Lcy04g006250 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g006250
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr04: 35834638 .. 35843549 (+)
RNA-Seq ExpressionLcy04g006250
SyntenyLcy04g006250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAATCGCGATATTTCGGCGATATATCGCCGATATATCCAATTTCTCGAGGGTGCGATATGGATATGGGGGGGTAAGATCGTTTTTACCAAAATATCGTGGATATATCGAAAATATCACCGATATATCGTGGATATATCTTTTTGACGATATATCGGATGGAACCAATGAAAAACGCGGAGATTTGAAGATATATCGCGGAAAAATCGCGGATATATCAGTATAAAATCGCAGATATTTCGACCGAGAATCGAAGATAACCATTTAATAGGATCTTTTATATAACATGGGAAATTATGCTCCATTGGCTTGCTAGCACATTGTTGGTCGCTACCGCAAGCGCACGGTATCGCAAGTAATATAAAACGGAAAGTATTCCGAGTATCGAATCCTCAGGGAATTTGAATTATATCCATTACGTACCAAAAACCATCATGTTCAATTTTATTTAGAAGTCCAATCTCGAATGATAGAGCGAAAATTAGAGAAACTAATAAAAAGAAACATGCAACAACAAAATGGAAATAACCAATTAAGGGAACTTGACCTAGGGTGTTATCTAGCTTTCTTGGATTTGTAGCTCAATTACATGGATATATGCAATTAATAATCTTCAATTTCATAAATCTAGGAGTAATTTTAAGCGGAATTCTCTTTCAAGCTCCTCCGCATCTCATACTAACATAACTAATTCATGTGTCCATCTCCTTAGTTAATCATAGTATGGCACTAAGCAACTTCATTATCAATTTCTAACAATTCTTTTTCACTCTCGTGTTCCAAGCAATTATTAGCCATGCAATTTGGATCTAATCTAAATTCTCTCTGTCGAGTATTAATTTAGACCAACAAATCAATTAATCCGTGATCAAGAGATTAAAGGCATTAAGCAAATTGCATAGATGAAATATGAAGAAATTCATTACATAATCCAAGTAATTGTGCTACAATATCCAATTAACTAGAATAACGACCCTAGGTCTCAAGATCTACTCACAATTGGAAATAATTTTGCCAAAATGATCTTGATCCATAGACCTAACTCAAATTAAAATAAGAAATTACAAAGAAGTAAGGAAGAAATAACCGATAAGTTGATCCCAAGCTCCCGTCACGAGCATCTCGAATCCGAGCCTTGGAATCTCGCTCAATTCCTCCTTTTTCCTCACAATTCTTCTCACTTTTTCTCTCTATTGAGCTAGGGGAGAGCTCCCCAAGATGGGATGATAATAACCAAAGGAAAGGAGGCTATTTATAGGAGCTGAAACGGACATTTCTTGCTGCCCAAGACGCACAGCGTCGAGACGCTGTGACGTCAGGTTTTCTTGGAGCAGAAGTTGTCGCAACGTCGAGACGCTGCGCGGACAGCGTCGCGACGCTACCGCGATTCTGGATTTTTCCTCGTTGATCACCTAGCGTCGAGACGCTCTAGTCCTAGCGTCTCGACGCTAGGCCTTCTAGAAGCCTTAAACACGGATTTTTGCCTCCTTTCTTCTTTCTTTTGGGCTTTTTGGGCCTCCACTTCAAATGTTCTCTTTTCTTTTCTTCTTTTATGGCCCAAAGTCTTCTTTTTATACCCAAAATTGGTAAAATTCTTGGTTTTGCTTCCCGAACTCGGTTTTCTACAAAATCAACATAAAAATACATTAAAGCTCACAATTCATGCACAAAACTAGCTAAAATTAATAGGAAAATGATGACATTTTTGGCTACACCATAATTAGTGGATCGGTTCTTTCTGCTCTTCATGGTGAAAAATTCTCTGATGTTTGATTATATAGTAGCACAGTTGGAGCATTATAGTATGTTGCACTTACCTAAAATTGCTTATAGTGTGAACAAAGTATGTCAGTTATGCACTCTCCAACTATTTTTCATTGATAGGCAGTCAAGCGTATAATTTGGTATCTAAGTGGAACATTGGATCATAGTTTGTTTTTTTTGTAAACCAACTGACTTGTTATTACTGGGATATGCTGATGCAAATTGGGCGTCCGATCCTGATGACAGGAAATCCACCTTTGGTTTTTGTATATATTTTGGAGGAAATTTAATACAATGGTCTTCAAAGAAGCAGAGTATTATTTCACAATCAAGTACTGAAGCCGAATATCAAAGTCTGGCTCATGTTTCTACTGATTTAGTGTTTTGTGATTTGCATATTACTCTTGCTCATCCTCCGACCTTGTGGTGTGATAATCTTAGTGTAGTGCATCTTATGCTAATCCTTTTATGCATTCGAGGACCAAACATGTTGAGATTGACATTTATTTTGTTAGAGATCTTGTCCTAAAGAAACAACTTCGAGTGTGTCACTTACCAACAATGTATTAAATTTCCATCGACATTTCCACATGTCCATGGATTCAACATCGATATGAGGGATGAATTGACATTTCCATTCTATCGTAAAATAATCTATAAAATATAAAGAAAATAGTAAATAAATGTAACTAGTGTAGAGATAATATTAATAATAAGTATTTTAACTCATTTTGAAAATGTTGAATATTTATTTATTAATTCAATTATTATATTTTATTTTTTTGTTTGAAATATTTTTATAGAAATATCGGTTGACATTTTATTAATATTTTCATCGATATTGCTATAAAATTGGGACATCGACATTTTAACCCTTGCTTACCAGCCACTGCACAGATAGCAAATATCTTTACTAAACCATTGTCAGCTTCCAAATTTCTTCCTTTAAAGAACAAGCTCAATGTGCTGTCTTCTACATCCATGGGGGTAGCAAGCCCATCGATTAAAGAGTTAATTAGTTAGAATGTGTTATTAGTTACAACTATTCTTGTTTCTTCTGAAATTCAGTTGTAACTTCAATTATTTTGTATTCACAGATTGCTCTTAAATAAGGCGCTTTGATCACTAATAAATGCAAGATTCATTTGTGATCATCTATCTAAGTTCTTGGATTTTCTTGTTATTAGAACTTTATCATTAGTAAAGTATAGCAAGCATGACAACCTCTGAATGAGTTATAATTTGGCTAGGTTGGATAAGATAATAAAAAGACTAACCTAATCCGTAGAAACCATATTTGGAATGCGTTCGACGTCACTCCAATCCCAAGTAGCACTTTTATTTTTCCTTCAATCCTTCAAACATTAGTTCTCCCATATTCTCCTTCATAAATTCACATTAGTTCCTCCTTATAAATCATTCTCAAAATCTATAGGTTAGTCTCAATAACCACATTCGTTCATAAATTTTGATGAGAAATCACGCTTTCATTGAGATAAAATGAAAGAATACAAGAGGGCATACAAAAAACAAGCCCAACAAAAAACACCCGCCAAAACTACAGGAATGGGTCCCATTCTAAGAGAATTAAACCAAGCTGATAATTACAAAAAAATTTAGAACCAGAAGCCCACAAAGACGAGTTAAATCTAATCGTCTCCCAAAGCTCAAACAAGGACTTCTCCACTCCCCTAAAGATTCTACTATTCCTCTCAAGCCAAATACCCCACAAAATAGCAAAAAAGCAAGCCTGCCAAAGGATTCTCCCTTTGTCACGGAAAGGGGGATGCCAAAGAACTTCCTCAAAAAAAGAGGAACAATCAAAATTAGGAGCTGAAGCAACCCCAAAAGATCTGAAAAACAGATTCCAAATCGAGCAGGCAAACTGACAATCCCAAAGTAAACTGACGTTCGTTCATAAATTCAATATCAATATTGATATTGATAACTCAAATTTATGGTTATATCAATGGATATGTGGATATTGACGAATATGGTGAGAAAATCACAGATATCATGAAAAATTATAGAAATTTTGGGAATTTTTAAATTGATTTTAACACTACCAAAGGACCCCACACTCTACTATCTTTCTTCCTTTTGGGCCATCCTTTCAGAGATACAAAGGAAATTCTTTGGCAGAATTTGGTTCGGGCGTTCTTATGGTCGGTTTGGATCGAAAGAAACCATAGAATTTTTGAGTCAAAAGAAAAGTCATATCCGATCCGATCTTCTTTGAAAATGTTAGGTTCCTTGCTTTATCTTGGTGTAAACTGAATCCACTTTTTTCCTCTTATAATATCTCTACACTTTTGACCAATTGGAGATGTTTAATGTAACTCCTTTGGTTTGGGGCTTTCTCTCCCCCTTTTTTTTTTTTTTTTGTAAATTTCATACATCAATGAAATTGTTTCTTATAAAAAAAAAGATTAACACTAGCTTATTTAAATTGTAACTATAATTTTAGGCACATATAAAACTTAAAGTCAAACATGTGCATTATTATAATAATAGATACTAATGAATGTAGATAAATGAACAAGAATTAGATCGATTCTTTGATAAATAGACATGTTAGTACAAACAAATGCATCATTTAGTGATAATAACAAAAAAATTAATAAATAATTAAACAATTTGATATTATTTAGTAGAAAGAGAGAAATAAATAATAAATTTTAGAATTTATAAAATAAAGGTGATTATGTCCGTTAGAGATGAGAAGCAATAATTATATAAAATTATCTAAAGAATAATATATTATATAATTTAATTAAAAGATATTATTGAAAAATTTAAAATTTTGAAATAAAAAGAAAAAGGTAATAAGAGAAATAGGGAGAGAAATAATGATAAAAATATGTGAAGTAATATAAAATATGAAAAAGGAAAAACAGAGAGGAGATATAGGTGGCGTGAGGTGATTCTTAAAAAACAAATAATAAAGTGGCATGAGGTGATTCTTAAAAAAGCAAATAATAAAGTGGCATGAGGAGAAGGACAAGGAGAAGTAGAGGGAACTCAGGAAGAGAGAAAGATGAGGATGAGAAGGGAGTTTGGAGTGGATTGCAATTGTCCCACATCATAAACTTGCAATTCAGCTTCTGGAACAGATATGGGAGTTGGCTTAGAAGAATGGATGTGATTTTGGACTTTGAGGAGCTTGTGATGAAATATTTGTAGGAAATTGAGGAATGCAATCCCAATTCTGTGATTCAAGATCATAATGCTCCTCTTTAATTTGCAAAATTTGGTAAATATTGACTATTTTGAAAGAAAGTGACATCTATGCTATTTGGATTCCTTCCTATTTGGTGAGTGCCCCAGAAAGGTGCATTTCATGGATTGGGCATCACGTTTACTCTTATGTCTTGGATAGATATGAATGCAGTACAATCAAATATTTTTGGGGGTAGTTGAGACACAAGATGAGATATTGTAGGGTGAGAAGACTTTATAAGAGTGGTGAACTTAAGAATGCGGGAGGCAGGTGGTTTATGAGATAAGTGGCCGAGAGAACTGTTTCACCCCATAAAAGTTTTGGGATATGTGAATTGAACATTAATAATTGGGCTATGTCAATAAGGTGATGATTTTTGCTTTCAACCACACCATTTTGTTGAGGTGTGTCGAAACAAGAACTTTAGTGTACAACACCATGAGATTGAAGATAAGGTCCAAGGGTAGGGTTGAAGAAATCACGAGCATTATTAGTTTCAAGCACTTTCATATTGACTTGAAATTCATTTTGAACCAATTTATGAAAAACTTGAAATAACTTACTAGTTTTATCTTTCGTAAGGAATGTCCAACTCAAACGAGTGCAATCATCAACTAAGAGGAGAAACCATGCCTCAATGACATATTTTACCTTGAAGGTCTCCAAATGTCTCCATGGATAAGGGAAAAAACTTTGGATGACATAAGAGGGTGAGGAGAAAAATGTGTGTTTGGAGAGTTGGCCTACGTCATGTTGAAATAATTTGCTCTTTTTATCGAAGAGGGAAATAGATGCTCAAAATACGCAAAATTTGGATGACCTAGGCGACAGTGCCACAACATGACTAAGCTATACATGGACTGACTATTAGATTGAACTACAAGTTTATTGCATTCTTGTGTTGTTGGAGGATTATCAAGTTTGAGATGATACAATCTTGCACATAATTCAACATTGCCAACAATCTTCCCTGGTCCCAGGTCCTGAAAAACACGAGTTTACAGGAAACTTAGTTTCACAGTTTAAATCCTTATTCAGCTTATTGACAGATGGTATATTGCACTCCAAATTTGGCACAAACACTCCTGAGTCAAATGTCAAGGAACTTGATACTTGAGAACACTCCCAATCCCAGTTACTCTATTAAGAGTACCATAAAAAATTCAAACAAAAAGATCACCCTTATAAGGGGAAAATGTTGAGAATAAGGATCTATCATCTGTCATGTGATATGAGGCTCTAGAGTACATCCATTCTGATGTGAGTTTTTGAGTATGAAGAGCTTGGAGATTTTTGTTACCTTGTTACTCCCAGAACCACTGGCAGCTGCAGTCTTTTCTTTGTTTTAACAATTTCTGTAGCATTTCTTATATGTCCTTGGTTGTAGTGTCAGAGAAAACAACATCGCCTCTAGTTTCTCAATCAGAAGTGACATGATTTGGTTCCTGTTTGCTGGTTTTCCACGGATTTTTCAACAGGTGTTTTTAACATGTCCTCATTTCCAACAGTGGTCACACCATGGTTCTCCTCTACGAGGCTTACTATCTCCATGTGACTGAAAACTTCCCCAAAGCTACTAGAGCTACCATATCATTTTGGTGATCTGAGTGAGCAATGATGACATATCCATTTTGAGCAAGAGGATCTTCGGTTGGCCCCAACATTACTTTTTTCCGTCTTTCTTCCCTATGAGCCTTAGAAAACACCTCTTGAAGACTAGGTAGTGGCTTCGTACCAAGAATTCGACCATGGACTTCATGAACAAATTTATTAAGGCCAATAAGAAATTTGAAGATCCTTCTTTTTGTAGTTCGCCTCTTCCTTTTGTGGGTTTTTTTGTTTATGTCCTATTATTTCATTTTTTTTTTCTCGATGAAAGTTTCATTATTCATAAAAAAAGAAAAATGTAAAGATTCTTTTTGTCTCCCCAATTTTGCAGAAGAGAGATCCTCAAAACATTTTCATTTATAAGTTTCAAAAAAGTCAAGTTGTTGCCAATAACGAGATAAAGTGGTGTAATAAGTAGTTACCAATGATTCCCCTTGTTTAAGATCTTGGGGGCTGTTGGGGCGCTGAGTTGGTTATAATAGTTGGGGGTTATAATAGTCTGTGTTTGGGGTGCAAATTATTATAGTCTGGGATAAAATAGTCTGTGTTTGGGGTGCAGATTATTTTAGTCTGGCATAAAATAGTTTGTGTTTGGGATGCAAATTATTTCAGTCTGAGTTAAAATAGTTTGTGTTTGGAGTGTTGATCTGTTTAACATGGGGTTCTAATCAAAGGTTCAAGTTGACTGTTTTTTTTCCTGACTTTTTTGTTTATTTTCCTCATACAACTTTGTATGTCAAATATCATATTTTGCAAATATAAAAAAAAATGTTTTGGTTTAGTTGTAAAAAAAAATAAAATTTTGGGTATAGGGGTTAAATTATGTGTTTAACTTAAAAGGAAACAAAAATGACCTAAGGTAAGAGTTGATTTTCTTTGTGTTAAATTCGTGGTTTTTTCACAAAATAAGTCATTTTATGATTTCATATAGAAAAACCATATTTGTTTCATTTTTGTATTTCCAACATAAAAATGGTAAATACTTATTGAAAACTCATTTTACCTTCGTTATCAAAAGAATCAAATAAAATAGAAAACACATAAAATAAAAACTTGAGTAGTATTTTCTTTTTTAATTATTACTATCACAGTAAACTTGAATACGATAAAGGGGGAAGGGTTACTTTGGCCCAATCGGTCCTTAACAACCTCCCAATATACTTCTCCCTCCTTAAAGCCCCTATTGTGGTGATTAAGAAGTTAGAAAAGCTTACGAGAGACTTTATTTGGAATGGTGGCCATTATAAACCTGTTTGCAACCTTGTTAAATGGGAGTGGACAGTGTTGCCTACTTCCCATGGAGGTATTGGAGTGGGAGCTTTAGGCTTACGAAATACTGCCCTGTTAACCAAGTGGCTTTGGAGATTTGCCCACGAGAGAGAAGGCATCTGGAGGAGGGTTATTGGTAGCATTTATGGGACTGATAGTCTTGGTTGGAGAACAATAACTCTTCCTAAGAAAATGGGCAGAAGATTTTGGCCAAACATTCAGAGGAACTATGATAGTTTTGAGAAATTTACCAAATTCCAGATTAGCTATGGGAATAGAATAAGGTTCTGGAGTGATGCTTGGTGTGATATGCAGCCCCTTAAAGTTGTCTTCCCTGATTTATTCGAGATCTCCCATAAGAAATCTGCTTCTGTTGCAGAATGCTGGGAGGACAGCACCCAAACGTGGAACCTTGGCCTTCGAAGAGGGCTTTTTGACCGTGAGCTGAGTAGTTGGGTGGCCCTCATTGGCAAGTTAGACAACATCCGTATGGGACATGAGATGGACAAAATCACCTGGAAGTTGGAAGGCTCGGGGCTCTTTACTACTAAATCTTGGTTCAGCAGGTCGGTTGGTAAATCCCCCAAGATTAATCTGTCTCTTGCGGGCAAGATCTGGAAACACCAGTCTCCTAAGAAAGTGAAAATCTTCCTTTGGAGTGTGGCTTATAGAAGCTTGAACACGGATGACAAAGTGCAAAGAAAGATGAAAAACTGGGTTCTATCCCCCTCGGGGTGCAGTCTTTGTTTAAAGGAGAGTGAGGATATCGATCACATTCTGTTACATTGTGAGTTTGCCACCAAGACTTGGAACTTCATTGCTGGTTTGTTGGGGCTAGCTTTCTATTTACCTAAAAAGGTGGATGATTGGCTCGAAGAAGGGTTGCAAGCTTGGAATTTGAGAAAGAAGGCCAAGGTGATAGCGGGCTGTGCGTTTAGAGCTTCCATGTGGCTTTTATGGAAAGAAAGAAATGCTAGAACCTTTGGTGATAAGTCGTCTTCTTTTGATTCTTTTTGTAATTCTGTACAAAATACGACCTCTTGGTGA

mRNA sequence

ATGAAAAAATCGCGATATTTCGGCGATATATCGCCGATATATCCAATTTCTCGAGGGTGCGATATGGATATGGGGGGTAAACTTGAATACGATAAAGGGGGAAGGGTTACTTTGGCCCAATCGGTCCTTAACAACCTCCCAATATACTTCTCCCTCCTTAAAGCCCCTATTGTGGTGATTAAGAAGTTAGAAAAGCTTACGAGAGACTTTATTTGGAATGGTGGCCATTATAAACCTGTTTGCAACCTTGTTAAATGGGAGTGGACAGTGTTGCCTACTTCCCATGGAGGTATTGGAGTGGGAGCTTTAGGCTTACGAAATACTGCCCTGTTAACCAAGTGGCTTTGGAGATTTGCCCACGAGAGAGAAGGCATCTGGAGGAGGGTTATTGGTAGCATTTATGGGACTGATAGTCTTGGTTGGAGAACAATAACTCTTCCTAAGAAAATGGGCAGAAGATTTTGGCCAAACATTCAGAGGAACTATGATAGTTTTGAGAAATTTACCAAATTCCAGATTAGCTATGGGAATAGAATAAGGTTCTGGAGTGATGCTTGGTGTGATATGCAGCCCCTTAAAGTTGTCTTCCCTGATTTATTCGAGATCTCCCATAAGAAATCTGCTTCTGTTGCAGAATGCTGGGAGGACAGCACCCAAACGTGGAACCTTGGCCTTCGAAGAGGGCTTTTTGACCGTGAGCTGAGTAGTTGGGTGGCCCTCATTGGCAAGTTAGACAACATCCGTATGGGACATGAGATGGACAAAATCACCTGGAAGTTGGAAGGCTCGGGGCTCTTTACTACTAAATCTTGGTTCAGCAGGTCGGTTGGTAAATCCCCCAAGATTAATCTGTCTCTTGCGGGCAAGATCTGGAAACACCAGTCTCCTAAGAAAGTGAAAATCTTCCTTTGGAGTGTGGCTTATAGAAGCTTGAACACGGATGACAAAGTGCAAAGAAAGATGAAAAACTGGGTTCTATCCCCCTCGGGGTGCAGTCTTTGTTTAAAGGAGAGTGAGGATATCGATCACATTCTGTTACATTGTGAGTTTGCCACCAAGACTTGGAACTTCATTGCTGGTTTGTTGGGGCTAGCTTTCTATTTACCTAAAAAGGTGGATGATTGGCTCGAAGAAGGGTTGCAAGCTTGGAATTTGAGAAAGAAGGCCAAGGTGATAGCGGGCTGTGCGTTTAGAGCTTCCATGTGGCTTTTATGGAAAGAAAGAAATGCTAGAACCTTTGGTGATAAGTCGTCTTCTTTTGATTCTTTTTGTAATTCTGTACAAAATACGACCTCTTGGTGA

Coding sequence (CDS)

ATGAAAAAATCGCGATATTTCGGCGATATATCGCCGATATATCCAATTTCTCGAGGGTGCGATATGGATATGGGGGGTAAACTTGAATACGATAAAGGGGGAAGGGTTACTTTGGCCCAATCGGTCCTTAACAACCTCCCAATATACTTCTCCCTCCTTAAAGCCCCTATTGTGGTGATTAAGAAGTTAGAAAAGCTTACGAGAGACTTTATTTGGAATGGTGGCCATTATAAACCTGTTTGCAACCTTGTTAAATGGGAGTGGACAGTGTTGCCTACTTCCCATGGAGGTATTGGAGTGGGAGCTTTAGGCTTACGAAATACTGCCCTGTTAACCAAGTGGCTTTGGAGATTTGCCCACGAGAGAGAAGGCATCTGGAGGAGGGTTATTGGTAGCATTTATGGGACTGATAGTCTTGGTTGGAGAACAATAACTCTTCCTAAGAAAATGGGCAGAAGATTTTGGCCAAACATTCAGAGGAACTATGATAGTTTTGAGAAATTTACCAAATTCCAGATTAGCTATGGGAATAGAATAAGGTTCTGGAGTGATGCTTGGTGTGATATGCAGCCCCTTAAAGTTGTCTTCCCTGATTTATTCGAGATCTCCCATAAGAAATCTGCTTCTGTTGCAGAATGCTGGGAGGACAGCACCCAAACGTGGAACCTTGGCCTTCGAAGAGGGCTTTTTGACCGTGAGCTGAGTAGTTGGGTGGCCCTCATTGGCAAGTTAGACAACATCCGTATGGGACATGAGATGGACAAAATCACCTGGAAGTTGGAAGGCTCGGGGCTCTTTACTACTAAATCTTGGTTCAGCAGGTCGGTTGGTAAATCCCCCAAGATTAATCTGTCTCTTGCGGGCAAGATCTGGAAACACCAGTCTCCTAAGAAAGTGAAAATCTTCCTTTGGAGTGTGGCTTATAGAAGCTTGAACACGGATGACAAAGTGCAAAGAAAGATGAAAAACTGGGTTCTATCCCCCTCGGGGTGCAGTCTTTGTTTAAAGGAGAGTGAGGATATCGATCACATTCTGTTACATTGTGAGTTTGCCACCAAGACTTGGAACTTCATTGCTGGTTTGTTGGGGCTAGCTTTCTATTTACCTAAAAAGGTGGATGATTGGCTCGAAGAAGGGTTGCAAGCTTGGAATTTGAGAAAGAAGGCCAAGGTGATAGCGGGCTGTGCGTTTAGAGCTTCCATGTGGCTTTTATGGAAAGAAAGAAATGCTAGAACCTTTGGTGATAAGTCGTCTTCTTTTGATTCTTTTTGTAATTCTGTACAAAATACGACCTCTTGGTGA

Protein sequence

MKKSRYFGDISPIYPISRGCDMDMGGKLEYDKGGRVTLAQSVLNNLPIYFSLLKAPIVVIKKLEKLTRDFIWNGGHYKPVCNLVKWEWTVLPTSHGGIGVGALGLRNTALLTKWLWRFAHEREGIWRRVIGSIYGTDSLGWRTITLPKKMGRRFWPNIQRNYDSFEKFTKFQISYGNRIRFWSDAWCDMQPLKVVFPDLFEISHKKSASVAECWEDSTQTWNLGLRRGLFDRELSSWVALIGKLDNIRMGHEMDKITWKLEGSGLFTTKSWFSRSVGKSPKINLSLAGKIWKHQSPKKVKIFLWSVAYRSLNTDDKVQRKMKNWVLSPSGCSLCLKESEDIDHILLHCEFATKTWNFIAGLLGLAFYLPKKVDDWLEEGLQAWNLRKKAKVIAGCAFRASMWLLWKERNARTFGDKSSSFDSFCNSVQNTTSW
Homology
BLAST of Lcy04g006250 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.0e-29
Identity = 104/407 (25.55%), Postives = 173/407 (42.51%), Query Frame = 0

Query: 34  GRVTLAQSVLNNLPIY-FSLLKAPIVVIKKLEKLTRDFIWNGGHYKPVCNLVKWEWTVLP 93
           GR+TL ++VL+++P++  S +  P  ++ +L++L+R F+W     K   +LVKW     P
Sbjct: 36  GRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSP 95

Query: 94  TSHGGIGVGALGLRNTALLTKWLWRFAHEREGIWRRVIGSIYGTDSLGWRTITLPKKMGR 153
              GG+GV A    N AL++K  WR   E+  +W  V+   Y    +      +PK    
Sbjct: 96  KKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSWS 155

Query: 154 RFWPNIQRNY-DSFEKFTKFQISYGNRIRFWSDAWCDMQPL-------------KVVFPD 213
             W +I     D       +    G +IRFW+D W   +PL              VV  D
Sbjct: 156 STWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLLELDNGERPTDCDTVVAKD 215

Query: 214 LFEISHKKSASVAECWEDSTQTWNLGLRRGLFDRELSSWVALIGKLDNIRMGHEMDKITW 273
           L+     +    A+    +T    L LR  + D    +                 D+++W
Sbjct: 216 LW--IPGRGWDFAKIDPYTTNNTRLELRAVVLDLVTGA----------------RDRLSW 275

Query: 274 KLEGSGLFTTKSWFSR-SVGKSPKINL-SLAGKIWKHQSPKKVKIFLWSVAYRSLNTDDK 333
           K    G F+ +S +   +V + P+ N+ S    +WK + P++VK FLW V  +++ T+++
Sbjct: 276 KFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEE 335

Query: 334 VQRKMKNWVLSPSG-CSLCLKESEDIDHILLHCEFATKTWNFIAGLLGLAFYLPKKVDDW 393
             R+     LS S  C +C    E + H+L  C      W  +        +  K + +W
Sbjct: 336 RHRRH----LSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEW 395

Query: 394 LEEGLQAWNLRKKAKVIA-GCAFRASMWLLWKERNARTFGDKSSSFD 422
           L + L     R   + I     F   +W  WK R    FG+ +   D
Sbjct: 396 LYDNL---GDRSGCEDIPWSTIFAVIIWWGWKWRCGNIFGENTKCRD 417

BLAST of Lcy04g006250 vs. ExPASy TrEMBL
Match: M5X4S0 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa021750mg PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 7.1e-75
Identity = 147/389 (37.79%), Postives = 220/389 (56.56%), Query Frame = 0

Query: 32  KGGRVTLAQSVLNNLPIYF-SLLKAPIVVIKKLEKLTRDFIWNGGHYKPVCNLVKWEWTV 91
           KGGR+TL Q+VL+++P Y+ SL K PI V  K+E+L R+F+W G      C+LV+WE   
Sbjct: 525 KGGRLTLIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFLWEGLEEGKKCHLVRWERVT 584

Query: 92  LPTSHGGIGVGALGLRNTALLTKWLWRFAHEREGIWRRVIGSIYGTDSLGWRTITLPKKM 151
                GG+G+G+L  RN AL  KWLWRF  E   +W R+I S YG DS GW T  + K  
Sbjct: 585 KSKEEGGLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKRIDKVS 644

Query: 152 GRRFWPNIQRNYDSFEKFTKFQISYGNRIRFWSDAWCDMQPLKVVFPDLFEISHKKSASV 211
            R  W  I + Y+SF +  +F +  G +IRFW D W     LK +FP L  +S +K+ S+
Sbjct: 645 CRNPWREISKGYNSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSI 704

Query: 212 AECWEDS---TQTWNLGLRRGLFDRELSSWVALIGKLDNIRM-GHEMDKITWKLEGSGLF 271
           A C+ ++      W+   RR L + E++  V L+  L N+R+ G   D+ +W++E  G F
Sbjct: 705 A-CFANNHVLPLNWDFDFRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEVEEQGSF 764

Query: 272 TTKSWFSRSVGKSPKINLSLAGKIWKHQSPKKVKIFLWSVAYRSLNTDDKVQRKMKNWVL 331
           + KS+ S  +  +  +       IWK ++P K++ F+W  A   +NT D +QR+     L
Sbjct: 765 SCKSFRSFLLSTTRDV-FPPFSSIWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPKMCL 824

Query: 332 SPSGCSLCLKESEDIDHILLHCEFATKTWNFIAGLLGLAFYLPKKVDDWLEEGLQAWNLR 391
           SPS C LC + +E+IDH+ LHC ++ + W  + G LG+ + +PK   + L   L+     
Sbjct: 825 SPSWCVLCKENAENIDHLFLHCSYSLRLWWKMLGALGVEWVIPKGCFELLSINLRISGKG 884

Query: 392 KKAKVIAGCAFRASMWLLWKERNARTFGD 416
           K+A ++  C   A  W +W ERN R F D
Sbjct: 885 KRAGILRDCLVHAIFWNIWMERNQRIFQD 911

BLAST of Lcy04g006250 vs. ExPASy TrEMBL
Match: A0A438GDE7 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_4 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 1.6e-74
Identity = 149/404 (36.88%), Postives = 215/404 (53.22%), Query Frame = 0

Query: 33   GGRVTLAQSVLNNLPIYF-SLLKAPIVVIKKLEKLTRDFIWNGGHYKPVCNLVKWEWTVL 92
            GGR+TL QS L ++P YF SL K P  V  K+E++ RDF+W+G       +LV W+    
Sbjct: 1602 GGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDVVCK 1661

Query: 93   PTSHGGIGVGALGLRNTALLTKWLWRFAHEREGIWRRVIGSIYGTDSLGWRTITLPKKMG 152
            P S GG+G G + +RN ALL KWLWR+  E   +W +VI SIYG+ S GW    + +   
Sbjct: 1662 PKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSH 1721

Query: 153  RRFWPNIQRNYDSFEKFTKFQISYGNRIRFWSDAWCDMQPLKVVFPDLFEISHKKSASVA 212
            R  W  I   Y  F KFT+F +  G+RIRFW D W   QPL V +P L  +   K+A ++
Sbjct: 1722 RCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPIS 1781

Query: 213  ECWEDSTQ-TWNLGLRRGLFDRELSSWVALIGKLDNIRMGHEM-DKITWKLEGSGLFTTK 272
                 +   +WN   RR L D E+     L+   D + +   + DK +W L  SGLFT K
Sbjct: 1782 SILGSTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLHISSSVPDKRSWSLSSSGLFTVK 1841

Query: 273  SWFSRSVGKSPKINLSLAGKIWKHQSPKKVKIFLWSVAYRSLNTDDKVQRKMKNWVLSPS 332
            S+F      S    +     +W  Q P KVK F+W VA++ +NT+D +Q +     LSP 
Sbjct: 1842 SFFLALSQYSVSPPIFPTKFVWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALSPD 1901

Query: 333  GCSLCLKESEDIDHILLHCEFATKTWNFIAGLLGLAFYLPKKVDDWLEEGLQAWNLRKKA 392
             C LC+K  E +DH+ LHC      W+ +     + +  P+ + D L      +   K+ 
Sbjct: 1902 ICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLASNFNGFGFSKRG 1961

Query: 393  KVIAGCAFRASMWLLWKERNARTFGDKSSSFDSFCNSVQNTTSW 434
             V+   A  A MW++W+ERNAR F DK+ + +   +S+   TS+
Sbjct: 1962 IVLWQNACIALMWVVWRERNARIFEDKARNSEYLWDSICFLTSF 2005

BLAST of Lcy04g006250 vs. ExPASy TrEMBL
Match: A5BCI7 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_029474 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 1.6e-74
Identity = 150/404 (37.13%), Postives = 216/404 (53.47%), Query Frame = 0

Query: 33   GGRVTLAQSVLNNLPIYF-SLLKAPIVVIKKLEKLTRDFIWNGGHYKPVCNLVKWEWTVL 92
            GGR+TL QS L ++P YF SL K P  V  K+E++ RDF+W+G       +LV W+    
Sbjct: 1454 GGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDVVCK 1513

Query: 93   PTSHGGIGVGALGLRNTALLTKWLWRFAHEREGIWRRVIGSIYGTDSLGWRTITLPKKMG 152
            P S GG+G G + +RN ALL KWLWR+  E   +W +VI SIYG+ S GW    + +   
Sbjct: 1514 PKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSH 1573

Query: 153  RRFWPNIQRNYDSFEKFTKFQISYGNRIRFWSDAWCDMQPLKVVFPDLFEISHKKSASVA 212
            R  W  I   Y  F KFT+F +  G+RIRFW D W   QPL V +P L  +   K+A ++
Sbjct: 1574 RCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPIS 1633

Query: 213  ECWEDSTQ-TWNLGLRRGLFDRELSSWVALIGKLDNIRMGHEM-DKITWKLEGSGLFTTK 272
                 +   +WN   RR L D E+     L+  LD + +   + DK +W L  SGLFT K
Sbjct: 1634 SILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQSLDRLHISSSVPDKRSWFLSPSGLFTVK 1693

Query: 273  SWFSRSVGKSPKINLSLAGKIWKHQSPKKVKIFLWSVAYRSLNTDDKVQRKMKNWVLSPS 332
            S+F      S    +     +W  Q P KVK F+W VA++ +NT+D +Q +     LSP 
Sbjct: 1694 SFFLALSQYSESPTIFPTKFVWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALSPD 1753

Query: 333  GCSLCLKESEDIDHILLHCEFATKTWNFIAGLLGLAFYLPKKVDDWLEEGLQAWNLRKKA 392
             C LC+K  E +DH+ LHC      W+ +     + +  P+ + D L      +   K+ 
Sbjct: 1754 ICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLSSNFNGFGFSKRG 1813

Query: 393  KVIAGCAFRASMWLLWKERNARTFGDKSSSFDSFCNSVQNTTSW 434
             V+   A  A MW++W+ERNAR F DK+ + +   +S+   TS+
Sbjct: 1814 IVLWQNACIAIMWVVWRERNARIFEDKARNSEYLWDSICFLTSF 1857

BLAST of Lcy04g006250 vs. ExPASy TrEMBL
Match: A0A438K9P9 (CDP-diacylglycerol--serine O-phosphatidyltransferase 1 OS=Vitis vinifera OX=29760 GN=PSS1_1 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 2.1e-74
Identity = 149/404 (36.88%), Postives = 215/404 (53.22%), Query Frame = 0

Query: 33  GGRVTLAQSVLNNLPIYF-SLLKAPIVVIKKLEKLTRDFIWNGGHYKPVCNLVKWEWTVL 92
           GGR+TL QS L ++P YF SL K P  V  K+E++ RDF+W+G       +LV W+    
Sbjct: 575 GGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDVVCK 634

Query: 93  PTSHGGIGVGALGLRNTALLTKWLWRFAHEREGIWRRVIGSIYGTDSLGWRTITLPKKMG 152
           P S GG+G G + +RN ALL KWLWR+  E   +W +VI SIYG+ S GW    + +   
Sbjct: 635 PKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSH 694

Query: 153 RRFWPNIQRNYDSFEKFTKFQISYGNRIRFWSDAWCDMQPLKVVFPDLFEISHKKSASVA 212
           R  W  I   Y  F KFT+F +  G+RIRFW D W   QPL V +P L  +   K+A ++
Sbjct: 695 RCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPIS 754

Query: 213 ECWEDSTQ-TWNLGLRRGLFDRELSSWVALIGKLDNIRMGHEM-DKITWKLEGSGLFTTK 272
                +   +WN   RR L D E+     L+   D + +   + DK +W L  SGLFT K
Sbjct: 755 SILGSTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLHISSSVPDKRSWSLSPSGLFTVK 814

Query: 273 SWFSRSVGKSPKINLSLAGKIWKHQSPKKVKIFLWSVAYRSLNTDDKVQRKMKNWVLSPS 332
           S+F      S    +     +W  Q P KVK F+W VA++ +NT+D +Q +     LSP 
Sbjct: 815 SFFLALSQYSESPPIFPTKFVWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALSPD 874

Query: 333 GCSLCLKESEDIDHILLHCEFATKTWNFIAGLLGLAFYLPKKVDDWLEEGLQAWNLRKKA 392
            C LC+K  E +DH+ LHC      W+ +     + +  P+ + D L      +   K+ 
Sbjct: 875 ICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLASNFNGFGFSKRG 934

Query: 393 KVIAGCAFRASMWLLWKERNARTFGDKSSSFDSFCNSVQNTTSW 434
            V+   A  A MW++W+ERNAR F DK+ + +   +S+   TS+
Sbjct: 935 IVLWQNACIALMWVVWRERNARIFEDKARNSEYLWDSICFLTSF 978

BLAST of Lcy04g006250 vs. ExPASy TrEMBL
Match: M5XV38 (zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019854mg PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 3.5e-74
Identity = 145/387 (37.47%), Postives = 219/387 (56.59%), Query Frame = 0

Query: 32  KGGRVTLAQSVLNNLPIYF-SLLKAPIVVIKKLEKLTRDFIWNGGHYKPVCNLVKWEWTV 91
           KGGR+TL Q+VL+++P Y+ SL K PI V  K+E+L R+F+W G      C+LV+WE   
Sbjct: 39  KGGRLTLIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFLWEGLEEGKKCHLVRWERVT 98

Query: 92  LPTSHGGIGVGALGLRNTALLTKWLWRFAHEREGIWRRVIGSIYGTDSLGWRTITLPKKM 151
                GG+G+G+L  RN AL  KWLWRF  E   +W R+I S YG DS GW T  + K  
Sbjct: 99  KSKEEGGLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKRIDKVS 158

Query: 152 GRRFWPNIQRNYDSFEKFTKFQISYGNRIRFWSDAWCDMQPLKVVFPDLFEISHKKSASV 211
            R  W  I + Y+SF +  +F +  G +IRFW D W     LK +FP L  +S +K+ S+
Sbjct: 159 CRNPWREISKGYNSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSI 218

Query: 212 AECWEDS---TQTWNLGLRRGLFDRELSSWVALIGKLDNIRM-GHEMDKITWKLEGSGLF 271
           A C+ ++      W+   RR L + E++  V L+  L N+R+ G   D+ +W++E  G F
Sbjct: 219 A-CFANNHVLPLNWDFDFRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEVEEQGSF 278

Query: 272 TTKSWFSRSVGKSPKINLSLAGKIWKHQSPKKVKIFLWSVAYRSLNTDDKVQRKMKNWVL 331
           + KS+ S  +  +  +       IWK ++P K++ F+W  A   +NT D +QR+     L
Sbjct: 279 SCKSFRSFLLSTTRDV-FPPFSSIWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPKMCL 338

Query: 332 SPSGCSLCLKESEDIDHILLHCEFATKTWNFIAGLLGLAFYLPKKVDDWLEEGLQAWNLR 391
           SPS C LC + +E+IDH+ +HC ++ + W  + G LG+ + +PK   + L   L+     
Sbjct: 339 SPSWCVLCKENAENIDHLFIHCSYSLRLWWKMLGALGVEWVIPKGCFELLSINLRISGKG 398

Query: 392 KKAKVIAGCAFRASMWLLWKERNARTF 414
           K+A ++  C   A  W +W ERN R F
Sbjct: 399 KRAGILRDCLVHAIFWNIWMERNQRIF 423

BLAST of Lcy04g006250 vs. NCBI nr
Match: CAN65484.1 (hypothetical protein VITISV_029474 [Vitis vinifera])

HSP 1 Score: 290.0 bits (741), Expect = 3.3e-74
Identity = 150/404 (37.13%), Postives = 216/404 (53.47%), Query Frame = 0

Query: 33   GGRVTLAQSVLNNLPIYF-SLLKAPIVVIKKLEKLTRDFIWNGGHYKPVCNLVKWEWTVL 92
            GGR+TL QS L ++P YF SL K P  V  K+E++ RDF+W+G       +LV W+    
Sbjct: 1454 GGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDVVCK 1513

Query: 93   PTSHGGIGVGALGLRNTALLTKWLWRFAHEREGIWRRVIGSIYGTDSLGWRTITLPKKMG 152
            P S GG+G G + +RN ALL KWLWR+  E   +W +VI SIYG+ S GW    + +   
Sbjct: 1514 PKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSH 1573

Query: 153  RRFWPNIQRNYDSFEKFTKFQISYGNRIRFWSDAWCDMQPLKVVFPDLFEISHKKSASVA 212
            R  W  I   Y  F KFT+F +  G+RIRFW D W   QPL V +P L  +   K+A ++
Sbjct: 1574 RCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPIS 1633

Query: 213  ECWEDSTQ-TWNLGLRRGLFDRELSSWVALIGKLDNIRMGHEM-DKITWKLEGSGLFTTK 272
                 +   +WN   RR L D E+     L+  LD + +   + DK +W L  SGLFT K
Sbjct: 1634 SILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQSLDRLHISSSVPDKRSWFLSPSGLFTVK 1693

Query: 273  SWFSRSVGKSPKINLSLAGKIWKHQSPKKVKIFLWSVAYRSLNTDDKVQRKMKNWVLSPS 332
            S+F      S    +     +W  Q P KVK F+W VA++ +NT+D +Q +     LSP 
Sbjct: 1694 SFFLALSQYSESPTIFPTKFVWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALSPD 1753

Query: 333  GCSLCLKESEDIDHILLHCEFATKTWNFIAGLLGLAFYLPKKVDDWLEEGLQAWNLRKKA 392
             C LC+K  E +DH+ LHC      W+ +     + +  P+ + D L      +   K+ 
Sbjct: 1754 ICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLSSNFNGFGFSKRG 1813

Query: 393  KVIAGCAFRASMWLLWKERNARTFGDKSSSFDSFCNSVQNTTSW 434
             V+   A  A MW++W+ERNAR F DK+ + +   +S+   TS+
Sbjct: 1814 IVLWQNACIAIMWVVWRERNARIFEDKARNSEYLWDSICFLTSF 1857

BLAST of Lcy04g006250 vs. NCBI nr
Match: RVW70235.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 290.0 bits (741), Expect = 3.3e-74
Identity = 149/404 (36.88%), Postives = 215/404 (53.22%), Query Frame = 0

Query: 33   GGRVTLAQSVLNNLPIYF-SLLKAPIVVIKKLEKLTRDFIWNGGHYKPVCNLVKWEWTVL 92
            GGR+TL QS L ++P YF SL K P  V  K+E++ RDF+W+G       +LV W+    
Sbjct: 1602 GGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDVVCK 1661

Query: 93   PTSHGGIGVGALGLRNTALLTKWLWRFAHEREGIWRRVIGSIYGTDSLGWRTITLPKKMG 152
            P S GG+G G + +RN ALL KWLWR+  E   +W +VI SIYG+ S GW    + +   
Sbjct: 1662 PKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSH 1721

Query: 153  RRFWPNIQRNYDSFEKFTKFQISYGNRIRFWSDAWCDMQPLKVVFPDLFEISHKKSASVA 212
            R  W  I   Y  F KFT+F +  G+RIRFW D W   QPL V +P L  +   K+A ++
Sbjct: 1722 RCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPIS 1781

Query: 213  ECWEDSTQ-TWNLGLRRGLFDRELSSWVALIGKLDNIRMGHEM-DKITWKLEGSGLFTTK 272
                 +   +WN   RR L D E+     L+   D + +   + DK +W L  SGLFT K
Sbjct: 1782 SILGSTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLHISSSVPDKRSWSLSSSGLFTVK 1841

Query: 273  SWFSRSVGKSPKINLSLAGKIWKHQSPKKVKIFLWSVAYRSLNTDDKVQRKMKNWVLSPS 332
            S+F      S    +     +W  Q P KVK F+W VA++ +NT+D +Q +     LSP 
Sbjct: 1842 SFFLALSQYSVSPPIFPTKFVWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALSPD 1901

Query: 333  GCSLCLKESEDIDHILLHCEFATKTWNFIAGLLGLAFYLPKKVDDWLEEGLQAWNLRKKA 392
             C LC+K  E +DH+ LHC      W+ +     + +  P+ + D L      +   K+ 
Sbjct: 1902 ICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLASNFNGFGFSKRG 1961

Query: 393  KVIAGCAFRASMWLLWKERNARTFGDKSSSFDSFCNSVQNTTSW 434
             V+   A  A MW++W+ERNAR F DK+ + +   +S+   TS+
Sbjct: 1962 IVLWQNACIALMWVVWRERNARIFEDKARNSEYLWDSICFLTSF 2005

BLAST of Lcy04g006250 vs. NCBI nr
Match: RVX17938.1 (CDP-diacylglycerol--serine O-phosphatidyltransferase 1 [Vitis vinifera])

HSP 1 Score: 289.7 bits (740), Expect = 4.3e-74
Identity = 149/404 (36.88%), Postives = 215/404 (53.22%), Query Frame = 0

Query: 33  GGRVTLAQSVLNNLPIYF-SLLKAPIVVIKKLEKLTRDFIWNGGHYKPVCNLVKWEWTVL 92
           GGR+TL QS L ++P YF SL K P  V  K+E++ RDF+W+G       +LV W+    
Sbjct: 575 GGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDVVCK 634

Query: 93  PTSHGGIGVGALGLRNTALLTKWLWRFAHEREGIWRRVIGSIYGTDSLGWRTITLPKKMG 152
           P S GG+G G + +RN ALL KWLWR+  E   +W +VI SIYG+ S GW    + +   
Sbjct: 635 PKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSH 694

Query: 153 RRFWPNIQRNYDSFEKFTKFQISYGNRIRFWSDAWCDMQPLKVVFPDLFEISHKKSASVA 212
           R  W  I   Y  F KFT+F +  G+RIRFW D W   QPL V +P L  +   K+A ++
Sbjct: 695 RCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPIS 754

Query: 213 ECWEDSTQ-TWNLGLRRGLFDRELSSWVALIGKLDNIRMGHEM-DKITWKLEGSGLFTTK 272
                +   +WN   RR L D E+     L+   D + +   + DK +W L  SGLFT K
Sbjct: 755 SILGSTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLHISSSVPDKRSWSLSPSGLFTVK 814

Query: 273 SWFSRSVGKSPKINLSLAGKIWKHQSPKKVKIFLWSVAYRSLNTDDKVQRKMKNWVLSPS 332
           S+F      S    +     +W  Q P KVK F+W VA++ +NT+D +Q +     LSP 
Sbjct: 815 SFFLALSQYSESPPIFPTKFVWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALSPD 874

Query: 333 GCSLCLKESEDIDHILLHCEFATKTWNFIAGLLGLAFYLPKKVDDWLEEGLQAWNLRKKA 392
            C LC+K  E +DH+ LHC      W+ +     + +  P+ + D L      +   K+ 
Sbjct: 875 ICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLASNFNGFGFSKRG 934

Query: 393 KVIAGCAFRASMWLLWKERNARTFGDKSSSFDSFCNSVQNTTSW 434
            V+   A  A MW++W+ERNAR F DK+ + +   +S+   TS+
Sbjct: 935 IVLWQNACIALMWVVWRERNARIFEDKARNSEYLWDSICFLTSF 978

BLAST of Lcy04g006250 vs. NCBI nr
Match: TQD93576.1 (hypothetical protein C1H46_020784 [Malus baccata])

HSP 1 Score: 288.5 bits (737), Expect = 9.6e-74
Identity = 152/388 (39.18%), Postives = 207/388 (53.35%), Query Frame = 0

Query: 32  KGGRVTLAQSVLNNLPIYF-SLLKAPIVVIKKLEKLTRDFIWNGGHYKPVCNLVKWEWTV 91
           +GGR+TL QSVL +LPIY+ SL K P  VI +LEKL + F+W G       +LVKWE  +
Sbjct: 81  RGGRLTLIQSVLGSLPIYYMSLFKIPCGVIGRLEKLMKGFLWEGVEEGKKNHLVKWEIVI 140

Query: 92  LPTSHGGIGVGALGLRNTALLTKWLWRFAHEREGIWRRVIGSIYGTDSLGWRTITLPKKM 151
                GG+GVG L  RN ALL KWLWRF  E   +W +VI S YG  + GW      +  
Sbjct: 141 KSKEEGGLGVGNLRNRNEALLAKWLWRFPKEPHSLWHKVIRSKYGLQNNGWNAFPPMRGS 200

Query: 152 GRRFWPNIQRNYDSFEKFTKFQISYGNRIRFWSDAWCDMQPLKVVFPDLFEISHKKSASV 211
            R  W +I      F    KF++  G R+RFW D W +  PLK  FP LF +S   + ++
Sbjct: 201 SRSPWKDISSGSQLFLHCCKFEVGNGERVRFWEDGWLEGGPLKEQFPRLFLLSRMHNQNI 260

Query: 212 AECWEDSTQ--TWNLGLRRGLFDRELSSWVALIGKLDNIRMGH-EMDKITWKLEGSGLFT 271
           +   + ST   +WN   RR L + E+     L+ K++ +R+     D   WKLE S LFT
Sbjct: 261 SSFADFSTNSLSWNFDFRRNLNEAEIEEAARLLQKVEEVRLSQSRTDNRRWKLEASRLFT 320

Query: 272 TKSWFSRSVGKSPKINLSLAGKIWKHQSPKKVKIFLWSVAYRSLNTDDKVQRKMKNWVLS 331
            KS+ S               +IWK + P KVKI +W VA   LNT D++QR+     LS
Sbjct: 321 CKSYRSFLSNNGIMQYFPPYSQIWKSKVPPKVKILVWLVAKGKLNTCDQIQRRSHFICLS 380

Query: 332 PSGCSLCLKESEDIDHILLHCEFATKTWNFIAGLLGLAFYLPKKVDDWLEEGLQAWNLRK 391
           P  CSLC  + E ++HI LHC +  + W  +   +  ++ +PK   + L    QA  + +
Sbjct: 381 PHWCSLCKAKEESVNHIFLHCSYTIQLWWKLFQEVRASWVIPKGCFELLSTKFQALGIGR 440

Query: 392 KAKVIAGCAFRASMWLLWKERNARTFGD 416
           KAKV+ GC   A  W +W ERN R F D
Sbjct: 441 KAKVLWGCLVSAVFWNIWLERNKRIFED 468

BLAST of Lcy04g006250 vs. NCBI nr
Match: RVW25634.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 288.5 bits (737), Expect = 9.6e-74
Identity = 147/398 (36.93%), Postives = 211/398 (53.02%), Query Frame = 0

Query: 33   GGRVTLAQSVLNNLPIYF-SLLKAPIVVIKKLEKLTRDFIWNGGHYKPVCNLVKWEWTVL 92
            GGR+TL QS L ++P YF SL K P  V  K+E++ RDF+W+G       +LV W+    
Sbjct: 680  GGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDVVCK 739

Query: 93   PTSHGGIGVGALGLRNTALLTKWLWRFAHEREGIWRRVIGSIYGTDSLGWRTITLPKKMG 152
            P S GG+G G + +RN ALL KWLWR+  E   +W +VI SIYG+ S GW      +   
Sbjct: 740  PKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNTVRWSH 799

Query: 153  RRFWPNIQRNYDSFEKFTKFQISYGNRIRFWSDAWCDMQPLKVVFPDLFEISHKKSASVA 212
            R  W  I   Y  F KFT+F +  G+RIRFW D W   QPL V +P L  +   K+A ++
Sbjct: 800  RCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPIS 859

Query: 213  ECWEDSTQ-TWNLGLRRGLFDRELSSWVALIGKLDNIRMGHEM-DKITWKLEGSGLFTTK 272
                 +   +WN   RR L D E+     L+   D + +   + DK +W L  SGLFT K
Sbjct: 860  SILGSTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLHISSSVPDKRSWSLSSSGLFTVK 919

Query: 273  SWFSRSVGKSPKINLSLAGKIWKHQSPKKVKIFLWSVAYRSLNTDDKVQRKMKNWVLSPS 332
            S+F      S    +     +W  Q P KVK F+W VA++ +NT+D +Q +     LSP 
Sbjct: 920  SFFLALSQYSVSPPIFPTKFVWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALSPD 979

Query: 333  GCSLCLKESEDIDHILLHCEFATKTWNFIAGLLGLAFYLPKKVDDWLEEGLQAWNLRKKA 392
             C LC+K  E +DH+ LHC      W+ +     + +  P+ + D L      +   K+ 
Sbjct: 980  ICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLASNFNGFGFSKRG 1039

Query: 393  KVIAGCAFRASMWLLWKERNARTFGDKSSSFDSFCNSV 428
             V+   A  A MW++W+ERNAR F DK+ + +   +S+
Sbjct: 1040 IVLWQNACIALMWVVWRERNARIFEDKARNSEYLWDSI 1077

BLAST of Lcy04g006250 vs. TAIR 10
Match: AT1G60720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-09
Identity = 52/250 (20.80%), Postives = 99/250 (39.60%), Query Frame = 0

Query: 166 EKFTKFQISYGNRIRFWSDAWCDMQPLKVVFPDLFEISHKKSASVAECWEDSTQTWNLGL 225
           E+F K  +  G    FW D+W  + PL  V  D    S +   +           W L L
Sbjct: 10  EQFVKCNLGNGRIAHFWHDSWTSLGPLIKVMGDYGSRSLRIPLNARVVEALGVNGWKLPL 69

Query: 226 RRGLFDRELSSWVALIGKLDNIRMGHEMDKITWKLEGSGLFTTKSWFSRSVGKSPKINLS 285
            R    + +   ++ I       +    D +   +   G  + ++W      ++P+++ +
Sbjct: 70  SRSAPAQAIHDHISTITTPSPATIEDSFDWVVGGVVCQGFSSARTW-DAIRPRAPELDWA 129

Query: 286 LAGKIWKHQSPKKVKIFLWSVAYRSLNTDDKVQRKMKNW-VLSPSGCSLCLKESEDIDHI 345
            A  +W   +  K    +W      L T    ++++ +W  +    C LC  E+E  DH+
Sbjct: 130 KA--VWFKGAVPKHAFNMWISQLDRLPT----RQRLASWGHIQSFDCCLCTIETESRDHL 189

Query: 346 LLHCEFATKTWNFIAGLLGLAFYLPKK--VDDWLEEGLQAW---NLRKKAKVIAGCAFRA 405
           L  CEFA + W      L  +   P++     W E  L +W   +      ++   +  A
Sbjct: 190 LFSCEFAAQVWR-----LAFSRLCPRQRLFCSWAE--LLSWMRSSSSSAPSLLRKVSAHA 245

Query: 406 SMWLLWKERN 410
            ++ +W++RN
Sbjct: 250 IIYNIWRQRN 245

BLAST of Lcy04g006250 vs. TAIR 10
Match: AT5G18880.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 60.1 bits (144), Expect = 5.2e-09
Identity = 65/278 (23.38%), Postives = 105/278 (37.77%), Query Frame = 0

Query: 164 SFEKFTKFQISYGNRIRFWSDAWCDMQPLKVVF--PDLFEISHKKSASVAECWEDSTQTW 223
           S  +F +  +  G    FW DAW D   L          ++  ++ A V E   +    W
Sbjct: 7   SIVEFMRCDMGNGESASFWYDAWTDFGQLLTFLGAAGPRQLRIRQDARVVEASRNG--DW 66

Query: 224 NLGLRRGLFDRELSSWVALIGKLDNIRMGHE---MDKITWK-LEGSGL--FTTKSWFSRS 283
            L   R        +    +  L    + HE    D   W+   GS L  F+++  + + 
Sbjct: 67  FLPAARS------DNSQLFLAALTMAPVPHESRGQDSFLWRNAAGSYLPSFSSRDTWEQI 126

Query: 284 VGKSPKINLSLAGKIWKHQSPKKVKIFLWSVAYRSLNTDDKVQRKMKNWVLS-PSGCSLC 343
              SP +    A  +W  +   +  +  W      L T D    +++ W ++ PS   LC
Sbjct: 127 RVHSPTV--PWAKVVWFKEYIPRFSLITWMSFLERLPTRD----RLRGWGMNIPSSWVLC 186

Query: 344 LKESEDIDHILLHCEFATKTWNFIAGLL--GLAFYLPKKVDDWLEEGLQAWNLRKKAKVI 403
               E   H+   C F+   W F A        F LP     W+ +      LR  +  I
Sbjct: 187 SNGDETHAHLFFECSFSLAIWEFFASKFRPSPPFGLP-AASSWILQ----LPLRSHSTTI 246

Query: 404 AGCAFRASMWLLWKERNARTFGDKSSSFDSFCNSVQNT 431
                +++++ +WKERNAR F   SSS  S   ++  T
Sbjct: 247 LKLLLQSAVYHVWKERNARIFTSISSSASSLRLAIDRT 265

BLAST of Lcy04g006250 vs. TAIR 10
Match: AT1G33710.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 52.4 bits (124), Expect = 1.1e-06
Identity = 40/171 (23.39%), Postives = 76/171 (44.44%), Query Frame = 0

Query: 244 LDNIRMGHEMDKITWKLEG---SGLFTTKSWFSRSVGKSPKIN-LSLAGKIWKHQSPKKV 303
           +D   +  E+D   W +E    +G  + K+W        P+ + +S A  +W   +  K 
Sbjct: 6   IDLPTLSGELDVYDWVVEDKLCNGFSSAKTW----AALRPRSDVVSWAKTVWFKGATPKH 65

Query: 304 KIFLWSVAYRSLNTDDKVQRKMKNWVLS-PSGCSLCLKESEDIDHILLHCEFATKTWNFI 363
              +W      L T    + ++ +W +   + C LC  + ED DH+ L CEFA   W+ +
Sbjct: 66  AFHMWVTNLDRLPT----KTRLASWGMQLQTTCGLCSLDIEDRDHLFLTCEFACFLWHTV 125

Query: 364 AGLLGLAFYLPKKVDDWLEEGLQAWNLRKKAKVIAGCAFRASMWLLWKERN 410
           +  L L  +     +D ++  LQ    R+    +     ++ ++ +WK+RN
Sbjct: 126 SVRLELPAFSFVVWNDLMDWTLQ--RNRRSPPTLRKLIVQSVLYAIWKQRN 166

BLAST of Lcy04g006250 vs. TAIR 10
Match: AT1G45063.1 (copper ion binding;electron carriers )

HSP 1 Score: 45.8 bits (107), Expect = 1.0e-04
Identity = 28/93 (30.11%), Postives = 41/93 (44.09%), Query Frame = 0

Query: 328 PSGCSLCLKESEDIDHILLHCEFATKTWNFIAGLLGLAFYLPKKVDD---WLEEGLQAWN 387
           PS C LC    E   H+   C F+ + W+F           P+   D   WL    +   
Sbjct: 281 PSLCLLCNALDETRQHVFFDCPFSHEVWSFFCS--NARVTPPRMFKDSARWLRHPCR--- 340

Query: 388 LRKKAKVIAGCAFRASMWLLWKERNARTFGDKS 418
             KK   I   A++AS++ +W+ERN R   +KS
Sbjct: 341 -DKKVAFILKLAYQASVYHIWRERNIRLNSNKS 367

BLAST of Lcy04g006250 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.3e-04
Identity = 40/153 (26.14%), Postives = 60/153 (39.22%), Query Frame = 0

Query: 46  LPIY-FSLLKAPIVVIKKLEKLTRDFIWNGGHYKPVCNLVKWE-WTVLPTSHGGIGVGAL 105
           LP+Y  S  +   ++ KKL     +F W+    K   + V W+         GG+G   L
Sbjct: 3   LPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDL 62

Query: 106 GLRNTALLTKWLWRFAHEREGIWRRVIGSIYGTDSLGWRTITLPKKMGRR---FWPNIQR 165
           G  N ALL K  +R  H+   +  R++ S Y   S       +   +G R    W +I  
Sbjct: 63  GWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHS-----SMMECSVGTRPSYAWRSIIH 122

Query: 166 NYDSFEKFTKFQISYGNRIRFWSDAW-CDMQPL 193
             +   +     I  G   + W D W  D  PL
Sbjct: 123 GRELLSRGLLRTIGDGIHTKVWLDRWIMDETPL 150

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0C2F62.0e-2925.55Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
M5X4S07.1e-7537.79Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... [more]
A0A438GDE71.6e-7436.88LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_... [more]
A5BCI71.6e-7437.13Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI... [more]
A0A438K9P92.1e-7436.88CDP-diacylglycerol--serine O-phosphatidyltransferase 1 OS=Vitis vinifera OX=2976... [more]
M5XV383.5e-7437.47zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019854mg ... [more]
Match NameE-valueIdentityDescription
CAN65484.13.3e-7437.13hypothetical protein VITISV_029474 [Vitis vinifera][more]
RVW70235.13.3e-7436.88LINE-1 retrotransposable element ORF2 protein [Vitis vinifera][more]
RVX17938.14.3e-7436.88CDP-diacylglycerol--serine O-phosphatidyltransferase 1 [Vitis vinifera][more]
TQD93576.19.6e-7439.18hypothetical protein C1H46_020784 [Malus baccata][more]
RVW25634.19.6e-7436.93putative ribonuclease H protein [Vitis vinifera][more]
Match NameE-valueIdentityDescription
AT1G60720.11.4e-0920.80RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT5G18880.15.2e-0923.38RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT1G33710.11.1e-0623.39RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT1G45063.11.0e-0430.11copper ion binding;electron carriers [more]
ATMG00310.11.3e-0426.14RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 266..355
e-value: 4.7E-16
score: 59.3
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 32..379
NoneNo IPR availablePANTHERPTHR33116:SF33OS01G0885550 PROTEINcoord: 32..379

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g006250.1Lcy04g006250.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0110165 cellular anatomical entity