V++ I      + + V + + +  L   LI L P
Sbjct: 194 GMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTMYVLYTFSSQQLYSSLIFLKP 253

Query: 311 R-AIPPFWHAIFIIMVNDTLVRQAVMVVKCILLMYYKNTRGRNYRKQGQMLTLVEYLLLL 370
                 F+  ++I+ + D +++   + +KC+++   K       + +G+   ++E L  L
Sbjct: 254 NLETLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILA--VKSKGKFYLVIEELSQL 313

Query: 371 YRALLPTPVWYRFFLNKEYGSLF--SSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEV 430
           +R+L+P  +WY++ +  +  + +    +L  LY   K   +  +V     ALK L   + 
Sbjct: 314 FRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGLRKALKLLCTSQ- 373

Query: 431 HYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVK 490
           +YG  AT +Q + AG +CAICQ +   P++L C+H+FCE+C+  W +RERTCPLCR+ V 
Sbjct: 374 NYGVRATGQQCTEAGAVCAICQAEFRDPMILLCQHVFCEECLCLWLDRERTCPLCRS-VA 433

Query: 491 PADLRSFGDGSTSLFFQVF 495
              LR + DG+TS   QV+
Sbjct: 434 VDTLRCWKDGATSAHLQVY 445

[Close]

BLAST of Lcy04g008000 vs. ExPASy Swiss-Prot
Match: Q9DCN7 (E3 ubiquitin-protein ligase RNFT1 OS=Mus musculus OX=10090 GN=Rnft1 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 5.9e-30
Identity = 88/291 (30.24%), Postives = 151/291 (51.89%), Query Frame = 0


Query: 212 IEQILPFSFLLLVVFIRQHLQGFFVTI-WIAAFMYKSNDILRKQTALKGERKISVLVGIS 271
           +++ LP+  +L +  + QH+ G  + I  +  FMY +  I+  Q  L+ ER   +     
Sbjct: 111 LQKSLPYILILGIKLVMQHITGISLGIGLLTTFMYANKSIV-NQVFLR-ERSSKLRCAWL 170

Query: 272 LAFTI-HVIGVYWWYQNDDLLYPLIMLPPRAIP-PFWHAIFIIMVNDTLVRQAVMVVKCI 331
           L F     + +Y+ + +  L Y LI L P      FW  ++I+ + D +++   M +KC+
Sbjct: 171 LVFLAGSSVLLYYTFHSQSLHYSLIFLNPTLEQLSFWEVLWIVGITDFILKFFFMGLKCL 230

Query: 332 LLMYYKNTRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLN-KEYGSL----FSSL 391
           +L+         ++ +G    L+E L   YR  +P PVW+R+ ++  E+G++       L
Sbjct: 231 ILLVPSFI--MPFKSKGYWYMLLEELCQYYRIFVPIPVWFRYLISYGEFGNVTTWSLGIL 290

Query: 392 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 451
           L  LYL  KL      +++F   L+    +   YG  A+  Q S    +C ICQ +   P
Sbjct: 291 LALLYLILKLLDFFGHLRTFRQVLRVFFTRP-SYGVPASKRQCSDMDGICTICQAEFQKP 350

Query: 452 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 495
           +LL C+HIFCE+C++ WF RE+TCPLCR ++    +  + DG+TS   Q++
Sbjct: 351 VLLFCQHIFCEECITLWFNREKTCPLCRTVISEC-INKWKDGATSSHLQMY 395

[Close]

BLAST of Lcy04g008000 vs. ExPASy TrEMBL
Match: A0A6J1DPQ0 (RING finger and transmembrane domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111023167 PE=4 SV=1)

HSP 1 Score: 876.3 bits (2263), Expect = 5.9e-251
Identity = 451/467 (96.57%), Postives = 457/467 (97.86%), Query Frame = 0


Query: 28  MEASGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 87
           MEASGSDPD+HRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS
Sbjct: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60

Query: 88  ARLPSGFRDHLRSQIEESSGAANDGEVSIRIIGAGEPEHGRDGAGLVVGQAREVSGQNAV 147
           ARLPSGFRDH+RSQIEESSG+ NDGEVSIRIIGAGE EHGRDGAGLVVGQAREV GQNAV
Sbjct: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120

Query: 148 SSQSVSGLASSELSQGDPTTERGAREGIPQPINAGADGDTSEAAGGNSRDSSYQRYDIQQ 207
           SSQSVSGLA SELSQGDP  ERGAREGIPQPIN GADGD  EAAGGN RDSSYQRYDIQQ
Sbjct: 121 SSQSVSGLA-SELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRYDIQQ 180

Query: 208 AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV 267
           AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV
Sbjct: 181 AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV 240

Query: 268 GISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKC 327
           GISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKC
Sbjct: 241 GISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKC 300

Query: 328 ILLMYYKNTRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL 387
           +LLMYYKN+RGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL
Sbjct: 301 VLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL 360

Query: 388 YLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLR 447
           YLTFKLTSVVEKVQSFFAAL+ALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLR
Sbjct: 361 YLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLR 420

Query: 448 CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 495
           CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 466

[Close]

BLAST of Lcy04g008000 vs. ExPASy TrEMBL
Match: A0A0A0L088 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337310 PE=4 SV=1)

HSP 1 Score: 866.7 bits (2238), Expect = 4.7e-248
Identity = 450/471 (95.54%), Postives = 455/471 (96.60%), Query Frame = 0


Query: 28  MEASGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 87
           ME SGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGR SHQESEALIS
Sbjct: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60

Query: 88  ARLPSGFRDHLRSQIEESSGAANDGEVSIRIIGAGEPEHGRDGAGLVVGQAREVSGQNAV 147
           ARLPSGFRDHLRS IEESSGA NDGEVSIRIIGAGEPEHGRDGAGLVVGQAR+VSGQNAV
Sbjct: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120

Query: 148 SSQSVSGLAS----SELSQGDPTTERGAREGIPQPINAGADGDTSEAAGGNSRDSSYQRY 207
           S QSVSGLAS    SELSQG+   ERGAREGIP+ INAGADGD SEAAGGNSRDSSYQRY
Sbjct: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180

Query: 208 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 267
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 268 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 327
           SVLV ISLAFTIHVIGVYWWYQNDDLLYPLIM PPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 328 VVKCILLMYYKNTRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 387
           VVKC+LLMYYKN+RGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 388 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 447
           LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 448 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 495
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 471

[Close]

BLAST of Lcy04g008000 vs. ExPASy TrEMBL
Match: A0A1S3CIV8 (RING finger and transmembrane domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103501489 PE=4 SV=1)

HSP 1 Score: 865.1 bits (2234), Expect = 1.4e-247
Identity = 449/471 (95.33%), Postives = 454/471 (96.39%), Query Frame = 0


Query: 28  MEASGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 87
           ME SGSDPDSHR ASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGR SHQESEALIS
Sbjct: 1   MEGSGSDPDSHRPASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60

Query: 88  ARLPSGFRDHLRSQIEESSGAANDGEVSIRIIGAGEPEHGRDGAGLVVGQAREVSGQNAV 147
           ARLPSGFRDHLRS IEESSGA NDGEVSIRIIGAGEPEHGRDGAGLVVGQAR+VSGQNAV
Sbjct: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120

Query: 148 SSQSVSGLAS----SELSQGDPTTERGAREGIPQPINAGADGDTSEAAGGNSRDSSYQRY 207
           S QSVSGLAS    SELSQG+   ERGAREGIP+ INAGADGDTSE AGGNSRDSSYQRY
Sbjct: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDTSEVAGGNSRDSSYQRY 180

Query: 208 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 267
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 268 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 327
           SVLV ISLAFTIHVIGVYWWYQNDDLLYPLIM PPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 328 VVKCILLMYYKNTRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 387
           VVKC+LLMYYKN+RGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 388 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 447
           LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 448 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 495
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 471

[Close]

BLAST of Lcy04g008000 vs. ExPASy TrEMBL
Match: A0A6J1IS82 (E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita maxima OX=3661 GN=LOC111478227 PE=4 SV=1)

HSP 1 Score: 852.8 bits (2202), Expect = 7.0e-244
Identity = 442/467 (94.65%), Postives = 449/467 (96.15%), Query Frame = 0


Query: 28  MEASGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 87
           ME S  DPDSHRAASTSGSSRRFG+LAASNIIQAPLSALLEYSGLLRGRPSHQE EALIS
Sbjct: 1   MEGSSIDPDSHRAASTSGSSRRFGLLAASNIIQAPLSALLEYSGLLRGRPSHQEPEALIS 60

Query: 88  ARLPSGFRDHLRSQIEESSGAANDGEVSIRIIGAGEPEHGRDGAGLVVGQAREVSGQNAV 147
           ARLPS FR HLRSQI+ESS A+NDGEVSIRIIGAGEPEHGRDGAGLVVGQARE SGQNA 
Sbjct: 61  ARLPSAFRGHLRSQIDESSSASNDGEVSIRIIGAGEPEHGRDGAGLVVGQAREFSGQNAA 120

Query: 148 SSQSVSGLASSELSQGDPTTERGAREGIPQPINAGADGDTSEAAGGNSRDSSYQRYDIQQ 207
           SSQSV+   +SELSQGD  TER AREGIPQ INAGADGD SEAAGGNSRDSSYQRYDIQQ
Sbjct: 121 SSQSVT--LASELSQGDSATERSAREGIPQSINAGADGDASEAAGGNSRDSSYQRYDIQQ 180

Query: 208 AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV 267
           AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV
Sbjct: 181 AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV 240

Query: 268 GISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKC 327
           GISLAFTIHVIGVYWWYQND LLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKC
Sbjct: 241 GISLAFTIHVIGVYWWYQNDGLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKC 300

Query: 328 ILLMYYKNTRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL 387
           ILLMYYKN+RGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL
Sbjct: 301 ILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL 360

Query: 388 YLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLR 447
           YLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQV+AAGDLCAICQEKMHAPILLR
Sbjct: 361 YLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVNAAGDLCAICQEKMHAPILLR 420

Query: 448 CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 495
           CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 465

[Close]

BLAST of Lcy04g008000 vs. ExPASy TrEMBL
Match: A0A6J1EDR3 (E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita moschata OX=3662 GN=LOC111432304 PE=4 SV=1)

HSP 1 Score: 849.7 bits (2194), Expect = 5.9e-243
Identity = 437/467 (93.58%), Postives = 443/467 (94.86%), Query Frame = 0


Query: 28  MEASGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 87
           MEASGSDPDSHR ASTSGSSRRFGMLAASN+IQAPLSALLEYSGLLRGRPSHQESEALIS
Sbjct: 1   MEASGSDPDSHRTASTSGSSRRFGMLAASNMIQAPLSALLEYSGLLRGRPSHQESEALIS 60

Query: 88  ARLPSGFRDHLRSQIEESSGAANDGEVSIRIIGAGEPEHGRDGAGLVVGQAREVSGQNAV 147
           ARLPSG RDHLRSQIEESSG  NDGEVSIRIIGAGE EH RD AGLVVGQ REV GQN+ 
Sbjct: 61  ARLPSGLRDHLRSQIEESSGVTNDGEVSIRIIGAGEQEHVRDSAGLVVGQVREVGGQNSA 120

Query: 148 SSQSVSGLASSELSQGDPTTERGAREGIPQPINAGADGDTSEAAGGNSRDSSYQRYDIQQ 207
           S QSVSGLASSE SQGD  T RG  EGIPQP+N G DGD SEAAGGNSRDSSYQRYDIQQ
Sbjct: 121 SLQSVSGLASSEFSQGDAATGRGVIEGIPQPVNEGPDGDASEAAGGNSRDSSYQRYDIQQ 180

Query: 208 AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV 267
           AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV
Sbjct: 181 AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV 240

Query: 268 GISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKC 327
            ISLAFT H+IGVYWWYQ DDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQA MVVKC
Sbjct: 241 AISLAFTFHIIGVYWWYQKDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAGMVVKC 300

Query: 328 ILLMYYKNTRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL 387
           +LLMYYKN+RGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL
Sbjct: 301 VLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL 360

Query: 388 YLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLR 447
           YLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLR
Sbjct: 361 YLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLR 420

Query: 448 CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 495
           CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467

[Close]

BLAST of Lcy04g008000 vs. NCBI nr
Match: XP_031740196.1 (RING finger and transmembrane domain-containing protein 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 883.6 bits (2282), Expect = 7.7e-253
Identity = 459/481 (95.43%), Postives = 464/481 (96.47%), Query Frame = 0


Query: 18  MAIRVRPFTRMEASGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRP 77
           M IRVRPFTRME SGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGR 
Sbjct: 1   MMIRVRPFTRMEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQ 60

Query: 78  SHQESEALISARLPSGFRDHLRSQIEESSGAANDGEVSIRIIGAGEPEHGRDGAGLVVGQ 137
           SHQESEALISARLPSGFRDHLRS IEESSGA NDGEVSIRIIGAGEPEHGRDGAGLVVGQ
Sbjct: 61  SHQESEALISARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQ 120

Query: 138 AREVSGQNAVSSQSVSGLAS----SELSQGDPTTERGAREGIPQPINAGADGDTSEAAGG 197
           AR+VSGQNAVS QSVSGLAS    SELSQG+   ERGAREGIP+ INAGADGD SEAAGG
Sbjct: 121 ARDVSGQNAVSLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGG 180

Query: 198 NSRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRK 257
           NSRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRK
Sbjct: 181 NSRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRK 240

Query: 258 QTALKGERKISVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMV 317
           QTALKGERKISVLV ISLAFTIHVIGVYWWYQNDDLLYPLIM PPRAIPPFWHAIFIIMV
Sbjct: 241 QTALKGERKISVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMV 300

Query: 318 NDTLVRQAVMVVKCILLMYYKNTRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLN 377
           NDTLVRQAVMVVKC+LLMYYKN+RGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLN
Sbjct: 301 NDTLVRQAVMVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLN 360

Query: 378 KEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLC 437
           KEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLC
Sbjct: 361 KEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLC 420

Query: 438 AICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQV 495
           AICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQV
Sbjct: 421 AICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQV 480

[Close]

BLAST of Lcy04g008000 vs. NCBI nr
Match: KAG7027516.1 (RING finger and transmembrane domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 882.1 bits (2278), Expect = 2.2e-252
Identity = 457/494 (92.51%), Postives = 465/494 (94.13%), Query Frame = 0


Query: 1   MLWAIFFSVVAMVMMDIMAIRVRPFTRMEASGSDPDSHRAASTSGSSRRFGMLAASNIIQ 60
           MLW+   SVVAMV+MDIMAIRVRPFTRMEASGSDPDSHR ASTSGSSRRFGMLAASN+IQ
Sbjct: 1   MLWSKSLSVVAMVVMDIMAIRVRPFTRMEASGSDPDSHRTASTSGSSRRFGMLAASNMIQ 60

Query: 61  APLSALLEYSGLLRGRPSHQESEALISARLPSGFRDHLRSQIEESSGAANDGEVSIRIIG 120
           APLSALLEYSGLLRGRPSHQESEALISARLPSG RDHLRSQIEESSG  NDGEVSIRIIG
Sbjct: 61  APLSALLEYSGLLRGRPSHQESEALISARLPSGLRDHLRSQIEESSGVTNDGEVSIRIIG 120

Query: 121 AGEPEHGRDGAGLVVGQAREVSGQNAVSSQSVSGLASSELSQGDPTTERGAREGIPQPIN 180
           AGE EH RD AGL VGQ REV  QN+ S QSVSGLASSE SQGD  T RGA EGIPQP+N
Sbjct: 121 AGEQEHVRDSAGLAVGQVREVGSQNSASLQSVSGLASSEFSQGDAATGRGAIEGIPQPVN 180

Query: 181 AGADGDTSEAAGGNSRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWI 240
            G DGD SEAAGGN RDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWI
Sbjct: 181 EGPDGDASEAAGGNRRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWI 240

Query: 241 AAFMYKSNDILRKQTALKGERKISVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRA 300
           AAFMYKSNDILRKQTALKGERKISVLV ISLAFT H+IGVYWWYQ DDLLYPLIMLPPRA
Sbjct: 241 AAFMYKSNDILRKQTALKGERKISVLVAISLAFTFHIIGVYWWYQKDDLLYPLIMLPPRA 300

Query: 301 IPPFWHAIFIIMVNDTLVRQAVMVVKCILLMYYKNTRGRNYRKQGQMLTLVEYLLLLYRA 360
           IPPFWHAIFIIMVNDTLVRQA MVVKC+LLMYYKN+RGRNYRKQGQMLTLVEYLLLLYRA
Sbjct: 301 IPPFWHAIFIIMVNDTLVRQAGMVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRA 360

Query: 361 LLPTPVWYRFFLNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAY 420
           LLPTPVWYRFFLNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAY
Sbjct: 361 LLPTPVWYRFFLNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAY 420

Query: 421 ATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLR 480
           ATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLR
Sbjct: 421 ATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLR 480

Query: 481 SFGDGSTSLFFQVF 495
           SFGDGSTSLFFQVF
Sbjct: 481 SFGDGSTSLFFQVF 494

[Close]

BLAST of Lcy04g008000 vs. NCBI nr
Match: XP_022156230.1 (RING finger and transmembrane domain-containing protein 2 [Momordica charantia])

HSP 1 Score: 876.3 bits (2263), Expect = 1.2e-250
Identity = 451/467 (96.57%), Postives = 457/467 (97.86%), Query Frame = 0


Query: 28  MEASGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 87
           MEASGSDPD+HRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS
Sbjct: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60

Query: 88  ARLPSGFRDHLRSQIEESSGAANDGEVSIRIIGAGEPEHGRDGAGLVVGQAREVSGQNAV 147
           ARLPSGFRDH+RSQIEESSG+ NDGEVSIRIIGAGE EHGRDGAGLVVGQAREV GQNAV
Sbjct: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120

Query: 148 SSQSVSGLASSELSQGDPTTERGAREGIPQPINAGADGDTSEAAGGNSRDSSYQRYDIQQ 207
           SSQSVSGLA SELSQGDP  ERGAREGIPQPIN GADGD  EAAGGN RDSSYQRYDIQQ
Sbjct: 121 SSQSVSGLA-SELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRYDIQQ 180

Query: 208 AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV 267
           AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV
Sbjct: 181 AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV 240

Query: 268 GISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKC 327
           GISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKC
Sbjct: 241 GISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKC 300

Query: 328 ILLMYYKNTRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL 387
           +LLMYYKN+RGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL
Sbjct: 301 VLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL 360

Query: 388 YLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLR 447
           YLTFKLTSVVEKVQSFFAAL+ALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLR
Sbjct: 361 YLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLR 420

Query: 448 CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 495
           CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 466

[Close]

BLAST of Lcy04g008000 vs. NCBI nr
Match: XP_038881776.1 (RING finger and transmembrane domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 868.2 bits (2242), Expect = 3.3e-248
Identity = 453/471 (96.18%), Postives = 456/471 (96.82%), Query Frame = 0


Query: 28  MEASGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 87
           ME SGSDPDSHRAASTS SSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS
Sbjct: 1   MEGSGSDPDSHRAASTS-SSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60

Query: 88  ARLPSGFRDHLRSQIEESSGAANDGEVSIRIIGAGEPEHGRDGAGLVVGQAREVSGQNAV 147
           ARLPSGFRDHLRSQIEESSGA NDGEVSIRIIGAGEPEHGRDGAGLVVGQARE SGQN V
Sbjct: 61  ARLPSGFRDHLRSQIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQAREGSGQNTV 120

Query: 148 SSQSVSGLAS----SELSQGDPTTERGAREGIPQPINAGADGDTSEAAGGNSRDSSYQRY 207
           S QSVSGLAS    SELSQG+  TERGAREGIPQ INA ADGD SEAAGGNSRDSSYQRY
Sbjct: 121 SLQSVSGLASVTLASELSQGESATERGAREGIPQSINASADGDASEAAGGNSRDSSYQRY 180

Query: 208 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 267
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 268 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 327
           SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 328 VVKCILLMYYKNTRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 387
           VVKC+LLMYYKN+RGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 388 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 447
           LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 448 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 495
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 470

[Close]

BLAST of Lcy04g008000 vs. NCBI nr
Match: XP_004142726.1 (RING finger and transmembrane domain-containing protein 2 isoform X2 [Cucumis sativus] >KGN54474.1 hypothetical protein Csa_012295 [Cucumis sativus])

HSP 1 Score: 866.7 bits (2238), Expect = 9.7e-248
Identity = 450/471 (95.54%), Postives = 455/471 (96.60%), Query Frame = 0


Query: 28  MEASGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 87
           ME SGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGR SHQESEALIS
Sbjct: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60

Query: 88  ARLPSGFRDHLRSQIEESSGAANDGEVSIRIIGAGEPEHGRDGAGLVVGQAREVSGQNAV 147
           ARLPSGFRDHLRS IEESSGA NDGEVSIRIIGAGEPEHGRDGAGLVVGQAR+VSGQNAV
Sbjct: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120

Query: 148 SSQSVSGLAS----SELSQGDPTTERGAREGIPQPINAGADGDTSEAAGGNSRDSSYQRY 207
           S QSVSGLAS    SELSQG+   ERGAREGIP+ INAGADGD SEAAGGNSRDSSYQRY
Sbjct: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180

Query: 208 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 267
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 268 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 327
           SVLV ISLAFTIHVIGVYWWYQNDDLLYPLIM PPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 328 VVKCILLMYYKNTRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 387
           VVKC+LLMYYKN+RGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 388 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 447
           LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 448 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 495
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 471

[Close]

BLAST of Lcy04g008000 vs. TAIR 10
Match: AT5G01960.1 (RING/U-box superfamily protein )

HSP 1 Score: 600.9 bits (1548), Expect = 9.3e-172
Identity = 328/468 (70.09%), Postives = 365/468 (77.99%), Query Frame = 0


Query: 28  MEASGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPS-HQESEALI 87
           ME  G+  DS R     GS RR  +L+ASNIIQAP+S LLEYSGL R RPS   E+E L+
Sbjct: 1   METPGASHDSFR-----GSPRRNSILSASNIIQAPISTLLEYSGLFRARPSPSHEAETLV 60

Query: 88  SARLPSGFRDHLRSQIEESSGAANDGEVSIRIIGAGEPEHGRDGAGLVVGQAREVSGQNA 147
           S               ++SSG +N GEV+IRIIG  E +   D               NA
Sbjct: 61  S---------------DDSSGLSN-GEVAIRIIGNTEQDAETD--------------TNA 120

Query: 148 VSSQSVSGLASSELSQGDPTTERGAREGIPQPINAGADGDTSEAAGGNSRDSSYQRYDIQ 207
           +     S L  S  +Q DP    GA EG  Q     A GD + A    SRDS YQRYDIQ
Sbjct: 121 LREPGHSELLGSSATQVDPM--GGASEGASQ----AAPGDPA-AGDAASRDSPYQRYDIQ 180

Query: 208 QAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVL 267
           QAAR IEQILPFS LLLVVFIRQHLQGFFV IWIAA M+KSNDIL+KQTALKGER IS L
Sbjct: 181 QAARWIEQILPFSLLLLVVFIRQHLQGFFVAIWIAAVMFKSNDILKKQTALKGERHISAL 240

Query: 268 VGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVK 327
           +GIS+AFT HV+GVYWW++ DDLLYPLIMLPP++IPPFWHAIFII+VNDTLVRQA M+ K
Sbjct: 241 IGISVAFTAHVVGVYWWFRKDDLLYPLIMLPPKSIPPFWHAIFIIVVNDTLVRQASMIFK 300

Query: 328 CILLMYYKNTRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTG 387
           C LLMYYKN+RGRNYRKQGQ+LTLVEY +LLYR+LLPTPVWYRFFLNK+YGSLFSSL+TG
Sbjct: 301 CFLLMYYKNSRGRNYRKQGQLLTLVEYFMLLYRSLLPTPVWYRFFLNKDYGSLFSSLMTG 360

Query: 388 LYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILL 447
           LYLTFKLTSVVEKVQSFF ALKALSRKEVHYG+YAT+EQV+AAGDLCAICQEKMH PILL
Sbjct: 361 LYLTFKLTSVVEKVQSFFTALKALSRKEVHYGSYATTEQVNAAGDLCAICQEKMHTPILL 420

Query: 448 RCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 495
           RCKH+FCEDCVSEWFERERTCPLCRALVKPADL+SFGDGSTSLFFQ+F
Sbjct: 421 RCKHMFCEDCVSEWFERERTCPLCRALVKPADLKSFGDGSTSLFFQIF 426

[Close]

BLAST of Lcy04g008000 vs. TAIR 10
Match: AT1G65040.2 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 6.9e-10
Identity = 46/128 (35.94%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 353 YLLLLYRALLPTPVWYRFFLN--KEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKAL 412
           + L L R LL   ++  FFL     YG L   L+  LY TF+   +  +V  +    K  
Sbjct: 214 FYLELVRDLLHLSMYLCFFLMIFMNYG-LPLHLIRELYETFRNFKI--RVTDYLRYRKIT 273

Query: 413 SRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLC 472
           S     +   AT E++S+    C IC+E+M +   L C H+F   C+  W ER+ TCP C
Sbjct: 274 SNMNDRF-PDATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTC 333

Query: 473 RALVKPAD 479
           RALV PA+
Sbjct: 334 RALVVPAE 337

[Close]

BLAST of Lcy04g008000 vs. TAIR 10
Match: AT1G65040.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 6.9e-10
Identity = 46/128 (35.94%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 353 YLLLLYRALLPTPVWYRFFLN--KEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKAL 412
           + L L R LL   ++  FFL     YG L   L+  LY TF+   +  +V  +    K  
Sbjct: 35  FYLELVRDLLHLSMYLCFFLMIFMNYG-LPLHLIRELYETFRNFKI--RVTDYLRYRKIT 94

Query: 413 SRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLC 472
           S     +   AT E++S+    C IC+E+M +   L C H+F   C+  W ER+ TCP C
Sbjct: 95  SNMNDRF-PDATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTC 154

Query: 473 RALVKPAD 479
           RALV PA+
Sbjct: 155 RALVVPAE 158

[Close]

BLAST of Lcy04g008000 vs. TAIR 10
Match: AT1G65040.3 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 6.9e-10
Identity = 46/128 (35.94%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 353 YLLLLYRALLPTPVWYRFFLN--KEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKAL 412
           + L L R LL   ++  FFL     YG L   L+  LY TF+   +  +V  +    K  
Sbjct: 143 FYLELVRDLLHLSMYLCFFLMIFMNYG-LPLHLIRELYETFRNFKI--RVTDYLRYRKIT 202

Query: 413 SRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLC 472
           S     +   AT E++S+    C IC+E+M +   L C H+F   C+  W ER+ TCP C
Sbjct: 203 SNMNDRF-PDATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTC 262

Query: 473 RALVKPAD 479
           RALV PA+
Sbjct: 263 RALVVPAE 266

[Close]

BLAST of Lcy04g008000 vs. TAIR 10
Match: AT3G16090.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 4.5e-09
Identity = 44/128 (34.38%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 353 YLLLLYRALLPTPVWYRFF--LNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKAL 412
           + L L R LL   ++  FF  +   YG +   LL  LY TF+   +  +V  +    K  
Sbjct: 214 FYLELIRDLLHLSMYICFFFVIFMNYG-VPLHLLRELYETFRNFQI--RVSDYLRYRKIT 273

Query: 413 SRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLC 472
           S     +   AT E+++A+   C IC+E+M     L C H+F   C+  W ER++TCP C
Sbjct: 274 SNMNDRF-PDATPEELTASDATCIICREEMTNAKKLICGHLFHVHCLRSWLERQQTCPTC 333

Query: 473 RALVKPAD 479
           RALV P +
Sbjct: 334 RALVVPPE 337

The following BLAST results are available for this feature:

BLAST of Lcy04g008000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96EX2	1.6e-35	31.82	RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens OX=960...	[more]
Q5RAG4	3.9e-34	31.47	RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii OX=960...	[more]
Q5M7Z0	4.8e-32	30.28	E3 ubiquitin-protein ligase RNFT1 OS=Homo sapiens OX=9606 GN=RNFT1 PE=1 SV=2	[more]
Q3UF64	1.1e-31	28.23	RING finger and transmembrane domain-containing protein 2 OS=Mus musculus OX=100...	[more]
Q9DCN7	5.9e-30	30.24	E3 ubiquitin-protein ligase RNFT1 OS=Mus musculus OX=10090 GN=Rnft1 PE=2 SV=1	[more]

BLAST of Lcy04g008000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPQ0	5.9e-251	96.57	RING finger and transmembrane domain-containing protein 2 OS=Momordica charantia...	[more]
A0A0A0L088	4.7e-248	95.54	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337310 P...	[more]
A0A1S3CIV8	1.4e-247	95.33	RING finger and transmembrane domain-containing protein 2 OS=Cucumis melo OX=365...	[more]
A0A6J1IS82	7.0e-244	94.65	E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita maxima OX=3661 GN=LOC1114782...	[more]
A0A6J1EDR3	5.9e-243	93.58	E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of Lcy04g008000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740196.1	7.7e-253	95.43	RING finger and transmembrane domain-containing protein 2 isoform X1 [Cucumis sa...	[more]
KAG7027516.1	2.2e-252	92.51	RING finger and transmembrane domain-containing protein 2 [Cucurbita argyrosperm...	[more]
XP_022156230.1	1.2e-250	96.57	RING finger and transmembrane domain-containing protein 2 [Momordica charantia]	[more]
XP_038881776.1	3.3e-248	96.18	RING finger and transmembrane domain-containing protein 2 [Benincasa hispida]	[more]
XP_004142726.1	9.7e-248	95.54	RING finger and transmembrane domain-containing protein 2 isoform X2 [Cucumis sa...	[more]

BLAST of Lcy04g008000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01960.1	9.3e-172	70.09	RING/U-box superfamily protein	[more]
AT1G65040.2	6.9e-10	35.94	RING/U-box superfamily protein	[more]
AT1G65040.1	6.9e-10	35.94	RING/U-box superfamily protein	[more]
AT1G65040.3	6.9e-10	35.94	RING/U-box superfamily protein	[more]
AT3G16090.1	4.5e-09	34.38	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 433..470 e-value: 1.7E-7 score: 40.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 433..471 score: 13.595753
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 431..474 e-value: 3.1E-10 score: 39.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..198
None	No IPR available	PANTHER	PTHR15860:SF19	RING/U-BOX SUPERFAMILY PROTEIN	coord: 28..494
None	No IPR available	CDD	cd16532	RING-HC_RNFT1_like	coord: 432..471 e-value: 3.92369E-28 score: 103.903
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 428..476
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 408..481 e-value: 4.7E-18 score: 66.3
IPR044235	RING finger and transmembrane domain-containing protein 1/2	PANTHER	PTHR15860	UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN	coord: 28..494
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 448..457

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g008000.1	Lcy04g008000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:1904294	positive regulation of ERAD pathway
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity