Lcy04g007580 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g007580
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	glutamyl-tRNA reductase-binding protein, chloroplastic
Location	Chr04: 38287614 .. 38297245 (-)
RNA-Seq Expression	Lcy04g007580
Synteny	Lcy04g007580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAATAGCCGCGTGGAGTTGCTTGAGCCGGCCGGCGAGAGAAGTTCGGTGAACAATGGCGACTGTGGCGCCACCTTCCCTAACCTTCCAATTTCGTTCTCGCACTGCCTTAAATGGCCGATTCCCCTTTCACTTTCCCCGTTCCTTGACCTTATCCTTCAATCCTCGTCTTCGTCTTCGTCTTCCATTTTCCATGGCCGCGTCAACGGAGTCAACTTCTCAGGTACCTTCTTCTCTCCCCTCTTCCAGGCTTCCCGCCATCAATTTTTTCTTGATTTCATTCGTGCCGGAACAATTTTGTAGCGTACGAAAGAGATTTACTGTATTTCCTTTTGTTTTGGTTTTTGTGATTGATTAGACTGTAGCGTCTGGCGATGATGCCAACAGCGATGAAATTGATGTGTCGAAGTTGATTCAGGATCATCAGGTATTTCTTTCTGTTGATAGTATCTTTTTCCGATTCAAGTAGTGATGCATGCCGGTAGTGGAAAGATTGGCGCGCTCTCGTAGTTTGGTTGCGATGGTTTTCAACCTCGAGATTTGATTGCTTGTGCTGAATTGTTTGTTGTGTTCTGTGTATGTATTAAGTTATTTCTGAATGTGAATGGTGATGTTCTAGGAAAAAGCGGCTCGGCTTTTGCCAGCTGAAGAGATTCGAACACTGTTGGATCAGAGCGTGCGCGGCATGCTCTCCACATTTTCTCAGGTTTTCACTTTCTTCTGATCTTTAGTCTTGTTAATTCTATCGCCTTTGGAATTTGCCACATAACTATAATTTTGTGACTGGCATTCCTAGTACAATTAGATCCGATTTCTTTGTCTGGCATTTGAATTTGATTAGGTTCTTAGTCTTTAGTAATAAGGTCTGCTCCTGTGCAGAGCTTTGAAGGTTATCCGTCTGGATCTTTTGTTGACTTTGCATGCGATGCTGATGGTACTCCTATACTTGCTGTAAGCAGTCTAGCAGAGCATGCTAAGGTATTGTATCGTTCATCCTTATGAACCCAGTTGAGAATTTCGGTTTTGGTAGCAATTCTTATATATTATTGAATTTTATGTGTGAAGTAATCGTTAATCATGTGAAAGTTTGGTCTTTCTTTTCTGTGCAGAACTTGGCAACTAATCCAAAATGCTCATTGCTTGTGGCGAAAGAACCTGAGGACAGGGGAACTTTAATGGTCACTCTTCATGGTGATGCTGTGGCTGTAAGATATTTAGCTTATGTTCACTATATATTTCTTCTTTCCATTTGTCAGTCTATCTCATGCGTTCAATAGAAATGCATTGATATGTTTATGTTCATGTGTGTCTTACAGGACAAGTGTCCTTCTTCGTGAACAGTATAGCATGACAATCTGAATTATGTTCTTGTTAATAATTTAGGTTTCTGAAGAAGATAGACCTGCTGTTCGTGCTGCATATTTGTCCAAGCATCCAAATGCATTTTGGGTAGCTAATACCATTCTCGAGAATGCTTATGTTTTTCATCAGATGTTTCTTCCAGTTTATACATAAAAGATGAACCAATACTTCCTACCTATGTGAAGGTTGACTTTGGCGACTTCCAATTTGTGTACATCAAACCAAAAGTGGTACGATATGTGTCTGGGGTCGCAACAGCTTCTTTGGGTTCAGGAGGTTTGTGTTATTGAGTACATAGACTGCCTTTTCTCCTTTTCCTCTTTTATTTTACTTCGGTCATATGTTTTTTCATCAAAAACAAAAAAGGGAAAGGGTTGTACATAACTTAATTTCTTGAACCAGGTCTTTGATCGTCTACATTTTTGTTTAGTTCAATATGTGGTGTGAGGAGATTCAACCTCTGACATCTTGGTCGAGAATATATGCCTTAACCAGTTGTTTATGTCTTTGACTGTCTGCTTAAAATATCTTATTGCTTCATTAGGCTTGTTTGCTGACATCTAACTCTTTTACCTTTTTAATCGAAGAACTAAGCAGTGAAGAGTACAAGGCAGCACAAGTTGATCCGGTAGCTCAATTTTCAAAGCCTGTGACGGTGATAGCATCATTTTAAGATCTTGCTTGTTATTTCAAGTTTTCATTACAAATCACATATTTTCTAATTCAGATTCTGATATTTACAGTCTCACATGAATAGAGATCATACTGAAGATACAAAGATGATCGTGAGACATTGGACATCCATTCCGGTAAAACAAATATAATCCATAGGTTCTGTTTAATACAAGTTCACTTGGGATGATTTAATATTCTGTTAGTTTTTGATTTTCAATCAGATTCTGGATCATGTGATCAGGGGTGAGTGACTGGGTTACAATTGGACGGAGTATCTTGGTCTGGGGTAGCTTTTGAGAATAATTTATATGCAATTATACTTTTATCAGTTTTAAGTTTTTATATATTTCAATTTTTAGTAGCTGAAGCTTTTGACTGTGAAATTGCATTTACTTTTCTCTTTGGATTCAATGGAGGACAACACATAGTTTTCTCAGGCAGAGAGAGAGAGAGAGAGAGAGAGACAATGACCCATCTTGTTCTTATATTGATGTTCTAGCACTGTATAATTAATTTCTGGATACTTTGATGGACTGTCGATGTGAAACTGTACTACTTTTATCTGCAGGTTGATTCTGCCATCATGCTAGATTTGGATAGCCTTGGGTTTAATGTCAAGGTATCAGTACTGTGAACCAAATTATTTGTTAAACCTTTGTTGGCTTGTATTGTTTCATAAGAAATAATTATTATTACGTGTCTTTACTGAAATATTAATACTGTGAACTAAAGTTCTCTGTGCCTTTGCTAAAATAGTAGACAATGTTAGGGTTGTAATACATTAAAACTTAAAAGTTTACATGTTAGGTAAGTAGTAGTCATACCTAATCATTATGCTGTGGACTAATAAATCTTGACAGGAATAAATGAGAATATGGATAGTTGGACGCAGGAATTTTGGCCTATGCTATGTTATATTATACCAATCTTTAAAGATCAAGCTATTAAATAAATATTTACTGATTAATGTACATTTATTCTTAACAAAAGGTTCATTGACTTCGGTTCTGCTTTCTAAAGGGCGATGTCTTTTTTTTTCTTTTTTGATTTCCTTTCTTCTTTTGTTTGTTTAGGCTAGTTATCAGGGGAGTTCATTTAAGCTTCGTGTACCTTTTCCAAGACGAGCAGAAAATAGAAAGTGAGACTTCTTATCCTTGAATCGTGAATGCTGAGGCAAAAAGTTGTCTATTGCATGCTTTTGTGCACCTAGATGTTTCTGGTCTACTGCATCCTTGAATTTTCCCATTTACATTTTGTTGATCAGTTGCTTCTGTAGAAATAAGTGTTCCTTAAATTCTAGGGAAAAGTTCAATTTTCACTTCAATTTTATCTGGTTAAATTCTAAACTCTAGTGAAATTGAAAACATCCTCAAAGCCAAGTTTGAGAATTAACCAGAAACCAACCAACAAATCATCCAAAATCTTATTCCAAACCCAACTCGAAATTAAAAAAAAAAAAAAAAAAACCAAACCTAATTCAGGGCCAAAATGCCCATAATACCTAATACTAGCAGTAGCACCTTGCTCAGTCGTTGCTTGCAAGAATGCTCTTCTAGCCGTAGATCTCTAAATGGTTGAAATTCATCTAATAAAAGGTATAATTTACTACTTATTGAAGTTTAGACTTCAATTGGATGAAATTAAAATTTTAAAGTTGGAATTAGCTCTTCCATTTGCTAATCCTAACATTGTTGAACTCGTTCCATTATACATTTATCCTAAAAGTTTGATGTTCGAATCTCCACAATTATCTTAGTACATGGACAAAACAAAATTTGACCTAAATTCTATGTGCAGTATAAGAGAACATTGCATATGTTTATTCTTAATTTTGTGACTGTGTGCATGGAAAAAATTGTGAGGATTTTGATTTTCTGAAAACTGTATAACAATAACCAATGAATCGATAAATTATAACTGAAAATCTGAAATATCTAACACGAGCTTACATGTTTAATTTTTGAAACTTTGGGACCAGAATATCTTTCCATCTTTCTTTTCATTTACAATTCTGTATTGTGAAGAACTTCAAGGAAATAGTTATTGCACAATGTTATTTTCTTTCATGTTGAAGTCCTGGTTCATGTTGTGAAGGCTGATCTCGAATTCTAAGCAGTTAGATATAGATGACATGTGGAGATAATAGGATTGTTACTTGAAAAACTTCCTGCACATCTCTCTTGGTCTTTAATATTTAGCCTGTTTCTTTACTTTTCTGCTCACTTTATCTGTTCCACCTTTTTTTAGGGACGTCAAGACTCTTGTGGTGGAAATGTTAGAAGCGGCTAAGCCTCAAGTTTAACCATCTTCACAGGAAGTTGTTCAAGATTATGTTCTCTTTCTAATGTTTAAATTAAACTTGTCATGAGTTTTCTTGCTTGCTCTTGGCATCTCAAAGTATTTGCATTCCCTCTCATATAGTAGTTTTAAGTTATTACATGTGAAGGAAGAACCCATACATGTAGAATGTGATTACAAATTGAAATGATCAACTTGTAAATTCATTTTACTTTCTTTTGTGAATGAAATGGCAGGGTAGATTTGAGGGGCCATGATGATCATCAAGCGTGATGGAAATGTAATGTAAGGATTCTCCTAGCAAAAATTTTTCTTGGGTAAATTAAACCTTTGATATCGGTCTCCATATTTTTAAAACTAACTCTTTTGGTCCTGAGGATTTGGATTTAGTTTTTGTTTGGTCTTTGAGGTTTTAAAGGTGGCATGTTTGGTCTCCAATGTTTGCATTTGATAACTAATTAGTCTTTGAAGTTTGAAATTGGTTTGTAGTATATAAAAAAAAAAGAAAAATATTTTTCCACTCATTCAAAAAATATATATTGGGAAAGTCTAATGCATATGTTAACAACCACATCATTATTTCATTAGATTCTCCAAATTTTTTTTTTTAAATCATTATTTCACTAGATTAACTTGAGGTCAATTTTCCAACCTGAGCATTAATCAGCATTAGACATATATCTATCTTCTATCGAGGTTCAAAATTTTCACTCCACATATTGTTGAGTTAAAAAAACTTATGTCAATCCTACTCAAGACCATTTAGAAATCAACTCAAATGTCAGAACCTAATTAGAAATTAAATTCAAATTTTGAAGACCAAACGTATCATTTTTAAAACCTTTAAAACTAAAGACAATAGAAATTAAATTCAAATTTTAAGAACTGAGGGTTCGTTTGGAATACATTTTAATTTAAATGTTTTTTAAGAATTCATTTTTTATAAAACATTTTGTATAAAAATTGTTTAGAATTTAAACACTCACATGTTTGGTTGCATTCCCTCATAAGTGTTTTTATACCCAAGTTATTGTATACTTAACTTTTTTAAAAAGTTGGTTTCAAGTGTTTTTCTCAAAATGGTTTATTTATCAATCTAATTTTCTAATAGGCTAAATTATAAAAAATACCCCTGAACTATGGGGTTTGTTTCAAAAATGCCCCTGAACTTTAAAAAGTTTAAAAAATGCCTCTGAACTTTGAAAAATGTTTCAAAAATATCCTTGCCGTTAATTTTGGATGGAAACCGTTAAAGTTTGAGTTTCAAAAATACCCTTGAACTTTCAAAAAAATTTCAAAAATACCCTTATTGAAAAATCCTTCTTTTTTTTGGGCCAGTTGCAAAAGTAGCAAATTGGCCCAAACTAATTGCAAAAGTAGCAGCCTGCAGAAATATTTGCAAAAATGACAAAATCTCACCATCAAAAAAGTAAAATTACTAAAATGCCCATCACTGATAGAAAACTTTCTATCACTGATAGATTCTATCAGTGATAGAAAAACTTTCTATCAGTGATAGAAGTTTCTATCATTGATATTTTCTATCACTGATAGAAAATTTTTCTACCACTGATAGAATCTATCAGTGATAGAAAGACTTTCTATCATAGAAGATTTCTATCAATATATATATATAAATTGACGAGGAAAAAGAAAATGCGCGCGCCAATCAGTTTTTCTATCACTGATAGATTCTATCAGTGATAGAAAAAGTTTCTATTAGTGATAAAAATCTCCTATCACTGATAGAAACTTTATTCTATTAGTGATAGAAACTTTCTATCACTGATAGAAAATGTTTCTACCACTGATATAATCTATCAGTGATAGAAACTTTATTCTATCAGTGATAGCAACTTTCTATCACTGATAGAAAATTTTTCTACACTAATAGAATCTATCAATGATAGAAAGACTTTCTATCATAGAAGATTTCGATCATTTTCCTACCACTGATAGAAGATAGAAAGACTTTCTATCATAGAAGATTTCTATCAATATATATATATTTATATATATATATAATTGACGAGGAAGAAGAAGATGCGGGCGCTAATCAGTTTTTCTATCACTGATAGATTCTATCAGTGATAGAAAAAGTTTCTATCAGTGATAGAAAGCTTTTCTATTAGTAATAGAAACTTTTATTCTATCAGTGATAGAAACTTTCTATCACTGATAGAAAATGTTTCTACCACTGATAGAATCTATCAGTGATAGAAACTTTCTATCACTGATAGAAAATGTTTCTACCACTGATAGAATCTATCAGTGATAGAAACTTTCTAACACTGATAGAAAAATTTTCTATCACTGATAGAATCTATCAGTGATAGAAGATTTCTATCAATAAAAATAAAAAATAAAAAAAAACTGACGAGGAAGAAAAAGATGCGCTCGCCAATCAGGGATAGGGACAGGGGCAATTTAGGAATATAAAAAATTAATTAAAAATTTTTGCCATATTTGCAAATATTTTTAAAAATTGCTATATTTGTCATTATTTACCCTCATGTTGCCATCCATTACAATTATCCTTTTTTTTTTCCTTCTCCCACCATAAATTAACTCTTCTTCCAAAAATTAATGAGAAACTTTACTTATTTGTCATGTATTCATAATCTAGGAGCTTTCTTTCTCTTTCAACACATCCAAAGCATTTGGCTAGATTTTCGTATCAAATTTTCAAGATGACTTTTGTTTTGTTCTTGAAATTCTACATGTGCTTGACTTTCAATATTATTTCCTCACCAACTATTACCCTATTAGCTTTCTCTATATTCCTTTTACGAAAAATAAATGAAACTATTGTTGTATACGGATTCTAACAATTCTTAAATATCAATAAGAACAAAATCATTATATAAAACTTTTGATTGATTAATCTTATAAATTGGACCAAACCCACAGTCTTATAAACATTTATTCTTCTTATCATTTAGATACACAAACAGAGAGAGCAAAAAATGAAATAATATATATACATATATATGTTGTTTTCTCACCCTTATCTTCTTTACGTTTTTTAAAAGAGAAAACTCGATTTCAAAGTCTGTTTTTATCTGGTATTGAGTTGCACACAACCTTTATAAGCAAAGTTTTGCATTAATTTTCATGGAGAAAGAATTTACGGTGAGAGAGGAGGAAAAAAAAAAAGAATCATTTTTCAATAAGGGTATTTTTGAATTTTTTTTTAAAGTGCAAGGGTATTTTTGAAACTCAAACTTTAACGGTTTCCATCCAAAATTAACAGCAAGGGTATTTTTGAAACATTCTTCAAAGTTCAGGGGTATATTTGAAACTATTTAAAGTTCAGGGGCATTTTTGAAACAAACCCCATAGTTCAGGGCATTTTTTATAATTTAGCCTTTCTAATAAATCATTTTTAGTGGTTGTCAAACACTAGAAAATTTTTCAAAATGATTTTTTTTTCAAAATTAAACCGAAAAGTTAAACCAAACCCACCTTAAAACAATTAGTTTTAAAACTCATAACAAAAAGGAAACTAAGTTCAAATCTACCAATATCTAGAAAAAAAATGTTTTTATTTTTATTTTTTTGATCCTTTTCCTTTTTCTTCTGATACATTCTTTTTTGGACATTTTTTATTAATATTATTATTTTTAAAACTTATTAGAAAAATATAGTTGTTTTGAAACTTTTTATTAAAATATTGTTGTTTAAAATTCACGTTTGCAGGTTGTCTCTTGAAGAAAGTGAAATAAAATTAAAAAAATAATAAATTATAATATGATATTCAATTTATTTAAATCATTAAAAAAACAATACTTATTTGATTTTAATAATTAATTAATTTTAGTGGCTTCAAGTACAAGAAAGTGAAATAAAATTTAATCCAAAAATTCAGTTTTTTTAAAAACATTTTAAAAAAATATTACTTATTTGATTTCTTAAAACAATGTTATATAAAAAAAATAAAATAAAATAAAATAAAAAAGCTAGGAAGGAAAAGGAAACGAAAAAAAGACAAACAAATTTCCAACCTGGCAACTTGACAATATGGTAAATAACACGCGTAGAGATGACCTACGTTAATTAACAGTTTTTTTTTTAAATATCCGTCGATTAGCGTGTTTTTGAATTTCAAATTTTTTGCCACGTCAACAGGTCGTCTCTTCACGACCTGCAAACACGAATTTTAAACAACAATGTTTTAATAAAGTTTCCAAACAACTATATTTCACTAATAAGTTTTAAAAATAATAATATTAATAAAAAATGTCCTTTTTTACATATTTCTCACTAATTAATCTTTTTTTAATAAGTTGGATTCTGACTCAACTATGGTGTAAAGTTGAGTAGATTAACCGAAAGTAATTTGAATTTATTAAAAAAATTTACAAGTAATTACTATTCAACATTTTCTTTTAAGTCCTGAAATTAATTAATATTCAAAACCTACATATATTGTTTTTATTTTTTCTTAAAATGTTAGATTTGGTCTGGTTTAGTTGGAATTAAAATGGATGGGAACAGATTGAACCAACTTGAATCTCATAAATTTGAAAGTCAAATTCAAACCAATATTCTCCCAAAAAAAATAATAATAATAATAATAAAAAAAAAAAAATCAAACCAATATCGTTTAGGCGACCTCCCCTATGAGAACACATCACTAGTTATTATTTAACAATCCACTTGTATTTTCCCACTTGTTTTTTTTTTTTTTTTTCAAGATGCAAATTCAAAATTCAAGATTTTTTGAGCCATTTTTAAAATTATGGCTTGAGTTACTTAAACATTTTGGTATATGGATATTGTTTTGGGGGTATTTACCTTACCCTTTCTATTTATTTATTTATTTTTGAAACTTTTTTCGACAATATGTAGGGAAGGGGGATTCGAACCACAGACCTTGTGGTTATACAACTTTATTGCTTTCCTTTATTGAGTGCTTTGCCTTTTATTTTGTCGATTACGAAAAAGATAATGATAAGTGGGGGTCCTGTCCCACCATATCTTATCGTAATCTCTTCTTTTTCAAAAAGAAAGATTCCAAAGAGATAAGATGTCAGTCAGGGGTCCTGTCCTGTCGGCCACTCTTGGGATTATTTCTCGATGTACTCAATTTGTCGATGACACGTGTAATAACCTGTATAGTAATTTGATATCTGTGCATTTGCACAGGGCAAAATCAAATTTCTATATAAGGGCACGCGTTCCGACCCTCAATGGTATCAGAGCCTTAGAGCTCAACTTCTCTCTAAAAACTTCTCTCCCTCTCTCATGGAGTAAACTCTTTTCTAGAATCAGAGAAGGATGATAGCCTATCTCTA

mRNA sequence

ATCAATAGCCGCGTGGAGTTGCTTGAGCCGGCCGGCGAGAGAAGTTCGGTGAACAATGGCGACTGTGGCGCCACCTTCCCTAACCTTCCAATTTCGTTCTCGCACTGCCTTAAATGGCCGATTCCCCTTTCACTTTCCCCGTTCCTTGACCTTATCCTTCAATCCTCGTCTTCGTCTTCGTCTTCCATTTTCCATGGCCGCGTCAACGGAGTCAACTTCTCAGACTGTAGCGTCTGGCGATGATGCCAACAGCGATGAAATTGATGTGTCGAAGTTGATTCAGGATCATCAGGAAAAAGCGGCTCGGCTTTTGCCAGCTGAAGAGATTCGAACACTGTTGGATCAGAGCGTGCGCGGCATGCTCTCCACATTTTCTCAGAGCTTTGAAGGTTATCCGTCTGGATCTTTTGTTGACTTTGCATGCGATGCTGATGGTACTCCTATACTTGCTGTAAGCAGTCTAGCAGAGCATGCTAAGAACTTGGCAACTAATCCAAAATGCTCATTGCTTGTGGCGAAAGAACCTGAGGACAGGGGAACTTTAATGGTCACTCTTCATGGTGATGCTGTGGCTGTTTCTGAAGAAGATAGACCTGCTGTTCGTGCTGCATATTTGTCCAAGCATCCAAATGCATTTTGGGTTGACTTTGGCGACTTCCAATTTGTGTACATCAAACCAAAAGTGGTACGATATGTGTCTGGGGTCGCAACAGCTTCTTTGGGTTCAGGAGAACTAAGCAGTGAAGAGTACAAGGCAGCACAAGTTGATCCGGTAGCTCAATTTTCAAAGCCTGTGACGTCTCACATGAATAGAGATCATACTGAAGATACAAAGATGATCGTGAGACATTGGACATCCATTCCGGTTGATTCTGCCATCATGCTAGATTTGGATAGCCTTGGGTTTAATGTCAAGGCTAGTTATCAGGGGAGTTCATTTAAGCTTCGTGTACCTTTTCCAAGACGAGCAGAAAATAGAAAGGACGTCAAGACTCTTGTGGTGGAAATGTTAGAAGCGGCTAAGCCTCAAGTTTAACCATCTTCACAGGAAGGTAGATTTGAGGGGCCATGATGATCATCAAGCGTGATGGAAATGTAATGGAAGGGGGATTCGAACCACAGACCTTGTGGTTATACAACTTTATTGCTTTCCTTTATTGAGTGCTTTGCCTTTTATTTTGTCGATTACGAAAAAGATAATGATAAGTGGGGGTCCTGTCCCACCATATCTTATCGTAATCTCTTCTTTTTCAAAAAGAAAGATTCCAAAGAGATAAGATGTCAGTCAGGGGTCCTGTCCTGTCGGCCACTCTTGGGATTATTTCTCGATGTACTCAATTTGTCGATGACACGTGTAATAACCTGTATAGTAATTTGATATCTGTGCATTTGCACAGGGCAAAATCAAATTTCTATATAAGGGCACGCGTTCCGACCCTCAATGGTATCAGAGCCTTAGAGCTCAACTTCTCTCTAAAAACTTCTCTCCCTCTCTCATGGAGTAAACTCTTTTCTAGAATCAGAGAAGGATGATAGCCTATCTCTA

Coding sequence (CDS)

ATGGCGACTGTGGCGCCACCTTCCCTAACCTTCCAATTTCGTTCTCGCACTGCCTTAAATGGCCGATTCCCCTTTCACTTTCCCCGTTCCTTGACCTTATCCTTCAATCCTCGTCTTCGTCTTCGTCTTCCATTTTCCATGGCCGCGTCAACGGAGTCAACTTCTCAGACTGTAGCGTCTGGCGATGATGCCAACAGCGATGAAATTGATGTGTCGAAGTTGATTCAGGATCATCAGGAAAAAGCGGCTCGGCTTTTGCCAGCTGAAGAGATTCGAACACTGTTGGATCAGAGCGTGCGCGGCATGCTCTCCACATTTTCTCAGAGCTTTGAAGGTTATCCGTCTGGATCTTTTGTTGACTTTGCATGCGATGCTGATGGTACTCCTATACTTGCTGTAAGCAGTCTAGCAGAGCATGCTAAGAACTTGGCAACTAATCCAAAATGCTCATTGCTTGTGGCGAAAGAACCTGAGGACAGGGGAACTTTAATGGTCACTCTTCATGGTGATGCTGTGGCTGTTTCTGAAGAAGATAGACCTGCTGTTCGTGCTGCATATTTGTCCAAGCATCCAAATGCATTTTGGGTTGACTTTGGCGACTTCCAATTTGTGTACATCAAACCAAAAGTGGTACGATATGTGTCTGGGGTCGCAACAGCTTCTTTGGGTTCAGGAGAACTAAGCAGTGAAGAGTACAAGGCAGCACAAGTTGATCCGGTAGCTCAATTTTCAAAGCCTGTGACGTCTCACATGAATAGAGATCATACTGAAGATACAAAGATGATCGTGAGACATTGGACATCCATTCCGGTTGATTCTGCCATCATGCTAGATTTGGATAGCCTTGGGTTTAATGTCAAGGCTAGTTATCAGGGGAGTTCATTTAAGCTTCGTGTACCTTTTCCAAGACGAGCAGAAAATAGAAAGGACGTCAAGACTCTTGTGGTGGAAATGTTAGAAGCGGCTAAGCCTCAAGTTTAA

Protein sequence

MATVAPPSLTFQFRSRTALNGRFPFHFPRSLTLSFNPRLRLRLPFSMAASTESTSQTVASGDDANSDEIDVSKLIQDHQEKAARLLPAEEIRTLLDQSVRGMLSTFSQSFEGYPSGSFVDFACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLMVTLHGDAVAVSEEDRPAVRAAYLSKHPNAFWVDFGDFQFVYIKPKVVRYVSGVATASLGSGELSSEEYKAAQVDPVAQFSKPVTSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGSSFKLRVPFPRRAENRKDVKTLVVEMLEAAKPQV

Homology

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BLAST of Lcy04g007580 vs. ExPASy Swiss-Prot
Match: Q9LU39 (Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLUTRBP PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.4e-09
Identity = 56/235 (23.83%), Postives = 107/235 (45.53%), Query Frame = 0


Query: 87  PAEEIRTLLDQSVRGMLSTFSQSFEGYPSGSFVDFACDADGTPILAVSSLAEHAKNLATN 146
           PAE  R++++ S  G LST +   +G+P G  V FA D DGTP+L ++      ++++ +
Sbjct: 61  PAEVSRSIMELSSVGTLSTLTH--DGWPLGVGVRFAVDKDGTPVLCLN------RSVSPD 120

Query: 147 PKCSLLVAKEPEDRGTLMVTLHGDAVAVSEEDRPAVRAAYLSKHPNAFWVD-FG-----D 206
            + +L V  E     T   T+ G      ++         + K  +A W + FG     D
Sbjct: 121 KRSALHVQLEQCGLRTPQCTIQGSIGRPGDDT--------VLKRLSATWREKFGEEVKED 180

Query: 207 FQFVYIKPKVVRYVSGVATASLGSGELSSEEYKAAQVDPVAQFSKPVTSHMNRDHTEDTK 266
             +V    +V++    +         ++S +YK A  DP+   ++ + + +N ++ ED  
Sbjct: 181 SLYVVAVDRVLQMEDFMEDGIW----VASSDYKNASPDPLRDIAEDIVNQINANNMEDIF 240

Query: 267 MIVRHWTSIP--VDSAIMLDLDSLGFNVKASYQGSSFKLRVPFPRRAENRKDVKT 314
                +  +   V    M+ +D LGF+++       + +R+PFP    + K  K+
Sbjct: 241 RFCNVYVDLDFVVSETKMIWMDRLGFDLRVWSPRGVYDVRIPFPMEVTDEKGAKS 275

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BLAST of Lcy04g007580 vs. ExPASy TrEMBL
Match: A0A6J1EGN2 (glutamyl-tRNA reductase-binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432378 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 1.0e-166
Identity = 302/326 (92.64%), Postives = 311/326 (95.40%), Query Frame = 0


Query: 1   MATVAPPSLTFQFRSRTALNGRFPFHFPRSLTLSFNPRLRLRLPFSMAASTESTSQTVAS 60
           MATV PPSLTFQFRSR   NGR  FHFPRSL  SFNPRLR RLPFSMAASTESTSQ VAS
Sbjct: 1   MATVTPPSLTFQFRSRNTFNGRIGFHFPRSLASSFNPRLRFRLPFSMAASTESTSQAVAS 60

Query: 61  GDDANSDEIDVSKLIQDHQEKAARLLPAEEIRTLLDQSVRGMLSTFSQSFEGYPSGSFVD 120
           GDDANSDEIDVSKLIQ HQEKAARLLPAEEIRTLLDQSVRGMLSTFS+SFEGYPSGSFVD
Sbjct: 61  GDDANSDEIDVSKLIQAHQEKAARLLPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSFVD 120

Query: 121 FACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLMVTLHGDAVAVSEEDRP 180
           FACDADGTPILAVSSLAEHAKNLA NPKCSLLVAKEPEDRGTL+VT+HGDAV VSEEDRP
Sbjct: 121 FACDADGTPILAVSSLAEHAKNLAANPKCSLLVAKEPEDRGTLVVTVHGDAVPVSEEDRP 180

Query: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVVRYVSGVATASLGSGELSSEEYKAAQVDPV 240
           AVRAAYLSKHPNAFWVDFGDFQFVYIKPKV+RYVSGVATASLGSGELSSEEYKAAQVDP+
Sbjct: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSSEEYKAAQVDPI 240

Query: 241 AQFSKPVTSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGSSFKLRVP 300
            QF+KPV SHMNRDHTEDTKMIVRHW+SIPVDSAIMLDLDSLGFNVKASYQG+SFKLRVP
Sbjct: 241 VQFAKPVMSHMNRDHTEDTKMIVRHWSSIPVDSAIMLDLDSLGFNVKASYQGNSFKLRVP 300

Query: 301 FPRRAENRKDVKTLVVEMLEAAKPQV 327
           FPRRAENRKDVKTL+VEMLEAAKPQV
Sbjct: 301 FPRRAENRKDVKTLIVEMLEAAKPQV 326

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BLAST of Lcy04g007580 vs. ExPASy TrEMBL
Match: A0A6J1HMU8 (glutamyl-tRNA reductase-binding protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111466055 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 4.3e-165
Identity = 299/326 (91.72%), Postives = 309/326 (94.79%), Query Frame = 0


Query: 1   MATVAPPSLTFQFRSRTALNGRFPFHFPRSLTLSFNPRLRLRLPFSMAASTESTSQTVAS 60
           MATV PPSLTFQFR R   NGR  F FPRSL  SFNPRLR RLPF M+ASTESTSQ VAS
Sbjct: 1   MATVTPPSLTFQFRPRNTFNGRIGFRFPRSLASSFNPRLRFRLPFLMSASTESTSQAVAS 60

Query: 61  GDDANSDEIDVSKLIQDHQEKAARLLPAEEIRTLLDQSVRGMLSTFSQSFEGYPSGSFVD 120
           GDDANSDEID+SKLIQ HQEKAARLLPAEEIRTLLDQSVRGMLSTFS+SFEGYPSGSFVD
Sbjct: 61  GDDANSDEIDISKLIQAHQEKAARLLPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSFVD 120

Query: 121 FACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLMVTLHGDAVAVSEEDRP 180
           FACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTL+VT+HGDAV VSEEDRP
Sbjct: 121 FACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTVHGDAVPVSEEDRP 180

Query: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVVRYVSGVATASLGSGELSSEEYKAAQVDPV 240
           AVRAAYLSKHPNAFWVDFGDFQFVYIKPKV+RYVSGVATASLGSGELSSEEYKA QVDP+
Sbjct: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSSEEYKATQVDPI 240

Query: 241 AQFSKPVTSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGSSFKLRVP 300
           AQF+KPV SHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQG+SFKLRVP
Sbjct: 241 AQFAKPVMSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGNSFKLRVP 300

Query: 301 FPRRAENRKDVKTLVVEMLEAAKPQV 327
           FPRRAENRKDVKTL+VEMLEAAKPQV
Sbjct: 301 FPRRAENRKDVKTLIVEMLEAAKPQV 326

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BLAST of Lcy04g007580 vs. ExPASy TrEMBL
Match: A0A6J1DSV5 (glutamyl-tRNA reductase-binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023183 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 2.8e-156
Identity = 290/326 (88.96%), Postives = 302/326 (92.64%), Query Frame = 0


Query: 1   MATVAPPSLTFQFRSRTALNGRFPFHFPRSLTLSFNPRLRLRLPFSMAASTESTSQTVAS 60
           MATVAPPSL F+FRS TA NGR   HFPRS T  FNP    R PFSMAASTESTSQTVAS
Sbjct: 1   MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNP----RTPFSMAASTESTSQTVAS 60

Query: 61  GDDANSDEIDVSKLIQDHQEKAARLLPAEEIRTLLDQSVRGMLSTFSQSFEGYPSGSFVD 120
           G DANS+EID+SKLIQ HQE AARL PAEEIRTLLDQSVRGMLSTFS+SFEGYPSGS VD
Sbjct: 61  G-DANSNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVD 120

Query: 121 FACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLMVTLHGDAVAVSEEDRP 180
           FACDADGTP+LAVSSLAEHAKNLATNPKCSLLVAK+PEDRGTL+VTLHGD V+VSEEDRP
Sbjct: 121 FACDADGTPVLAVSSLAEHAKNLATNPKCSLLVAKQPEDRGTLVVTLHGDVVSVSEEDRP 180

Query: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVVRYVSGVATASLGSGELSSEEYKAAQVDPV 240
           AVRAAYLSKHPNAFWVDFGDFQFVYIKPKV+RYVSGVATASLGSGELS EEYKAA+VDP+
Sbjct: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPI 240

Query: 241 AQFSKPVTSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGSSFKLRVP 300
           AQFSKPVTSHMNRDHTEDTK+IVRHWTSIPVDSAIMLDLDSLG NVKASYQG SFKLRVP
Sbjct: 241 AQFSKPVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVKASYQGDSFKLRVP 300

Query: 301 FPRRAENRKDVKTLVVEMLEAAKPQV 327
           FPRRAENRKDVKTLVVEMLEAAKP V
Sbjct: 301 FPRRAENRKDVKTLVVEMLEAAKPHV 321

[Close]

BLAST of Lcy04g007580 vs. ExPASy TrEMBL
Match: A0A0A0KZZ8 (DUF2470 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G192090 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 4.9e-153
Identity = 285/326 (87.42%), Postives = 299/326 (91.72%), Query Frame = 0


Query: 1   MATVAPPSLTFQFRSRTALNGRFPFHFPRSLTLSFNPRLRLRLPFSMAASTESTSQTVAS 60
           MATV PP+LTF+  S TALNGR  FHF RSLT SFN RLRL LP SMAAST+STSQ  A 
Sbjct: 1   MATVTPPTLTFRIPSPTALNGRISFHFSRSLTSSFNLRLRLPLPLSMAASTDSTSQ--AP 60

Query: 61  GDDANSDEIDVSKLIQDHQEKAARLLPAEEIRTLLDQSVRGMLSTFSQSFEGYPSGSFVD 120
              ANSD+IDVSKLIQ HQEKAARL P EEIRTLLDQSVRG LSTFS+SFEGYPSGSFVD
Sbjct: 61  SGYANSDDIDVSKLIQAHQEKAARLSPVEEIRTLLDQSVRGTLSTFSRSFEGYPSGSFVD 120

Query: 121 FACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLMVTLHGDAVAVSEEDRP 180
           FACDADGTPILAVSSLAEHAKNL TNPKCSLLVAKEPEDRGTL+VTLHGDAVAVSEEDRP
Sbjct: 121 FACDADGTPILAVSSLAEHAKNLETNPKCSLLVAKEPEDRGTLVVTLHGDAVAVSEEDRP 180

Query: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVVRYVSGVATASLGSGELSSEEYKAAQVDPV 240
           AVRAAYLSKHPNAFWVDFGDF FVYIKPKV+RYVSG+ATASLGSGELSSEEY AAQVDP+
Sbjct: 181 AVRAAYLSKHPNAFWVDFGDFNFVYIKPKVIRYVSGIATASLGSGELSSEEYMAAQVDPI 240

Query: 241 AQFSKPVTSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGSSFKLRVP 300
           AQF+KPVTSHMNRDH EDTK IVRHWTSIPVDSAIMLDLDSLGFNVKA Y+G+SFKLRVP
Sbjct: 241 AQFAKPVTSHMNRDHAEDTKNIVRHWTSIPVDSAIMLDLDSLGFNVKADYRGTSFKLRVP 300

Query: 301 FPRRAENRKDVKTLVVEMLEAAKPQV 327
           FPRRAE+RKDVKTLVVEM+EAAKPQV
Sbjct: 301 FPRRAESRKDVKTLVVEMVEAAKPQV 324

[Close]

BLAST of Lcy04g007580 vs. ExPASy TrEMBL
Match: A0A6J1GD74 (glutamyl-tRNA reductase-binding protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453115 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 6.4e-153
Identity = 291/327 (88.99%), Postives = 300/327 (91.74%), Query Frame = 0


Query: 1   MATVAPPSLTFQFRSRTALNGRFPFHFPRSLTLSFNPRLRLRLPFSMAASTESTSQTVAS 60
           MATV P SLT +F SRTALNGR   HFPRSL  SFNP  RLRL FSMAASTEST + VAS
Sbjct: 1   MATVVPHSLTLRFCSRTALNGRIASHFPRSLICSFNP--RLRLSFSMAASTESTPKIVAS 60

Query: 61  GDDANSDEIDVSKLIQDHQEKAAR--LLPAEEIRTLLDQSVRGMLSTFSQSFEGYPSGSF 120
           G DANS+EIDVSKLIQ HQEKAAR  L PAEEIRTL+DQ VRGMLSTFS+ FEGYPSGSF
Sbjct: 61  G-DANSEEIDVSKLIQAHQEKAARFSLSPAEEIRTLMDQRVRGMLSTFSRRFEGYPSGSF 120

Query: 121 VDFACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLMVTLHGDAVAVSEED 180
           VDFACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTL+VTLHGDAVAV EED
Sbjct: 121 VDFACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTLHGDAVAVPEED 180

Query: 181 RPAVRAAYLSKHPNAFWVDFGDFQFVYIKPKVVRYVSGVATASLGSGELSSEEYKAAQVD 240
           RPAVRAAYLSKHP+AFWVDFGDFQFVYIKPKV+RYVSGVATASL SGELS EEYKAAQVD
Sbjct: 181 RPAVRAAYLSKHPHAFWVDFGDFQFVYIKPKVIRYVSGVATASLASGELSDEEYKAAQVD 240

Query: 241 PVAQFSKPVTSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGSSFKLR 300
           PVAQFSKPVTSHMNRDH EDTK IVRHWTSIPVDSAIMLDLDSLGFNV+A YQGSSFKLR
Sbjct: 241 PVAQFSKPVTSHMNRDHGEDTKNIVRHWTSIPVDSAIMLDLDSLGFNVEAGYQGSSFKLR 300

Query: 301 VPFPRRAENRKDVKTLVVEMLEAAKPQ 326
           VPFPRRAENRKDVKTLVVEMLEAAKPQ
Sbjct: 301 VPFPRRAENRKDVKTLVVEMLEAAKPQ 324

[Close]

BLAST of Lcy04g007580 vs. NCBI nr
Match: XP_022925000.1 (glutamyl-tRNA reductase-binding protein, chloroplastic [Cucurbita moschata])

HSP 1 Score: 595.9 bits (1535), Expect = 2.1e-166
Identity = 302/326 (92.64%), Postives = 311/326 (95.40%), Query Frame = 0


Query: 1   MATVAPPSLTFQFRSRTALNGRFPFHFPRSLTLSFNPRLRLRLPFSMAASTESTSQTVAS 60
           MATV PPSLTFQFRSR   NGR  FHFPRSL  SFNPRLR RLPFSMAASTESTSQ VAS
Sbjct: 1   MATVTPPSLTFQFRSRNTFNGRIGFHFPRSLASSFNPRLRFRLPFSMAASTESTSQAVAS 60

Query: 61  GDDANSDEIDVSKLIQDHQEKAARLLPAEEIRTLLDQSVRGMLSTFSQSFEGYPSGSFVD 120
           GDDANSDEIDVSKLIQ HQEKAARLLPAEEIRTLLDQSVRGMLSTFS+SFEGYPSGSFVD
Sbjct: 61  GDDANSDEIDVSKLIQAHQEKAARLLPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSFVD 120

Query: 121 FACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLMVTLHGDAVAVSEEDRP 180
           FACDADGTPILAVSSLAEHAKNLA NPKCSLLVAKEPEDRGTL+VT+HGDAV VSEEDRP
Sbjct: 121 FACDADGTPILAVSSLAEHAKNLAANPKCSLLVAKEPEDRGTLVVTVHGDAVPVSEEDRP 180

Query: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVVRYVSGVATASLGSGELSSEEYKAAQVDPV 240
           AVRAAYLSKHPNAFWVDFGDFQFVYIKPKV+RYVSGVATASLGSGELSSEEYKAAQVDP+
Sbjct: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSSEEYKAAQVDPI 240

Query: 241 AQFSKPVTSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGSSFKLRVP 300
            QF+KPV SHMNRDHTEDTKMIVRHW+SIPVDSAIMLDLDSLGFNVKASYQG+SFKLRVP
Sbjct: 241 VQFAKPVMSHMNRDHTEDTKMIVRHWSSIPVDSAIMLDLDSLGFNVKASYQGNSFKLRVP 300

Query: 301 FPRRAENRKDVKTLVVEMLEAAKPQV 327
           FPRRAENRKDVKTL+VEMLEAAKPQV
Sbjct: 301 FPRRAENRKDVKTLIVEMLEAAKPQV 326

[Close]

BLAST of Lcy04g007580 vs. NCBI nr
Match: XP_023517122.1 (glutamyl-tRNA reductase-binding protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 592.4 bits (1526), Expect = 2.3e-165
Identity = 300/326 (92.02%), Postives = 309/326 (94.79%), Query Frame = 0


Query: 1   MATVAPPSLTFQFRSRTALNGRFPFHFPRSLTLSFNPRLRLRLPFSMAASTESTSQTVAS 60
           MAT  PPSLTFQFRSR   NGR  FHFPRSL  SFNPRLR RLPF M+ASTESTSQ VAS
Sbjct: 1   MATATPPSLTFQFRSRNTFNGRIGFHFPRSLASSFNPRLRFRLPFLMSASTESTSQAVAS 60

Query: 61  GDDANSDEIDVSKLIQDHQEKAARLLPAEEIRTLLDQSVRGMLSTFSQSFEGYPSGSFVD 120
           GDDANSDEIDVSKLIQ HQEKAARLLPAEEIRTLLDQSVRGMLSTFS+SFEGYPSGSFVD
Sbjct: 61  GDDANSDEIDVSKLIQAHQEKAARLLPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSFVD 120

Query: 121 FACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLMVTLHGDAVAVSEEDRP 180
           FACDADGTPILAVSSLAEHAKNLA NPKCSLLVAKEPEDRGTL+VT+HGDAV VSEEDRP
Sbjct: 121 FACDADGTPILAVSSLAEHAKNLAANPKCSLLVAKEPEDRGTLVVTVHGDAVPVSEEDRP 180

Query: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVVRYVSGVATASLGSGELSSEEYKAAQVDPV 240
           AVRAAYLSKHPNAFWVDFGDFQFVYIKPKV+RYVSGVATASLGSGELSSEEYKAAQVDP+
Sbjct: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSSEEYKAAQVDPI 240

Query: 241 AQFSKPVTSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGSSFKLRVP 300
            QF+KPV SHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQG+SFKLRVP
Sbjct: 241 VQFAKPVMSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGNSFKLRVP 300

Query: 301 FPRRAENRKDVKTLVVEMLEAAKPQV 327
           FPRRAENRKDVKTL+VEMLEAAKPQV
Sbjct: 301 FPRRAENRKDVKTLIVEMLEAAKPQV 326

[Close]

BLAST of Lcy04g007580 vs. NCBI nr
Match: XP_022966392.1 (glutamyl-tRNA reductase-binding protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 590.5 bits (1521), Expect = 8.9e-165
Identity = 299/326 (91.72%), Postives = 309/326 (94.79%), Query Frame = 0


Query: 1   MATVAPPSLTFQFRSRTALNGRFPFHFPRSLTLSFNPRLRLRLPFSMAASTESTSQTVAS 60
           MATV PPSLTFQFR R   NGR  F FPRSL  SFNPRLR RLPF M+ASTESTSQ VAS
Sbjct: 1   MATVTPPSLTFQFRPRNTFNGRIGFRFPRSLASSFNPRLRFRLPFLMSASTESTSQAVAS 60

Query: 61  GDDANSDEIDVSKLIQDHQEKAARLLPAEEIRTLLDQSVRGMLSTFSQSFEGYPSGSFVD 120
           GDDANSDEID+SKLIQ HQEKAARLLPAEEIRTLLDQSVRGMLSTFS+SFEGYPSGSFVD
Sbjct: 61  GDDANSDEIDISKLIQAHQEKAARLLPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSFVD 120

Query: 121 FACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLMVTLHGDAVAVSEEDRP 180
           FACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTL+VT+HGDAV VSEEDRP
Sbjct: 121 FACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTVHGDAVPVSEEDRP 180

Query: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVVRYVSGVATASLGSGELSSEEYKAAQVDPV 240
           AVRAAYLSKHPNAFWVDFGDFQFVYIKPKV+RYVSGVATASLGSGELSSEEYKA QVDP+
Sbjct: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSSEEYKATQVDPI 240

Query: 241 AQFSKPVTSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGSSFKLRVP 300
           AQF+KPV SHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQG+SFKLRVP
Sbjct: 241 AQFAKPVMSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGNSFKLRVP 300

Query: 301 FPRRAENRKDVKTLVVEMLEAAKPQV 327
           FPRRAENRKDVKTL+VEMLEAAKPQV
Sbjct: 301 FPRRAENRKDVKTLIVEMLEAAKPQV 326

[Close]

BLAST of Lcy04g007580 vs. NCBI nr
Match: KAG6595502.1 (hypothetical protein SDJN03_12055, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 587.0 bits (1512), Expect = 9.8e-164
Identity = 300/326 (92.02%), Postives = 308/326 (94.48%), Query Frame = 0


Query: 1   MATVAPPSLTFQFRSRTALNGRFPFHFPRSLTLSFNPRLRLRLPFSMAASTESTSQTVAS 60
           MATV PPSLTFQF SR   NGR  FHFP SL  SFNPRLR RLPFSMAASTESTSQ VAS
Sbjct: 1   MATVTPPSLTFQFCSRNTFNGRIGFHFPCSLASSFNPRLRFRLPFSMAASTESTSQAVAS 60

Query: 61  GDDANSDEIDVSKLIQDHQEKAARLLPAEEIRTLLDQSVRGMLSTFSQSFEGYPSGSFVD 120
           GDDANSDEIDVSKLIQ HQEKAARLLPAEEIR LLDQSVRGMLSTFS+SFEGYPSGSFVD
Sbjct: 61  GDDANSDEIDVSKLIQAHQEKAARLLPAEEIRALLDQSVRGMLSTFSRSFEGYPSGSFVD 120

Query: 121 FACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLMVTLHGDAVAVSEEDRP 180
           FACDADGTPILAVSSLAEHAKNLA NPKCSLLVAKEPEDRGTL+VT+HGDAV VSEEDRP
Sbjct: 121 FACDADGTPILAVSSLAEHAKNLAANPKCSLLVAKEPEDRGTLVVTVHGDAVPVSEEDRP 180

Query: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVVRYVSGVATASLGSGELSSEEYKAAQVDPV 240
           AVRAAYLSKHPNAFWVDFGDFQFVYIK KV+RYVSGVATASLGSGELSSEEYKAAQVDP+
Sbjct: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKLKVIRYVSGVATASLGSGELSSEEYKAAQVDPI 240

Query: 241 AQFSKPVTSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGSSFKLRVP 300
           AQF+KPV SHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQG+SFKLRVP
Sbjct: 241 AQFAKPVMSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGNSFKLRVP 300

Query: 301 FPRRAENRKDVKTLVVEMLEAAKPQV 327
           FPRRAENRKDVKTL+VEMLEAAKPQV
Sbjct: 301 FPRRAENRKDVKTLIVEMLEAAKPQV 326

[Close]

BLAST of Lcy04g007580 vs. NCBI nr
Match: KAG7027488.1 (hypothetical protein SDJN02_11501 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 583.6 bits (1503), Expect = 1.1e-162
Identity = 303/337 (89.91%), Postives = 310/337 (91.99%), Query Frame = 0


Query: 1   MATVAPPSLTFQFRSRTALNGRFPFHFPRSLTLSFNPRLRLRLPFSMAASTESTSQTVAS 60
           MATV PPSLTFQF SR  LNGR  FHFP SL  SFNPRLR RLPFSMAASTESTSQ VAS
Sbjct: 1   MATVTPPSLTFQFCSRNTLNGRIGFHFPCSLASSFNPRLRFRLPFSMAASTESTSQAVAS 60

Query: 61  GDDANSDEIDVSKLIQDHQEKAARLLPAEEIRTLLDQSVRGMLSTFS-----------QS 120
           GDDANSDEIDVSKLIQ HQEKAARLLPAEEIRTLLDQSVRGMLSTFS           QS
Sbjct: 61  GDDANSDEIDVSKLIQAHQEKAARLLPAEEIRTLLDQSVRGMLSTFSRSLVVIRFAPVQS 120

Query: 121 FEGYPSGSFVDFACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLMVTLHG 180
           FEGYPSGSFVDFACDADGTPILAVSSLAEHAKNLA NPKCSLLVAKEPEDRGTL+VT+HG
Sbjct: 121 FEGYPSGSFVDFACDADGTPILAVSSLAEHAKNLAANPKCSLLVAKEPEDRGTLVVTVHG 180

Query: 181 DAVAVSEEDRPAVRAAYLSKHPNAFWVDFGDFQFVYIKPKVVRYVSGVATASLGSGELSS 240
           DAV VSEEDRPAVRAAYLSKHPNAFWVDFGDFQFVYIK KV+RYVSGVATASLGSGELSS
Sbjct: 181 DAVPVSEEDRPAVRAAYLSKHPNAFWVDFGDFQFVYIKLKVIRYVSGVATASLGSGELSS 240

Query: 241 EEYKAAQVDPVAQFSKPVTSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKAS 300
           EEYKAAQVDP+AQF+KPV SHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKAS
Sbjct: 241 EEYKAAQVDPIAQFAKPVMSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKAS 300

Query: 301 YQGSSFKLRVPFPRRAENRKDVKTLVVEMLEAAKPQV 327
           YQG+SFKLRVPFPRRAENRKDVKTL+VEMLEAAKPQV
Sbjct: 301 YQGNSFKLRVPFPRRAENRKDVKTLIVEMLEAAKPQV 337

[Close]

BLAST of Lcy04g007580 vs. TAIR 10
Match: AT3G03890.1 (FMN binding )

HSP 1 Score: 403.7 bits (1036), Expect = 1.4e-112
Identity = 207/291 (71.13%), Postives = 248/291 (85.22%), Query Frame = 0


Query: 33  LSFNPRLRLRLPFSMAASTESTSQTVASGDDANSDEIDVSKLIQDHQEKAARLLPAEEIR 92
           +SF+   R   P +MA++ +S+SQ V+ G   NSD  DV KLIQ H+EKAARL P EEIR
Sbjct: 31  VSFSTVRRRFSPLTMASAAQSSSQAVSYG-SGNSD-TDVFKLIQAHEEKAARLSPVEEIR 90

Query: 93  TLLDQSVRGMLSTFSQSFEGYPSGSFVDFACDADGTPILAVSSLAEHAKNLATNPKCSLL 152
           T+L+ S+ GMLSTFSQ +EGYPSGS VDFACDADG+PILAVSSLA H K+L  NPKCSLL
Sbjct: 91  TVLNGSICGMLSTFSQKYEGYPSGSMVDFACDADGSPILAVSSLAVHTKDLLANPKCSLL 150

Query: 153 VAKEPEDRGTLMVTLHGDAVAVSEEDRPAVRAAYLSKHPNAFWVDFGDFQFVYIKPKVVR 212
           +A++PEDR  L +TLHGDAV VSE+D+ AVR+AYL+KHP AFWVDFGDF F+ I+PKVVR
Sbjct: 151 IARDPEDRTGLRITLHGDAVLVSEKDQAAVRSAYLAKHPKAFWVDFGDFSFMRIEPKVVR 210

Query: 213 YVSGVATASLGSGELSSEEYKAAQVDPVAQFSKPVTSHMNRDHTEDTKMIVRHWTSIPVD 272
           YVSGVATA LGSGE S EEY+AA+VDP+AQ++KPVTSHMN+DH EDTK IV + TSIPV+
Sbjct: 211 YVSGVATAFLGSGEFSKEEYQAAKVDPIAQYAKPVTSHMNKDHEEDTKAIVHNITSIPVE 270

Query: 273 SAIMLDLDSLGFNVKASYQGSSFKLRVPFPRRAENRKDVKTLVVEMLEAAK 324
           SA+MLDLDSLGFNVKA+ QG++FKLRVPFPRRA++RKDVKTL+VEML+AAK
Sbjct: 271 SALMLDLDSLGFNVKATLQGNTFKLRVPFPRRAQDRKDVKTLIVEMLQAAK 319

[Close]

BLAST of Lcy04g007580 vs. TAIR 10
Match: AT3G03890.2 (FMN binding )

HSP 1 Score: 381.3 bits (978), Expect = 7.6e-106
Identity = 195/277 (70.40%), Postives = 234/277 (84.48%), Query Frame = 0


Query: 33  LSFNPRLRLRLPFSMAASTESTSQTVASGDDANSDEIDVSKLIQDHQEKAARLLPAEEIR 92
           +SF+   R   P +MA++ +S+SQ V+ G   NSD  DV KLIQ H+EKAARL P EEIR
Sbjct: 31  VSFSTVRRRFSPLTMASAAQSSSQAVSYG-SGNSD-TDVFKLIQAHEEKAARLSPVEEIR 90

Query: 93  TLLDQSVRGMLSTFSQSFEGYPSGSFVDFACDADGTPILAVSSLAEHAKNLATNPKCSLL 152
           T+L+ S+ GMLSTFSQ +EGYPSGS VDFACDADG+PILAVSSLA H K+L  NPKCSLL
Sbjct: 91  TVLNGSICGMLSTFSQKYEGYPSGSMVDFACDADGSPILAVSSLAVHTKDLLANPKCSLL 150

Query: 153 VAKEPEDRGTLMVTLHGDAVAVSEEDRPAVRAAYLSKHPNAFWVDFGDFQFVYIKPKVVR 212
           +A++PEDR  L +TLHGDAV VSE+D+ AVR+AYL+KHP AFWVDFGDF F+ I+PKVVR
Sbjct: 151 IARDPEDRTGLRITLHGDAVLVSEKDQAAVRSAYLAKHPKAFWVDFGDFSFMRIEPKVVR 210

Query: 213 YVSGVATASLGSGELSSEEYKAAQVDPVAQFSKPVTSHMNRDHTEDTKMIVRHWTSIPVD 272
           YVSGVATA LGSGE S EEY+AA+VDP+AQ++KPVTSHMN+DH EDTK IV + TSIPV+
Sbjct: 211 YVSGVATAFLGSGEFSKEEYQAAKVDPIAQYAKPVTSHMNKDHEEDTKAIVHNITSIPVE 270

Query: 273 SAIMLDLDSLGFNVKASYQGSSFKLRVPFPRRAENRK 310
           SA+MLDLDSLGFNVKA+ QG++FKLRVPFPRRA++RK
Sbjct: 271 SALMLDLDSLGFNVKATLQGNTFKLRVPFPRRAQDRK 305

[Close]

BLAST of Lcy04g007580 vs. TAIR 10
Match: AT3G21140.1 (Pyridoxamine 5'-phosphate oxidase family protein )

HSP 1 Score: 87.8 bits (216), Expect = 1.7e-17
Identity = 79/274 (28.83%), Postives = 131/274 (47.81%), Query Frame = 0


Query: 61  GDDANSDEIDVSKLIQDHQEKAARLLPAEEIRTLLDQSVRGMLSTFSQSF----EGYPSG 120
           G+ A      +S  +Q+     A   PA  +R LL+Q+    L T         EGYP G
Sbjct: 117 GNRAGLFRTPISGGVQNATSAHALPRPALAVRNLLEQARFAHLCTVMSKMHHRREGYPFG 176

Query: 121 SFVDFACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRG--TLMVTLHGDAVAV 180
           S VDFA D  G PI   S LA H +NL   P+CSL+V + P   G     VTL GD   +
Sbjct: 177 SLVDFAPDRMGHPIFLFSPLAIHTRNLLNEPRCSLVV-QIPGWSGLSNARVTLFGDVYPL 236

Query: 181 SEEDRPAVRAAYLSKHPNAFWVDFGDFQFVYIKP-KVVRYVSGVATASLGSGELSSEEYK 240
           SE+++      Y++KHP+     +G+F +  ++    + ++ G  T +     +  +EY+
Sbjct: 237 SEDEQEWAHKQYIAKHPHGPSEQWGNFHYFRMQNISDIYFIGGFGTVAW----VDVKEYE 296

Query: 241 AAQVDPVA-QFSKPVTSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQG 300
             Q D +A    +     +N   ++  + ++   T   VD A ++ +DS G +V+   QG
Sbjct: 297 GLQPDKIAVDGGERNLKELNAIFSKPLRELLS--TESEVDDAALISIDSKGIDVRVR-QG 356

Query: 301 SSFKL-RVPFP--RRAENRKDVKTLVVEMLEAAK 324
           + F + R+ F      E  ++ K+ + ++LE  K
Sbjct: 357 AQFNIQRLAFEEGHGVETLEEAKSALWKVLEKVK 382

[Close]

BLAST of Lcy04g007580 vs. TAIR 10
Match: AT1G51560.1 (Pyridoxamine 5'-phosphate oxidase family protein )

HSP 1 Score: 80.5 bits (197), Expect = 2.8e-15
Identity = 68/249 (27.31%), Postives = 117/249 (46.99%), Query Frame = 0


Query: 87  PAEEIRTLLDQSVRGMLSTFSQSF----EGYPSGSFVDFACDADGTPILAVSSLAEHAKN 146
           PA  +R L++Q+    L T         EGYP GS VDFA D  G PI + S LA H +N
Sbjct: 147 PALAVRNLMEQARFAHLCTVMSKMHHRREGYPFGSLVDFAPDPMGHPIFSFSPLAIHTRN 206

Query: 147 LATNPKCSLLVAKEP-EDRGTLMVTLHGDAVAVSEEDRPAVRAAYLSKH---PNAFWVDF 206
           +   P+C+L+V            VTL GD   + EE +      Y+ KH   P+  W +F
Sbjct: 207 ILAEPRCTLVVQIPGWSCLSNARVTLFGDVYPLPEEQQEWAHKQYMLKHHQGPSQQWGNF 266

Query: 207 GDFQFVYIKPKVVRYVSGVATASLGSGELSSEEYKAAQVDPVA-QFSKPVTSHMNRDHTE 266
             F+   I    + ++ G  T +     ++  EY+  Q D +A    +     +N   ++
Sbjct: 267 HYFRMQNISD--IYFIGGFGTVAW----INVNEYETLQPDKIAVDGGEQNLKELNAIFSK 326

Query: 267 DTKMIVRHWTSIPVDSAIMLDLDSLGFNVKASYQGSSFKL-RVPFPRR--AENRKDVKTL 324
             + ++   +   +D A ++ +DS G +++   QG+ FK+ R+ F      E  ++ K+ 
Sbjct: 327 PLRELLS--SEAELDDAAIISIDSKGIDIRVR-QGAQFKIQRLAFEESHGVETLEEAKSA 386

[Close]

BLAST of Lcy04g007580 vs. TAIR 10
Match: AT3G21200.1 (proton gradient regulation 7 )

HSP 1 Score: 62.8 bits (151), Expect = 6.0e-10
Identity = 56/235 (23.83%), Postives = 107/235 (45.53%), Query Frame = 0


Query: 87  PAEEIRTLLDQSVRGMLSTFSQSFEGYPSGSFVDFACDADGTPILAVSSLAEHAKNLATN 146
           PAE  R++++ S  G LST +   +G+P G  V FA D DGTP+L ++      ++++ +
Sbjct: 61  PAEVSRSIMELSSVGTLSTLTH--DGWPLGVGVRFAVDKDGTPVLCLN------RSVSPD 120

Query: 147 PKCSLLVAKEPEDRGTLMVTLHGDAVAVSEEDRPAVRAAYLSKHPNAFWVD-FG-----D 206
            + +L V  E     T   T+ G      ++         + K  +A W + FG     D
Sbjct: 121 KRSALHVQLEQCGLRTPQCTIQGSIGRPGDDT--------VLKRLSATWREKFGEEVKED 180

Query: 207 FQFVYIKPKVVRYVSGVATASLGSGELSSEEYKAAQVDPVAQFSKPVTSHMNRDHTEDTK 266
             +V    +V++    +         ++S +YK A  DP+   ++ + + +N ++ ED  
Sbjct: 181 SLYVVAVDRVLQMEDFMEDGIW----VASSDYKNASPDPLRDIAEDIVNQINANNMEDIF 240

Query: 267 MIVRHWTSIP--VDSAIMLDLDSLGFNVKASYQGSSFKLRVPFPRRAENRKDVKT 314
                +  +   V    M+ +D LGF+++       + +R+PFP    + K  K+
Sbjct: 241 RFCNVYVDLDFVVSETKMIWMDRLGFDLRVWSPRGVYDVRIPFPMEVTDEKGAKS 275

The following BLAST results are available for this feature:

BLAST of Lcy04g007580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU39	8.4e-09	23.83	Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Lcy04g007580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGN2	1.0e-166	92.64	glutamyl-tRNA reductase-binding protein, chloroplastic OS=Cucurbita moschata OX=...	[more]
A0A6J1HMU8	4.3e-165	91.72	glutamyl-tRNA reductase-binding protein, chloroplastic-like OS=Cucurbita maxima ...	[more]
A0A6J1DSV5	2.8e-156	88.96	glutamyl-tRNA reductase-binding protein, chloroplastic OS=Momordica charantia OX...	[more]
A0A0A0KZZ8	4.9e-153	87.42	DUF2470 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G192090 PE=...	[more]
A0A6J1GD74	6.4e-153	88.99	glutamyl-tRNA reductase-binding protein, chloroplastic-like OS=Cucurbita moschat...	[more]

BLAST of Lcy04g007580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925000.1	2.1e-166	92.64	glutamyl-tRNA reductase-binding protein, chloroplastic [Cucurbita moschata]	[more]
XP_023517122.1	2.3e-165	92.02	glutamyl-tRNA reductase-binding protein, chloroplastic-like [Cucurbita pepo subs...	[more]
XP_022966392.1	8.9e-165	91.72	glutamyl-tRNA reductase-binding protein, chloroplastic-like [Cucurbita maxima]	[more]
KAG6595502.1	9.8e-164	92.02	hypothetical protein SDJN03_12055, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7027488.1	1.1e-162	89.91	hypothetical protein SDJN02_11501 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lcy04g007580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03890.1	1.4e-112	71.13	FMN binding	[more]
AT3G03890.2	7.6e-106	70.40	FMN binding	[more]
AT3G21140.1	1.7e-17	28.83	Pyridoxamine 5'-phosphate oxidase family protein	[more]
AT1G51560.1	2.8e-15	27.31	Pyridoxamine 5'-phosphate oxidase family protein	[more]
AT3G21200.1	6.0e-10	23.83	proton gradient regulation 7	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037119	Haem oxygenase HugZ-like superfamily	GENE3D	3.20.180.10		coord: 237..326 e-value: 1.0E-24 score: 88.9
IPR012349	FMN-binding split barrel	GENE3D	2.30.110.10		coord: 64..225 e-value: 4.8E-38 score: 132.3
IPR019595	Domain of unknown function DUF2470	PFAM	PF10615	DUF2470	coord: 245..318 e-value: 1.4E-15 score: 57.7
None	No IPR available	PFAM	PF13883	Pyrid_oxidase_2	coord: 88..215 e-value: 2.5E-13 score: 50.3
None	No IPR available	PANTHER	PTHR13343	CREG1 PROTEIN	coord: 40..325
None	No IPR available	PANTHER	PTHR13343:SF24	OS07G0573800 PROTEIN	coord: 40..325
None	No IPR available	SUPERFAMILY	50475	FMN-binding split barrel	coord: 88..322

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g007580.1	Lcy04g007580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042167	heme catabolic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0020037	heme binding
molecular_function	GO:0042803	protein homodimerization activity