Lcy04g007930 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g007930
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	LEA_2 domain-containing protein
Location	Chr04: 38640375 .. 38641868 (+)
RNA-Seq Expression	Lcy04g007930
Synteny	Lcy04g007930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCAGCATTTTTCGATCAAACCGAACATAGCTTAAGCTAGCTTAGTGGATAAGGTGTCAATTACTATCTCAAAAATCAATGGTTCAATCTCCACAGAAATGATCTAAAAAGACAATTATTGATACTTTTAAAACCATACGTACCAAATCAAAACTTTCTATAGTGACAAAATTTGAAATTAAAAAAAGAAAATCTCTCTAATAAAGATTTATCCTTTCAAGATGAAAAAAAGGGAAGAACCAAATTAAAGCAAAGGGAAAGCATTTTCTCCATCTACCTGTCTCCTACTCCAATTAATTTCAATTTAGTTGAGGGTTAGATCCCAATTCCAATGTGCACCATAAAACCACAATCTCAATTCTCTCACAAAATCCAAACCCCGCCATGGACGTCGCCTCCTCCTCCTCAGCCAAGGATCCCAAATCCACCCAATCCGCCGCCGCTGCCCGCTCCCGGCGACGCCGCAACACCTGCATCGGAGTCTCCGTCGCCGTCGTCGTCCTCCTCGTCGTCATAATCGTCATTTTAGCCTTCACAGTCTTCAAAGCCAAGCGCCCAATCACCGCCATCAACTCCGTAGCCCTAGCCGACCTCGACGTGTCGCTCAACATAGCCAGACTCGCCGTCGACATCAACGTCACTCTGATCGCCGACGTCTCAATCACGAACCCTAACAAGGTCGGATTCAGCTATTCGAACAGCACCGCGCTTCTCAATTACAGAGGCGAACTGGTCGGCGAGGCGCCGATTCCGGCCGGCCGGATCGATGCGGATCAGAGCAAGCGGATGAACATCACGCTGACGATCATGGCGGATCGGCTGCTGAGGTCGTCGACGGTGTTCTCCGACGTCGTCGCCGGATCGATGCCGCTGAATACGTACACGAGGATCTCAGGTAAGGTGAGGATTTTGGGGATTTTCAACATTCACGTTGTTTCGACAACGTCCTGTGATTTCACTCTGAATATATCGGAGAGGAAAATTGGAGATCAGCAGTGCGATTATCATACGAAGATCTAATTGATTGAGCTTCTTCTTCTTCTTCATTCGTAAATTATGAACAGATTTGTAGGTGGATTTAGGGCTAATTGATTGATTTGGTATTGTTACTATTTTTGAAGTGCTCTTTCCTCCGTGATTCTGATTCTTTGTTTGTTTTGTTTATGTTTTTGTTTTTGTTTTTCTCGTTAATTAACTTTAGTAGGAGAGGTGCTTGAAGATATTCTCCAATTTCCCATTTGTATACTCTAATTTAAATTAGGTTAAAAATCACTCTTGGTATCTAAATTTTTTTTTACAATATGTGGAGAGGGGGATTTAAACCACAGACCTTGTGGTTATCAGTACAATTTGTTGAGCTAAGCTCTTGTTGGCTTGGTATCTAGATTTTGATGAACTTTTGATTTGTAATGATTTAGTCTTGTAACAAGTTAGTTCCTATACTTTCAAATTTGTAACAATTTAGTTTTTGTACTTCCAAATTACAATTTAAT

mRNA sequence

TATCAGCATTTTTCGATCAAACCGAACATAGCTTAAGCTAGCTTAGTGGATAAGGTGTCAATTACTATCTCAAAAATCAATGGTTCAATCTCCACAGAAATGATCTAAAAAGACAATTATTGATACTTTTAAAACCATACGTACCAAATCAAAACTTTCTATAGTGACAAAATTTGAAATTAAAAAAAGAAAATCTCTCTAATAAAGATTTATCCTTTCAAGATGAAAAAAAGGGAAGAACCAAATTAAAGCAAAGGGAAAGCATTTTCTCCATCTACCTGTCTCCTACTCCAATTAATTTCAATTTAGTTGAGGGTTAGATCCCAATTCCAATGTGCACCATAAAACCACAATCTCAATTCTCTCACAAAATCCAAACCCCGCCATGGACGTCGCCTCCTCCTCCTCAGCCAAGGATCCCAAATCCACCCAATCCGCCGCCGCTGCCCGCTCCCGGCGACGCCGCAACACCTGCATCGGAGTCTCCGTCGCCGTCGTCGTCCTCCTCGTCGTCATAATCGTCATTTTAGCCTTCACAGTCTTCAAAGCCAAGCGCCCAATCACCGCCATCAACTCCGTAGCCCTAGCCGACCTCGACGTGTCGCTCAACATAGCCAGACTCGCCGTCGACATCAACGTCACTCTGATCGCCGACGTCTCAATCACGAACCCTAACAAGGTCGGATTCAGCTATTCGAACAGCACCGCGCTTCTCAATTACAGAGGCGAACTGGTCGGCGAGGCGCCGATTCCGGCCGGCCGGATCGATGCGGATCAGAGCAAGCGGATGAACATCACGCTGACGATCATGGCGGATCGGCTGCTGAGGTCGTCGACGGTGTTCTCCGACGTCGTCGCCGGATCGATGCCGCTGAATACGTACACGAGGATCTCAGGTAAGGTGAGGATTTTGGGGATTTTCAACATTCACGTTGTTTCGACAACGTCCTGTGATTTCACTCTGAATATATCGGAGAGGAAAATTGGAGATCAGCAGTGCGATTATCATACGAAGATCTAATTGATTGAGCTTCTTCTTCTTCTTCATTCGTAAATTATGAACAGATTTGTAGGTGGATTTAGGGCTAATTGATTGATTTGGTATTGTTACTATTTTTGAAGTGCTCTTTCCTCCGTGATTCTGATTCTTTGTTTGTTTTGTTTATGTTTTTGTTTTTGTTTTTCTCGTTAATTAACTTTAGTAGGAGAGGTGCTTGAAGATATTCTCCAATTTCCCATTTGTATACTCTAATTTAAATTAGGTTAAAAATCACTCTTGGTATCTAAATTTTTTTTTACAATATGTGGAGAGGGGGATTTAAACCACAGACCTTGTGGTTATCAGTACAATTTGTTGAGCTAAGCTCTTGTTGGCTTGGTATCTAGATTTTGATGAACTTTTGATTTGTAATGATTTAGTCTTGTAACAAGTTAGTTCCTATACTTTCAAATTTGTAACAATTTAGTTTTTGTACTTCCAAATTACAATTTAAT

Coding sequence (CDS)

ATGGACGTCGCCTCCTCCTCCTCAGCCAAGGATCCCAAATCCACCCAATCCGCCGCCGCTGCCCGCTCCCGGCGACGCCGCAACACCTGCATCGGAGTCTCCGTCGCCGTCGTCGTCCTCCTCGTCGTCATAATCGTCATTTTAGCCTTCACAGTCTTCAAAGCCAAGCGCCCAATCACCGCCATCAACTCCGTAGCCCTAGCCGACCTCGACGTGTCGCTCAACATAGCCAGACTCGCCGTCGACATCAACGTCACTCTGATCGCCGACGTCTCAATCACGAACCCTAACAAGGTCGGATTCAGCTATTCGAACAGCACCGCGCTTCTCAATTACAGAGGCGAACTGGTCGGCGAGGCGCCGATTCCGGCCGGCCGGATCGATGCGGATCAGAGCAAGCGGATGAACATCACGCTGACGATCATGGCGGATCGGCTGCTGAGGTCGTCGACGGTGTTCTCCGACGTCGTCGCCGGATCGATGCCGCTGAATACGTACACGAGGATCTCAGGTAAGGTGAGGATTTTGGGGATTTTCAACATTCACGTTGTTTCGACAACGTCCTGTGATTTCACTCTGAATATATCGGAGAGGAAAATTGGAGATCAGCAGTGCGATTATCATACGAAGATCTAA

Protein sequence

MDVASSSSAKDPKSTQSAAAARSRRRRNTCIGVSVAVVVLLVVIIVILAFTVFKAKRPITAINSVALADLDVSLNIARLAVDINVTLIADVSITNPNKVGFSYSNSTALLNYRGELVGEAPIPAGRIDADQSKRMNITLTIMADRLLRSSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFTLNISERKIGDQQCDYHTKI

Homology

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BLAST of Lcy04g007930 vs. ExPASy TrEMBL
Match: A0A1S3CJB5 (uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 9.8e-86
Identity = 172/216 (79.63%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MDVASSSSA--KDPKSTQS---AAAARSRRRRNTCIGVSVAVVVLLVVIIVILAFTVFKA 60
           M++ASSSS+  KDPKSTQS   AAAARSR+RRNTCIG+S+A+++LL+++I+ILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  KRPITAINSVALADLDVSLNIARLAVDINVTLIADVSITNPNKVGFSYSNSTALLNYRGE 120
           KRPIT +NSVALADLDVSLN+AR++VDINVTLIA ++ITNPNKVGFSY NSTA LNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPIPAGRIDADQSKRMNITLTIMADRLLRSSTVFSDVVAGSMPLNTYTRISGKVRI 180
           LVGEAPI AG+IDA + K MNITLTIMADRLL+++TVFSDVVAGSMPLNTY RISGKV+I
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180

Query: 181 LGIFNIHVVSTTSCDFTLNISERKIGDQQCDYHTKI 212
           LGIFNIHVVSTTSCDF ++ISERK+GDQQC+YHTKI
Sbjct: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

[Close]

BLAST of Lcy04g007930 vs. ExPASy TrEMBL
Match: A0A0A0L094 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.8e-85
Identity = 171/215 (79.53%), Postives = 200/215 (93.02%), Query Frame = 0


Query: 1   MDVASSSSA--KDPKSTQS--AAAARSRRRRNTCIGVSVAVVVLLVVIIVILAFTVFKAK 60
           M++ASSSS+  KDPKSTQS  AAA RSR+RRNTCIG+S+A+++LL++II+ILAFTVFKAK
Sbjct: 1   MEIASSSSSLIKDPKSTQSTAAAATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKAK 60

Query: 61  RPITAINSVALADLDVSLNIARLAVDINVTLIADVSITNPNKVGFSYSNSTALLNYRGEL 120
           RPIT +NSVALADLDVSLN+A ++VDINVTLIAD++ITNPNKVGFSY NSTA LNYRGEL
Sbjct: 61  RPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGEL 120

Query: 121 VGEAPIPAGRIDADQSKRMNITLTIMADRLLRSSTVFSDVVAGSMPLNTYTRISGKVRIL 180
           VGEAPI AG+IDA + K MNITLTIMADRLL+++TVF+D VAGSMPLNTYTRISGKV+IL
Sbjct: 121 VGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKVKIL 180

Query: 181 GIFNIHVVSTTSCDFTLNISERKIGDQQCDYHTKI 212
           GIFNIHVVS+TSCDF ++ISERKIGDQQC+YHTKI
Sbjct: 181 GIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

[Close]

BLAST of Lcy04g007930 vs. ExPASy TrEMBL
Match: A0A6J1HS80 (uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.1e-84
Identity = 174/211 (82.46%), Postives = 194/211 (91.94%), Query Frame = 0


Query: 1   MDVASSSSAKDPKSTQSAAAARSRRRRNTCIGVSVAVVVLLVVIIVILAFTVFKAKRPIT 60
           M++ASS++ KDPKS       RSRRRRNTCIGVS+A V+LL+V+IVILAFTVFKAKRPIT
Sbjct: 1   MEIASSTT-KDPKS------IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPIT 60

Query: 61  AINSVALADLDVSLNIARLAVDINVTLIADVSITNPNKVGFSYSNSTALLNYRGELVGEA 120
            INSVALADLD+SLNIAR AV +N+TLI DVSITNPNKVGFSYSNSTALLNYRGEL+GEA
Sbjct: 61  TINSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEA 120

Query: 121 PIPAGRIDADQSKRMNITLTIMADRLLRSSTVFSDVVAGSMPLNTYTRISGKVRILGIFN 180
           PIP+GRI+A+QSKRMNIT+TIMADRLLRSSTV SDVVAGSMPLNTYTRISGKVRILGIF 
Sbjct: 121 PIPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKVRILGIFK 180

Query: 181 IHVVSTTSCDFTLNISERKIGDQQCDYHTKI 212
           I VVS+TSCDFT++IS+RKIGDQQC YHTKI
Sbjct: 181 IRVVSSTSCDFTIDISDRKIGDQQCSYHTKI 204

[Close]

BLAST of Lcy04g007930 vs. ExPASy TrEMBL
Match: A0A6J1EAI5 (uncharacterized protein LOC111432307 OS=Cucurbita moschata OX=3662 GN=LOC111432307 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 4.1e-84
Identity = 174/211 (82.46%), Postives = 194/211 (91.94%), Query Frame = 0


Query: 1   MDVASSSSAKDPKSTQSAAAARSRRRRNTCIGVSVAVVVLLVVIIVILAFTVFKAKRPIT 60
           M++ASS+  KDPKS       RSRRRRNTCIGVS+A V+LL+V+IVILAFTVFKAKRPIT
Sbjct: 16  MEIASST--KDPKS------IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPIT 75

Query: 61  AINSVALADLDVSLNIARLAVDINVTLIADVSITNPNKVGFSYSNSTALLNYRGELVGEA 120
           AINSVALADLD+SLNIAR AV +N+TLI DVSITNPNKVGFSYSNSTALLNYRGEL+GEA
Sbjct: 76  AINSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEA 135

Query: 121 PIPAGRIDADQSKRMNITLTIMADRLLRSSTVFSDVVAGSMPLNTYTRISGKVRILGIFN 180
           PIP+GRI+A+QSKRMNIT+TIMADRLLRSSTV SDVVAGS+PLNTYTRISGKVRILGIF 
Sbjct: 136 PIPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSIPLNTYTRISGKVRILGIFK 195

Query: 181 IHVVSTTSCDFTLNISERKIGDQQCDYHTKI 212
           I VVS+TSCDFT++IS+RKIGDQQC YHTKI
Sbjct: 196 IRVVSSTSCDFTIDISDRKIGDQQCSYHTKI 218

[Close]

BLAST of Lcy04g007930 vs. ExPASy TrEMBL
Match: A0A6J1DQ35 (uncharacterized protein LOC111023175 OS=Momordica charantia OX=3673 GN=LOC111023175 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.5e-81
Identity = 173/212 (81.60%), Postives = 195/212 (91.98%), Query Frame = 0


Query: 1   MDVASSSSAKDPKSTQSAAAARSRRRRNTCIGVSVAVVVLLVVIIVILAFTVFKAKRPIT 60
           M++ASS++ KD KST   AAARSRRRRN CIG S+  ++LLV++I+ILAFTVFKA+RPIT
Sbjct: 1   MEIASSAT-KDLKST--TAAARSRRRRNICIGASLGALLLLVILILILAFTVFKARRPIT 60

Query: 61  AINSVALADLDVSLNIARLAVDINVTLIADVSITNPNKVGFSYSNSTALLNYRGELVGEA 120
           AINSVALADL VSL+IAR+AVDINVTLIA V++TNPNKVGFSYSNSTALLNYRGELVGEA
Sbjct: 61  AINSVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEA 120

Query: 121 PIPAGRIDADQSKRMNITLTIMADRLL-RSSTVFSDVVAGSMPLNTYTRISGKVRILGIF 180
           PIPAGRIDADQSK MNITLTIMADRLL +S+ VFSDVVAGSMPLNTYTRISG+V+ILGIF
Sbjct: 121 PIPAGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIF 180

Query: 181 NIHVVSTTSCDFTLNISERKIGDQQCDYHTKI 212
            IHVVSTTSCD T++IS RKIGDQQC+YHTKI
Sbjct: 181 KIHVVSTTSCDLTIDISSRKIGDQQCNYHTKI 209

[Close]

BLAST of Lcy04g007930 vs. NCBI nr
Match: XP_038882665.1 (uncharacterized protein LOC120073854 [Benincasa hispida])

HSP 1 Score: 342.0 bits (876), Expect = 3.6e-90
Identity = 183/211 (86.73%), Postives = 201/211 (95.26%), Query Frame = 0


Query: 1   MDVASSSSAKDPKSTQSAAAARSRRRRNTCIGVSVAVVVLLVVIIVILAFTVFKAKRPIT 60
           M++ASSS+ KDPKSTQS AAARSRRRRNTCIG+S+A VVLLVV+IVILAFTVFKAKRPIT
Sbjct: 1   MEIASSSN-KDPKSTQSIAAARSRRRRNTCIGISIATVVLLVVLIVILAFTVFKAKRPIT 60

Query: 61  AINSVALADLDVSLNIARLAVDINVTLIADVSITNPNKVGFSYSNSTALLNYRGELVGEA 120
           AINSV LADLDVSLN+AR++VDINVTLIADV+ITNPNKVGFSYSNSTA LNYRGELVGEA
Sbjct: 61  AINSVTLADLDVSLNLARVSVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEA 120

Query: 121 PIPAGRIDADQSKRMNITLTIMADRLLRSSTVFSDVVAGSMPLNTYTRISGKVRILGIFN 180
           PI AGRIDA Q K MNITLTIMADRLL+++TVFSDVVAG+MPLNTYTRISGKVRILGIFN
Sbjct: 121 PITAGRIDAGQRKEMNITLTIMADRLLKTTTVFSDVVAGTMPLNTYTRISGKVRILGIFN 180

Query: 181 IHVVSTTSCDFTLNISERKIGDQQCDYHTKI 212
           IHVVSTTSCDF ++ISERK+GDQQC+YHTKI
Sbjct: 181 IHVVSTTSCDFNVSISERKVGDQQCNYHTKI 210

[Close]

BLAST of Lcy04g007930 vs. NCBI nr
Match: XP_023518218.1 (uncharacterized protein LOC111781758 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.8 bits (839), Expect = 6.9e-86
Identity = 176/211 (83.41%), Postives = 194/211 (91.94%), Query Frame = 0


Query: 1   MDVASSSSAKDPKSTQSAAAARSRRRRNTCIGVSVAVVVLLVVIIVILAFTVFKAKRPIT 60
           M++ASSSS KDPKS       RSRRRRNTCIGVS+A V+LL+V+IVILAFTVFKAKRPIT
Sbjct: 16  MEIASSSSTKDPKS------IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPIT 75

Query: 61  AINSVALADLDVSLNIARLAVDINVTLIADVSITNPNKVGFSYSNSTALLNYRGELVGEA 120
            INSVALADLD+SLNIAR AV +N+TLI DVSITNPNKVGFSYSNSTALLNYRGEL+GEA
Sbjct: 76  TINSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEA 135

Query: 121 PIPAGRIDADQSKRMNITLTIMADRLLRSSTVFSDVVAGSMPLNTYTRISGKVRILGIFN 180
           PIP+GRI+A+QSKRMNIT+TIMADRLLRSSTV SDVVAGSMPLNTYTRISGKVRILGIF 
Sbjct: 136 PIPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKVRILGIFK 195

Query: 181 IHVVSTTSCDFTLNISERKIGDQQCDYHTKI 212
           I VVS+TSCDFT++IS+RKIGDQQC YHTKI
Sbjct: 196 IRVVSSTSCDFTIDISDRKIGDQQCSYHTKI 220

[Close]

BLAST of Lcy04g007930 vs. NCBI nr
Match: XP_008463309.1 (PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 2.0e-85
Identity = 172/216 (79.63%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MDVASSSSA--KDPKSTQS---AAAARSRRRRNTCIGVSVAVVVLLVVIIVILAFTVFKA 60
           M++ASSSS+  KDPKSTQS   AAAARSR+RRNTCIG+S+A+++LL+++I+ILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  KRPITAINSVALADLDVSLNIARLAVDINVTLIADVSITNPNKVGFSYSNSTALLNYRGE 120
           KRPIT +NSVALADLDVSLN+AR++VDINVTLIA ++ITNPNKVGFSY NSTA LNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPIPAGRIDADQSKRMNITLTIMADRLLRSSTVFSDVVAGSMPLNTYTRISGKVRI 180
           LVGEAPI AG+IDA + K MNITLTIMADRLL+++TVFSDVVAGSMPLNTY RISGKV+I
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180

Query: 181 LGIFNIHVVSTTSCDFTLNISERKIGDQQCDYHTKI 212
           LGIFNIHVVSTTSCDF ++ISERK+GDQQC+YHTKI
Sbjct: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

[Close]

BLAST of Lcy04g007930 vs. NCBI nr
Match: XP_004142665.1 (uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical protein Csa_012636 [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 1.0e-84
Identity = 171/215 (79.53%), Postives = 200/215 (93.02%), Query Frame = 0


Query: 1   MDVASSSSA--KDPKSTQS--AAAARSRRRRNTCIGVSVAVVVLLVVIIVILAFTVFKAK 60
           M++ASSSS+  KDPKSTQS  AAA RSR+RRNTCIG+S+A+++LL++II+ILAFTVFKAK
Sbjct: 1   MEIASSSSSLIKDPKSTQSTAAAATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKAK 60

Query: 61  RPITAINSVALADLDVSLNIARLAVDINVTLIADVSITNPNKVGFSYSNSTALLNYRGEL 120
           RPIT +NSVALADLDVSLN+A ++VDINVTLIAD++ITNPNKVGFSY NSTA LNYRGEL
Sbjct: 61  RPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGEL 120

Query: 121 VGEAPIPAGRIDADQSKRMNITLTIMADRLLRSSTVFSDVVAGSMPLNTYTRISGKVRIL 180
           VGEAPI AG+IDA + K MNITLTIMADRLL+++TVF+D VAGSMPLNTYTRISGKV+IL
Sbjct: 121 VGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKVKIL 180

Query: 181 GIFNIHVVSTTSCDFTLNISERKIGDQQCDYHTKI 212
           GIFNIHVVS+TSCDF ++ISERKIGDQQC+YHTKI
Sbjct: 181 GIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

[Close]

BLAST of Lcy04g007930 vs. NCBI nr
Match: XP_022966458.1 (uncharacterized protein LOC111466106 [Cucurbita maxima])

HSP 1 Score: 321.2 bits (822), Expect = 6.5e-84
Identity = 174/211 (82.46%), Postives = 194/211 (91.94%), Query Frame = 0


Query: 1   MDVASSSSAKDPKSTQSAAAARSRRRRNTCIGVSVAVVVLLVVIIVILAFTVFKAKRPIT 60
           M++ASS++ KDPKS       RSRRRRNTCIGVS+A V+LL+V+IVILAFTVFKAKRPIT
Sbjct: 1   MEIASSTT-KDPKS------IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPIT 60

Query: 61  AINSVALADLDVSLNIARLAVDINVTLIADVSITNPNKVGFSYSNSTALLNYRGELVGEA 120
            INSVALADLD+SLNIAR AV +N+TLI DVSITNPNKVGFSYSNSTALLNYRGEL+GEA
Sbjct: 61  TINSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEA 120

Query: 121 PIPAGRIDADQSKRMNITLTIMADRLLRSSTVFSDVVAGSMPLNTYTRISGKVRILGIFN 180
           PIP+GRI+A+QSKRMNIT+TIMADRLLRSSTV SDVVAGSMPLNTYTRISGKVRILGIF 
Sbjct: 121 PIPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKVRILGIFK 180

Query: 181 IHVVSTTSCDFTLNISERKIGDQQCDYHTKI 212
           I VVS+TSCDFT++IS+RKIGDQQC YHTKI
Sbjct: 181 IRVVSSTSCDFTIDISDRKIGDQQCSYHTKI 204

[Close]

BLAST of Lcy04g007930 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 191.0 bits (484), Expect = 9.4e-49
Identity = 99/208 (47.60%), Postives = 153/208 (73.56%), Query Frame = 0


Query: 6   SSSAKDPKSTQSAAAARSRRRRN--TCIGVSVAVVVLLVVIIVILAFTVFKAKRPITAIN 65
           ++S+ + +S  +  A + RR+RN   CI  ++ +++L+ ++IVILAFT+FK KRP T I+
Sbjct: 28  NASSMETQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTID 87

Query: 66  SVALADLDVSLNIARLAVDINVTLIADVSITNPNKVGFSYSNSTALLNYRGELVGEAPIP 125
           SV +  L  S+N   L V +N+TL  D+S+ NPN++GFSY +S+ALLNYRG+++GEAP+P
Sbjct: 88  SVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLP 147

Query: 126 AGRIDADQSKRMNITLTIMADRLLRSSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHV 185
           A RI A ++  +NITLT+MADRLL  + + SDV+AG +PLNT+ +++GKV +L IF I V
Sbjct: 148 ANRIAARKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKV 207

Query: 186 VSTTSCDFTLNISERKIGDQQCDYHTKI 212
            S++SCD ++++S+R +  Q C Y TK+
Sbjct: 208 QSSSSCDLSISVSDRNVTSQHCKYSTKL 235

[Close]

BLAST of Lcy04g007930 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-23
Identity = 72/200 (36.00%), Postives = 113/200 (56.50%), Query Frame = 0


Query: 12  PKSTQSAAAARSRRRRNTCIGVSVAVV---VLLVVIIVILAFTVFKAKRPITAINSVALA 71
           P S +SA+  ++  R    I  S+ V    ++L  I++ L FTVF+ K PI  +N V + 
Sbjct: 17  PVSDESASNIKNTHRSRNRIKCSICVTATSLILTTIVLTLVFTVFRVKDPIIKMNGVMVN 76

Query: 72  DLD--VSLNIARLAVDINVTLIADVSITNPNKVGFSYSNSTALLNYRGELVGEAPIPAGR 131
            LD     N  +L +  N+++I DVS+ NPN   F YSN+T  + Y+G LVGEA    G+
Sbjct: 77  GLDSVTGTNQVQL-LGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGK 136

Query: 132 IDADQSKRMNITLTIMADRLLRSSTVFSDVV-AGSMPLNTYTRISGKVRILGIFNIHVVS 191
               ++ RMN+T+ IM DR+L    +  ++  +G + + +YTR+ GKV+I+GI   HV  
Sbjct: 137 ARPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTV 196

Query: 192 TTSCDFTLNISERKIGDQQC 206
             +C   +NI+ + I D  C
Sbjct: 197 KMNCTMAVNITGQAIQDVDC 215

[Close]

BLAST of Lcy04g007930 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-15
Identity = 52/188 (27.66%), Postives = 92/188 (48.94%), Query Frame = 0


Query: 25  RRRNTCIGVSVAVVVLLVVIIVILAFTVFKAKRPITAINSVALADLDVSLNIARLAVDIN 84
           +RR  CI   +  V+ ++ +  ++   VFK K PI    S  +  +  ++++    V +N
Sbjct: 3   KRRICCIVSGIIFVLFVIFMTALILAQVFKPKHPILQTVSSTVDGISTNISLP-YEVQLN 62

Query: 85  VTLIADVSITNPNKVGFSYSNSTALLNYRGELVGEAPIPAGRIDADQSKRMNITLTIMAD 144
            TL  ++ + NPN   F Y     L+ YR  LVG   +P+  + A  S  +   L +  D
Sbjct: 63  FTLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLD 122

Query: 145 RLLRS-STVFSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFTLNISERKIGDQ 204
           + + +   +  DV+ G + + T  ++ GK+ +LGIF I + S + C+  L      + DQ
Sbjct: 123 KFVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVEDQ 182

Query: 205 QCDYHTKI 212
            CD  TK+
Sbjct: 183 VCDLKTKL 189

[Close]

BLAST of Lcy04g007930 vs. TAIR 10
Match: AT4G23930.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10
Identity = 47/184 (25.54%), Postives = 91/184 (49.46%), Query Frame = 0


Query: 34  SVAVVVLLVVIIVILA----FTVFKAKRPITAINSVALADLDVSLNIARLAVDINVTLIA 93
           S AV  L +V ++I A     TVF+ + P  ++ SV +    V+ +       ++ T   
Sbjct: 10  SCAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVANS------SVSFTFSQ 69

Query: 94  DVSITNPNKVGFSYSNSTALLNYRGELVGEAPIPAGRIDADQSKRMNITLTIMADRLLRS 153
             ++ NPN+  FS+ N+   L Y G  +G   +PAG I++ ++KRM  T ++ +  L  +
Sbjct: 70  FSAVRNPNRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPLAAA 129

Query: 154 ST--------VFSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFTLNISERKIG 206
           S+          SD    ++ + +   ++G+VR+LG+F   + +  +C   ++ S+  I 
Sbjct: 130 SSSQISAAQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRIAISSSDGSIV 187

[Close]

BLAST of Lcy04g007930 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 61.6 bits (148), Expect = 8.6e-10
Identity = 53/144 (36.81%), Postives = 80/144 (55.56%), Query Frame = 0


Query: 22  RSRRRRN--TCIGVSVAVVVLLVVIIVILAFTVFKAKRPITAINSVALADLDVSLNIARL 81
           RS  R N  +C   +V +++LLVV++V+  FTVFK K P  ++N+V L    VS N A  
Sbjct: 9   RSSGRTNLASCAVATVFLLILLVVLLVVY-FTVFKPKDPKISVNAVQLPSFAVSNNTA-- 68

Query: 82  AVDINVTLIADVSITNPNKVGFSYSNSTALLNYRGELVGEAPIPAGRIDADQSKRMNITL 141
               N +    V++ NPN+  FS+ +S+  L Y G  VG   IPAG+ID+ + + M  T 
Sbjct: 69  ----NFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYMAATF 128

Query: 142 TIMADRLL-RSSTVFSDVVAGSMP 163
           T+ +  +   SS+  S V A  +P
Sbjct: 129 TVHSFPISPPSSSAISTVSAAVIP 145

The following BLAST results are available for this feature:

BLAST of Lcy04g007930 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g007930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CJB5	9.8e-86	79.63	uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=...	[more]
A0A0A0L094	4.8e-85	79.53	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 ...	[more]
A0A6J1HS80	3.1e-84	82.46	uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106...	[more]
A0A6J1EAI5	4.1e-84	82.46	uncharacterized protein LOC111432307 OS=Cucurbita moschata OX=3662 GN=LOC1114323...	[more]
A0A6J1DQ35	2.5e-81	81.60	uncharacterized protein LOC111023175 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Lcy04g007930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882665.1	3.6e-90	86.73	uncharacterized protein LOC120073854 [Benincasa hispida]	[more]
XP_023518218.1	6.9e-86	83.41	uncharacterized protein LOC111781758 [Cucurbita pepo subsp. pepo]	[more]
XP_008463309.1	2.0e-85	79.63	PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo]	[more]
XP_004142665.1	1.0e-84	79.53	uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical ...	[more]
XP_022966458.1	6.5e-84	82.46	uncharacterized protein LOC111466106 [Cucurbita maxima]	[more]

BLAST of Lcy04g007930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54200.1	9.4e-49	47.60	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G46150.1	1.1e-23	36.00	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G05975.1	1.8e-15	27.66	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G23930.1	1.3e-10	25.54	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G64450.1	8.6e-10	36.81	Glycine-rich protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 91..181 e-value: 8.5E-12 score: 45.5
None	No IPR available	GENE3D	2.60.40.1820		coord: 44..201 e-value: 1.1E-10 score: 43.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 20..210
None	No IPR available	PANTHER	PTHR31852:SF122	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 20..210
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 84..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g007930.1	Lcy04g007930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane